AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380017262.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380017262.01.T02 MTR_3g104260 97.257 474 10 2 1 474 1 471 0.0 947
MsG0380017262.01.T02 MTR_4g019850 89.006 473 41 2 2 474 13 474 0.0 831
MsG0380017262.01.T02 MTR_4g019850 89.006 473 41 2 2 474 24 485 0.0 830
MsG0380017262.01.T02 MTR_3g104260 96.503 286 7 2 1 286 1 283 0.0 562
MsG0380017262.01.T02 MTR_3g097290 62.150 428 154 3 4 428 22 444 0.0 534
MsG0380017262.01.T02 MTR_8g095320 62.560 414 142 3 16 428 43 444 0.0 530
MsG0380017262.01.T02 MTR_3g097290 66.221 299 101 0 66 364 82 380 6.66e-148 427
MsG0380017262.01.T02 MTR_7g056307 55.224 67 28 1 362 428 75 139 6.37e-14 69.3
MsG0380017262.01.T02 MTR_4g087690 64.444 45 14 1 391 433 5 49 3.64e-12 62.8
MsG0380017262.01.T01 MTR_3g104260 97.257 474 10 2 1 474 1 471 0.0 947
MsG0380017262.01.T01 MTR_4g019850 89.006 473 41 2 2 474 13 474 0.0 831
MsG0380017262.01.T01 MTR_4g019850 89.006 473 41 2 2 474 24 485 0.0 830
MsG0380017262.01.T01 MTR_3g104260 96.503 286 7 2 1 286 1 283 0.0 562
MsG0380017262.01.T01 MTR_3g097290 62.150 428 154 3 4 428 22 444 0.0 534
MsG0380017262.01.T01 MTR_8g095320 62.560 414 142 3 16 428 43 444 0.0 530
MsG0380017262.01.T01 MTR_3g097290 66.221 299 101 0 66 364 82 380 6.66e-148 427
MsG0380017262.01.T01 MTR_7g056307 55.224 67 28 1 362 428 75 139 6.37e-14 69.3
MsG0380017262.01.T01 MTR_4g087690 64.444 45 14 1 391 433 5 49 3.64e-12 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380017262.01.T02 AT5G26030 68.062 454 133 6 22 471 20 465 0.0 622
MsG0380017262.01.T02 AT5G26030 68.062 454 133 6 22 471 20 465 0.0 622
MsG0380017262.01.T02 AT2G30390 71.299 331 95 0 98 428 100 430 2.51e-178 509
MsG0380017262.01.T02 AT2G30390 69.208 341 95 1 98 428 100 440 5.01e-175 502
MsG0380017262.01.T01 AT5G26030 68.062 454 133 6 22 471 20 465 0.0 622
MsG0380017262.01.T01 AT5G26030 68.062 454 133 6 22 471 20 465 0.0 622
MsG0380017262.01.T01 AT2G30390 71.299 331 95 0 98 428 100 430 2.51e-178 509
MsG0380017262.01.T01 AT2G30390 69.208 341 95 1 98 428 100 440 5.01e-175 502

Find 60 sgRNAs with CRISPR-Local

Find 315 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATATGTTCTCGTACAAAATT+TGG 0.154477 3:-94193617 None:intergenic
CCTGAACGCAGTTATCATTT+TGG 0.180819 3:-94197310 None:intergenic
GAACATATTCGTTCGTGATT+TGG 0.259393 3:+94193632 MsG0380017262.01.T01:five_prime_UTR
AGTTCTCTATGTATTATATC+TGG 0.285319 3:-94197440 None:intergenic
ATATGTTATTAAAAGGAAAA+TGG 0.310581 3:-94193712 None:intergenic
ATCTTGGCGAAGTATTTAAC+TGG 0.311532 3:-94197246 None:intergenic
GGAAGGAATATGTTATTAAA+AGG 0.313396 3:-94193719 None:intergenic
TTGAATCTGGCATCAAGAAT+TGG 0.321498 3:+94197094 MsG0380017262.01.T01:CDS
ACATCTATGAAATCAAATTC+AGG 0.348405 3:-94197358 None:intergenic
AGTACAAGTGGTAAACTGTT+TGG 0.352485 3:-94197500 None:intergenic
TGGGCACGTGTCCCGGCTCT+TGG 0.364586 3:+94197114 MsG0380017262.01.T01:CDS
TACCAGCACCTCTGAAGATA+TGG 0.387408 3:+94197215 MsG0380017262.01.T01:CDS
AGGGAATTGGCTCTTGAATC+TGG 0.388268 3:+94197081 MsG0380017262.01.T01:CDS
GTACAAGTGGTAAACTGTTT+GGG 0.408812 3:-94197499 None:intergenic
