Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680035269.01.T01 | XP_013442682.1 | 94.553 | 514 | 13 | 1 | 1 | 499 | 1 | 514 | 0 | 1003 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680035269.01.T01 | Q9LV33 | 76.892 | 489 | 97 | 2 | 25 | 497 | 21 | 509 | 0 | 784 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680035269.01.T01 | A0A072TH37 | 94.553 | 514 | 13 | 1 | 1 | 499 | 1 | 514 | 0.0 | 1003 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047989.01 | MsG0680035269.01 | 0.814602 | 1.417393e-51 | 9.552803e-49 |
| MsG0080048773.01 | MsG0680035269.01 | 0.845496 | 3.917176e-59 | 6.539891e-56 |
| MsG0180000639.01 | MsG0680035269.01 | 0.839945 | 1.169130e-57 | 1.640150e-54 |
| MsG0180001091.01 | MsG0680035269.01 | 0.814061 | 1.865933e-51 | 1.239299e-48 |
| MsG0180001610.01 | MsG0680035269.01 | 0.803681 | 3.104227e-49 | 1.569669e-46 |
| MsG0180004672.01 | MsG0680035269.01 | 0.819340 | 1.222435e-52 | 9.380470e-50 |
| MsG0180004988.01 | MsG0680035269.01 | 0.846839 | 1.687331e-59 | 2.942142e-56 |
| MsG0180005039.01 | MsG0680035269.01 | 0.810174 | 1.313978e-50 | 7.865584e-48 |
| MsG0180005051.01 | MsG0680035269.01 | 0.838891 | 2.196993e-57 | 2.983424e-54 |
| MsG0180005806.01 | MsG0680035269.01 | 0.825168 | 5.429818e-54 | 4.911668e-51 |
| MsG0180005918.01 | MsG0680035269.01 | -0.864972 | 8.271934e-65 | 2.646908e-61 |
| MsG0280010899.01 | MsG0680035269.01 | 0.805006 | 1.644114e-49 | 8.602093e-47 |
| MsG0380012524.01 | MsG0680035269.01 | 0.814899 | 1.217631e-51 | 8.272183e-49 |
| MsG0380013177.01 | MsG0680035269.01 | 0.816644 | 4.971371e-52 | 3.542521e-49 |
| MsG0380013373.01 | MsG0680035269.01 | 0.832033 | 1.190958e-55 | 1.315364e-52 |
| MsG0380014297.01 | MsG0680035269.01 | -0.811354 | 7.303023e-51 | 4.510277e-48 |
| MsG0380014530.01 | MsG0680035269.01 | 0.808736 | 2.674959e-50 | 1.541318e-47 |
| MsG0380014909.01 | MsG0680035269.01 | 0.810278 | 1.247942e-50 | 7.490572e-48 |
| MsG0680030767.01 | MsG0680035269.01 | 0.825709 | 4.043212e-54 | 3.713954e-51 |
| MsG0680030903.01 | MsG0680035269.01 | 0.806188 | 9.285301e-50 | 5.008012e-47 |
| MsG0680034725.01 | MsG0680035269.01 | 0.828401 | 9.176278e-55 | 9.111324e-52 |
| MsG0680035075.01 | MsG0680035269.01 | 0.986189 | 5.791160e-166 | 2.573196e-159 |
| MsG0680035269.01 | MsG0780037808.01 | 0.802481 | 5.496506e-49 | 2.695382e-46 |
| MsG0680035269.01 | MsG0780037910.01 | 0.863374 | 2.605179e-64 | 7.880084e-61 |
| MsG0680035269.01 | MsG0780037953.01 | 0.821820 | 3.295468e-53 | 2.710181e-50 |
| MsG0680035269.01 | MsG0780038334.01 | 0.850384 | 1.758267e-60 | 3.438074e-57 |
| MsG0680035269.01 | MsG0780038341.01 | 0.828115 | 1.075342e-54 | 1.058907e-51 |
| MsG0680035269.01 | MsG0780038784.01 | 0.802216 | 6.233783e-49 | 3.036319e-46 |
| MsG0680035269.01 | MsG0780039179.01 | 0.819541 | 1.099959e-52 | 8.489138e-50 |
| MsG0680035269.01 | MsG0780039186.01 | 0.804234 | 2.382318e-49 | 1.221839e-46 |
| MsG0680035269.01 | MsG0780039339.01 | 0.813169 | 2.932096e-51 | 1.900706e-48 |
| MsG0680035269.01 | MsG0780040700.01 | 0.806730 | 7.136254e-50 | 3.902479e-47 |
| MsG0680035269.01 | MsG0780041091.01 | 0.803904 | 2.790361e-49 | 1.419179e-46 |
| MsG0680035269.01 | MsG0780041249.01 | 0.803875 | 2.829268e-49 | 1.437901e-46 |
| MsG0680035269.01 | MsG0780041424.01 | 0.849213 | 3.736014e-60 | 7.032446e-57 |
| MsG0680035269.01 | MsG0880041991.01 | 0.834288 | 3.268986e-56 | 3.862136e-53 |
| MsG0680035269.01 | MsG0880042645.01 | 0.804340 | 2.264614e-49 | 1.164679e-46 |
| MsG0680035269.01 | MsG0880043965.01 | 0.809064 | 2.275947e-50 | 1.323006e-47 |
| MsG0680035269.01 | MsG0880045668.01 | 0.811882 | 5.606493e-51 | 3.511318e-48 |
| MsG0680035269.01 | MsG0880047394.01 | 0.801251 | 9.833193e-49 | 4.673953e-46 |
| MsG0680035269.01 | MsG0880047656.01 | 0.801505 | 8.724585e-49 | 4.173613e-46 |
| MsG0680035269.01 | MsG0880047657.01 | 0.837180 | 6.051000e-57 | 7.797948e-54 |
| MsG0680035269.01 | MsG0880047740.01 | 0.809977 | 1.449141e-50 | 8.630493e-48 |
| MsG0480018910.01 | MsG0680035269.01 | 0.838456 | 2.845528e-57 | 3.813480e-54 |
| MsG0480020122.01 | MsG0680035269.01 | 0.804875 | 1.751386e-49 | 9.133428e-47 |
| MsG0480021248.01 | MsG0680035269.01 | 0.803464 | 3.442563e-49 | 1.731133e-46 |
| MsG0580024404.01 | MsG0680035269.01 | 0.803211 | 3.884316e-49 | 1.940591e-46 |
| MsG0580025055.01 | MsG0680035269.01 | 0.809649 | 1.704507e-50 | 1.006447e-47 |
| MsG0580025561.01 | MsG0680035269.01 | -0.807477 | 4.959485e-50 | 2.765163e-47 |
| MsG0380015486.01 | MsG0680035269.01 | 0.826619 | 2.455660e-54 | 2.314852e-51 |
| MsG0380016036.01 | MsG0680035269.01 | 0.814544 | 1.459864e-51 | 9.823628e-49 |
| MsG0380016152.01 | MsG0680035269.01 | 0.802262 | 6.099182e-49 | 2.974298e-46 |
| MsG0380016188.01 | MsG0680035269.01 | -0.810187 | 1.305558e-50 | 7.817596e-48 |
| MsG0380017423.01 | MsG0680035269.01 | 0.801851 | 7.409513e-49 | 3.575727e-46 |
| MsG0480018323.01 | MsG0680035269.01 | 0.805088 | 1.580548e-49 | 8.287022e-47 |
| MsG0580026159.01 | MsG0680035269.01 | -0.825527 | 4.464364e-54 | 4.079467e-51 |
| MsG0580026271.01 | MsG0680035269.01 | 0.829322 | 5.492677e-55 | 5.603444e-52 |
| MsG0580029529.01 | MsG0680035269.01 | 0.810051 | 1.396877e-50 | 8.335295e-48 |
| MsG0580029918.01 | MsG0680035269.01 | 0.807364 | 5.240232e-50 | 2.913084e-47 |
| MsG0680030599.01 | MsG0680035269.01 | 0.821010 | 5.067815e-53 | 4.074690e-50 |
| MsG0280006587.01 | MsG0680035269.01 | 0.824910 | 6.246808e-54 | 5.609317e-51 |
| MsG0280006938.01 | MsG0680035269.01 | -0.809487 | 1.846903e-50 | 1.085754e-47 |
| MsG0280006996.01 | MsG0680035269.01 | 0.833995 | 3.871208e-56 | 4.533466e-53 |
| MsG0280007976.01 | MsG0680035269.01 | 0.817372 | 3.412029e-52 | 2.480392e-49 |
| MsG0280008709.01 | MsG0680035269.01 | 0.812567 | 3.972955e-51 | 2.534682e-48 |
| MsG0280009169.01 | MsG0680035269.01 | 0.801601 | 8.338518e-49 | 3.998331e-46 |
| MsG0280009869.01 | MsG0680035269.01 | 0.820456 | 6.792439e-53 | 5.377494e-50 |
| MsG0280009953.01 | MsG0680035269.01 | 0.803424 | 3.509828e-49 | 1.763129e-46 |
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0680035269.01 | MsG0380012889.01 | PPI |
| MsG0680035269.01 | MsG0380012550.01 | PPI |
| MsG0680035269.01 | MsG0480018622.01 | PPI |
| MsG0680035269.01 | MsG0180004865.01 | PPI |
| MsG0680035269.01 | MsG0280007216.01 | PPI |
| MsG0680035269.01 | MsG0280007213.01 | PPI |
| MsG0680035269.01 | MsG0680035075.01 | PPI |
| MsG0680035269.01 | MsG0480022231.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680035269.01.T01 | MTR_0110s0040 | 94.553 | 514 | 13 | 1 | 1 | 499 | 1 | 514 | 0.0 | 1003 |
| MsG0680035269.01.T01 | MTR_0110s0030 | 91.829 | 514 | 27 | 1 | 1 | 499 | 1 | 514 | 0.0 | 982 |
| MsG0680035269.01.T01 | MTR_0110s0040 | 97.600 | 375 | 9 | 0 | 1 | 375 | 1 | 375 | 0.0 | 768 |
| MsG0680035269.01.T01 | MTR_0110s0020 | 92.446 | 278 | 21 | 0 | 1 | 278 | 1 | 278 | 0.0 | 542 |
| MsG0680035269.01.T01 | MTR_4g083000 | 50.699 | 501 | 225 | 6 | 20 | 499 | 6 | 505 | 4.17e-178 | 510 |
| MsG0680035269.01.T01 | MTR_4g081530 | 50.947 | 475 | 211 | 5 | 43 | 495 | 24 | 498 | 1.76e-167 | 483 |
| MsG0680035269.01.T01 | MTR_5g044000 | 50.403 | 496 | 203 | 8 | 43 | 495 | 25 | 520 | 2.10e-167 | 483 |
| MsG0680035269.01.T01 | MTR_6g078380 | 50.198 | 506 | 223 | 9 | 20 | 498 | 11 | 514 | 5.85e-167 | 482 |
| MsG0680035269.01.T01 | MTR_6g078450 | 48.713 | 505 | 231 | 8 | 20 | 498 | 11 | 513 | 3.08e-166 | 480 |
| MsG0680035269.01.T01 | MTR_4g066240 | 48.718 | 507 | 234 | 10 | 14 | 497 | 9 | 512 | 8.49e-165 | 476 |
