AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280006938.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280006938.01.T01 MTR_2g017920 92.784 97 7 0 1 97 1 97 1.02e-57 178
MsG0280006938.01.T02 MTR_2g017920 92.784 97 7 0 1 97 1 97 1.02e-57 178
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280006938.01.T01 AT3G29170 64.948 97 29 3 1 92 1 97 6.33e-21 84.7
MsG0280006938.01.T01 AT3G29170 64.948 97 29 3 1 92 1 97 6.33e-21 84.7
MsG0280006938.01.T02 AT3G29170 64.948 97 29 3 1 92 1 97 6.33e-21 84.7
MsG0280006938.01.T02 AT3G29170 64.948 97 29 3 1 92 1 97 6.33e-21 84.7

Find 57 sgRNAs with CRISPR-Local

Find 322 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCACTCTTCCTGTTGTTTCT+TGG 0.192760 2:-8263276 MsG0280006938.01.T01:CDS
TTTCGTACACATGTAATATT+AGG 0.252453 2:-8263638 MsG0280006938.01.T01:intron
TGAGAATATAAAACGGAAAA+AGG 0.280444 2:+8263923 None:intergenic
GTCCTATGTCTTTGGTTCAT+AGG 0.287228 2:+8263734 None:intergenic
TTGAGTGCAAAATGAGAATT+AGG 0.299002 2:-8263810 MsG0280006938.01.T01:intron
TTCCTGTTGTTTCTTGGTAC+TGG 0.301691 2:-8263270 MsG0280006938.01.T01:CDS
TTGCGACAAAGGTAAGAAAT+TGG 0.302756 2:-8264137 MsG0280006938.01.T02:five_prime_UTR
AATGTTGTGTCCTATGTCTT+TGG 0.304123 2:+8263726 None:intergenic
GCTTATGGCCTTCTAGCATT+AGG 0.311927 2:-8263189 MsG0280006938.01.T01:CDS
TTGAATGTAATCACGTGTTT+TGG 0.332800 2:-8263661 MsG0280006938.01.T01:intron
TTATATTCTCAGATTCATTC+AGG 0.334700 2:-8263911 MsG0280006938.01.T01:intron
TGCAAGGGCAATAGATTTCC+AGG 0.357241 2:+8263296 None:intergenic
GAACTCAGAAATATTTGATA+TGG 0.357772 2:-8263436 MsG0280006938.01.T01:exon
GGAGAACGCTCTCAAGCTTA+TGG 0.407602 2:-8263204 MsG0280006938.01.T01:CDS
AGGATTTCTGAGCTTCCTCC+AGG 0.449829 2:-8263169 MsG0280006938.01.T01:intron
TGGCGGCTGATAACGAATTC+CGG 0.451983 2:+8263987 None:intergenic
GGAACTCTGTCCAAGGCTCT+TGG 0.459555 2:+8263318 None:intergenic
TCAGAAATCCTAATGCTAGA+AGG 0.461382 2:+8263181 None:intergenic
GTCCAGTACCAAGAAACAAC+AGG 0.478983 2:+8263268 None:intergenic
TAATCAAATCGAGGGTCAAA+TGG 0.486596 2:+8263345 None:intergenic
AGGAATGGATGAGGAAAACC+TGG 0.489915 2:+8263943 None:intergenic
CAAAGCCAAAGTGGAAAAGA+TGG 0.490050 2:+8264064 None:intergenic
TGATTACACACCAAGAGCCT+TGG 0.499077 2:-8263328 MsG0280006938.01.T01:CDS
GCTGTGTTTATTTGAGCCGA+GGG 0.512700 2:-8263501 MsG0280006938.01.T01:five_prime_UTR
CATCCTCATCTGTGGCAAGA+GGG 0.516381 2:+8263391 None:intergenic
GAAACAACAGGAAGAGTGCA+AGG 0.526346 2:+8263280 None:intergenic
GGCTGTGTTTATTTGAGCCG+AGG 0.535343 2:-8263502 MsG0280006938.01.T01:five_prime_UTR
AATTCTGATAGAAATTGTGT+TGG 0.537635 2:-8263759 MsG0280006938.01.T01:intron
GAAATTGGTAAAATTATGAC+GGG 0.539361 2:-8264122 MsG0280006938.01.T02:five_prime_UTR
TTATCAGCCGCCAGAAACAC+CGG 0.543339 2:-8263977 MsG0280006938.01.T01:five_prime_UTR
CAATGAAGAAATTTCAGCAA+TGG 0.552245 2:+8264157 None:intergenic
AGAAATTGGTAAAATTATGA+CGG 0.552391 2:-8264123 MsG0280006938.01.T02:five_prime_UTR
AAATTTCTTCATTGCGACAA+AGG 0.563414 2:-8264148 MsG0280006938.01.T02:five_prime_UTR
ATGAATCTGAGAATATAAAA+CGG 0.563869 2:+8263916 None:intergenic
GAGCCTTGGACAGAGTTCCC+TGG 0.576818 2:-8263314 MsG0280006938.01.T01:CDS
ATCCTCATCTGTGGCAAGAG+GGG 0.579989 2:+8263392 None:intergenic
TATCATATACAAAGCCAAAG+TGG 0.581481 2:+8264055 None:intergenic
GAAAATCGTAGGAGCAAGCA+AGG 0.590931 2:-8263458 MsG0280006938.01.T01:five_prime_UTR
AAGTCGCCAGAAAACGCAGC+CGG 0.604726 2:-8264006 MsG0280006938.01.T01:five_prime_UTR
CGTAGCTGTAATTCTAACAC+GGG 0.607384 2:-8263523 MsG0280006938.01.T01:five_prime_UTR
TCATCCTCATCTGTGGCAAG+AGG 0.609309 2:+8263390 None:intergenic
CACCCCTCTTGCCACAGATG+AGG 0.620897 2:-8263394 MsG0280006938.01.T01:CDS
AAACAACAGGAAGAGTGCAA+GGG 0.621765 2:+8263281 None:intergenic
TACAGCTACGACTAAGCACA+AGG 0.623151 2:+8263536 None:intergenic
TGTGTTTATTTGAGCCGAGG+GGG 0.628105 2:-8263499 MsG0280006938.01.T01:five_prime_UTR
CTTGGTGTGTAATCAAATCG+AGG 0.631421 2:+8263336 None:intergenic
TCGTAGCTGTAATTCTAACA+CGG 0.637497 2:-8263524 MsG0280006938.01.T01:five_prime_UTR
TTTCCAGGGAACTCTGTCCA+AGG 0.638212 2:+8263311 None:intergenic
AACGTAATCATCCTCATCTG+TGG 0.648920 2:+8263383 None:intergenic
CTGTGTTTATTTGAGCCGAG+GGG 0.653999 2:-8263500 MsG0280006938.01.T01:five_prime_UTR
AGCCTATGAACCAAAGACAT+AGG 0.656096 2:-8263736 MsG0280006938.01.T01:intron