TGAATCTGGCATCAAGAATT+GGG 0.420289 3:+94197095 MsG0380017262.01.T01:CDS
TGACATGGAGTACAGGGAAT+TGG 0.432816 3:+94197068 MsG0380017262.01.T01:CDS
CCAAAATGATAACTGCGTTC+AGG 0.433243 3:+94197310 MsG0380017262.01.T01:CDS
GTGAAAATCTGCGGCGATGA+AGG 0.433755 3:-94193849 None:intergenic
ATCCATATCTTCAGAGGTGC+TGG 0.440328 3:-94197217 None:intergenic
CAAGAATTGGGCACGTGTCC+CGG 0.442821 3:+94197107 MsG0380017262.01.T01:CDS
GAGTGCGTTCATAACTGAAA+TGG 0.452304 3:-94193788 None:intergenic
AAGAAATTGACATGGAGTAC+AGG 0.459008 3:+94197061 MsG0380017262.01.T01:CDS
AAGGGGTGAGACCAAGAGCC+GGG 0.475278 3:-94197125 None:intergenic
AGAGTTGGTCGGCGTGGGTG+AGG 0.491302 3:-94193744 None:intergenic
TATCTTCAGAGGTGCTGGTA+GGG 0.493651 3:-94197212 None:intergenic
CTGCGGCGATGAAGGGATTG+AGG 0.499797 3:-94193841 None:intergenic
GAAGGGGTGAGACCAAGAGC+CGG 0.510828 3:-94197126 None:intergenic
ATCTGCAAGATCCGTGATGA+AGG 0.515014 3:-94197148 None:intergenic
GCATTTATTGCTGCTGCCGA+TGG 0.517268 3:-94197189 None:intergenic
TTGGTCGGCGTGGGTGAGGA+AGG 0.519954 3:-94193740 None:intergenic
ATCTTCAGAGGTGCTGGTAG+GGG 0.525267 3:-94197211 None:intergenic
AGGGATTGAGGGTATCGGTT+GGG 0.525449 3:-94193829 None:intergenic
TTGGAAAGAGTTGGTCGGCG+TGG 0.532518 3:-94193750 None:intergenic
GTTATTAAAAGGAAAATGGT+TGG 0.532781 3:-94193708 None:intergenic
GCAAGATCCGTGATGAAGGA+AGG 0.537438 3:-94197144 None:intergenic
GTCTTTATCCATATCTTCAG+AGG 0.540172 3:-94197223 None:intergenic
GTTGTATAGATTAGTACAAG+TGG 0.541939 3:-94197512 None:intergenic
TGAAAATCTGCGGCGATGAA+GGG 0.543413 3:-94193848 None:intergenic
AGAGAACTTGAATGTCAGCT+TGG 0.543597 3:+94197455 MsG0380017262.01.T01:three_prime_UTR
TCGGCGTGGGTGAGGAAGGA+AGG 0.546098 3:-94193736 None:intergenic
TGCGGCGATGAAGGGATTGA+GGG 0.547203 3:-94193840 None:intergenic
TGGAAAGAGTTGGTCGGCGT+GGG 0.554554 3:-94193749 None:intergenic
AAGGGATTGAGGGTATCGGT+TGG 0.567491 3:-94193830 None:intergenic
CAAGATCCGTGATGAAGGAA+GGG 0.571796 3:-94197143 None:intergenic
AGAAATTGACATGGAGTACA+GGG 0.578767 3:+94197062 MsG0380017262.01.T01:CDS
TCTATGTATTATATCTGGAA+AGG 0.579561 3:-94197435 None:intergenic
ATATCTTCAGAGGTGCTGGT+AGG 0.580852 3:-94197213 None:intergenic
CATCACGGATCTTGCAGATG+CGG 0.601658 3:+94197152 MsG0380017262.01.T01:CDS
TCTCACCCCTTCCTTCATCA+CGG 0.601963 3:+94197137 MsG0380017262.01.T01:CDS
GACTCTTGAAGAAATTGACA+TGG 0.603916 3:+94197053 MsG0380017262.01.T01:CDS
AAGATCCGTGATGAAGGAAG+GGG 0.606889 3:-94197142 None:intergenic
ACGACGACGTTGGAAAGAGT+TGG 0.607940 3:-94193759 None:intergenic
GTTGGCGTGTACGTCAAAGA+TGG 0.646233 3:-94193690 None:intergenic
TCTTGGCGAAGTATTTAACT+GGG 0.647791 3:-94197245 None:intergenic
GATGAAGGGATTGAGGGTAT+CGG 0.652118 3:-94193834 None:intergenic
TCTATGAAATCAAATTCAGG+TGG 0.664584 3:-94197355 None:intergenic
GGTGATAGAAGCTCTACCAT+CGG 0.665588 3:+94197173 MsG0380017262.01.T01:CDS
CGACGTTGGAAAGAGTTGGT+CGG 0.676199 3:-94193755 None:intergenic
TCTGGAAAGGAGTAAAACCA+AGG 0.677046 3:-94197422 None:intergenic
ATGCTTACAGTGAAAATCTG+CGG 0.737539 3:-94193858 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATAGAAAGAAAAAAAT+TGG - Chr3:94196506-94196525 None:intergenic 10.0%