| MsG0680035269.01.T01 | MTR_3g033810 | 50.636 | 472 | 204 | 7 | 43 | 495 | 21 | 482 | 1.62e-164 | 475 |
| MsG0680035269.01.T01 | MTR_3g026400 | 48.611 | 504 | 239 | 5 | 15 | 499 | 9 | 511 | 4.15e-164 | 474 |
| MsG0680035269.01.T01 | MTR_6g078330 | 48.323 | 507 | 232 | 8 | 19 | 499 | 13 | 515 | 5.26e-164 | 474 |
| MsG0680035269.01.T01 | MTR_4g066240 | 48.622 | 508 | 234 | 11 | 14 | 497 | 9 | 513 | 3.47e-163 | 472 |
| MsG0680035269.01.T01 | MTR_2g098520 | 49.378 | 482 | 222 | 6 | 38 | 497 | 29 | 510 | 7.50e-163 | 471 |
| MsG0680035269.01.T01 | MTR_3g033790 | 50.318 | 471 | 206 | 7 | 43 | 495 | 19 | 479 | 1.51e-162 | 469 |
| MsG0680035269.01.T01 | MTR_4g066630 | 49.491 | 491 | 224 | 7 | 29 | 496 | 25 | 514 | 6.88e-162 | 469 |
| MsG0680035269.01.T01 | MTR_4g066590 | 47.647 | 510 | 241 | 9 | 13 | 498 | 3 | 510 | 8.29e-161 | 466 |
| MsG0680035269.01.T01 | MTR_2g098790 | 47.104 | 518 | 248 | 8 | 2 | 497 | 1 | 514 | 1.64e-160 | 465 |
| MsG0680035269.01.T01 | MTR_3g026620 | 48.521 | 507 | 240 | 7 | 13 | 499 | 7 | 512 | 2.73e-160 | 465 |
| MsG0680035269.01.T01 | MTR_2g098540 | 47.714 | 503 | 239 | 7 | 17 | 497 | 7 | 507 | 2.94e-160 | 464 |
| MsG0680035269.01.T01 | MTR_4g066580 | 47.059 | 510 | 244 | 7 | 15 | 498 | 7 | 516 | 1.79e-159 | 463 |
| MsG0680035269.01.T01 | MTR_4g066210 | 49.372 | 478 | 218 | 8 | 43 | 497 | 43 | 519 | 2.77e-156 | 455 |
| MsG0680035269.01.T01 | MTR_3g028720 | 46.351 | 507 | 249 | 7 | 15 | 498 | 9 | 515 | 1.19e-154 | 451 |
| MsG0680035269.01.T01 | MTR_3g026400 | 50.107 | 467 | 211 | 6 | 52 | 499 | 17 | 480 | 1.36e-154 | 449 |
| MsG0680035269.01.T01 | MTR_4g131810 | 46.526 | 475 | 231 | 6 | 48 | 499 | 33 | 507 | 1.02e-153 | 448 |
| MsG0680035269.01.T01 | MTR_4g066640 | 47.162 | 511 | 243 | 10 | 11 | 497 | 6 | 513 | 5.11e-153 | 446 |
| MsG0680035269.01.T01 | MTR_3g026280 | 49.895 | 475 | 217 | 7 | 40 | 495 | 19 | 491 | 1.46e-151 | 442 |
| MsG0680035269.01.T01 | MTR_2g079580 | 45.738 | 481 | 242 | 4 | 34 | 495 | 23 | 503 | 2.29e-151 | 442 |
| MsG0680035269.01.T01 | MTR_2g022760 | 45.882 | 510 | 245 | 8 | 15 | 499 | 10 | 513 | 2.39e-151 | 442 |
| MsG0680035269.01.T01 | MTR_2g079550 | 45.946 | 481 | 241 | 4 | 34 | 495 | 21 | 501 | 6.79e-151 | 441 |
| MsG0680035269.01.T01 | MTR_5g071520 | 46.139 | 518 | 245 | 8 | 14 | 497 | 7 | 524 | 9.93e-151 | 441 |
| MsG0680035269.01.T01 | MTR_4g023000 | 47.780 | 473 | 227 | 6 | 43 | 497 | 24 | 494 | 4.83e-149 | 435 |
| MsG0680035269.01.T01 | MTR_2g022710 | 45.073 | 477 | 242 | 5 | 43 | 499 | 35 | 511 | 7.56e-149 | 436 |
| MsG0680035269.01.T01 | MTR_4g083000 | 52.311 | 411 | 175 | 5 | 110 | 499 | 1 | 411 | 3.69e-148 | 430 |
| MsG0680035269.01.T01 | MTR_2g098540 | 48.690 | 458 | 213 | 6 | 62 | 497 | 6 | 463 | 4.98e-148 | 432 |
| MsG0680035269.01.T01 | MTR_4g066340 | 50.694 | 432 | 192 | 6 | 87 | 497 | 8 | 439 | 1.92e-146 | 427 |
| MsG0680035269.01.T01 | MTR_4g066330 | 43.269 | 520 | 246 | 8 | 2 | 498 | 1 | 494 | 1.07e-145 | 427 |
| MsG0680035269.01.T01 | MTR_4g131800 | 46.512 | 473 | 231 | 5 | 48 | 499 | 521 | 992 | 3.86e-145 | 442 |
| MsG0680035269.01.T01 | MTR_6g078450 | 48.815 | 422 | 195 | 5 | 43 | 443 | 36 | 457 | 3.57e-140 | 411 |
| MsG0680035269.01.T01 | MTR_4g016920 | 44.374 | 471 | 244 | 5 | 42 | 498 | 26 | 492 | 1.50e-139 | 412 |
| MsG0680035269.01.T01 | MTR_4g066630 | 48.165 | 436 | 203 | 6 | 29 | 442 | 25 | 459 | 3.24e-138 | 407 |
| MsG0680035269.01.T01 | MTR_4g066280 | 42.315 | 501 | 240 | 8 | 20 | 497 | 19 | 493 | 1.68e-136 | 403 |
| MsG0680035269.01.T01 | MTR_6g078330 | 49.392 | 411 | 187 | 5 | 110 | 499 | 1 | 411 | 7.71e-136 | 399 |
| MsG0680035269.01.T01 | MTR_5g068740 | 42.942 | 503 | 257 | 8 | 7 | 495 | 2 | 488 | 1.27e-134 | 399 |
| MsG0680035269.01.T01 | MTR_1g088610 | 43.738 | 503 | 252 | 8 | 7 | 495 | 2 | 487 | 1.71e-134 | 403 |
| MsG0680035269.01.T01 | MTR_1g088610 | 37.815 | 119 | 68 | 2 | 383 | 499 | 502 | 616 | 1.42e-17 | 86.3 |
| MsG0680035269.01.T01 | MTR_4g066630 | 49.500 | 400 | 183 | 4 | 29 | 409 | 25 | 424 | 2.03e-133 | 394 |
| MsG0680035269.01.T01 | MTR_7g068910 | 43.856 | 472 | 245 | 6 | 42 | 498 | 30 | 496 | 3.29e-133 | 396 |
| MsG0680035269.01.T01 | MTR_4g066240 | 47.596 | 416 | 195 | 8 | 14 | 409 | 9 | 421 | 2.25e-131 | 388 |
| MsG0680035269.01.T01 | MTR_4g015420 | 42.126 | 508 | 238 | 9 | 23 | 499 | 45 | 527 | 2.47e-131 | 391 |
| MsG0680035269.01.T01 | MTR_3g028720 | 44.789 | 451 | 227 | 6 | 15 | 443 | 9 | 459 | 2.11e-130 | 387 |
| MsG0680035269.01.T01 | MTR_3g026400 | 52.924 | 342 | 160 | 1 | 15 | 355 | 9 | 350 | 3.15e-130 | 383 |
| MsG0680035269.01.T01 | MTR_7g068910 | 42.946 | 482 | 245 | 7 | 42 | 498 | 30 | 506 | 5.76e-130 | 388 |
| MsG0680035269.01.T01 | MTR_4g066580 | 46.651 | 418 | 200 | 5 | 15 | 409 | 7 | 424 | 1.65e-129 | 383 |
| MsG0680035269.01.T01 | MTR_2g022760 | 47.689 | 411 | 193 | 5 | 110 | 499 | 1 | 410 | 1.57e-128 | 380 |
| MsG0680035269.01.T01 | MTR_4g067040 | 47.772 | 404 | 191 | 5 | 13 | 396 | 3 | 406 | 9.78e-128 | 378 |
| MsG0680035269.01.T01 | MTR_4g067040 | 50.411 | 365 | 176 | 4 | 13 | 372 | 3 | 367 | 8.37e-126 | 372 |
| MsG0680035269.01.T01 | MTR_6g078330 | 47.859 | 397 | 188 | 4 | 122 | 499 | 15 | 411 | 3.19e-125 | 372 |
| MsG0680035269.01.T01 | MTR_2g043200 | 43.205 | 493 | 228 | 8 | 31 | 497 | 53 | 519 | 4.29e-125 | 375 |
| MsG0680035269.01.T01 | MTR_3g028720 | 45.783 | 415 | 205 | 5 | 15 | 409 | 9 | 423 | 8.02e-125 | 371 |
| MsG0680035269.01.T01 | MTR_4g066630 | 51.724 | 348 | 164 | 3 | 29 | 372 | 25 | 372 | 8.04e-125 | 369 |
| MsG0680035269.01.T01 | MTR_4g015460 | 41.096 | 511 | 236 | 10 | 25 | 499 | 22 | 503 | 1.59e-123 | 370 |
| MsG0680035269.01.T01 | MTR_6g078330 | 48.518 | 371 | 179 | 5 | 19 | 381 | 13 | 379 | 1.79e-123 | 366 |
| MsG0680035269.01.T01 | MTR_2g022710 | 43.810 | 420 | 216 | 5 | 43 | 442 | 35 | 454 | 4.78e-123 | 368 |
| MsG0680035269.01.T01 | MTR_7g033860 | 41.684 | 475 | 242 | 11 | 45 | 496 | 50 | 512 | 9.85e-123 | 369 |
| MsG0680035269.01.T01 | MTR_2g022710 | 43.810 | 420 | 216 | 5 | 43 | 442 | 35 | 454 | 1.00e-122 | 367 |
| MsG0680035269.01.T01 | MTR_2g022710 | 44.390 | 410 | 208 | 5 | 110 | 499 | 1 | 410 | 2.12e-121 | 362 |
| MsG0680035269.01.T01 | MTR_0108s0030 | 41.703 | 458 | 248 | 9 | 45 | 496 | 5 | 449 | 2.66e-121 | 363 |
| MsG0680035269.01.T01 | MTR_2g079580 | 45.833 | 384 | 191 | 3 | 43 | 409 | 32 | 415 | 8.77e-121 | 360 |
| MsG0680035269.01.T01 | MTR_4g066640 | 50.000 | 368 | 175 | 7 | 11 | 372 | 6 | 370 | 3.57e-120 | 358 |
| MsG0680035269.01.T01 | MTR_2g022710 | 45.195 | 385 | 193 | 4 | 43 | 409 | 35 | 419 | 6.16e-120 | 358 |
| MsG0680035269.01.T01 | MTR_3g028720 | 47.154 | 369 | 187 | 4 | 12 | 372 | 3 | 371 | 1.31e-116 | 349 |
| MsG0680035269.01.T01 | MTR_4g016920 | 43.921 | 403 | 208 | 5 | 110 | 498 | 1 | 399 | 3.57e-114 | 344 |
| MsG0680035269.01.T01 | MTR_2g022710 | 44.892 | 372 | 187 | 4 | 43 | 396 | 35 | 406 | 3.30e-113 | 341 |
| MsG0680035269.01.T01 | MTR_1g088630 | 41.741 | 448 | 217 | 8 | 62 | 495 | 14 | 431 | 5.68e-113 | 342 |
| MsG0680035269.01.T01 | MTR_2g022710 | 49.211 | 317 | 160 | 1 | 43 | 358 | 35 | 351 | 1.20e-112 | 340 |
| MsG0680035269.01.T01 | MTR_7g051510 | 40.803 | 473 | 246 | 10 | 44 | 497 | 76 | 533 | 4.86e-111 | 340 |
| MsG0680035269.01.T01 | MTR_7g068900 | 43.552 | 411 | 209 | 7 | 105 | 498 | 17 | 421 | 5.24e-109 | 333 |
| MsG0680035269.01.T01 | MTR_7g051610 | 40.126 | 476 | 243 | 11 | 44 | 496 | 76 | 532 | 3.21e-106 | 327 |
| MsG0680035269.01.T01 | MTR_7g051650 | 39.241 | 474 | 251 | 10 | 44 | 496 | 76 | 533 | 5.25e-106 | 327 |