TTGGTGTGTAATCAAATCGA+GGG 0.657279 2:+8263337 None:intergenic
GCAAGGGCAATAGATTTCCA+GGG 0.694017 2:+8263297 None:intergenic
ACAGATGAGGATGATTACGT+TGG 0.696064 2:-8263381 MsG0280006938.01.T01:CDS
ACAGCTACGACTAAGCACAA+GGG 0.733846 2:+8263537 None:intergenic
GGAATGGATGAGGAAAACCT+GGG 0.740049 2:+8263944 None:intergenic
ATGGATGAGGAAAACCTGGG+CGG 0.761931 2:+8263947 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAAATAAAATTGTACAAT+GGG - Chr2:8261505-8261524 MsG0280006938.01.T01:intron 10.0%
!! TTTAATTAATATAAACATCA+GGG - Chr2:8260377-8260396 MsG0280006938.01.T01:intron 10.0%
!! AGTTACTTAAAAAATTTCAT+TGG - Chr2:8262348-8262367 MsG0280006938.01.T01:intron 15.0%
!! GATTAAATAAAATTGTACAA+TGG - Chr2:8261504-8261523 MsG0280006938.01.T01:intron 15.0%
!! GTTTAATTAATATAAACATC+AGG - Chr2:8260376-8260395 MsG0280006938.01.T01:intron 15.0%
!! TAATATATAAATTGTTCCAT+TGG - Chr2:8263666-8263685 MsG0280006938.01.T01:intron 15.0%
!! TTAAATAAAATTGTACAATG+GGG - Chr2:8261506-8261525 MsG0280006938.01.T01:intron 15.0%
!! TTAAGTAACTTATTACTTAA+AGG + Chr2:8262338-8262357 None:intergenic 15.0%
!! TTTCAATGAATCATAAAAAA+TGG - Chr2:8260682-8260701 MsG0280006938.01.T01:intron 15.0%
!!! TTTTTTTTTTTTTAACCGAT+GGG - Chr2:8261997-8262016 MsG0280006938.01.T01:intron 15.0%
!!! TTTTTTTTTTTTTTAACCGA+TGG - Chr2:8261996-8262015 MsG0280006938.01.T01:intron 15.0%
!! AATGAAAGATAGTATTAAGT+TGG + Chr2:8262571-8262590 None:intergenic 20.0%
!! AGAAATTGGTAAAATTATGA+CGG - Chr2:8259338-8259357 MsG0280006938.01.T01:CDS 20.0%
!! ATGAAAGATAGTATTAAGTT+GGG + Chr2:8262570-8262589 None:intergenic 20.0%
!! ATGAATCTGAGAATATAAAA+CGG + Chr2:8259548-8259567 None:intergenic 20.0%
!! ATGATTCATTGAAAAGATAA+TGG + Chr2:8260676-8260695 None:intergenic 20.0%
!! ATGTTAAGAACAAAATTAAC+TGG + Chr2:8262308-8262327 None:intergenic 20.0%
!! GAAAAAATAACATACAAAGA+AGG - Chr2:8262150-8262169 MsG0280006938.01.T01:intron 20.0%
!! TAGATCATATGAAATACTTA+AGG + Chr2:8262605-8262624 None:intergenic 20.0%
!! TGATTCCACATAATTAAAAT+AGG + Chr2:8261674-8261693 None:intergenic 20.0%
!! TGTATTCAGAAATCAATATA+AGG + Chr2:8261336-8261355 None:intergenic 20.0%
!! TTAAAACAAATAATCTCCTA+TGG + Chr2:8263457-8263476 None:intergenic 20.0%
!!! AAAAAATGGTTCTAATGTAA+TGG - Chr2:8260696-8260715 MsG0280006938.01.T01:intron 20.0%
!!! AAAAGATAATGGTACATATA+AGG + Chr2:8260665-8260684 None:intergenic 20.0%
!!! GTTAAATAACTCAAACTTTT+TGG - Chr2:8261053-8261072 MsG0280006938.01.T01:intron 20.0%
!!! TATATTTTTATTTTCCAGTG+TGG - Chr2:8263061-8263080 MsG0280006938.01.T01:intron 20.0%
!!! TTATATTGATTTCTGAATAC+AGG - Chr2:8261335-8261354 MsG0280006938.01.T01:intron 20.0%
!!! TTTTTTTTTTTTAACCGATG+GGG - Chr2:8261998-8262017 MsG0280006938.01.T01:intron 20.0%
! AAATTTCATTGGAAGATGTT+AGG - Chr2:8262359-8262378 MsG0280006938.01.T01:intron 25.0%
! AACATATAGATCATGTAAAC+TGG - Chr2:8262430-8262449 MsG0280006938.01.T01:intron 25.0%
! AATGTTAAGACACTATCTTA+TGG + Chr2:8262509-8262528 None:intergenic 25.0%
! AATTCTGATAGAAATTGTGT+TGG - Chr2:8259702-8259721 MsG0280006938.01.T01:CDS 25.0%
! AGAAAAATAAACCAGCATAT+TGG - Chr2:8260531-8260550 MsG0280006938.01.T01:intron 25.0%
! AGACAAAAACTAAAAGGAAT+TGG + Chr2:8263846-8263865 None:intergenic 25.0%
! AGCTAAAGAACAAATAAAAC+AGG + Chr2:8261213-8261232 None:intergenic 25.0%
! ATATAAAACGGAAAAAGGAA+TGG + Chr2:8259536-8259555 None:intergenic 25.0%
! ATCAATAGTTATTGTTGAAG+TGG - Chr2:8261077-8261096 MsG0280006938.01.T01:intron 25.0%
! ATCATCAAAACTTAATCTAG+AGG - Chr2:8263702-8263721 MsG0280006938.01.T01:intron 25.0%
! ATCTGTAATACTTTAATCCT+AGG + Chr2:8260910-8260929 None:intergenic 25.0%
! ATGTTATGCTATATACATCA+AGG - Chr2:8260466-8260485 MsG0280006938.01.T01:intron 25.0%
! ATTAAAATAGGCTCAGTTTA+AGG + Chr2:8261662-8261681 None:intergenic 25.0%
! CTTAACATTCAAAACTGAAT+TGG - Chr2:8262520-8262539 MsG0280006938.01.T01:intron 25.0%
! CTTTAGCAAAATCATCTTTA+TGG + Chr2:8260493-8260512 None:intergenic 25.0%
! GAAATTGGTAAAATTATGAC+GGG - Chr2:8259339-8259358 MsG0280006938.01.T01:CDS 25.0%
! GAACTCAGAAATATTTGATA+TGG - Chr2:8260025-8260044 MsG0280006938.01.T01:intron 25.0%
! GATAACAAGATTAATTCCAA+TGG + Chr2:8263685-8263704 None:intergenic 25.0%
! GATAAGTTTATCAAGTTCAA+AGG + Chr2:8263482-8263501 None:intergenic 25.0%