!! TCTAATATATGTAAAATAAT+TGG + Chr3:94194097-94194116 MsG0380017262.01.T01:intron 10.0%
!!! ATTTATTGTATTTTATTGAT+TGG + Chr3:94194955-94194974 MsG0380017262.01.T01:intron 10.0%
!!! CTGATAATTATTTTTAAAAA+TGG - Chr3:94195456-94195475 None:intergenic 10.0%
!!! TTATTTTACATATATTAGAA+TGG - Chr3:94194096-94194115 None:intergenic 10.0%
!!! TTTATTTTATAGAAAATAAC+AGG - Chr3:94195580-94195599 None:intergenic 10.0%
!! AAAAAAAAATAACAGTGTTA+CGG + Chr3:94195597-94195616 MsG0380017262.01.T01:intron 15.0%
!! AAGAAAAGTAAAAATGAAAT+AGG - Chr3:94193944-94193963 None:intergenic 15.0%
!! ACATTTGATATAAAATGTAT+AGG - Chr3:94195777-94195796 None:intergenic 15.0%
!! AGAAAAGTAAAAATGAAATA+GGG - Chr3:94193943-94193962 None:intergenic 15.0%
!! ATATGTTATTAAAAGGAAAA+TGG - Chr3:94193715-94193734 None:intergenic 15.0%
!! GTATCAATAACTTAAATAAA+TGG - Chr3:94195835-94195854 None:intergenic 15.0%
!!! TGACTTTTTTATTTTGTTTT+TGG + Chr3:94193658-94193677 MsG0380017262.01.T01:five_prime_UTR 15.0%
!!! TTTATTTAAGTTATTGATAC+AGG + Chr3:94195835-94195854 MsG0380017262.01.T01:intron 15.0%
!!! TTTGTTTATGTTTTATGTAA+TGG + Chr3:94194984-94195003 MsG0380017262.01.T01:intron 15.0%
!!! TTTTTTTCTTTCTATTTTTC+AGG + Chr3:94196507-94196526 MsG0380017262.01.T01:intron 15.0%
!! TAACAATAAACCCAAATTTA+AGG - Chr3:94195906-94195925 None:intergenic 20.0%
!! TATTGATATAGGATATCATT+CGG + Chr3:94195131-94195150 MsG0380017262.01.T01:intron 20.0%
!! TTTGGTAGAATATTGTATAA+TGG + Chr3:94194783-94194802 MsG0380017262.01.T01:intron 20.0%
!!! ACTGATACTATTTAATTTTC+AGG + Chr3:94196138-94196157 MsG0380017262.01.T01:intron 20.0%
!!! ATACTTCATTTTTTTTTCCT+TGG + Chr3:94197405-94197424 MsG0380017262.01.T01:three_prime_UTR 20.0%
!!! ATATTGTATAATGGAATACA+TGG + Chr3:94194792-94194811 MsG0380017262.01.T01:intron 20.0%
!!! CTGATACTATTTAATTTTCA+GGG + Chr3:94196139-94196158 MsG0380017262.01.T01:intron 20.0%
!!! TCATTTTTATGCTAATTGTT+TGG + Chr3:94194490-94194509 MsG0380017262.01.T01:intron 20.0%
!!! TGTTTACTTAAATTGATTTC+CGG - Chr3:94194713-94194732 None:intergenic 20.0%
! AAAAATCTCTAAATCATGCA+AGG - Chr3:94196081-94196100 None:intergenic 25.0%
! AAAATCTCTAAATCATGCAA+GGG - Chr3:94196080-94196099 None:intergenic 25.0%
! AATGGAAATAACATCTTTCA+TGG + Chr3:94195625-94195644 MsG0380017262.01.T01:intron 25.0%
! AATTCTCTCAATAAATCTCA+TGG + Chr3:94193971-94193990 MsG0380017262.01.T01:intron 25.0%
! ACATCTATGAAATCAAATTC+AGG - Chr3:94197361-94197380 None:intergenic 25.0%
! AGAAGGTTATATTAAGTCAA+TGG + Chr3:94196217-94196236 MsG0380017262.01.T01:CDS 25.0%
! AGGGAAAACAAAAATAAGAA+AGG - Chr3:94195315-94195334 None:intergenic 25.0%
! AGGTTCAGAAAAAAAATCAT+AGG - Chr3:94196417-94196436 None:intergenic 25.0%
! AGTAAAAATGAAATAGGGTT+TGG - Chr3:94193938-94193957 None:intergenic 25.0%
! AGTTCTCTATGTATTATATC+TGG - Chr3:94197443-94197462 None:intergenic 25.0%
! ATATGTTCTCGTACAAAATT+TGG - Chr3:94193620-94193639 None:intergenic 25.0%
! ATGGAAATAACATCTTTCAT+GGG + Chr3:94195626-94195645 MsG0380017262.01.T01:intron 25.0%
! CAATAAAAATGTCAGATACA+GGG - Chr3:94196808-94196827 None:intergenic 25.0%