| MsG0680035269.01.T01 | MTR_7g051650 | 38.608 | 474 | 250 | 10 | 44 | 496 | 76 | 529 | 6.01e-104 | 321 |
| MsG0680035269.01.T01 | MTR_1g088630 | 46.106 | 321 | 145 | 3 | 40 | 358 | 24 | 318 | 1.61e-93 | 289 |
| MsG0680035269.01.T01 | MTR_4g016920 | 53.226 | 248 | 115 | 1 | 110 | 356 | 1 | 248 | 8.85e-92 | 282 |
| MsG0680035269.01.T01 | MTR_7g056747 | 40.852 | 399 | 221 | 9 | 104 | 496 | 9 | 398 | 5.76e-90 | 281 |
| MsG0680035269.01.T01 | MTR_1g088630 | 50.373 | 268 | 129 | 2 | 40 | 305 | 24 | 289 | 2.06e-87 | 271 |
| MsG0680035269.01.T01 | MTR_8g038650 | 47.826 | 92 | 48 | 0 | 265 | 356 | 57 | 148 | 5.19e-22 | 93.2 |
| MsG0680035269.01.T01 | MTR_4g122980 | 25.547 | 411 | 244 | 14 | 102 | 499 | 175 | 536 | 8.67e-20 | 93.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680035269.01.T01 | AT3G18080 | 76.892 | 489 | 97 | 2 | 25 | 497 | 21 | 509 | 0.0 | 784 |
| MsG0680035269.01.T01 | AT3G18070 | 71.487 | 491 | 112 | 4 | 25 | 499 | 16 | 494 | 0.0 | 733 |
| MsG0680035269.01.T01 | AT3G18070 | 71.283 | 491 | 119 | 4 | 25 | 499 | 16 | 500 | 0.0 | 730 |
| MsG0680035269.01.T01 | AT3G18070 | 73.714 | 350 | 85 | 3 | 26 | 374 | 17 | 360 | 0.0 | 545 |
| MsG0680035269.01.T01 | AT3G18070 | 71.818 | 330 | 77 | 2 | 186 | 499 | 94 | 423 | 4.23e-176 | 502 |
| MsG0680035269.01.T01 | AT3G18070 | 63.750 | 80 | 25 | 1 | 25 | 104 | 16 | 91 | 1.64e-25 | 108 |
| MsG0680035269.01.T01 | AT3G18070 | 72.990 | 311 | 68 | 2 | 205 | 499 | 1 | 311 | 4.03e-169 | 479 |
| MsG0680035269.01.T01 | AT1G26560 | 50.105 | 475 | 215 | 6 | 43 | 495 | 32 | 506 | 2.30e-167 | 483 |
| MsG0680035269.01.T01 | AT5G54570 | 51.245 | 482 | 212 | 6 | 37 | 495 | 24 | 505 | 2.15e-165 | 479 |
| MsG0680035269.01.T01 | AT5G44640 | 47.929 | 507 | 238 | 9 | 13 | 499 | 5 | 505 | 8.65e-156 | 453 |
| MsG0680035269.01.T01 | AT2G44450 | 49.792 | 480 | 218 | 7 | 40 | 499 | 28 | 504 | 6.42e-153 | 446 |
| MsG0680035269.01.T01 | AT1G61820 | 48.414 | 473 | 220 | 7 | 48 | 497 | 35 | 506 | 2.53e-152 | 444 |
| MsG0680035269.01.T01 | AT1G02850 | 48.180 | 467 | 219 | 7 | 44 | 495 | 27 | 485 | 3.72e-152 | 443 |
| MsG0680035269.01.T01 | AT5G42260 | 47.610 | 502 | 237 | 8 | 10 | 491 | 2 | 497 | 2.48e-150 | 439 |
| MsG0680035269.01.T01 | AT2G44480 | 46.186 | 485 | 239 | 6 | 33 | 496 | 26 | 509 | 1.50e-149 | 437 |
| MsG0680035269.01.T01 | AT2G25630 | 47.667 | 493 | 238 | 9 | 17 | 499 | 5 | 487 | 1.54e-149 | 436 |
| MsG0680035269.01.T01 | AT2G44480 | 46.186 | 485 | 239 | 6 | 33 | 496 | 57 | 540 | 3.75e-149 | 437 |
| MsG0680035269.01.T01 | AT4G21760 | 46.087 | 460 | 237 | 4 | 48 | 499 | 59 | 515 | 1.32e-148 | 436 |
| MsG0680035269.01.T01 | AT5G36890 | 46.186 | 485 | 225 | 7 | 31 | 495 | 11 | 479 | 1.60e-148 | 434 |
| MsG0680035269.01.T01 | AT5G36890 | 46.186 | 485 | 225 | 7 | 31 | 495 | 11 | 479 | 1.60e-148 | 434 |
| MsG0680035269.01.T01 | AT4G21760 | 45.319 | 470 | 236 | 4 | 48 | 499 | 59 | 525 | 3.67e-148 | 435 |
| MsG0680035269.01.T01 | AT1G02850 | 46.122 | 490 | 218 | 8 | 44 | 495 | 27 | 508 | 8.36e-148 | 433 |
| MsG0680035269.01.T01 | AT1G02850 | 46.029 | 491 | 218 | 9 | 44 | 495 | 27 | 509 | 2.88e-146 | 429 |
| MsG0680035269.01.T01 | AT5G54570 | 50.351 | 427 | 191 | 4 | 37 | 442 | 24 | 450 | 3.05e-144 | 422 |
| MsG0680035269.01.T01 | AT5G24550 | 44.841 | 504 | 252 | 8 | 20 | 497 | 8 | 511 | 2.63e-143 | 422 |
| MsG0680035269.01.T01 | AT3G60130 | 47.158 | 475 | 225 | 8 | 43 | 495 | 30 | 500 | 2.99e-142 | 419 |
| MsG0680035269.01.T01 | AT1G02850 | 46.039 | 467 | 202 | 8 | 44 | 495 | 27 | 458 | 4.72e-142 | 417 |
| MsG0680035269.01.T01 | AT1G61810 | 45.551 | 472 | 235 | 6 | 48 | 497 | 38 | 509 | 1.32e-141 | 417 |
| MsG0680035269.01.T01 | AT4G27830 | 43.200 | 500 | 250 | 9 | 12 | 495 | 3 | 484 | 4.23e-141 | 416 |
| MsG0680035269.01.T01 | AT5G54570 | 51.471 | 408 | 176 | 5 | 110 | 495 | 1 | 408 | 3.22e-137 | 403 |
| MsG0680035269.01.T01 | AT3G60140 | 43.452 | 504 | 255 | 9 | 18 | 497 | 7 | 504 | 5.15e-137 | 407 |
| MsG0680035269.01.T01 | AT1G61810 | 45.633 | 458 | 227 | 6 | 48 | 483 | 38 | 495 | 3.17e-136 | 404 |
| MsG0680035269.01.T01 | AT5G24540 | 45.437 | 504 | 249 | 8 | 20 | 497 | 8 | 511 | 5.10e-136 | 404 |
| MsG0680035269.01.T01 | AT1G60090 | 41.818 | 495 | 255 | 7 | 15 | 495 | 7 | 482 | 4.06e-135 | 400 |
| MsG0680035269.01.T01 | AT2G44470 | 42.717 | 508 | 259 | 9 | 17 | 497 | 5 | 507 | 4.98e-135 | 403 |
| MsG0680035269.01.T01 | AT2G44460 | 45.276 | 508 | 251 | 10 | 15 | 498 | 3 | 507 | 1.09e-134 | 402 |
| MsG0680035269.01.T01 | AT4G27820 | 44.989 | 469 | 235 | 7 | 42 | 495 | 22 | 482 | 2.40e-134 | 398 |
| MsG0680035269.01.T01 | AT1G60090 | 41.283 | 499 | 259 | 7 | 15 | 495 | 7 | 489 | 2.69e-134 | 398 |
| MsG0680035269.01.T01 | AT1G51470 | 44.444 | 486 | 239 | 11 | 34 | 497 | 35 | 511 | 6.82e-132 | 392 |
| MsG0680035269.01.T01 | AT4G22100 | 42.275 | 466 | 247 | 7 | 45 | 495 | 24 | 482 | 2.74e-131 | 390 |
| MsG0680035269.01.T01 | AT1G47600 | 44.513 | 483 | 242 | 12 | 34 | 497 | 35 | 510 | 1.43e-130 | 389 |
| MsG0680035269.01.T01 | AT1G47600 | 44.421 | 484 | 242 | 12 | 34 | 497 | 35 | 511 | 2.38e-130 | 388 |
| MsG0680035269.01.T01 | AT1G45191 | 42.333 | 463 | 253 | 5 | 44 | 498 | 30 | 486 | 1.20e-129 | 386 |
| MsG0680035269.01.T01 | AT1G75940 | 44.444 | 486 | 232 | 12 | 43 | 495 | 37 | 517 | 4.62e-128 | 383 |
| MsG0680035269.01.T01 | AT2G44490 | 42.678 | 478 | 246 | 10 | 45 | 495 | 16 | 492 | 1.70e-127 | 383 |
| MsG0680035269.01.T01 | AT3G62750 | 41.996 | 481 | 243 | 9 | 31 | 495 | 13 | 473 | 6.83e-127 | 379 |
| MsG0680035269.01.T01 | AT3G21370 | 43.461 | 497 | 244 | 13 | 28 | 495 | 23 | 511 | 7.00e-127 | 380 |
| MsG0680035269.01.T01 | AT3G62750 | 41.996 | 481 | 243 | 9 | 31 | 495 | 39 | 499 | 2.10e-126 | 379 |
| MsG0680035269.01.T01 | AT3G09260 | 41.633 | 502 | 263 | 10 | 20 | 497 | 17 | 512 | 5.79e-126 | 377 |
| MsG0680035269.01.T01 | AT2G44480 | 46.437 | 407 | 198 | 4 | 110 | 496 | 1 | 407 | 9.38e-126 | 373 |
| MsG0680035269.01.T01 | AT1G45191 | 41.365 | 469 | 255 | 6 | 44 | 498 | 30 | 492 | 1.37e-125 | 376 |
| MsG0680035269.01.T01 | AT1G45191 | 41.139 | 474 | 254 | 6 | 44 | 498 | 30 | 497 | 3.45e-125 | 375 |
| MsG0680035269.01.T01 | AT1G66280 | 42.270 | 511 | 266 | 11 | 10 | 495 | 4 | 510 | 5.61e-125 | 375 |
| MsG0680035269.01.T01 | AT5G28510 | 41.683 | 511 | 267 | 12 | 16 | 497 | 13 | 521 | 1.16e-124 | 374 |
| MsG0680035269.01.T01 | AT5G26000 | 42.270 | 511 | 260 | 10 | 15 | 495 | 6 | 511 | 2.29e-124 | 374 |
| MsG0680035269.01.T01 | AT3G60120 | 43.685 | 483 | 239 | 11 | 43 | 497 | 14 | 491 | 2.47e-124 | 374 |
| MsG0680035269.01.T01 | AT1G45191 | 40.664 | 482 | 257 | 6 | 44 | 498 | 30 | 509 | 8.28e-124 | 372 |
| MsG0680035269.01.T01 | AT1G02850 | 47.015 | 402 | 173 | 6 | 44 | 409 | 27 | 424 | 1.65e-123 | 368 |
| MsG0680035269.01.T01 | AT3G03640 | 41.879 | 511 | 259 | 13 | 18 | 497 | 11 | 514 | 4.65e-123 | 370 |
| MsG0680035269.01.T01 | AT1G66270 | 42.032 | 502 | 258 | 11 | 21 | 497 | 19 | 512 | 6.04e-123 | 370 |
| MsG0680035269.01.T01 | AT3G18070 | 70.954 | 241 | 54 | 2 | 186 | 410 | 94 | 334 | 1.95e-122 | 362 |
| MsG0680035269.01.T01 | AT3G18070 | 63.750 | 80 | 25 | 1 | 25 | 104 | 16 | 91 | 5.53e-26 | 108 |
| MsG0680035269.01.T01 | AT2G32860 | 42.558 | 477 | 249 | 8 | 48 | 499 | 99 | 575 | 1.28e-121 | 369 |
| MsG0680035269.01.T01 | AT2G32860 | 43.067 | 476 | 247 | 10 | 48 | 499 | 99 | 574 | 3.23e-121 | 368 |
| MsG0680035269.01.T01 | AT1G61810 | 45.477 | 409 | 202 | 5 | 110 | 497 | 1 | 409 | 7.64e-121 | 361 |
| MsG0680035269.01.T01 | AT1G66270 | 41.633 | 502 | 258 | 12 | 21 | 497 | 19 | 510 | 1.65e-119 | 361 |