! TAACATATTTGATCTAGTGA+GGG - Chr2:8263788-8263807 MsG0280006938.01.T01:intron 25.0%
! TAACTTTATCCAAGATAAGA+GGG - Chr2:8262695-8262714 MsG0280006938.01.T01:intron 25.0%
! TACTATGACAAAGGAAATAA+AGG + Chr2:8263583-8263602 None:intergenic 25.0%
! TATAATTGCACATGATAGAT+AGG - Chr2:8260816-8260835 MsG0280006938.01.T01:intron 25.0%
! TATCATGTGCAATTATACTT+TGG + Chr2:8260813-8260832 None:intergenic 25.0%
! TCAATAGTTATTGTTGAAGT+GGG - Chr2:8261078-8261097 MsG0280006938.01.T01:intron 25.0%
! TCTGTAATACTTTAATCCTA+GGG + Chr2:8260909-8260928 None:intergenic 25.0%
! TGAGAATATAAAACGGAAAA+AGG + Chr2:8259541-8259560 None:intergenic 25.0%
! TTAACTTTATCCAAGATAAG+AGG - Chr2:8262694-8262713 MsG0280006938.01.T01:intron 25.0%
! TTATAATTCAAACACAGCAT+GGG - Chr2:8263224-8263243 MsG0280006938.01.T01:CDS 25.0%
! TTATATTCTCAGATTCATTC+AGG - Chr2:8259550-8259569 MsG0280006938.01.T01:intron 25.0%
! TTCTAAATGTTCAGATGATT+TGG - Chr2:8260563-8260582 MsG0280006938.01.T01:intron 25.0%
! TTTCGTACACATGTAATATT+AGG - Chr2:8259823-8259842 MsG0280006938.01.T01:intron 25.0%
!! AATGTTTCTGCTTATTATAC+AGG - Chr2:8260768-8260787 MsG0280006938.01.T01:intron 25.0%
!! AGTACTTTTGCTTGAATAAA+AGG - Chr2:8261902-8261921 MsG0280006938.01.T01:intron 25.0%
!! ATAAACTTATCTTTTGCTTG+AGG - Chr2:8263491-8263510 MsG0280006938.01.T01:five_prime_UTR 25.0%
!! GTACTTTTGCTTGAATAAAA+GGG - Chr2:8261903-8261922 MsG0280006938.01.T01:intron 25.0%
!! GTATACATTTTATGTTTGCT+AGG - Chr2:8260346-8260365 MsG0280006938.01.T01:intron 25.0%
!! TAGGATTAAAGTATTACAGA+TGG - Chr2:8260909-8260928 MsG0280006938.01.T01:intron 25.0%
!!! AACAACTTTTATTTGACAAC+GGG + Chr2:8262797-8262816 None:intergenic 25.0%
!!! ATCTAGTTTTGATTTTGTGA+TGG - Chr2:8259604-8259623 MsG0280006938.01.T01:intron 25.0%
!!! CAACAACTTTTATTTGACAA+CGG + Chr2:8262798-8262817 None:intergenic 25.0%
!!! TTTATTTTCACTGGTCATAT+GGG - Chr2:8260233-8260252 MsG0280006938.01.T01:intron 25.0%
!!! TTTCGCATATTAGTTTGTAA+TGG + Chr2:8261166-8261185 None:intergenic 25.0%
!!! TTTGTTTGTTTGTTGTTTTG+TGG + Chr2:8259374-8259393 None:intergenic 25.0%
!!! TTTTGTTTCAGGTCAATTTA+TGG - Chr2:8264154-8264173 MsG0280006938.01.T02:five_prime_UTR 25.0%
AAATTTCTTCATTGCGACAA+AGG - Chr2:8259313-8259332 MsG0280006938.01.T01:CDS 30.0%
AACAATCTACATGCAATTCT+TGG + Chr2:8260740-8260759 None:intergenic 30.0%
AACATATTTGATCTAGTGAG+GGG - Chr2:8263789-8263808 MsG0280006938.01.T01:intron 30.0%
AATAACAGTAAAATCTAGCG+TGG - Chr2:8261596-8261615 MsG0280006938.01.T01:intron 30.0%
ACTGAAACAATACCATGTAT+AGG - Chr2:8262861-8262880 MsG0280006938.01.T01:intron 30.0%
AGATCTTCCTCATCAAAAAA+AGG + Chr2:8259588-8259607 None:intergenic 30.0%
AGGTATGATTTGAACCAATT+TGG - Chr2:8263722-8263741 MsG0280006938.01.T01:intron 30.0%
ATACAAGTGATACAAATTCC+CGG + Chr2:8260330-8260349 None:intergenic 30.0%
ATCAATATGAACATGAATGC+AGG + Chr2:8261270-8261289 None:intergenic 30.0%
ATCTTCCTCATCAAAAAAAG+GGG + Chr2:8259586-8259605 None:intergenic 30.0%
ATGACAAAGGAAATAAAGGT+TGG + Chr2:8263579-8263598 None:intergenic 30.0%
ATTGCATGTAGATTGTTTCA+TGG - Chr2:8260743-8260762 MsG0280006938.01.T01:intron 30.0%
CAAAGATGGATATTTGCAAT+AGG + Chr2:8263901-8263920 None:intergenic 30.0%
CAATGAAGAAATTTCAGCAA+TGG + Chr2:8259307-8259326 None:intergenic 30.0%
CATCTGAACATTTAGAAAGT+TGG + Chr2:8260560-8260579 None:intergenic 30.0%
CTGTAATACTTTAATCCTAG+GGG + Chr2:8260908-8260927 None:intergenic 30.0%
CTTCAATTTGATCCTTATAG+AGG - Chr2:8263254-8263273 MsG0280006938.01.T01:CDS 30.0%
GATCTTCCTCATCAAAAAAA+GGG + Chr2:8259587-8259606 None:intergenic 30.0%
GATGAGAGACAAAAACTAAA+AGG + Chr2:8263852-8263871 None:intergenic 30.0%
GTAAAGCATATGTAAGTGTT+GGG + Chr2:8260993-8261012 None:intergenic 30.0%
GTAACATATTTGATCTAGTG+AGG - Chr2:8263787-8263806 MsG0280006938.01.T01:intron 30.0%
GTTATAATTCAAACACAGCA+TGG - Chr2:8263223-8263242 MsG0280006938.01.T01:CDS 30.0%
GTTTCTTACACAAGTTATGT+AGG - Chr2:8262664-8262683 MsG0280006938.01.T01:intron 30.0%
TAAAAGTTGTTGTCACTACT+AGG - Chr2:8262806-8262825 MsG0280006938.01.T01:intron 30.0%
TAACTATGTGTTACCATGTT+CGG + Chr2:8263648-8263667 None:intergenic 30.0%
TACTTATTAAGACAATCCTC+TGG + Chr2:8263624-8263643 None:intergenic 30.0%
TATATAGCTCACAGAGAATT+TGG + Chr2:8262057-8262076 None:intergenic 30.0%
TATCATATACAAAGCCAAAG+TGG + Chr2:8259409-8259428 None:intergenic 30.0%