! GGAAGGAATATGTTATTAAA+AGG - Chr3:94193722-94193741 None:intergenic 25.0%
! GTTATTAAAAGGAAAATGGT+TGG - Chr3:94193711-94193730 None:intergenic 25.0%
! TCTATGTATTATATCTGGAA+AGG - Chr3:94197438-94197457 None:intergenic 25.0%
! TCTCTTCAAATATCTATGTT+GGG + Chr3:94195703-94195722 MsG0380017262.01.T01:CDS 25.0%
! TGAGATTTATTGAGAGAATT+TGG - Chr3:94193971-94193990 None:intergenic 25.0%
! TTGAATGTAATCATGTATGT+CGG - Chr3:94195427-94195446 None:intergenic 25.0%
! TTGATACCAAGAGTTTATAA+TGG - Chr3:94196195-94196214 None:intergenic 25.0%
! TTTGTATTCTTGCTTTCTTT+GGG + Chr3:94196773-94196792 MsG0380017262.01.T01:intron 25.0%
!! AATACGTTTTCCTTAAAACT+CGG + Chr3:94196308-94196327 MsG0380017262.01.T01:intron 25.0%
!! CATTTTGTCACCTTAAATTT+GGG + Chr3:94195893-94195912 MsG0380017262.01.T01:intron 25.0%
!! GTTTACTTAAATTGATTTCC+GGG - Chr3:94194712-94194731 None:intergenic 25.0%
!! TAAATGTCAATCATGAGTTT+TGG + Chr3:94194765-94194784 MsG0380017262.01.T01:intron 25.0%
!! TATCTGACATTTTTATTGGA+TGG + Chr3:94196810-94196829 MsG0380017262.01.T01:intron 25.0%
!! TATGTCTCTTGTATTGATAT+AGG + Chr3:94195120-94195139 MsG0380017262.01.T01:intron 25.0%
!!! TGTATTTTATTGATTGGTGT+AGG + Chr3:94194961-94194980 MsG0380017262.01.T01:intron 25.0%
AACTGAACCAAAAAACATCT+TGG - Chr3:94197265-94197284 None:intergenic 30.0%
AACTGTTGTATATTGATCAC+TGG + Chr3:94195011-94195030 MsG0380017262.01.T01:intron 30.0%
ACATAGCCAAACAACATATA+AGG - Chr3:94195335-94195354 None:intergenic 30.0%
ACTGTTGTATATTGATCACT+GGG + Chr3:94195012-94195031 MsG0380017262.01.T01:intron 30.0%
AGAAAAAAATTGGTATGCCA+CGG - Chr3:94196496-94196515 None:intergenic 30.0%
AGAATGGTCAATTGAAAAGA+AGG - Chr3:94194080-94194099 None:intergenic 30.0%
ATATAGAAAACTGGGGATAA+AGG - Chr3:94195987-94196006 None:intergenic 30.0%
ATGTGATTTCAATTTCTTGG+TGG + Chr3:94194851-94194870 MsG0380017262.01.T01:intron 30.0%
CAAACCAGCTATTAATTGAA+CGG - Chr3:94196757-94196776 None:intergenic 30.0%
CAACATAGATATTTGAAGAG+AGG - Chr3:94195704-94195723 None:intergenic 30.0%
CAATAAGCTATCGTAGTAAA+AGG - Chr3:94196960-94196979 None:intergenic 30.0%
CATAGCCAAACAACATATAA+GGG - Chr3:94195334-94195353 None:intergenic 30.0%
CCAATAAAAATGTCAGATAC+AGG - Chr3:94196809-94196828 None:intergenic 30.0%
CTCTCTTCAAATATCTATGT+TGG + Chr3:94195702-94195721 MsG0380017262.01.T01:CDS 30.0%
CTGTTTCCATTATAAACTCT+TGG + Chr3:94196186-94196205 MsG0380017262.01.T01:CDS 30.0%
GAATGGTCAATTGAAAAGAA+GGG - Chr3:94194079-94194098 None:intergenic 30.0%
GTCATGTGATTTCAATTTCT+TGG + Chr3:94194848-94194867 MsG0380017262.01.T01:intron 30.0%
GTTGTATAGATTAGTACAAG+TGG - Chr3:94197515-94197534 None:intergenic 30.0%
GTTTGTATTCTTGCTTTCTT+TGG + Chr3:94196772-94196791 MsG0380017262.01.T01:intron 30.0%
TAGGGTTTGGAAATAATTGA+AGG - Chr3:94193925-94193944 None:intergenic 30.0%
TATAGAAAACTGGGGATAAA+GGG - Chr3:94195986-94196005 None:intergenic 30.0%
TCTATGAAATCAAATTCAGG+TGG - Chr3:94197358-94197377 None:intergenic 30.0%
TCTTGTGTGATAGATTAAGA+AGG + Chr3:94195933-94195952 MsG0380017262.01.T01:intron 30.0%
TGCAAAAACAAGTAACATAC+AGG - Chr3:94194438-94194457 None:intergenic 30.0%