| MsG0680035269.01.T01 | AT1G52400 | 43.361 | 482 | 239 | 14 | 43 | 495 | 39 | 515 | 1.99e-119 | 361 |
| MsG0680035269.01.T01 | AT1G52400 | 43.361 | 482 | 239 | 14 | 43 | 495 | 39 | 515 | 1.99e-119 | 361 |
| MsG0680035269.01.T01 | AT3G60130 | 46.247 | 413 | 197 | 7 | 104 | 495 | 40 | 448 | 1.21e-118 | 357 |
| MsG0680035269.01.T01 | AT3G60130 | 46.517 | 402 | 201 | 7 | 104 | 495 | 40 | 437 | 1.19e-117 | 353 |
| MsG0680035269.01.T01 | AT3G18070 | 72.523 | 222 | 45 | 2 | 205 | 410 | 1 | 222 | 3.01e-115 | 339 |
| MsG0680035269.01.T01 | AT3G62740 | 38.229 | 497 | 264 | 10 | 17 | 495 | 7 | 478 | 1.30e-114 | 348 |
| MsG0680035269.01.T01 | AT5G24540 | 44.072 | 447 | 226 | 6 | 20 | 442 | 8 | 454 | 1.39e-114 | 346 |
| MsG0680035269.01.T01 | AT4G27830 | 44.030 | 402 | 203 | 7 | 110 | 495 | 1 | 396 | 1.68e-114 | 344 |
| MsG0680035269.01.T01 | AT5G25980 | 40.408 | 490 | 259 | 11 | 32 | 495 | 40 | 522 | 4.66e-114 | 348 |
| MsG0680035269.01.T01 | AT2G44470 | 41.150 | 452 | 234 | 9 | 17 | 442 | 5 | 450 | 1.39e-112 | 341 |
| MsG0680035269.01.T01 | AT1G61820 | 47.945 | 365 | 168 | 5 | 154 | 497 | 4 | 367 | 1.68e-111 | 335 |
| MsG0680035269.01.T01 | AT1G61810 | 44.241 | 382 | 193 | 5 | 48 | 409 | 38 | 419 | 1.28e-109 | 332 |
| MsG0680035269.01.T01 | AT4G27820 | 44.389 | 401 | 204 | 6 | 110 | 495 | 1 | 397 | 1.98e-109 | 332 |
| MsG0680035269.01.T01 | AT4G27820 | 44.389 | 401 | 204 | 6 | 110 | 495 | 1 | 397 | 1.98e-109 | 332 |
| MsG0680035269.01.T01 | AT5G26000 | 41.978 | 455 | 232 | 8 | 15 | 442 | 6 | 455 | 2.18e-109 | 333 |
| MsG0680035269.01.T01 | AT2G44480 | 50.467 | 321 | 154 | 4 | 33 | 350 | 57 | 375 | 5.69e-109 | 329 |
| MsG0680035269.01.T01 | AT1G60270 | 46.111 | 360 | 179 | 5 | 43 | 391 | 24 | 379 | 6.95e-109 | 328 |
| MsG0680035269.01.T01 | AT3G62750 | 41.492 | 429 | 217 | 8 | 31 | 445 | 39 | 447 | 7.91e-109 | 331 |
| MsG0680035269.01.T01 | AT3G60140 | 41.748 | 412 | 214 | 6 | 18 | 409 | 7 | 412 | 1.83e-107 | 328 |
| MsG0680035269.01.T01 | AT2G44450 | 48.596 | 356 | 163 | 5 | 161 | 499 | 1 | 353 | 3.53e-105 | 318 |
| MsG0680035269.01.T01 | AT3G62750 | 42.040 | 402 | 203 | 7 | 110 | 495 | 1 | 388 | 1.64e-103 | 316 |
| MsG0680035269.01.T01 | AT3G62750 | 42.040 | 402 | 203 | 7 | 110 | 495 | 1 | 388 | 1.64e-103 | 316 |
| MsG0680035269.01.T01 | AT1G45191 | 45.015 | 331 | 176 | 2 | 44 | 372 | 30 | 356 | 1.41e-102 | 314 |
| MsG0680035269.01.T01 | AT1G45191 | 45.015 | 331 | 176 | 2 | 44 | 372 | 30 | 356 | 1.42e-102 | 313 |
| MsG0680035269.01.T01 | AT3G62740 | 38.462 | 442 | 231 | 9 | 17 | 442 | 7 | 423 | 3.98e-101 | 310 |
| MsG0680035269.01.T01 | AT1G52400 | 42.623 | 427 | 213 | 12 | 43 | 442 | 39 | 460 | 1.48e-100 | 310 |
| MsG0680035269.01.T01 | AT2G44470 | 43.407 | 364 | 192 | 7 | 17 | 372 | 5 | 362 | 7.85e-100 | 306 |
| MsG0680035269.01.T01 | AT5G25980 | 39.631 | 434 | 232 | 9 | 32 | 442 | 40 | 466 | 1.49e-99 | 308 |
| MsG0680035269.01.T01 | AT5G25980 | 39.631 | 434 | 232 | 9 | 32 | 442 | 40 | 466 | 1.49e-99 | 308 |
| MsG0680035269.01.T01 | AT3G62750 | 44.785 | 326 | 166 | 3 | 31 | 356 | 13 | 324 | 5.67e-97 | 298 |
| MsG0680035269.01.T01 | AT3G62750 | 44.785 | 326 | 166 | 3 | 31 | 356 | 13 | 324 | 5.67e-97 | 298 |
| MsG0680035269.01.T01 | AT3G62750 | 44.785 | 326 | 166 | 3 | 31 | 356 | 39 | 350 | 3.16e-96 | 298 |
| MsG0680035269.01.T01 | AT2G44460 | 45.833 | 360 | 172 | 8 | 161 | 498 | 3 | 361 | 6.32e-92 | 287 |
| MsG0680035269.01.T01 | AT1G61810 | 47.909 | 263 | 135 | 2 | 48 | 308 | 38 | 300 | 6.75e-85 | 265 |
| MsG0680035269.01.T01 | AT5G48375 | 38.293 | 410 | 184 | 8 | 70 | 461 | 53 | 411 | 7.55e-84 | 266 |
| MsG0680035269.01.T01 | AT1G60270 | 45.051 | 293 | 149 | 4 | 110 | 391 | 1 | 292 | 2.01e-83 | 260 |
| MsG0680035269.01.T01 | AT2G44480 | 44.224 | 303 | 151 | 3 | 212 | 496 | 1 | 303 | 1.38e-81 | 256 |
| MsG0680035269.01.T01 | AT1G51490 | 40.181 | 331 | 170 | 11 | 50 | 371 | 27 | 338 | 1.96e-69 | 228 |
| MsG0680035269.01.T01 | AT5G16580 | 39.249 | 293 | 152 | 7 | 178 | 451 | 12 | 297 | 3.70e-53 | 182 |
| MsG0680035269.01.T01 | AT3G06510 | 26.485 | 404 | 239 | 16 | 105 | 499 | 159 | 513 | 7.84e-19 | 90.1 |
Find 100 sgRNAs with CRISPR-Local
Find 231 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCATTCATCCCCTTGTTTA+TGG | 0.184377 | 6:+101284247 | MsG0680035269.01.T01:CDS |
| CCTATGTACTTATCTGAAAA+TGG | 0.261140 | 6:+101285032 | MsG0680035269.01.T01:CDS |
| GTTCTTGTTAGTTCAGTTAA+TGG | 0.269019 | 6:+101281433 | MsG0680035269.01.T01:CDS |
| GTATCCAAATGCACTGTTTC+AGG | 0.271354 | 6:-101281466 | None:intergenic |
| AGGGTCGTGGCCCTAGTATT+TGG | 0.275337 | 6:+101281578 | MsG0680035269.01.T01:CDS |
| TTCTTGTTAGTTCAGTTAAT+GGG | 0.276549 | 6:+101281434 | MsG0680035269.01.T01:CDS |
| AACCAATATGCAGACATCTT+AGG | 0.282698 | 6:-101285405 | None:intergenic |
| CTTCCTCCTTAGTGAACTTT+GGG | 0.285927 | 6:-101284312 | None:intergenic |
| GCTGCTCTTGGCTATGATAA+TGG | 0.303187 | 6:+101283425 | MsG0680035269.01.T01:CDS |
| AATTGTACAGCTGGAAATTC+AGG | 0.314656 | 6:+101283485 | MsG0680035269.01.T01:CDS |
| GATAACTTTGAATGGAGATT+AGG | 0.315709 | 6:+101285327 | MsG0680035269.01.T01:CDS |
| ATAACTTTGAATGGAGATTA+GGG | 0.318193 | 6:+101285328 | MsG0680035269.01.T01:CDS |
| ATGGAACTGGCAAAGTAAAT+TGG | 0.320592 | 6:+101282955 | MsG0680035269.01.T01:CDS |
| GGAAGGTGTTCAAAAGAATA+TGG | 0.324523 | 6:+101283461 | MsG0680035269.01.T01:CDS |
| GATTGATAGCCAGGGACTTT+TGG | 0.337835 | 6:-101284418 | None:intergenic |
| ACCAATATGCAGACATCTTA+GGG | 0.340920 | 6:-101285404 | None:intergenic |
| ACAGGAATTGTCGCAAATAA+TGG | 0.342164 | 6:+101282478 | MsG0680035269.01.T01:intron |
| AAATTGTGAGCTACAGTATA+AGG | 0.347951 | 6:-101283515 | None:intergenic |
| GAAACAGTGCATTTGGATAC+TGG | 0.355962 | 6:+101281469 | MsG0680035269.01.T01:CDS |
| ACTTCCTCCTTAGTGAACTT+TGG | 0.357250 | 6:-101284313 | None:intergenic |
| TTTCCTAAAGGGTTTGTGTT+TGG | 0.360877 | 6:+101281511 | MsG0680035269.01.T01:CDS |
| ACTCCAAACACAAACCCTTT+AGG | 0.380059 | 6:-101281514 | None:intergenic |
| AGAGCTAGAGACTTTCATAT+TGG | 0.394867 | 6:+101283915 | MsG0680035269.01.T01:CDS |
| GGGTCGTGGCCCTAGTATTT+GGG | 0.395338 | 6:+101281579 | MsG0680035269.01.T01:CDS |
| CCCCTAAGATGTCTGCATAT+TGG | 0.396318 | 6:+101285403 | MsG0680035269.01.T01:CDS |
| CATTGCTTGATAACTTTGAA+TGG | 0.399596 | 6:+101285319 | MsG0680035269.01.T01:CDS |
| ACTAGTATTGTCTTTGAAGA+TGG | 0.407904 | 6:+101281351 | MsG0680035269.01.T01:exon |
| ATGAAAACATCCCAAATACT+AGG | 0.410209 | 6:-101281589 | None:intergenic |
| TCAGCCTTTGATCTTGTAAG+AGG | 0.416498 | 6:-101283876 | None:intergenic |
| GATGATGGAGCAAATGTGTT+TGG | 0.416603 | 6:+101285282 | MsG0680035269.01.T01:CDS |
| CCAAGAGTTGTTGCTGCTCT+TGG | 0.417648 | 6:+101283413 | MsG0680035269.01.T01:CDS |
| TTCCAATCCGATTGATAGCC+AGG | 0.422659 | 6:-101284427 | None:intergenic |
| ATTTGTAGGTATGGATGATC+CGG | 0.427079 | 6:+101285173 | MsG0680035269.01.T01:intron |
| AAGATATAGAGAGAAATATC+AGG | 0.431598 | 6:+101283565 | MsG0680035269.01.T01:CDS |
| GAAAAGCAAAAGGGTAGGAT+TGG | 0.432684 | 6:+101283825 | MsG0680035269.01.T01:CDS |
| ATGGAGACAGAGTGAAGAAC+TGG | 0.441462 | 6:+101283375 | MsG0680035269.01.T01:CDS |
| AGAACTATGCAAAATATTGT+TGG | 0.445283 | 6:+101284280 | MsG0680035269.01.T01:CDS |
| TGTGTTAGTGCTTCAATCAT+AGG | 0.447465 | 6:-101285622 | None:intergenic |
| ATCGATTACTTGCTCGAAAA+GGG | 0.448910 | 6:+101283005 | MsG0680035269.01.T01:CDS |
| GAATATGGAAATTGTACAGC+TGG | 0.451912 | 6:+101283476 | MsG0680035269.01.T01:CDS |
| GTCTTTGAAGATGGTGATGT+TGG | 0.452280 | 6:+101281360 | MsG0680035269.01.T01:exon |
| CTAAAGAAAGCTATAGATGA+TGG | 0.459612 | 6:+101285267 | MsG0680035269.01.T01:CDS |