TGTAAATCAATCAAGTAGTC+TGG + Chr2:8262945-8262964 None:intergenic 30.0%
TTGAGTGCAAAATGAGAATT+AGG - Chr2:8259651-8259670 MsG0280006938.01.T01:intron 30.0%
TTGCAAATATCCATCTTTGA+CGG - Chr2:8263902-8263921 MsG0280006938.01.T01:intron 30.0%
TTGCATGTAGATTGTTTCAT+GGG - Chr2:8260744-8260763 MsG0280006938.01.T01:intron 30.0%
! AAAAACCATCTTTTCCACTT+TGG - Chr2:8259392-8259411 MsG0280006938.01.T01:CDS 30.0%
! AAAAGCCAAGTATGTGATTT+TGG + Chr2:8263014-8263033 None:intergenic 30.0%
! AGATAATGGTACATATAAGG+AGG + Chr2:8260662-8260681 None:intergenic 30.0%
! CTCTTTTATATGAAGGGTTT+TGG - Chr2:8263167-8263186 MsG0280006938.01.T01:intron 30.0%
! CTTTTTACATGCAATCTGAA+AGG + Chr2:8262265-8262284 None:intergenic 30.0%
! GATTTGGTATACTATGACAA+AGG + Chr2:8263592-8263611 None:intergenic 30.0%
! GTTTGTCAAGGATGTATTTT+TGG - Chr2:8261722-8261741 MsG0280006938.01.T01:intron 30.0%
! TTATTTTCACTGGTCATATG+GGG - Chr2:8260234-8260253 MsG0280006938.01.T01:intron 30.0%
! TTGAATGTAATCACGTGTTT+TGG - Chr2:8259800-8259819 MsG0280006938.01.T01:intron 30.0%
! TTTATGTTTGCTAGGTACTT+TGG - Chr2:8260354-8260373 MsG0280006938.01.T01:intron 30.0%
!! AAAAAAAGCATCCAGATCAT+AGG + Chr2:8264138-8264157 None:intergenic 30.0%
!! AAGTTTTGTCCTAAACTTCA+AGG + Chr2:8262177-8262196 None:intergenic 30.0%
!! ACAACTTTTATTTGACAACG+GGG + Chr2:8262796-8262815 None:intergenic 30.0%
!! TGATGGATAATTTTGTCTTG+TGG - Chr2:8259621-8259640 MsG0280006938.01.T01:intron 30.0%
!!! AAAATCCCCTTTTTTTGATG+AGG - Chr2:8259578-8259597 MsG0280006938.01.T01:intron 30.0%
!!! CTGAGCCTATTTTAATTATG+TGG - Chr2:8261666-8261685 MsG0280006938.01.T01:intron 30.0%
!!! CTGAGTTTTCTAGCTATATA+AGG - Chr2:8262454-8262473 MsG0280006938.01.T01:intron 30.0%
!!! CTTTATTTTCACTGGTCATA+TGG - Chr2:8260232-8260251 MsG0280006938.01.T01:intron 30.0%
!!! CTTTCGTACTTTATTTTCAC+TGG - Chr2:8260224-8260243 MsG0280006938.01.T01:intron 30.0%
!!! GTCTTTGTTTTAGTTACCAA+GGG - Chr2:8261928-8261947 MsG0280006938.01.T01:intron 30.0%
!!! TCTTTGTTTTAGTTACCAAG+GGG - Chr2:8261929-8261948 MsG0280006938.01.T01:intron 30.0%
!!! TGTCTTTGTTTTAGTTACCA+AGG - Chr2:8261927-8261946 MsG0280006938.01.T01:intron 30.0%
AAAAACAACTTCCGAGGAAA+TGG + Chr2:8263523-8263542 None:intergenic 35.0%
AAAGAAGGTCCTTGAAGTTT+AGG - Chr2:8262165-8262184 MsG0280006938.01.T01:intron 35.0%
AACATTCAGGAAGTCCTTAA+AGG + Chr2:8262758-8262777 None:intergenic 35.0%
AACTATGTGTTACCATGTTC+GGG + Chr2:8263647-8263666 None:intergenic 35.0%
AAGGTCCTCATATTTAGAAG+TGG - Chr2:8263383-8263402 MsG0280006938.01.T01:CDS 35.0%
AAGTATTACAGATGGTAGCA+GGG - Chr2:8260917-8260936 MsG0280006938.01.T01:intron 35.0%
AATGTTGTGTCCTATGTCTT+TGG + Chr2:8259738-8259757 None:intergenic 35.0%
AGATACATGGTTCCTCTATA+AGG + Chr2:8263269-8263288 None:intergenic 35.0%
AGGAACCAAAACCAACAAAA+CGG + Chr2:8264022-8264041 None:intergenic 35.0%
AGGAAGTCCTTAAAGGTTTA+AGG + Chr2:8262751-8262770 None:intergenic 35.0%
ATGCAATTCTTGGTTAGGAT+CGG + Chr2:8260730-8260749 None:intergenic 35.0%
CAAAGCCACTTCTAAATATG+AGG + Chr2:8263391-8263410 None:intergenic 35.0%
CGAAGGTTGAAAATTTGACT+CGG - Chr2:8263952-8263971 MsG0280006938.01.T01:intron 35.0%
CTTACATATGCTTTACCACT+AGG - Chr2:8260997-8261016 MsG0280006938.01.T01:intron 35.0%
GAACCAATTTGGTTATTACG+CGG - Chr2:8263733-8263752 MsG0280006938.01.T01:intron 35.0%
GATGATTCATTGTTGACCAT+AGG - Chr2:8263438-8263457 MsG0280006938.01.T01:exon 35.0%
GCATTCCAAAATCACATACT+TGG - Chr2:8263006-8263025 MsG0280006938.01.T01:intron 35.0%
GGTAAAGCATATGTAAGTGT+TGG + Chr2:8260994-8261013 None:intergenic 35.0%
GTCATGCATAAATCACATTG+AGG + Chr2:8261816-8261835 None:intergenic 35.0%
GTCTTCTGATTTAGACTAGA+CGG - Chr2:8263553-8263572 MsG0280006938.01.T01:intron 35.0%
GTTAAGACACTATCTTATGG+AGG + Chr2:8262506-8262525 None:intergenic 35.0%
GTTCTTGCCTTAAACCTTTA+AGG - Chr2:8262741-8262760 MsG0280006938.01.T01:intron 35.0%
TAATCAAATCGAGGGTCAAA+TGG + Chr2:8260119-8260138 None:intergenic 35.0%
TACAAGTGATACAAATTCCC+GGG + Chr2:8260329-8260348 None:intergenic 35.0%
TACTAGGCGTTTACATAAAG+AGG - Chr2:8262822-8262841 MsG0280006938.01.T01:intron 35.0%
TCAGAAATCCTAATGCTAGA+AGG + Chr2:8260283-8260302 None:intergenic 35.0%
TCGGTTGTGTTTCAGATTAT+GGG - Chr2:8263971-8263990 MsG0280006938.01.T01:five_prime_UTR 35.0%
TCGTAGCTGTAATTCTAACA+CGG - Chr2:8259937-8259956 MsG0280006938.01.T01:intron 35.0%