TGTGATTTCAATTTCTTGGT+GGG + Chr3:94194852-94194871 MsG0380017262.01.T01:intron 30.0%
TTAAGAAGGATGGAATAACA+AGG + Chr3:94195947-94195966 MsG0380017262.01.T01:CDS 30.0%
! AAAGAAGCATATGCTTCTAT+TGG + Chr3:94195226-94195245 MsG0380017262.01.T01:CDS 30.0%
! AATAGAAGCATATGCTTCTT+TGG - Chr3:94195227-94195246 None:intergenic 30.0%
! AGTTTTCTATATCCACTACT+GGG + Chr3:94195995-94196014 MsG0380017262.01.T01:CDS 30.0%
! CAAGAGTTTATAATGGAAAC+AGG - Chr3:94196188-94196207 None:intergenic 30.0%
! CCAAATTTAAGGTGACAAAA+TGG - Chr3:94195895-94195914 None:intergenic 30.0%
! CCATTTTGTCACCTTAAATT+TGG + Chr3:94195892-94195911 MsG0380017262.01.T01:intron 30.0%
! CCTGTATCTGACATTTTTAT+TGG + Chr3:94196806-94196825 MsG0380017262.01.T01:intron 30.0%
! CTTTTACTACGATAGCTTAT+TGG + Chr3:94196958-94196977 MsG0380017262.01.T01:intron 30.0%
! GTAGATATCAGTTTTGCTAA+TGG - Chr3:94195187-94195206 None:intergenic 30.0%
! GTTTTCCCTTATATGTTGTT+TGG + Chr3:94195326-94195345 MsG0380017262.01.T01:intron 30.0%
! TCATCTGTAATTTTGCGTAA+AGG - Chr3:94195262-94195281 None:intergenic 30.0%
! TCTAATATTAGCTTAGATCC+CGG + Chr3:94194691-94194710 MsG0380017262.01.T01:intron 30.0%
! TTTTTCTGAACCTGTTAGTA+GGG + Chr3:94196424-94196443 MsG0380017262.01.T01:intron 30.0%
!! AGTAGTGGATATAGAAAACT+GGG - Chr3:94195995-94196014 None:intergenic 30.0%
!!! ATAATTGGTTTGTGCTTTTC+AGG + Chr3:94194112-94194131 MsG0380017262.01.T01:intron 30.0%
!!! ATGATATTTTTTAGTGCCCA+TGG + Chr3:94196532-94196551 MsG0380017262.01.T01:CDS 30.0%
!!! GATGTTTTTTGGTTCAGTTT+TGG + Chr3:94197266-94197285 MsG0380017262.01.T01:CDS 30.0%
!!! TTTTTTCTGAACCTGTTAGT+AGG + Chr3:94196423-94196442 MsG0380017262.01.T01:intron 30.0%
AAAGACTCTTTACACCTTTC+TGG - Chr3:94196906-94196925 None:intergenic 35.0%
AACAGTGTTACGGTTTAGAA+TGG + Chr3:94195607-94195626 MsG0380017262.01.T01:intron 35.0%
AACTCTTGGTATCAAAGAGA+AGG + Chr3:94196200-94196219 MsG0380017262.01.T01:CDS 35.0%
AAGAAATTGACATGGAGTAC+AGG + Chr3:94197061-94197080 MsG0380017262.01.T01:CDS 35.0%
ACGTATTCAATACAAGTGGA+TGG - Chr3:94196376-94196395 None:intergenic 35.0%
ACTAGGACTTCATCTGTATA+TGG - Chr3:94196874-94196893 None:intergenic 35.0%
AGAAATTGACATGGAGTACA+GGG + Chr3:94197062-94197081 MsG0380017262.01.T01:CDS 35.0%
AGTACAAGTGGTAAACTGTT+TGG - Chr3:94197503-94197522 None:intergenic 35.0%
AGTAGTAAGGCCATTATAAG+TGG - Chr3:94194301-94194320 None:intergenic 35.0%
ATAGAAAACTGGGGATAAAG+GGG - Chr3:94195985-94196004 None:intergenic 35.0%
ATGCTTACAGTGAAAATCTG+CGG - Chr3:94193861-94193880 None:intergenic 35.0%
ATTCAATACAAGTGGATGGT+GGG - Chr3:94196372-94196391 None:intergenic 35.0%
CAAAAAAATTGAACTGCACC+TGG - Chr3:94195285-94195304 None:intergenic 35.0%
CAAATATCTATGTTGGGATG+CGG + Chr3:94195709-94195728 MsG0380017262.01.T01:CDS 35.0%
CAACACACCAACTTTATCTT+GGG - Chr3:94194346-94194365 None:intergenic 35.0%
CTCTTCAAGAGAATACTTTG+TGG + Chr3:94195548-94195567 MsG0380017262.01.T01:intron 35.0%
GAACATATTCGTTCGTGATT+TGG + Chr3:94193632-94193651 MsG0380017262.01.T01:five_prime_UTR 35.0%
GAATTGCTTCTTCAGTGAAT+GGG - Chr3:94195743-94195762 None:intergenic 35.0%
GACTCTTGAAGAAATTGACA+TGG + Chr3:94197053-94197072 MsG0380017262.01.T01:CDS 35.0%