| AACTTTGATGCAGATGGAAC+TGG | 0.459795 | 6:+101282942 | MsG0680035269.01.T01:intron |
| GAACTATGCAAAATATTGTT+GGG | 0.468791 | 6:+101284281 | MsG0680035269.01.T01:CDS |
| AGTGCCTGAAACAGTGCATT+TGG | 0.469335 | 6:+101281462 | MsG0680035269.01.T01:CDS |
| GATCGATTACTTGCTCGAAA+AGG | 0.469757 | 6:+101283004 | MsG0680035269.01.T01:CDS |
| GTTTGTGTCACAGTTATGTC+TGG | 0.471489 | 6:-101285649 | None:intergenic |
| TTAGGGTACACATCAAGGTT+TGG | 0.474691 | 6:+101285345 | MsG0680035269.01.T01:CDS |
| TATTTCAACTCGAGAGCTAA+AGG | 0.475144 | 6:-101283170 | None:intergenic |
| ATTGATACCAACAAAATCAA+TGG | 0.477296 | 6:-101284353 | None:intergenic |
| CCAAGAGCAGCAACAACTCT+TGG | 0.484195 | 6:-101283413 | None:intergenic |
| GGAGATTAGGGTACACATCA+AGG | 0.485807 | 6:+101285340 | MsG0680035269.01.T01:CDS |
| GAGCTAAAGGAAGGTCATAA+TGG | 0.487554 | 6:-101283157 | None:intergenic |
| GACTTGATTAATGCAAGTCT+TGG | 0.490418 | 6:+101285558 | MsG0680035269.01.T01:three_prime_UTR |
| TGCTTATCAAGTAGAGGGTA+TGG | 0.494673 | 6:+101281546 | MsG0680035269.01.T01:CDS |
| AAAAGTCCCTGGCTATCAAT+CGG | 0.514691 | 6:+101284420 | MsG0680035269.01.T01:CDS |
| CTAGAGACTTTCATATTGGA+TGG | 0.515205 | 6:+101283919 | MsG0680035269.01.T01:CDS |
| TGTTGTGTCATGCAAACCCT+TGG | 0.515909 | 6:-101285211 | None:intergenic |
| TTGGCTATACAATGTACCAT+GGG | 0.531425 | 6:+101284962 | MsG0680035269.01.T01:CDS |
| TCCCTGGCTATCAATCGGAT+TGG | 0.537085 | 6:+101284425 | MsG0680035269.01.T01:CDS |
| GTTTCTTAAGATTCTAATTG+TGG | 0.539219 | 6:+101285475 | MsG0680035269.01.T01:three_prime_UTR |
| GCAGGAAGATATAGATCTCA+TGG | 0.540465 | 6:+101282780 | MsG0680035269.01.T01:intron |
| AACTTCTGCTTATCAAGTAG+AGG | 0.544999 | 6:+101281540 | MsG0680035269.01.T01:CDS |
| GAGGGTATGGCTAGCAAAGA+GGG | 0.549403 | 6:+101281559 | MsG0680035269.01.T01:CDS |
| CAAATCATTAATGTACATCA+AGG | 0.552581 | 6:+101284992 | MsG0680035269.01.T01:CDS |
| TTTAGGAAAAGCAAAAGGGT+AGG | 0.554677 | 6:+101283820 | MsG0680035269.01.T01:intron |
| TCTTGTTAGTTCAGTTAATG+GGG | 0.559570 | 6:+101281435 | MsG0680035269.01.T01:CDS |
| TTAGTACTTACACAACGTTA+CGG | 0.561802 | 6:-101283208 | None:intergenic |
| TTGGAAAATGTTACATTACC+CGG | 0.563963 | 6:-101285192 | None:intergenic |
| TGAAAACATCCCAAATACTA+GGG | 0.582780 | 6:-101281588 | None:intergenic |
| TAATGGTAGAGATTTGCATA+AGG | 0.585059 | 6:-101283140 | None:intergenic |
| ACAAGAATAAACTATTACAA+AGG | 0.585424 | 6:+101285231 | MsG0680035269.01.T01:CDS |
| TGGACCATGAGATTGAGAAC+CGG | 0.587343 | 6:-101282825 | None:intergenic |
| ATTGTCGCAAATAATGGCAC+AGG | 0.588601 | 6:+101282484 | MsG0680035269.01.T01:CDS |
| CAAGCAAAACCAAAAGTCCC+TGG | 0.590365 | 6:+101284409 | MsG0680035269.01.T01:CDS |
| GGAGGAAGTGAATCTTGTGA+AGG | 0.592011 | 6:+101284327 | MsG0680035269.01.T01:CDS |
| GAGGAAGTGAATCTTGTGAA+GGG | 0.593860 | 6:+101284328 | MsG0680035269.01.T01:CDS |
| TTTCAGATAAGTACATAGGT+GGG | 0.594742 | 6:-101285028 | None:intergenic |
| CAGACTCCCAAAGTTCACTA+AGG | 0.598238 | 6:+101284306 | MsG0680035269.01.T01:CDS |
| ACTTCTGCTTATCAAGTAGA+GGG | 0.604107 | 6:+101281541 | MsG0680035269.01.T01:CDS |
| CTTGGCTATACAATGTACCA+TGG | 0.606444 | 6:+101284961 | MsG0680035269.01.T01:CDS |
| TGAGCCTCTTACAAGATCAA+AGG | 0.608751 | 6:+101283872 | MsG0680035269.01.T01:CDS |
| AGAGGGTATGGCTAGCAAAG+AGG | 0.611917 | 6:+101281558 | MsG0680035269.01.T01:CDS |
| ATGTGTTTGGATATCATGCT+TGG | 0.611957 | 6:+101285295 | MsG0680035269.01.T01:CDS |
| ATGGCTAGCAAAGAGGGTCG+TGG | 0.616104 | 6:+101281565 | MsG0680035269.01.T01:CDS |
| AATGATTTGTATAAGCCCCA+TGG | 0.619036 | 6:-101284978 | None:intergenic |
| TTTGTAGGTATGGATGATCC+GGG | 0.619449 | 6:+101285174 | MsG0680035269.01.T01:intron |
| TCCAATCCGATTGATAGCCA+GGG | 0.623481 | 6:-101284426 | None:intergenic |
| TCAACTCGAGAGCTAAAGGA+AGG | 0.625800 | 6:-101283166 | None:intergenic |
| TTGGATACTCACCATAAACA+AGG | 0.626001 | 6:-101284258 | None:intergenic |
| AATACCGGTTCTCAATCTCA+TGG | 0.626644 | 6:+101282821 | MsG0680035269.01.T01:CDS |
| CAGTGCATTTGGATACTGGA+GGG | 0.628351 | 6:+101281473 | MsG0680035269.01.T01:CDS |
| ACTGGCAAAGTAAATTGGAA+AGG | 0.635766 | 6:+101282960 | MsG0680035269.01.T01:CDS |
| TGGATACTCACCATAAACAA+GGG | 0.638550 | 6:-101284257 | None:intergenic |
| GCTCTCGAGTTGAAATACAA+CGG | 0.657864 | 6:+101283176 | MsG0680035269.01.T01:CDS |
| GGATACTCACCATAAACAAG+GGG | 0.663952 | 6:-101284256 | None:intergenic |
| ACTCCCAAAGTTCACTAAGG+AGG | 0.671178 | 6:+101284309 | MsG0680035269.01.T01:CDS |
| ACAGTGCATTTGGATACTGG+AGG | 0.685224 | 6:+101281472 | MsG0680035269.01.T01:CDS |
| CCAATATGCAGACATCTTAG+GGG | 0.704502 | 6:-101285403 | None:intergenic |
| TGGCTATACAATGTACCATG+GGG | 0.741096 | 6:+101284963 | MsG0680035269.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATTTAATATTTTTAAAAA+TGG | - | Chr6:101284488-101284507 | None:intergenic | 0.0% |
| !!! | TGATTTTTTCAAATTATTAA+CGG | + | Chr6:101284125-101284144 | MsG0680035269.01.T01:intron | 10.0% |
| !!! | TTAATCTCTTTTAAAAAAAT+TGG | + | Chr6:101282200-101282219 | MsG0680035269.01.T01:intron | 10.0% |
| !! | AAGAATAATTAATTGAGATT+AGG | - | Chr6:101281640-101281659 | None:intergenic | 15.0% |
| !! | ACATTATATAATATGTTGTT+TGG | - | Chr6:101282648-101282667 | None:intergenic | 15.0% |
| !! | ATAGAAATATTTGAATTACT+TGG | - | Chr6:101282859-101282878 | None:intergenic | 15.0% |
| !!! | AAATGTGATTTTGTTTTATA+TGG | + | Chr6:101283266-101283285 | MsG0680035269.01.T01:intron | 15.0% |
| !!! | ATATTTTTAAAAATGGTTGA+AGG | - | Chr6:101284481-101284500 | None:intergenic | 15.0% |
| !!! | GTAAATATTTAATGATTTGT+AGG | + | Chr6:101285159-101285178 | MsG0680035269.01.T01:intron | 15.0% |
| !! | AAATTAACAAATATGAAGCA+CGG | - | Chr6:101284192-101284211 | None:intergenic | 20.0% |
| !! | AAGAAGATTGAAATAGAAAA+AGG | - | Chr6:101281957-101281976 | None:intergenic | 20.0% |
| !! | AATTTCTTAGTGTATCTTTA+TGG | + | Chr6:101284207-101284226 | MsG0680035269.01.T01:intron | 20.0% |
| !! | ACAAGAATAAACTATTACAA+AGG | + | Chr6:101285231-101285250 | MsG0680035269.01.T01:CDS | 20.0% |
| !! | TAAGTACTAAAATACCTTTA+TGG | + | Chr6:101283221-101283240 | MsG0680035269.01.T01:intron | 20.0% |
| !! | TATTGTTTCAAATTCATAAC+AGG | + | Chr6:101282460-101282479 | MsG0680035269.01.T01:intron | 20.0% |
| !! | TTTCTAATTGAAGAAATTGT+TGG | + | Chr6:101283957-101283976 | MsG0680035269.01.T01:intron | 20.0% |
| !!! | AAAATGAAGCATTCAAATAA+AGG | - | Chr6:101285080-101285099 | None:intergenic | 20.0% |
| !!! | AAATTGGTAAGATTTTGATT+TGG | + | Chr6:101282216-101282235 | MsG0680035269.01.T01:intron | 20.0% |
| !!! | AAGGATGAATTTTCAAATTT+GGG | + | Chr6:101285124-101285143 | MsG0680035269.01.T01:intron | 20.0% |
| !!! | AATGATCGATGTTTTAAAAT+TGG | + | Chr6:101283307-101283326 | MsG0680035269.01.T01:intron | 20.0% |
| !!! | AATTAGTTCTGCTTTTAATA+TGG | + | Chr6:101281866-101281885 | MsG0680035269.01.T01:intron | 20.0% |
| !!! | ACATATTTTAGAGCTTAAAT+TGG | - | Chr6:101284547-101284566 | None:intergenic | 20.0% |
| !!! | ATAATGTGTTTTTGGATAAA+AGG | + | Chr6:101285504-101285523 | MsG0680035269.01.T01:three_prime_UTR | 20.0% |
| !!! | ATGTTGGTTTTTGTAAAATT+TGG | + | Chr6:101281813-101281832 | MsG0680035269.01.T01:intron | 20.0% |
| !!! | ATTTATATGTGATACTTTTC+AGG | + | Chr6:101284929-101284948 | MsG0680035269.01.T01:intron | 20.0% |
| !!! | GTAAAAATGTGTGTTTTTAT+TGG | + | Chr6:101281714-101281733 | MsG0680035269.01.T01:intron | 20.0% |
| !!! | TAAAAACACACATTTTTACA+TGG | - | Chr6:101281713-101281732 | None:intergenic | 20.0% |
| !!! | TAAGGATGAATTTTCAAATT+TGG | + | Chr6:101285123-101285142 | MsG0680035269.01.T01:intron | 20.0% |