TCTACATGCAATTCTTGGTT+AGG + Chr2:8260735-8260754 None:intergenic 35.0%
TCTTAATAAGTACCCGAACA+TGG - Chr2:8263632-8263651 MsG0280006938.01.T01:intron 35.0%
TGAATATGTCCCTCTTATCT+TGG + Chr2:8262707-8262726 None:intergenic 35.0%
TGGAGAGATATTGAACATTC+AGG + Chr2:8262771-8262790 None:intergenic 35.0%
TTGCGACAAAGGTAAGAAAT+TGG - Chr2:8259324-8259343 MsG0280006938.01.T01:CDS 35.0%
TTGGGTTCTCATAACTCAAA+TGG + Chr2:8262552-8262571 None:intergenic 35.0%
TTGGTGTGTAATCAAATCGA+GGG + Chr2:8260127-8260146 None:intergenic 35.0%
! AAAGTATTACAGATGGTAGC+AGG - Chr2:8260916-8260935 MsG0280006938.01.T01:intron 35.0%
! ACGTGGTCTCTTTTATATGA+AGG - Chr2:8263160-8263179 MsG0280006938.01.T01:intron 35.0%
! CGTGGTCTCTTTTATATGAA+GGG - Chr2:8263161-8263180 MsG0280006938.01.T01:intron 35.0%
! TATTTTCACTGGTCATATGG+GGG - Chr2:8260235-8260254 MsG0280006938.01.T01:intron 35.0%
! TGTTTTCATTTGCTTGAACG+TGG - Chr2:8263143-8263162 MsG0280006938.01.T01:intron 35.0%
!! CGCATATTAGTTTGTAATGG+TGG + Chr2:8261163-8261182 None:intergenic 35.0%
!!! CATTTTGGGTTGAAAATCGT+AGG - Chr2:8259992-8260011 MsG0280006938.01.T01:intron 35.0%
!!! CTGGATGCTTTTTTTGTTTC+AGG - Chr2:8264143-8264162 MsG0280006938.01.T02:five_prime_UTR 35.0%
!!! CTGTCACGATGATTTTTTGT+TGG - Chr2:8261294-8261313 MsG0280006938.01.T01:intron 35.0%
!!! CTTTGTTTTAGTTACCAAGG+GGG - Chr2:8261930-8261949 MsG0280006938.01.T01:intron 35.0%
!!! GTCTTGCTACTTTTTGTTAG+TGG - Chr2:8261239-8261258 MsG0280006938.01.T01:intron 35.0%
!!! TTTGTTTTAGTTACCAAGGG+GGG - Chr2:8261931-8261950 MsG0280006938.01.T01:intron 35.0%
AAACTCGACTTTGCAAAACG+AGG + Chr2:8261778-8261797 None:intergenic 40.0%
AAAGTTGGAGTCCAATATGC+TGG + Chr2:8260545-8260564 None:intergenic 40.0%
AACCAAAACCAACAAAACGG+AGG + Chr2:8264019-8264038 None:intergenic 40.0%
AACGGAAAAAGGAATGGATG+AGG + Chr2:8259530-8259549 None:intergenic 40.0%
AACGTAATCATCCTCATCTG+TGG + Chr2:8260081-8260100 None:intergenic 40.0%
AACTGTACTTCCTGTCACAT+TGG - Chr2:8261700-8261719 MsG0280006938.01.T01:intron 40.0%
AAGACGAAAAACAACTTCCG+AGG + Chr2:8263529-8263548 None:intergenic 40.0%
ACAGATGAGGATGATTACGT+TGG - Chr2:8260080-8260099 MsG0280006938.01.T01:intron 40.0%
ACGAAGGTTTGTGTTATCGA+AGG - Chr2:8263935-8263954 MsG0280006938.01.T01:intron 40.0%
ACTCATCTGCTCTAGTAATC+AGG + Chr2:8261428-8261447 None:intergenic 40.0%
AGACCGCGTAATAACCAAAT+TGG + Chr2:8263739-8263758 None:intergenic 40.0%
AGAGAATTTGGTATGTCACG+TGG + Chr2:8262045-8262064 None:intergenic 40.0%
AGAGATAACTCTCACATGAG+AGG - Chr2:8262972-8262991 MsG0280006938.01.T01:intron 40.0%
AGCCTATGAACCAAAGACAT+AGG - Chr2:8259725-8259744 MsG0280006938.01.T01:CDS 40.0%
AGTATTACAGATGGTAGCAG+GGG - Chr2:8260918-8260937 MsG0280006938.01.T01:intron 40.0%
AGTTATTGTTGAAGTGGGTC+AGG - Chr2:8261083-8261102 MsG0280006938.01.T01:intron 40.0%
ATATTTGATCTAGTGAGGGG+CGG - Chr2:8263792-8263811 MsG0280006938.01.T01:intron 40.0%
ATCTAGAGGGTAGCTTGATT+AGG - Chr2:8263323-8263342 MsG0280006938.01.T01:CDS 40.0%
CAAAGCCAAAGTGGAAAAGA+TGG + Chr2:8259400-8259419 None:intergenic 40.0%
CCAAATCTTACTATGTCCAG+AGG - Chr2:8263605-8263624 MsG0280006938.01.T01:intron 40.0%
CCACTTAAAAATATGCCCCT+AGG - Chr2:8260890-8260909 MsG0280006938.01.T01:intron 40.0%
CCTCTGGACATAGTAAGATT+TGG + Chr2:8263608-8263627 None:intergenic 40.0%
CGGATCGGAATTTGTAGATT+GGG - Chr2:8263812-8263831 MsG0280006938.01.T01:intron 40.0%
CGTAGCTGTAATTCTAACAC+GGG - Chr2:8259938-8259957 MsG0280006938.01.T01:intron 40.0%
CTCATCTGCTCTAGTAATCA+GGG + Chr2:8261427-8261446 None:intergenic 40.0%
CTCGGTTGTGTTTCAGATTA+TGG - Chr2:8263970-8263989 MsG0280006938.01.T01:five_prime_UTR 40.0%
GAGAAAATGGGCATGGAATA+AGG - Chr2:8261105-8261124 MsG0280006938.01.T01:intron 40.0%
GAGAGCTATCATCCTATACA+TGG + Chr2:8262876-8262895 None:intergenic 40.0%
GATCTCCATCGCTAGTATTA+AGG - Chr2:8261134-8261153 MsG0280006938.01.T01:intron 40.0%
GGTTGCATCAATCATCTAGA+GGG - Chr2:8263310-8263329 MsG0280006938.01.T01:CDS 40.0%
GTTAGAAGAAGAACCAGTGT+AGG + Chr2:8263098-8263117 None:intergenic 40.0%
TAAACTTCAGCCGTCAAAGA+TGG + Chr2:8263915-8263934 None:intergenic 40.0%
TACCACTAGGCTATGTTCTT+GGG - Chr2:8261010-8261029 MsG0280006938.01.T01:intron 40.0%
TCCAAGTCGTGATCAGATTT+CGG - Chr2:8261455-8261474 MsG0280006938.01.T01:intron 40.0%