GATCTGCGAAAAGATTAAAG+AGG - Chr3:94194416-94194435 None:intergenic 35.0%
GCATATGCTTCTTTGGATTT+AGG - Chr3:94195220-94195239 None:intergenic 35.0%
GCGAAAAGATTAAAGAGGAA+AGG - Chr3:94194411-94194430 None:intergenic 35.0%
GTACAAGTGGTAAACTGTTT+GGG - Chr3:94197502-94197521 None:intergenic 35.0%
GTAGGGCTTACAAAATTCAA+AGG + Chr3:94196441-94196460 MsG0380017262.01.T01:intron 35.0%
GTCTTTATCCATATCTTCAG+AGG - Chr3:94197226-94197245 None:intergenic 35.0%
GTGTGATAGATTAAGAAGGA+TGG + Chr3:94195937-94195956 MsG0380017262.01.T01:intron 35.0%
TAGATAGGCTCCTACTAATT+AGG - Chr3:94194552-94194571 None:intergenic 35.0%
TATTCAATACAAGTGGATGG+TGG - Chr3:94196373-94196392 None:intergenic 35.0%
TCAGTTATGTTGAGAATGCT+GGG + Chr3:94196563-94196582 MsG0380017262.01.T01:CDS 35.0%
TCCAACGTATTCAATACAAG+TGG - Chr3:94196380-94196399 None:intergenic 35.0%
TCCACTTGTATTGAATACGT+TGG + Chr3:94196376-94196395 MsG0380017262.01.T01:intron 35.0%
TGAATCTGGCATCAAGAATT+GGG + Chr3:94197095-94197114 MsG0380017262.01.T01:CDS 35.0%
TGAATTGCTTCTTCAGTGAA+TGG - Chr3:94195744-94195763 None:intergenic 35.0%
TGTACCGTTCAATTAATAGC+TGG + Chr3:94196750-94196769 MsG0380017262.01.T01:intron 35.0%
TGTATTGAATACGTTGGACA+TGG + Chr3:94196382-94196401 MsG0380017262.01.T01:intron 35.0%
TTACGTGTTAGTGTCATATC+TGG + Chr3:94195479-94195498 MsG0380017262.01.T01:intron 35.0%
TTGAATCTGGCATCAAGAAT+TGG + Chr3:94197094-94197113 MsG0380017262.01.T01:CDS 35.0%
TTGTAACAAGTCTACATCTC+AGG + Chr3:94194188-94194207 MsG0380017262.01.T01:CDS 35.0%
TTTATGCTAATTGTTTGGCG+CGG + Chr3:94194495-94194514 MsG0380017262.01.T01:intron 35.0%
TTTCCTTAAAACTCGGTATC+CGG + Chr3:94196315-94196334 MsG0380017262.01.T01:intron 35.0%
! ATCTTGGCGAAGTATTTAAC+TGG - Chr3:94197249-94197268 None:intergenic 35.0%
! ATTTTGTAAGCCCTACTAAC+AGG - Chr3:94196437-94196456 None:intergenic 35.0%
! CAGTTTTCTATATCCACTAC+TGG + Chr3:94195994-94196013 MsG0380017262.01.T01:CDS 35.0%
! CTGAACGCAGTTATCATTTT+GGG - Chr3:94197312-94197331 None:intergenic 35.0%
! TCTTGGCGAAGTATTTAACT+GGG - Chr3:94197248-94197267 None:intergenic 35.0%
!! CAGTAGTGGATATAGAAAAC+TGG - Chr3:94195996-94196015 None:intergenic 35.0%
!! GTAGTGGATATAGAAAACTG+GGG - Chr3:94195994-94196013 None:intergenic 35.0%
!!! TACTTCGCCAAGATGTTTTT+TGG + Chr3:94197255-94197274 MsG0380017262.01.T01:CDS 35.0%
AAAACTGATATCTACGCTCC+GGG + Chr3:94195192-94195211 MsG0380017262.01.T01:CDS 40.0%
AATCCGAGTAGCAAGTAACA+CGG - Chr3:94194170-94194189 None:intergenic 40.0%
ACACAATCTTGTGTTTGTGC+TGG + Chr3:94194658-94194677 MsG0380017262.01.T01:intron 40.0%
ACGCAAAATTACAGATGACC+AGG + Chr3:94195264-94195283 MsG0380017262.01.T01:CDS 40.0%
ACTTGCACTTAAAAGGGCTT+TGG + Chr3:94195668-94195687 MsG0380017262.01.T01:CDS 40.0%
AGAATAAAACTCACCTCCCT+TGG - Chr3:94196281-94196300 None:intergenic 40.0%
AGAGAACTTGAATGTCAGCT+TGG + Chr3:94197455-94197474 MsG0380017262.01.T01:three_prime_UTR 40.0%
AGATTGTGTGAGCCTCAATT+AGG - Chr3:94194647-94194666 None:intergenic 40.0%
AGGCTCCTACTAATTAGGAA+GGG - Chr3:94194547-94194566 None:intergenic 40.0%
ATAACTGACAGGAACACCAT+GGG - Chr3:94196551-94196570 None:intergenic 40.0%