| !!! | TATTTAATGATTTGTAGGTA+TGG | + | Chr6:101285164-101285183 | MsG0680035269.01.T01:intron | 20.0% |
| !!! | TCTAAATACTAACATAGTTT+TGG | + | Chr6:101283049-101283068 | MsG0680035269.01.T01:intron | 20.0% |
| !!! | TGTATTGATGAAATGATTTA+GGG | + | Chr6:101281751-101281770 | MsG0680035269.01.T01:intron | 20.0% |
| !!! | TTCAATCTTCTTCTTTTTTA+GGG | + | Chr6:101281965-101281984 | MsG0680035269.01.T01:intron | 20.0% |
| !!! | TTGTATTGATGAAATGATTT+AGG | + | Chr6:101281750-101281769 | MsG0680035269.01.T01:intron | 20.0% |
| !!! | TTTCAATCTTCTTCTTTTTT+AGG | + | Chr6:101281964-101281983 | MsG0680035269.01.T01:intron | 20.0% |
| !!! | TTTTTAGTCCTGTAAAATTA+CGG | - | Chr6:101283247-101283266 | None:intergenic | 20.0% |
| ! | AAAACAATGACTAAAATCGA+CGG | - | Chr6:101284604-101284623 | None:intergenic | 25.0% |
| ! | AACAAATTGTATAAACCACT+TGG | - | Chr6:101283765-101283784 | None:intergenic | 25.0% |
| ! | AAGATATAGAGAGAAATATC+AGG | + | Chr6:101283565-101283584 | MsG0680035269.01.T01:CDS | 25.0% |
| ! | AATTCATCCTTACAAAAAGA+AGG | - | Chr6:101285115-101285134 | None:intergenic | 25.0% |
| ! | AGAACTATGCAAAATATTGT+TGG | + | Chr6:101284280-101284299 | MsG0680035269.01.T01:CDS | 25.0% |
| ! | ATAACTTTGAATGGAGATTA+GGG | + | Chr6:101285328-101285347 | MsG0680035269.01.T01:CDS | 25.0% |
| ! | ATTCATCCTTACAAAAAGAA+GGG | - | Chr6:101285114-101285133 | None:intergenic | 25.0% |
| ! | ATTGATACCAACAAAATCAA+TGG | - | Chr6:101284356-101284375 | None:intergenic | 25.0% |
| ! | CAAATCATTAATGTACATCA+AGG | + | Chr6:101284992-101285011 | MsG0680035269.01.T01:CDS | 25.0% |
| ! | CTATGTTAGTATTTAGACTA+TGG | - | Chr6:101283046-101283065 | None:intergenic | 25.0% |
| ! | GAACTATGCAAAATATTGTT+GGG | + | Chr6:101284281-101284300 | MsG0680035269.01.T01:CDS | 25.0% |
| ! | GTTTCTTAAGATTCTAATTG+TGG | + | Chr6:101285475-101285494 | MsG0680035269.01.T01:three_prime_UTR | 25.0% |
| ! | TAAATGTAAGGTTCATACTA+AGG | - | Chr6:101282620-101282639 | None:intergenic | 25.0% |
| ! | TAGTTAGAGACTAAATTGAA+TGG | - | Chr6:101284515-101284534 | None:intergenic | 25.0% |
| ! | TATTGGATGGTAAAAATTGT+TGG | + | Chr6:101283932-101283951 | MsG0680035269.01.T01:intron | 25.0% |
| ! | TGAATTACTTGGAAAAATTC+TGG | - | Chr6:101282848-101282867 | None:intergenic | 25.0% |
| ! | TTCAATCATATTCTGTCTAT+TGG | - | Chr6:101282137-101282156 | None:intergenic | 25.0% |
| ! | TTCTTGTTAGTTCAGTTAAT+GGG | + | Chr6:101281434-101281453 | MsG0680035269.01.T01:CDS | 25.0% |
| ! | TTTCAAATTATTAACGGTGT+CGG | + | Chr6:101284131-101284150 | MsG0680035269.01.T01:intron | 25.0% |
| !! | ACAAAAACCAACATACTTTT+TGG | - | Chr6:101281807-101281826 | None:intergenic | 25.0% |
| !! | ACAATATTTTGCATAGTTCT+TGG | - | Chr6:101284280-101284299 | None:intergenic | 25.0% |
| !! | CTCAAATATTTTCAATTTGC+AGG | + | Chr6:101282762-101282781 | MsG0680035269.01.T01:intron | 25.0% |
| !! | CTCAACAATTTACTTCTTTT+TGG | - | Chr6:101285445-101285464 | None:intergenic | 25.0% |
| !! | GAATTTTGTTGGATTTTGTT+TGG | + | Chr6:101283847-101283866 | MsG0680035269.01.T01:CDS | 25.0% |
| !! | GTCCAAAAAATACTTCTTTT+TGG | + | Chr6:101282367-101282386 | MsG0680035269.01.T01:intron | 25.0% |
| !!! | AAAAGAAGTATTTTTTGGAC+TGG | - | Chr6:101282367-101282386 | None:intergenic | 25.0% |
| !!! | AGCTAAATTTTGATCAATAC+CGG | + | Chr6:101282806-101282825 | MsG0680035269.01.T01:CDS | 25.0% |
| !!! | GACCAAAAAGAAGTATTTTT+TGG | - | Chr6:101282372-101282391 | None:intergenic | 25.0% |
| !!! | GATTTTTGTTTCAAGACATA+TGG | + | Chr6:101283356-101283375 | MsG0680035269.01.T01:CDS | 25.0% |
| !!! | GTTTTGATGTTTTTATCTTG+TGG | + | Chr6:101283782-101283801 | MsG0680035269.01.T01:intron | 25.0% |
| !!! | GTTTTTTAGGAAAAGCAAAA+GGG | + | Chr6:101283816-101283835 | MsG0680035269.01.T01:intron | 25.0% |
| !!! | TCAATCTTCTTCTTTTTTAG+GGG | + | Chr6:101281966-101281985 | MsG0680035269.01.T01:intron | 25.0% |
| !!! | TTTTGATTCTTGTTTAGATC+AGG | + | Chr6:101283599-101283618 | MsG0680035269.01.T01:intron | 25.0% |
| AAATTGTGAGCTACAGTATA+AGG | - | Chr6:101283518-101283537 | None:intergenic | 30.0% | |
| AACATTGAAGATGCTAAGAA+TGG | + | Chr6:101284786-101284805 | MsG0680035269.01.T01:intron | 30.0% | |
| AAGAAAATCAATGTCAGTCA+TGG | - | Chr6:101284762-101284781 | None:intergenic | 30.0% | |
| ACTTGTTTCAAACTTACTCT+TGG | - | Chr6:101284825-101284844 | None:intergenic | 30.0% | |
| ATGAAAACATCCCAAATACT+AGG | - | Chr6:101281592-101281611 | None:intergenic | 30.0% | |
| CAGGTATATGCTTAGATTAT+CGG | + | Chr6:101283618-101283637 | MsG0680035269.01.T01:intron | 30.0% | |
| CATAAGAATTGTATGATGCA+CGG | + | Chr6:101284011-101284030 | MsG0680035269.01.T01:intron | 30.0% | |
| CCTATGTACTTATCTGAAAA+TGG | + | Chr6:101285032-101285051 | MsG0680035269.01.T01:CDS | 30.0% | |
| CTAAAGAAAGCTATAGATGA+TGG | + | Chr6:101285267-101285286 | MsG0680035269.01.T01:CDS | 30.0% | |
| GATAACTTTGAATGGAGATT+AGG | + | Chr6:101285327-101285346 | MsG0680035269.01.T01:CDS | 30.0% | |
| GTTCTTGTTAGTTCAGTTAA+TGG | + | Chr6:101281433-101281452 | MsG0680035269.01.T01:CDS | 30.0% | |
| TAATGGTAGAGATTTGCATA+AGG | - | Chr6:101283143-101283162 | None:intergenic | 30.0% | |
| TCTTGTTAGTTCAGTTAATG+GGG | + | Chr6:101281435-101281454 | MsG0680035269.01.T01:CDS | 30.0% | |
| TGAAAACATCCCAAATACTA+GGG | - | Chr6:101281591-101281610 | None:intergenic | 30.0% | |
| TGTTTGGCAAGTTAAATGTA+AGG | - | Chr6:101282632-101282651 | None:intergenic | 30.0% | |
| TTAGAGACTAAATTGAATGG+TGG | - | Chr6:101284512-101284531 | None:intergenic | 30.0% | |
| TTAGTACTTACACAACGTTA+CGG | - | Chr6:101283211-101283230 | None:intergenic | 30.0% | |
| TTGGAAAATGTTACATTACC+CGG | - | Chr6:101285195-101285214 | None:intergenic | 30.0% | |
| TTTCAGATAAGTACATAGGT+GGG | - | Chr6:101285031-101285050 | None:intergenic | 30.0% | |
| ! | AAGGTTCATACTAAGGATTT+TGG | - | Chr6:101282613-101282632 | None:intergenic | 30.0% |
| ! | ACTAGTATTGTCTTTGAAGA+TGG | + | Chr6:101281351-101281370 | MsG0680035269.01.T01:exon | 30.0% |
| ! | AGTAGAGATGTTTTTCCTAA+AGG | + | Chr6:101281499-101281518 | MsG0680035269.01.T01:CDS | 30.0% |
| ! | ATTTGAAACTTTGATGCAGA+TGG | + | Chr6:101282936-101282955 | MsG0680035269.01.T01:intron | 30.0% |
| ! | CATTGCTTGATAACTTTGAA+TGG | + | Chr6:101285319-101285338 | MsG0680035269.01.T01:CDS | 30.0% |
| ! | CCATTTTCAGATAAGTACAT+AGG | - | Chr6:101285035-101285054 | None:intergenic | 30.0% |
| ! | CTAATGTGTTTAAGCTCTAA+AGG | - | Chr6:101282551-101282570 | None:intergenic | 30.0% |
| ! | GATGTTTTCATCAAAAAACC+TGG | + | Chr6:101281601-101281620 | MsG0680035269.01.T01:CDS | 30.0% |
| ! | GGTAATGTAACATTTTCCAA+GGG | + | Chr6:101285195-101285214 | MsG0680035269.01.T01:CDS | 30.0% |
| ! | GGTAGTGAATAATGTGTTTT+TGG | + | Chr6:101285496-101285515 | MsG0680035269.01.T01:three_prime_UTR | 30.0% |
| ! | GTAGAGATGTTTTTCCTAAA+GGG | + | Chr6:101281500-101281519 | MsG0680035269.01.T01:CDS | 30.0% |
| ! | TCTTAACCCTTCTTTTTGTA+AGG | + | Chr6:101285105-101285124 | MsG0680035269.01.T01:intron | 30.0% |
| ! | TTATGGTGTTTAATTTCCAC+AGG | + | Chr6:101284224-101284243 | MsG0680035269.01.T01:intron | 30.0% |
| ! | TTTTCAGATAAGTACATAGG+TGG | - | Chr6:101285032-101285051 | None:intergenic | 30.0% |
| !!! | AACCAACATACTTTTTGGTT+TGG | - | Chr6:101281802-101281821 | None:intergenic | 30.0% |
| !!! | GGTTTTTTAGGAAAAGCAAA+AGG | + | Chr6:101283815-101283834 | MsG0680035269.01.T01:intron | 30.0% |
| !!! | TCGATGTTTTAAAATTGGAC+AGG | + | Chr6:101283312-101283331 | MsG0680035269.01.T01:intron | 30.0% |
| AACCAATATGCAGACATCTT+AGG | - | Chr6:101285408-101285427 | None:intergenic | 35.0% | |