TGCACATGATAGATAGGTCT+AGG - Chr2:8260822-8260841 MsG0280006938.01.T01:intron 40.0%
TGGTTGCATCAATCATCTAG+AGG - Chr2:8263309-8263328 MsG0280006938.01.T01:CDS 40.0%
TTACCACTAGGCTATGTTCT+TGG - Chr2:8261009-8261028 MsG0280006938.01.T01:intron 40.0%
TTGTCTCTCATCAACTCGTT+CGG - Chr2:8263860-8263879 MsG0280006938.01.T01:intron 40.0%
! AAACAACAGGAAGAGTGCAA+GGG + Chr2:8260183-8260202 None:intergenic 40.0%
! AAATCTGATCACGACTTGGA+GGG + Chr2:8261455-8261474 None:intergenic 40.0%
! AAGAGCTTTAGCCTATGATC+TGG - Chr2:8264124-8264143 MsG0280006938.01.T02:five_prime_UTR 40.0%
! ATTTTCACTGGTCATATGGG+GGG - Chr2:8260236-8260255 MsG0280006938.01.T01:intron 40.0%
! CTTGGTGTGTAATCAAATCG+AGG + Chr2:8260128-8260147 None:intergenic 40.0%
! GGATGATAGCTCTCTAAAAG+AGG - Chr2:8262882-8262901 MsG0280006938.01.T01:intron 40.0%
! GGTTTAAGGCAAGAACTTGA+TGG + Chr2:8262737-8262756 None:intergenic 40.0%
! GTCCTATGTCTTTGGTTCAT+AGG + Chr2:8259730-8259749 None:intergenic 40.0%
! TGAGGTATTCTCCATTTCCT+CGG - Chr2:8263509-8263528 MsG0280006938.01.T01:five_prime_UTR 40.0%
!! ATGTAAGTGTTGGGTGAAAC+CGG + Chr2:8260984-8261003 None:intergenic 40.0%
!! CCTAGGGGCATATTTTTAAG+TGG + Chr2:8260893-8260912 None:intergenic 40.0%
!! TTCCTGTTGTTTCTTGGTAC+TGG - Chr2:8260191-8260210 MsG0280006938.01.T01:intron 40.0%
!! TTTTATTTGACAACGGGGTC+TGG + Chr2:8262791-8262810 None:intergenic 40.0%
!!! AACCTCCGTTTTGTTGGTTT+TGG - Chr2:8264014-8264033 MsG0280006938.01.T01:five_prime_UTR 40.0%
!!! AGGGGCATATTTTTAAGTGG+TGG + Chr2:8260890-8260909 None:intergenic 40.0%
!!! GGGGCATATTTTTAAGTGGT+GGG + Chr2:8260889-8260908 None:intergenic 40.0%
!!! TTTTGGTTCCTCCATTCGTT+CGG - Chr2:8264031-8264050 MsG0280006938.01.T01:five_prime_UTR 40.0%
AATGGGCATGGAATAAGGAC+AGG - Chr2:8261110-8261129 MsG0280006938.01.T01:intron 45.0%
ACAGCTACGACTAAGCACAA+GGG + Chr2:8259927-8259946 None:intergenic 45.0%
ACCACTAGGCTATGTTCTTG+GGG - Chr2:8261011-8261030 MsG0280006938.01.T01:intron 45.0%
ACCGAAATCTGATCACGACT+TGG + Chr2:8261459-8261478 None:intergenic 45.0%
AGGAATGGATGAGGAAAACC+TGG + Chr2:8259521-8259540 None:intergenic 45.0%
AGGTGTTCAATACACCACAC+TGG + Chr2:8263078-8263097 None:intergenic 45.0%
CCAGCAATCATCACGTTATG+CGG + Chr2:8264086-8264105 None:intergenic 45.0%
CCTTGACAAACCAATGTGAC+AGG + Chr2:8261713-8261732 None:intergenic 45.0%
CTGTGTTTATTTGAGCCGAG+GGG - Chr2:8259961-8259980 MsG0280006938.01.T01:intron 45.0%
GAAAATCGTAGGAGCAAGCA+AGG - Chr2:8260003-8260022 MsG0280006938.01.T01:intron 45.0%
GAAGTGGGTCAGGAGAAAAT+GGG - Chr2:8261093-8261112 MsG0280006938.01.T01:intron 45.0%
GCAAGGGCAATAGATTTCCA+GGG + Chr2:8260167-8260186 None:intergenic 45.0%
GCGGATCGGAATTTGTAGAT+TGG - Chr2:8263811-8263830 MsG0280006938.01.T01:intron 45.0%
GCTGTGTTTATTTGAGCCGA+GGG - Chr2:8259960-8259979 MsG0280006938.01.T01:intron 45.0%
GCTTATGGCCTTCTAGCATT+AGG - Chr2:8260272-8260291 MsG0280006938.01.T01:intron 45.0%
GGAATGGATGAGGAAAACCT+GGG + Chr2:8259520-8259539 None:intergenic 45.0%
GGCAGAAAAGCGATAACCTT+TGG + Chr2:8261402-8261421 None:intergenic 45.0%
GGTGACCTTAATACTAGCGA+TGG + Chr2:8261142-8261161 None:intergenic 45.0%
GGTGTATTGAACACCTACAC+TGG - Chr2:8263082-8263101 MsG0280006938.01.T01:intron 45.0%
GTCCAGTACCAAGAAACAAC+AGG + Chr2:8260196-8260215 None:intergenic 45.0%
GTGTACACGGGTTTGAACAT+GGG - Chr2:8260955-8260974 MsG0280006938.01.T01:intron 45.0%
GTGTTGAGAATTAGCGCATC+AGG - Chr2:8262112-8262131 MsG0280006938.01.T01:intron 45.0%
TACAGCTACGACTAAGCACA+AGG + Chr2:8259928-8259947 None:intergenic 45.0%
TAGAGGGTAGCTTGATTAGG+TGG - Chr2:8263326-8263345 MsG0280006938.01.T01:CDS 45.0%
TCTGCTCTAGTAATCAGGGA+TGG + Chr2:8261423-8261442 None:intergenic 45.0%
TGAAGTGGGTCAGGAGAAAA+TGG - Chr2:8261092-8261111 MsG0280006938.01.T01:intron 45.0%
TGACGGCTGAAGTTTAACGA+AGG - Chr2:8263919-8263938 MsG0280006938.01.T01:intron 45.0%
TGATTACACACCAAGAGCCT+TGG - Chr2:8260133-8260152 MsG0280006938.01.T01:intron 45.0%
TGCAAGGGCAATAGATTTCC+AGG + Chr2:8260168-8260187 None:intergenic 45.0%
TGTGTTTATTTGAGCCGAGG+GGG - Chr2:8259962-8259981 MsG0280006938.01.T01:intron 45.0%
TTGGTTATTACGCGGTCTCT+GGG - Chr2:8263741-8263760 MsG0280006938.01.T01:intron 45.0%
TTTGGTTATTACGCGGTCTC+TGG - Chr2:8263740-8263759 MsG0280006938.01.T01:intron 45.0%
! AGATGCAACCTCCGTTTTGT+TGG - Chr2:8264008-8264027 MsG0280006938.01.T01:five_prime_UTR 45.0%