ATGCAGGAATTGAAAGCTAG+AGG + Chr3:94196628-94196647 MsG0380017262.01.T01:CDS 40.0%
ATGGAATACATGGTTGTGCT+AGG + Chr3:94194802-94194821 MsG0380017262.01.T01:intron 40.0%
ATGGTTTCAACCACTGTACA+GGG - Chr3:94196855-94196874 None:intergenic 40.0%
CAAAACTGATATCTACGCTC+CGG + Chr3:94195191-94195210 MsG0380017262.01.T01:CDS 40.0%
CAGTTATGTTGAGAATGCTG+GGG + Chr3:94196564-94196583 MsG0380017262.01.T01:CDS 40.0%
CCAAAATGATAACTGCGTTC+AGG + Chr3:94197310-94197329 MsG0380017262.01.T01:CDS 40.0%
CTCAAGCTCAAATCAGAAGA+TGG - Chr3:94196718-94196737 None:intergenic 40.0%
CTGCCATAATTTGGTAGGAT+GGG + Chr3:94194739-94194758 MsG0380017262.01.T01:intron 40.0%
GAAGCATATGCTTCTATTGG+AGG + Chr3:94195229-94195248 MsG0380017262.01.T01:CDS 40.0%
GAGTGCGTTCATAACTGAAA+TGG - Chr3:94193791-94193810 None:intergenic 40.0%
GCAACACACCAACTTTATCT+TGG - Chr3:94194347-94194366 None:intergenic 40.0%
GCACATGCAACCACTTATAA+TGG + Chr3:94194288-94194307 MsG0380017262.01.T01:CDS 40.0%
GCATTCTCAACATAACTGAC+AGG - Chr3:94196562-94196581 None:intergenic 40.0%
GCCAGCAAATGTCAATAGAT+AGG - Chr3:94194567-94194586 None:intergenic 40.0%
GCCTATCTATTGACATTTGC+TGG + Chr3:94194563-94194582 MsG0380017262.01.T01:intron 40.0%
GCTGTTCTGATATTGCATCT+GGG + Chr3:94194585-94194604 MsG0380017262.01.T01:intron 40.0%
GGAGAAACCGAAACAATCTT+GGG - Chr3:94195159-94195178 None:intergenic 40.0%
GGGAAGATGCTTATTTGTCT+AGG + Chr3:94196159-94196178 MsG0380017262.01.T01:intron 40.0%
GTCAGTTATGTTGAGAATGC+TGG + Chr3:94196562-94196581 MsG0380017262.01.T01:CDS 40.0%
GTTAGTGTCATATCTGGTGT+AGG + Chr3:94195485-94195504 MsG0380017262.01.T01:intron 40.0%
TAGGAGATTGCACAGTAGTA+AGG - Chr3:94194314-94194333 None:intergenic 40.0%
TAGGCTCCTACTAATTAGGA+AGG - Chr3:94194548-94194567 None:intergenic 40.0%
TATGGTTTCAACCACTGTAC+AGG - Chr3:94196856-94196875 None:intergenic 40.0%
TCTGGAAAGGAGTAAAACCA+AGG - Chr3:94197425-94197444 None:intergenic 40.0%
TGAGCGAGAAACTAAGTTTC+TGG - Chr3:94194259-94194278 None:intergenic 40.0%
TGGAGAAACCGAAACAATCT+TGG - Chr3:94195160-94195179 None:intergenic 40.0%
TTACCCCCTTCCTAATTAGT+AGG + Chr3:94194539-94194558 MsG0380017262.01.T01:intron 40.0%
! CCTGAACGCAGTTATCATTT+TGG - Chr3:94197313-94197332 None:intergenic 40.0%
! CTAATGATAGTGTACCTCAC+TGG - Chr3:94196937-94196956 None:intergenic 40.0%
! TCAGTTTTGCTAATGGTTGC+TGG - Chr3:94195180-94195199 None:intergenic 40.0%
! TCTGGTGCCAATTCTTGTAT+TGG - Chr3:94194241-94194260 None:intergenic 40.0%
! TTTTACTCCAATCTGAACCG+TGG + Chr3:94196476-94196495 MsG0380017262.01.T01:intron 40.0%
!! AAAAGGGCTTTGGAAGCAAA+GGG + Chr3:94195678-94195697 MsG0380017262.01.T01:CDS 40.0%
!! ACAAGAGTGCTGCCATAATT+TGG + Chr3:94194730-94194749 MsG0380017262.01.T01:intron 40.0%
!! CATCTGGGTTCTTAGTTTGT+TGG + Chr3:94194600-94194619 MsG0380017262.01.T01:intron 40.0%
!! TAAAAGGGCTTTGGAAGCAA+AGG + Chr3:94195677-94195696 MsG0380017262.01.T01:CDS 40.0%
!!! TGTGACGTTTTGGAGAGATT+GGG + Chr3:94194926-94194945 MsG0380017262.01.T01:intron 40.0%
!!! TTGTGACGTTTTGGAGAGAT+TGG + Chr3:94194925-94194944 MsG0380017262.01.T01:intron 40.0%
AACGCTCAGGTACTATGTAG+TGG + Chr3:94196041-94196060 MsG0380017262.01.T01:intron 45.0%