| AACTTCTGCTTATCAAGTAG+AGG | + | Chr6:101281540-101281559 | MsG0680035269.01.T01:CDS | 35.0% | |
| AAGATGTGTCATAGTGACTT+TGG | + | Chr6:101283657-101283676 | MsG0680035269.01.T01:intron | 35.0% | |
| AATTGTACAGCTGGAAATTC+AGG | + | Chr6:101283485-101283504 | MsG0680035269.01.T01:CDS | 35.0% | |
| ACAGGAATTGTCGCAAATAA+TGG | + | Chr6:101282478-101282497 | MsG0680035269.01.T01:intron | 35.0% | |
| ACATTGTAGAGACCAAAAAG+AGG | - | Chr6:101285530-101285549 | None:intergenic | 35.0% | |
| ACCAATATGCAGACATCTTA+GGG | - | Chr6:101285407-101285426 | None:intergenic | 35.0% | |
| ACTGGCAAAGTAAATTGGAA+AGG | + | Chr6:101282960-101282979 | MsG0680035269.01.T01:CDS | 35.0% | |
| ACTTCTGCTTATCAAGTAGA+GGG | + | Chr6:101281541-101281560 | MsG0680035269.01.T01:CDS | 35.0% | |
| AGAGCTAGAGACTTTCATAT+TGG | + | Chr6:101283915-101283934 | MsG0680035269.01.T01:CDS | 35.0% | |
| ATCGATTACTTGCTCGAAAA+GGG | + | Chr6:101283005-101283024 | MsG0680035269.01.T01:CDS | 35.0% | |
| ATGGAACTGGCAAAGTAAAT+TGG | + | Chr6:101282955-101282974 | MsG0680035269.01.T01:CDS | 35.0% | |
| ATTTGTAGGTATGGATGATC+CGG | + | Chr6:101285173-101285192 | MsG0680035269.01.T01:intron | 35.0% | |
| CGTGCATCATACAATTCTTA+TGG | - | Chr6:101284013-101284032 | None:intergenic | 35.0% | |
| CTAGAGACTTTCATATTGGA+TGG | + | Chr6:101283919-101283938 | MsG0680035269.01.T01:CDS | 35.0% | |
| CTGTAAAATTACGGCCATAA+AGG | - | Chr6:101283238-101283257 | None:intergenic | 35.0% | |
| GAAACTTCAACGAAATCACA+TGG | + | Chr6:101283695-101283714 | MsG0680035269.01.T01:intron | 35.0% | |
| GAATATGGAAATTGTACAGC+TGG | + | Chr6:101283476-101283495 | MsG0680035269.01.T01:CDS | 35.0% | |
| GACTTGATTAATGCAAGTCT+TGG | + | Chr6:101285558-101285577 | MsG0680035269.01.T01:three_prime_UTR | 35.0% | |
| TATTTCAACTCGAGAGCTAA+AGG | - | Chr6:101283173-101283192 | None:intergenic | 35.0% | |
| TGGATACTCACCATAAACAA+GGG | - | Chr6:101284260-101284279 | None:intergenic | 35.0% | |
| TGTGTTAGTGCTTCAATCAT+AGG | - | Chr6:101285625-101285644 | None:intergenic | 35.0% | |
| TTAGGTAAGAAACACAAACC+AGG | - | Chr6:101281622-101281641 | None:intergenic | 35.0% | |
| TTGGATACTCACCATAAACA+AGG | - | Chr6:101284261-101284280 | None:intergenic | 35.0% | |
| TTGGCTATACAATGTACCAT+GGG | + | Chr6:101284962-101284981 | MsG0680035269.01.T01:CDS | 35.0% | |
| TTTAGGAAAAGCAAAAGGGT+AGG | + | Chr6:101283820-101283839 | MsG0680035269.01.T01:intron | 35.0% | |
| TTTCCTAAAGGGTTTGTGTT+TGG | + | Chr6:101281511-101281530 | MsG0680035269.01.T01:CDS | 35.0% | |
| ! | AATGATTTGTATAAGCCCCA+TGG | - | Chr6:101284981-101285000 | None:intergenic | 35.0% |
| ! | ATCAATCGGATTGGAATGTA+GGG | + | Chr6:101284434-101284453 | MsG0680035269.01.T01:intron | 35.0% |
| ! | ATTCTTTTGAACACCTTCCA+GGG | - | Chr6:101283460-101283479 | None:intergenic | 35.0% |
| ! | ATTGGACAGGAAAGATTTTG+CGG | + | Chr6:101283325-101283344 | MsG0680035269.01.T01:intron | 35.0% |
| ! | CACCAAACCAAAAAGTATGT+TGG | + | Chr6:101281797-101281816 | MsG0680035269.01.T01:intron | 35.0% |
| ! | CTTTATGGCCGTAATTTTAC+AGG | + | Chr6:101283236-101283255 | MsG0680035269.01.T01:intron | 35.0% |
| ! | GGGTAATGTAACATTTTCCA+AGG | + | Chr6:101285194-101285213 | MsG0680035269.01.T01:CDS | 35.0% |
| ! | TATCAATCGGATTGGAATGT+AGG | + | Chr6:101284433-101284452 | MsG0680035269.01.T01:intron | 35.0% |
| ! | TATTCTTTTGAACACCTTCC+AGG | - | Chr6:101283461-101283480 | None:intergenic | 35.0% |
| ! | TTATCTTGTGGTGATGATTG+TGG | + | Chr6:101283794-101283813 | MsG0680035269.01.T01:intron | 35.0% |
| ! | TTCATTCATCCCCTTGTTTA+TGG | + | Chr6:101284247-101284266 | MsG0680035269.01.T01:CDS | 35.0% |
| ! | TTGGATAAAAGGCCTCTTTT+TGG | + | Chr6:101285515-101285534 | MsG0680035269.01.T01:three_prime_UTR | 35.0% |
| !! | CTTTTCAGGCATATTCATCT+TGG | + | Chr6:101284943-101284962 | MsG0680035269.01.T01:intron | 35.0% |
| !! | GGAAGGTGTTCAAAAGAATA+TGG | + | Chr6:101283461-101283480 | MsG0680035269.01.T01:CDS | 35.0% |
| !!! | ACTTTTGGTTTTGCTTGATG+AGG | - | Chr6:101284406-101284425 | None:intergenic | 35.0% |
| !!! | GGTGATGATTGTGGTTTTTT+AGG | + | Chr6:101283803-101283822 | MsG0680035269.01.T01:intron | 35.0% |
| AAAAGTCCCTGGCTATCAAT+CGG | + | Chr6:101284420-101284439 | MsG0680035269.01.T01:CDS | 40.0% | |
| AAACTTACTCTTGGTCCAAC+AGG | - | Chr6:101284816-101284835 | None:intergenic | 40.0% | |
| AACTTTGATGCAGATGGAAC+TGG | + | Chr6:101282942-101282961 | MsG0680035269.01.T01:intron | 40.0% | |
| ACTCCAAACACAAACCCTTT+AGG | - | Chr6:101281517-101281536 | None:intergenic | 40.0% | |
| ACTTCCTCCTTAGTGAACTT+TGG | - | Chr6:101284316-101284335 | None:intergenic | 40.0% | |
| ATGCCTGCAACATAGGTTTA+AGG | - | Chr6:101283116-101283135 | None:intergenic | 40.0% | |
| ATTGTCGCAAATAATGGCAC+AGG | + | Chr6:101282484-101282503 | MsG0680035269.01.T01:CDS | 40.0% | |
| CCAATATGCAGACATCTTAG+GGG | - | Chr6:101285406-101285425 | None:intergenic | 40.0% | |
| CTTCCTCCTTAGTGAACTTT+GGG | - | Chr6:101284315-101284334 | None:intergenic | 40.0% | |
| CTTGGCTATACAATGTACCA+TGG | + | Chr6:101284961-101284980 | MsG0680035269.01.T01:CDS | 40.0% | |
| GAAAAGCAAAAGGGTAGGAT+TGG | + | Chr6:101283825-101283844 | MsG0680035269.01.T01:CDS | 40.0% | |
| GAAACAGTGCATTTGGATAC+TGG | + | Chr6:101281469-101281488 | MsG0680035269.01.T01:CDS | 40.0% | |
| GAGCTAAAGGAAGGTCATAA+TGG | - | Chr6:101283160-101283179 | None:intergenic | 40.0% | |
| GAGGAAGTGAATCTTGTGAA+GGG | + | Chr6:101284328-101284347 | MsG0680035269.01.T01:CDS | 40.0% | |
| GATCGATTACTTGCTCGAAA+AGG | + | Chr6:101283004-101283023 | MsG0680035269.01.T01:CDS | 40.0% | |
| GCAGGAAGATATAGATCTCA+TGG | + | Chr6:101282780-101282799 | MsG0680035269.01.T01:intron | 40.0% | |
| GGATACTCACCATAAACAAG+GGG | - | Chr6:101284259-101284278 | None:intergenic | 40.0% | |
| GTATCCAAATGCACTGTTTC+AGG | - | Chr6:101281469-101281488 | None:intergenic | 40.0% | |
| GTTCCTTAAACCTATGTTGC+AGG | + | Chr6:101283110-101283129 | MsG0680035269.01.T01:intron | 40.0% | |
| GTTTGTGTCACAGTTATGTC+TGG | - | Chr6:101285652-101285671 | None:intergenic | 40.0% | |
| TCAGCCTTTGATCTTGTAAG+AGG | - | Chr6:101283879-101283898 | None:intergenic | 40.0% | |
| TGAGCCTCTTACAAGATCAA+AGG | + | Chr6:101283872-101283891 | MsG0680035269.01.T01:CDS | 40.0% | |
| TGCTTATCAAGTAGAGGGTA+TGG | + | Chr6:101281546-101281565 | MsG0680035269.01.T01:CDS | 40.0% | |
| TGGCTATACAATGTACCATG+GGG | + | Chr6:101284963-101284982 | MsG0680035269.01.T01:CDS | 40.0% | |
| TTAGGGTACACATCAAGGTT+TGG | + | Chr6:101285345-101285364 | MsG0680035269.01.T01:CDS | 40.0% | |
| TTTGTAGGTATGGATGATCC+GGG | + | Chr6:101285174-101285193 | MsG0680035269.01.T01:intron | 40.0% | |
| ! | AGTCTCTTTTTCCGACAAAC+AGG | - | Chr6:101282246-101282265 | None:intergenic | 40.0% |
| ! | GATTTTCATCATGCACCAAG+TGG | + | Chr6:101283747-101283766 | MsG0680035269.01.T01:intron | 40.0% |
| ! | GGGTAGGATTGGAATTTTGT+TGG | + | Chr6:101283836-101283855 | MsG0680035269.01.T01:CDS | 40.0% |
| ! | GTCTTTGAAGATGGTGATGT+TGG | + | Chr6:101281360-101281379 | MsG0680035269.01.T01:exon | 40.0% |
| ! | TTCTTTTGAACACCTTCCAG+GGG | - | Chr6:101283459-101283478 | None:intergenic | 40.0% |
| !! | AATACCGGTTCTCAATCTCA+TGG | + | Chr6:101282821-101282840 | MsG0680035269.01.T01:CDS | 40.0% |
| !! | GATGATGGAGCAAATGTGTT+TGG | + | Chr6:101285282-101285301 | MsG0680035269.01.T01:CDS | 40.0% |
| !! | GCTCTCGAGTTGAAATACAA+CGG | + | Chr6:101283176-101283195 | MsG0680035269.01.T01:CDS | 40.0% |
| !!! | AAGGGCTCCATTGATTTTGT+TGG | + | Chr6:101284346-101284365 | MsG0680035269.01.T01:CDS | 40.0% |
| ACAGTGCATTTGGATACTGG+AGG | + | Chr6:101281472-101281491 | MsG0680035269.01.T01:CDS | 45.0% | |