! GAAACAACAGGAAGAGTGCA+AGG + Chr2:8260184-8260203 None:intergenic 45.0%
! GAAATCTGATCACGACTTGG+AGG + Chr2:8261456-8261475 None:intergenic 45.0%
!! CCTGTCACATTGGTTTGTCA+AGG - Chr2:8261710-8261729 MsG0280006938.01.T01:intron 45.0%
!! GCACTCTTCCTGTTGTTTCT+TGG - Chr2:8260185-8260204 MsG0280006938.01.T01:intron 45.0%
!! TGTAAGTGTTGGGTGAAACC+GGG + Chr2:8260983-8261002 None:intergenic 45.0%
!! TTTTCTGGCGACTTGGAGTT+CGG + Chr2:8259449-8259468 None:intergenic 45.0%
!!! ACTTTTTCCGGTGTTTCTGG+CGG + Chr2:8259494-8259513 None:intergenic 45.0%
AGGATTTCTGAGCTTCCTCC+AGG - Chr2:8260292-8260311 MsG0280006938.01.T01:intron 50.0%
ATAACCTTTGGCACCTCTCC+AGG + Chr2:8261390-8261409 None:intergenic 50.0%
ATCCTCATCTGTGGCAAGAG+GGG + Chr2:8260072-8260091 None:intergenic 50.0%
ATGGATGAGGAAAACCTGGG+CGG + Chr2:8259517-8259536 None:intergenic 50.0%
CAGGAAAATGGGGTGTACAC+GGG - Chr2:8260943-8260962 MsG0280006938.01.T01:intron 50.0%
CATCCTCATCTGTGGCAAGA+GGG + Chr2:8260073-8260092 None:intergenic 50.0%
CCGCATAACGTGATGATTGC+TGG - Chr2:8264083-8264102 MsG0280006938.01.T02:five_prime_UTR 50.0%
CTTGCGTATTATGCCTGGAG+AGG - Chr2:8261374-8261393 MsG0280006938.01.T01:intron 50.0%
GCAGGAAAATGGGGTGTACA+CGG - Chr2:8260942-8260961 MsG0280006938.01.T01:intron 50.0%
GGAGAACGCTCTCAAGCTTA+TGG - Chr2:8260257-8260276 MsG0280006938.01.T01:intron 50.0%
GGCTGTGTTTATTTGAGCCG+AGG - Chr2:8259959-8259978 MsG0280006938.01.T01:intron 50.0%
GGTGTACACGGGTTTGAACA+TGG - Chr2:8260954-8260973 MsG0280006938.01.T01:intron 50.0%
TAGCAGGGGAGCAGGAAAAT+GGG - Chr2:8260932-8260951 MsG0280006938.01.T01:intron 50.0%
TCATCCTCATCTGTGGCAAG+AGG + Chr2:8260074-8260093 None:intergenic 50.0%
TTATCAGCCGCCAGAAACAC+CGG - Chr2:8259484-8259503 MsG0280006938.01.T01:intron 50.0%
TTTCCAGGGAACTCTGTCCA+AGG + Chr2:8260153-8260172 None:intergenic 50.0%
! CTCGACTTGCGTATTATGCC+TGG - Chr2:8261369-8261388 MsG0280006938.01.T01:intron 50.0%
! GTTACCAAGGGGGGTTGTTT+TGG - Chr2:8261940-8261959 MsG0280006938.01.T01:intron 50.0%
! TGGCGGCTGATAACGAATTC+CGG + Chr2:8259477-8259496 None:intergenic 50.0%
!! AAACCTGGGCGGACTTTTTC+CGG + Chr2:8259506-8259525 None:intergenic 50.0%
!! CGGACTTTTTCCGGTGTTTC+TGG + Chr2:8259497-8259516 None:intergenic 50.0%
!! CTTAGCGCTGACAACACAGA+AGG - Chr2:8263364-8263383 MsG0280006938.01.T01:CDS 50.0%
!! TCCATTCGTTCGGTGCTTGA+CGG - Chr2:8264041-8264060 MsG0280006938.01.T01:five_prime_UTR 50.0%
AACCGATGGGGTTGAGCTGA+AGG - Chr2:8262010-8262029 MsG0280006938.01.T01:CDS 55.0%
AAGTCGCCAGAAAACGCAGC+CGG - Chr2:8259455-8259474 MsG0280006938.01.T01:CDS 55.0%
AGCAGGGGAGCAGGAAAATG+GGG - Chr2:8260933-8260952 MsG0280006938.01.T01:intron 55.0%
CAAAATGATCCGAGCCCCCT+CGG + Chr2:8259979-8259998 None:intergenic 55.0%
CTCCAGGTACGTTGAAGTCC+CGG - Chr2:8260308-8260327 MsG0280006938.01.T01:intron 55.0%
CTCCTTCAGCTCAACCCCAT+CGG + Chr2:8262015-8262034 None:intergenic 55.0%
GCCCCAAGAACATAGCCTAG+TGG + Chr2:8261015-8261034 None:intergenic 55.0%
GGAACTCTGTCCAAGGCTCT+TGG + Chr2:8260146-8260165 None:intergenic 55.0%
GGGTCAGGAGAAAATGGGCA+TGG - Chr2:8261098-8261117 MsG0280006938.01.T01:intron 55.0%
GTAGCAGGGGAGCAGGAAAA+TGG - Chr2:8260931-8260950 MsG0280006938.01.T01:intron 55.0%
TCAGCCAAAACAACCCCCCT+TGG + Chr2:8261947-8261966 None:intergenic 55.0%
TCCAGGTACGTTGAAGTCCC+GGG - Chr2:8260309-8260328 MsG0280006938.01.T01:intron 55.0%
TGATCTAGTGAGGGGCGGAT+CGG - Chr2:8263797-8263816 MsG0280006938.01.T01:intron 55.0%
TTATTTGAGCCGAGGGGGCT+CGG - Chr2:8259967-8259986 MsG0280006938.01.T01:intron 55.0%
! CGAATTCCGGCTGCGTTTTC+TGG + Chr2:8259464-8259483 None:intergenic 55.0%
! GAGGGGGCTCGGATCATTTT+GGG - Chr2:8259978-8259997 MsG0280006938.01.T01:intron 55.0%
!! ACCGTCAAGCACCGAACGAA+TGG + Chr2:8264045-8264064 None:intergenic 55.0%
!! ATTCGTTCGGTGCTTGACGG+TGG - Chr2:8264044-8264063 MsG0280006938.01.T01:five_prime_UTR 55.0%
!! GTCAAGCACCGAACGAATGG+AGG + Chr2:8264042-8264061 None:intergenic 55.0%
!! TATGCCTGGAGAGGTGCCAA+AGG - Chr2:8261383-8261402 MsG0280006938.01.T01:intron 55.0%
ACACCGGAAAAAGTCCGCCC+AGG - Chr2:8259500-8259519 MsG0280006938.01.T01:intron 60.0%
ACAGATGGTAGCAGGGGAGC+AGG - Chr2:8260924-8260943 MsG0280006938.01.T01:intron 60.0%
CACCCCTCTTGCCACAGATG+AGG - Chr2:8260067-8260086 MsG0280006938.01.T01:intron 60.0%