| ACTCCCAAAGTTCACTAAGG+AGG | + | Chr6:101284309-101284328 | MsG0680035269.01.T01:CDS | 45.0% | |
| AGGAGTAATGCCTGCAACAT+AGG | - | Chr6:101283123-101283142 | None:intergenic | 45.0% | |
| AGTGCCTGAAACAGTGCATT+TGG | + | Chr6:101281462-101281481 | MsG0680035269.01.T01:CDS | 45.0% | |
| ATGGAGACAGAGTGAAGAAC+TGG | + | Chr6:101283375-101283394 | MsG0680035269.01.T01:CDS | 45.0% | |
| CAAGCAAAACCAAAAGTCCC+TGG | + | Chr6:101284409-101284428 | MsG0680035269.01.T01:CDS | 45.0% | |
| CAGACTCCCAAAGTTCACTA+AGG | + | Chr6:101284306-101284325 | MsG0680035269.01.T01:CDS | 45.0% | |
| CAGTGCATTTGGATACTGGA+GGG | + | Chr6:101281473-101281492 | MsG0680035269.01.T01:CDS | 45.0% | |
| CCCCTAAGATGTCTGCATAT+TGG | + | Chr6:101285403-101285422 | MsG0680035269.01.T01:CDS | 45.0% | |
| GCGTTGTTCTTCGTGTACAA+CGG | + | Chr6:101283979-101283998 | MsG0680035269.01.T01:intron | 45.0% | |
| GCTGCTCTTGGCTATGATAA+TGG | + | Chr6:101283425-101283444 | MsG0680035269.01.T01:CDS | 45.0% | |
| GGAGATTAGGGTACACATCA+AGG | + | Chr6:101285340-101285359 | MsG0680035269.01.T01:CDS | 45.0% | |
| GGAGGAAGTGAATCTTGTGA+AGG | + | Chr6:101284327-101284346 | MsG0680035269.01.T01:CDS | 45.0% | |
| TCAACTCGAGAGCTAAAGGA+AGG | - | Chr6:101283169-101283188 | None:intergenic | 45.0% | |
| TGGACCATGAGATTGAGAAC+CGG | - | Chr6:101282828-101282847 | None:intergenic | 45.0% | |
| TGTTGTGTCATGCAAACCCT+TGG | - | Chr6:101285214-101285233 | None:intergenic | 45.0% | |
| ! | GATTTGGTCTGCCTGTTTGT+CGG | + | Chr6:101282232-101282251 | MsG0680035269.01.T01:intron | 45.0% |
| ! | TCCAATCCGATTGATAGCCA+GGG | - | Chr6:101284429-101284448 | None:intergenic | 45.0% |
| ! | TTCCAATCCGATTGATAGCC+AGG | - | Chr6:101284430-101284449 | None:intergenic | 45.0% |
| !! | GATTGATAGCCAGGGACTTT+TGG | - | Chr6:101284421-101284440 | None:intergenic | 45.0% |
| !!! | GATAATGGCTTTTTTGCCCC+TGG | + | Chr6:101283440-101283459 | MsG0680035269.01.T01:CDS | 45.0% |
| !! | TATCAAATAATAATTTAAAA+AGG | + | Chr6:101282046-101282065 | MsG0680035269.01.T01:intron | 5.0% |
| !!! | TTTTTTTACAATAATTTTTT+TGG | + | Chr6:101282399-101282418 | MsG0680035269.01.T01:intron | 5.0% |
| ACACGACACGTGTCTAACAC+AGG | - | Chr6:101284060-101284079 | None:intergenic | 50.0% | |
| CAAGGGGATGAATGAACCTG+TGG | - | Chr6:101284243-101284262 | None:intergenic | 50.0% | |
| CCAAGAGCAGCAACAACTCT+TGG | - | Chr6:101283416-101283435 | None:intergenic | 50.0% | |
| CCAAGAGTTGTTGCTGCTCT+TGG | + | Chr6:101283413-101283432 | MsG0680035269.01.T01:CDS | 50.0% | |
| GTCAGTGTTTGTGTCGTGTC+CGG | + | Chr6:101284157-101284176 | MsG0680035269.01.T01:intron | 50.0% | |
| GTGTGTGTGTGTGTGTGTGT+GGG | + | Chr6:101282708-101282727 | MsG0680035269.01.T01:intron | 50.0% | |
| TATGATGCACGGACACTCCT+CGG | + | Chr6:101284022-101284041 | MsG0680035269.01.T01:intron | 50.0% | |
| TCCCTGGCTATCAATCGGAT+TGG | + | Chr6:101284425-101284444 | MsG0680035269.01.T01:CDS | 50.0% | |
| TGAAGCACGGACATGAACAC+CGG | - | Chr6:101284179-101284198 | None:intergenic | 50.0% | |
| TGTGTGTGTGTGTGTGTGTG+GGG | + | Chr6:101282707-101282726 | MsG0680035269.01.T01:intron | 50.0% | |
| TGTGTGTGTGTGTGTGTGTG+TGG | + | Chr6:101282707-101282726 | MsG0680035269.01.T01:intron | 50.0% | |
| ! | AGAGGGTATGGCTAGCAAAG+AGG | + | Chr6:101281558-101281577 | MsG0680035269.01.T01:CDS | 50.0% |
| ! | GAGGGTATGGCTAGCAAAGA+GGG | + | Chr6:101281559-101281578 | MsG0680035269.01.T01:CDS | 50.0% |
| ! | GCTAAGAATGGAGTGCCTGT+TGG | + | Chr6:101284798-101284817 | MsG0680035269.01.T01:intron | 50.0% |
| !!! | ATGGCTTTTTTGCCCCTGGA+AGG | + | Chr6:101283444-101283463 | MsG0680035269.01.T01:CDS | 50.0% |
| AGGGTCGTGGCCCTAGTATT+TGG | + | Chr6:101281578-101281597 | MsG0680035269.01.T01:CDS | 55.0% | |
| ATGGCTAGCAAAGAGGGTCG+TGG | + | Chr6:101281565-101281584 | MsG0680035269.01.T01:CDS | 55.0% | |
| GGGTCGTGGCCCTAGTATTT+GGG | + | Chr6:101281579-101281598 | MsG0680035269.01.T01:CDS | 55.0% | |
| GTGTGTGTGTGTGTGTGTGG+GGG | + | Chr6:101282720-101282739 | MsG0680035269.01.T01:intron | 55.0% | |
| TGTGTGTGTGTGTGTGTGGG+GGG | + | Chr6:101282721-101282740 | MsG0680035269.01.T01:intron | 55.0% | |
| ! | ACAGGAGCACACCTAATCCG+AGG | - | Chr6:101284042-101284061 | None:intergenic | 55.0% |
| GCACGGACACTCCTCGGATT+AGG | + | Chr6:101284028-101284047 | MsG0680035269.01.T01:intron | 60.0% | |
| GTGTGTGTGTGTGTGTGGGG+GGG | + | Chr6:101282722-101282741 | MsG0680035269.01.T01:intron | 60.0% | |
| TGTGTGTGTGTGTGTGGGGG+GGG | + | Chr6:101282723-101282742 | MsG0680035269.01.T01:intron | 60.0% | |
| GTGTGTGTGTGTGTGGGGGG+GGG | + | Chr6:101282724-101282743 | MsG0680035269.01.T01:intron | 65.0% | |
| TGTGTGTGTGTGTGGGGGGG+GGG | + | Chr6:101282725-101282744 | MsG0680035269.01.T01:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr6 | gene | 101281317 | 101285690 | 101281317 | ID=MsG0680035269.01;Name=MsG0680035269.01 |
| Chr6 | mRNA | 101281317 | 101285690 | 101281317 | ID=MsG0680035269.01.T01;Parent=MsG0680035269.01;Name=MsG0680035269.01.T01;_AED=0.33;_eAED=0.33;_QI=53|0.88|0.9|1|1|1|10|235|499 |
| Chr6 | exon | 101281317 | 101281622 | 101281317 | ID=MsG0680035269.01.T01:exon:20708;Parent=MsG0680035269.01.T01 |
| Chr6 | exon | 101282482 | 101282540 | 101282482 | ID=MsG0680035269.01.T01:exon:20709;Parent=MsG0680035269.01.T01 |
| Chr6 | exon | 101282784 | 101282859 | 101282784 | ID=MsG0680035269.01.T01:exon:20710;Parent=MsG0680035269.01.T01 |
| Chr6 | exon | 101282955 | 101283026 | 101282955 | ID=MsG0680035269.01.T01:exon:20711;Parent=MsG0680035269.01.T01 |
| Chr6 | exon | 101283132 | 101283219 | 101283132 | ID=MsG0680035269.01.T01:exon:20712;Parent=MsG0680035269.01.T01 |
| Chr6 | exon | 101283334 | 101283586 | 101283334 | ID=MsG0680035269.01.T01:exon:20713;Parent=MsG0680035269.01.T01 |
| Chr6 | exon | 101283825 | 101283940 | 101283825 | ID=MsG0680035269.01.T01:exon:20714;Parent=MsG0680035269.01.T01 |
| Chr6 | exon | 101284246 | 101284450 | 101284246 | ID=MsG0680035269.01.T01:exon:20715;Parent=MsG0680035269.01.T01 |
| Chr6 | exon | 101284951 | 101285053 | 101284951 | ID=MsG0680035269.01.T01:exon:20716;Parent=MsG0680035269.01.T01 |
| Chr6 | exon | 101285181 | 101285690 | 101285181 | ID=MsG0680035269.01.T01:exon:20717;Parent=MsG0680035269.01.T01 |
| Chr6 | five_prime_UTR | 101281317 | 101281369 | 101281317 | ID=MsG0680035269.01.T01:five_prime_utr;Parent=MsG0680035269.01.T01 |
| Chr6 | CDS | 101281370 | 101281622 | 101281370 | ID=MsG0680035269.01.T01:cds;Parent=MsG0680035269.01.T01 |
| Chr6 | CDS | 101282482 | 101282540 | 101282482 | ID=MsG0680035269.01.T01:cds;Parent=MsG0680035269.01.T01 |
| Chr6 | CDS | 101282784 | 101282859 | 101282784 | ID=MsG0680035269.01.T01:cds;Parent=MsG0680035269.01.T01 |
| Chr6 | CDS | 101282955 | 101283026 | 101282955 | ID=MsG0680035269.01.T01:cds;Parent=MsG0680035269.01.T01 |
| Chr6 | CDS | 101283132 | 101283219 | 101283132 | ID=MsG0680035269.01.T01:cds;Parent=MsG0680035269.01.T01 |
| Chr6 | CDS | 101283334 | 101283586 | 101283334 | ID=MsG0680035269.01.T01:cds;Parent=MsG0680035269.01.T01 |
| Chr6 | CDS | 101283825 | 101283940 | 101283825 | ID=MsG0680035269.01.T01:cds;Parent=MsG0680035269.01.T01 |
| Chr6 | CDS | 101284246 | 101284450 | 101284246 | ID=MsG0680035269.01.T01:cds;Parent=MsG0680035269.01.T01 |
| Chr6 | CDS | 101284951 | 101285053 | 101284951 | ID=MsG0680035269.01.T01:cds;Parent=MsG0680035269.01.T01 |
| Chr6 | CDS | 101285181 | 101285455 | 101285181 | ID=MsG0680035269.01.T01:cds;Parent=MsG0680035269.01.T01 |
| Chr6 | three_prime_UTR | 101285456 | 101285690 | 101285456 | ID=MsG0680035269.01.T01:three_prime_utr;Parent=MsG0680035269.01.T01 |
| Gene Sequence |
| Protein sequence |