CGGGACTTCAACGTACCTGG+AGG + Chr2:8260310-8260329 None:intergenic 60.0%
CGGGTTTGAACATGGGCTCC+CGG - Chr2:8260962-8260981 MsG0280006938.01.T01:intron 60.0%
GAGCCTTGGACAGAGTTCCC+TGG - Chr2:8260147-8260166 MsG0280006938.01.T01:intron 60.0%
TCCCGGGACTTCAACGTACC+TGG + Chr2:8260313-8260332 None:intergenic 60.0%
! CGAGGGGGCTCGGATCATTT+TGG - Chr2:8259977-8259996 MsG0280006938.01.T01:intron 60.0%
!! GGCTGCGTTTTCTGGCGACT+TGG + Chr2:8259456-8259475 None:intergenic 60.0%
!! CGTTCGGTGCTTGACGGTGG+TGG - Chr2:8264047-8264066 MsG0280006938.01.T02:five_prime_UTR 65.0%
Chromosome Type Strat End Strand Name
Chr2 gene 8259293 8264190 8259293 ID=MsG0280006938.01;Name=MsG0280006938.01
Chr2 mRNA 8259293 8264064 8259293 ID=MsG0280006938.01.T01;Parent=MsG0280006938.01;Name=MsG0280006938.01.T01;_AED=0.53;_eAED=0.53;_QI=229|0.5|0.4|0.6|0.75|0.6|5|0|219
Chr2 exon 8263170 8263565 8263170 ID=MsG0280006938.01.T01:exon:2400;Parent=MsG0280006938.01.T01
Chr2 exon 8263962 8264064 8263962 ID=MsG0280006938.01.T01:exon:2399;Parent=MsG0280006938.01.T01
Chr2 five_prime_UTR 8263962 8264064 8263962 ID=MsG0280006938.01.T01:five_prime_utr;Parent=MsG0280006938.01.T01
Chr2 five_prime_UTR 8263440 8263565 8263440 ID=MsG0280006938.01.T01:five_prime_utr;Parent=MsG0280006938.01.T01
Chr2 CDS 8263170 8263439 8263170 ID=MsG0280006938.01.T01:cds;Parent=MsG0280006938.01.T01
Chr2 CDS 8262007 8262126 8262007 ID=MsG0280006938.01.T01:cds;Parent=MsG0280006938.01.T01
Chr2 CDS 8259697 8259761 8259697 ID=MsG0280006938.01.T01:cds;Parent=MsG0280006938.01.T01
Chr2 CDS 8259293 8259497 8259293 ID=MsG0280006938.01.T01:cds;Parent=MsG0280006938.01.T01
Chr2 mRNA 8259293 8264190 8259293 ID=MsG0280006938.01.T02;Parent=MsG0280006938.01;Name=MsG0280006938.01.T02;_AED=0.37;_eAED=0.37;_QI=751|0.33|0|0.5|1|1|4|0|219
Chr2 exon 8263170 8264190 8263170 ID=MsG0280006938.01.T02:exon:2404;Parent=MsG0280006938.01.T02
Chr2 five_prime_UTR 8263440 8264190 8263440 ID=MsG0280006938.01.T02:five_prime_utr;Parent=MsG0280006938.01.T02
Chr2 CDS 8263170 8263439 8263170 ID=MsG0280006938.01.T02:cds;Parent=MsG0280006938.01.T02
Chr2 CDS 8262007 8262126 8262007 ID=MsG0280006938.01.T02:cds;Parent=MsG0280006938.01.T02
Chr2 CDS 8259697 8259761 8259697 ID=MsG0280006938.01.T02:cds;Parent=MsG0280006938.01.T02
Chr2 CDS 8259293 8259497 8259293 ID=MsG0280006938.01.T02:cds;Parent=MsG0280006938.01.T02
Gene Sequence

>MsG0280006938.01.T01

ATGGCAACTAGACGTGTTCGTTACACCCCTCTTGCCACAGATGAGGATGATTACGTTGGTAATCAAACTAGACCATTTGACCCTCGATTTGATTACACACCAAGAGCCTTGGACAGAGTTCCCTGGAAATCTATTGCCCTTGCACTCTTCCTGTTGTTTCTTGGTACTGGACTTCTGTTTCTTTCGTACTTTATTTTCACTGGTCATATGGGGGGAGAACGCTCTCAAGCTTATGGCCTTCTAGCATTAGGATTTCTGAGCTTCCTCCAGGATTTTATGAGACTCGACTTGCGTATTATGCCTGGAGAGGTGCCAAAGGTTATCGCTTTTCTGCCATCCCTGATTACTAGAGCAGATGAGTTATACCCTCCAAGTCGTGATCAGATTTCGAGGTATGATTTGAACCAATTTGGTTATTACGCGGTCTCTGGGTTGCTAGATTTTCTTCGTGACTTATTATGGGTTCTTATAGATCTGAGATGCAACCTCCGTTTTGTTGGTTTTGGTTCCTCCATTCGTTCGGTGCTTGACGGTGGTGGTGTTATGTTAGCTCCGCATAACGTGATGATTGCTGGTTTGTTGTGTATGCTCAAAAGAGCTTTAGCCTATGATCTGGATGCTTTTTTTGTTTCAGGTCAATTTATGGTCGTTGATGCTTGA

>MsG0280006938.01.T02

ATGGCAACTAGACGTGTTCGTTACACCCCTCTTGCCACAGATGAGGATGATTACGTTGGTAATCAAACTAGACCATTTGACCCTCGATTTGATTACACACCAAGAGCCTTGGACAGAGTTCCCTGGAAATCTATTGCCCTTGCACTCTTCCTGTTGTTTCTTGGTACTGGACTTCTGTTTCTTTCGTACTTTATTTTCACTGGTCATATGGGGGGAGAACGCTCTCAAGCTTATGGCCTTCTAGCATTAGGATTTCTGAGCTTCCTCCAGGATTTTATGAGACTCGACTTGCGTATTATGCCTGGAGAGGTGCCAAAGGTTATCGCTTTTCTGCCATCCCTGATTACTAGAGCAGATGAGTTATACCCTCCAAGTCGTGATCAGATTTCGAGGTATGATTTGAACCAATTTGGTTATTACGCGGTCTCTGGGTTGCTAGATTTTCTTCGTGACTTATTATGGGTTCTTATAGATCTGAGATGCAACCTCCGTTTTGTTGGTTTTGGTTCCTCCATTCGTTCGGTGCTTGACGGTGGTGGTGTTATGTTAGCTCCGCATAACGTGATGATTGCTGGTTTGTTGTGTATGCTCAAAAGAGCTTTAGCCTATGATCTGGATGCTTTTTTTGTTTCAGGTCAATTTATGGTCGTTGATGCTTGA
Protein sequence

>MsG0280006938.01.T01

MATRRVRYTPLATDEDDYVGNQTRPFDPRFDYTPRALDRVPWKSIALALFLLFLGTGLLFLSYFIFTGHMGGERSQAYGLLALGFLSFLQDFMRLDLRIMPGEVPKVIAFLPSLITRADELYPPSRDQISRYDLNQFGYYAVSGLLDFLRDLLWVLIDLRCNLRFVGFGSSIRSVLDGGGVMLAPHNVMIAGLLCMLKRALAYDLDAFFVSGQFMVVDA*

>MsG0280006938.01.T02

MATRRVRYTPLATDEDDYVGNQTRPFDPRFDYTPRALDRVPWKSIALALFLLFLGTGLLFLSYFIFTGHMGGERSQAYGLLALGFLSFLQDFMRLDLRIMPGEVPKVIAFLPSLITRADELYPPSRDQISRYDLNQFGYYAVSGLLDFLRDLLWVLIDLRCNLRFVGFGSSIRSVLDGGGVMLAPHNVMIAGLLCMLKRALAYDLDAFFVSGQFMVVDA*