AAGATCCGTGATGAAGGAAG+GGG - Chr3:94197145-94197164 None:intergenic 45.0%
ATCCGAGTAGCAAGTAACAC+GGG - Chr3:94194169-94194188 None:intergenic 45.0%
ATCTGCAAGATCCGTGATGA+AGG - Chr3:94197151-94197170 None:intergenic 45.0%
ATTGGACCCCTCGGAATAAT+CGG - Chr3:94196349-94196368 None:intergenic 45.0%
CAAGAACCGATTATTCCGAG+GGG + Chr3:94196340-94196359 MsG0380017262.01.T01:intron 45.0%
CAAGATCCGTGATGAAGGAA+GGG - Chr3:94197146-94197165 None:intergenic 45.0%
CATAACTGACAGGAACACCA+TGG - Chr3:94196552-94196571 None:intergenic 45.0%
CCAAAGAGAAGATAGACCAC+TGG - Chr3:94195049-94195068 None:intergenic 45.0%
CCAAGAACCGATTATTCCGA+GGG + Chr3:94196339-94196358 MsG0380017262.01.T01:intron 45.0%
CCAGTGGTCTATCTTCTCTT+TGG + Chr3:94195046-94195065 MsG0380017262.01.T01:intron 45.0%
CTTCTTTGGATTTAGGAGCC+CGG - Chr3:94195213-94195232 None:intergenic 45.0%
CTTGTTTGGCTATGTAGCAC+TGG + Chr3:94195367-94195386 MsG0380017262.01.T01:intron 45.0%
GATGAAGTCCTAGTTGAGCT+TGG + Chr3:94196880-94196899 MsG0380017262.01.T01:CDS 45.0%
GCAGGCACTTGCACTTAAAA+GGG + Chr3:94195662-94195681 MsG0380017262.01.T01:intron 45.0%
GCATATGCTTCTATTGGAGG+TGG + Chr3:94195232-94195251 MsG0380017262.01.T01:CDS 45.0%
GCTCCTACTAATTAGGAAGG+GGG - Chr3:94194545-94194564 None:intergenic 45.0%
GCTGCCATAATTTGGTAGGA+TGG + Chr3:94194738-94194757 MsG0380017262.01.T01:intron 45.0%
GGATCCATACCGAGATCAAA+TGG + Chr3:94196585-94196604 MsG0380017262.01.T01:CDS 45.0%
GGCTCCTACTAATTAGGAAG+GGG - Chr3:94194546-94194565 None:intergenic 45.0%
GGCTCGACCAATACAAGAAT+TGG + Chr3:94194231-94194250 MsG0380017262.01.T01:CDS 45.0%
GGCTGTTCTGATATTGCATC+TGG + Chr3:94194584-94194603 MsG0380017262.01.T01:intron 45.0%
GGTGATAGAAGCTCTACCAT+CGG + Chr3:94197173-94197192 MsG0380017262.01.T01:CDS 45.0%
GTGCATCTTCTTGATCATGC+AGG + Chr3:94196612-94196631 MsG0380017262.01.T01:CDS 45.0%
GTTGTTTGGCTATGTAGCAC+TGG + Chr3:94195340-94195359 MsG0380017262.01.T01:intron 45.0%
TCCATACCGAGATCAAATGG+AGG + Chr3:94196588-94196607 MsG0380017262.01.T01:CDS 45.0%
TCCTCCATTTGATCTCGGTA+TGG - Chr3:94196592-94196611 None:intergenic 45.0%
TCGCCCATCCTACCAAATTA+TGG - Chr3:94194745-94194764 None:intergenic 45.0%
TGAAAATCTGCGGCGATGAA+GGG - Chr3:94193851-94193870 None:intergenic 45.0%
TGACATGGAGTACAGGGAAT+TGG + Chr3:94197068-94197087 MsG0380017262.01.T01:CDS 45.0%
TGAGCACACTCTTGCTTATC+AGG + Chr3:94196660-94196679 MsG0380017262.01.T01:CDS 45.0%
TGAGCCTCAATTAGGAACCT+AGG - Chr3:94194639-94194658 None:intergenic 45.0%
TGCACTCCTCCATTTGATCT+CGG - Chr3:94196597-94196616 None:intergenic 45.0%
TGCAGGCACTTGCACTTAAA+AGG + Chr3:94195661-94195680 MsG0380017262.01.T01:intron 45.0%
TGTGCCTAGGTTCCTAATTG+AGG + Chr3:94194632-94194651 MsG0380017262.01.T01:intron 45.0%
TTCGGCTCCCAAGATTGTTT+CGG + Chr3:94195149-94195168 MsG0380017262.01.T01:CDS 45.0%
TTGGTTGTAAGCATGTGCCT+AGG + Chr3:94194619-94194638 MsG0380017262.01.T01:intron 45.0%
! AGGGAATTGGCTCTTGAATC+TGG + Chr3:94197081-94197100 MsG0380017262.01.T01:CDS 45.0%
! ATCCATATCTTCAGAGGTGC+TGG - Chr3:94197220-94197239 None:intergenic 45.0%
! ATGGGTTCTGATGATCATGC+AGG + Chr3:94195644-94195663 MsG0380017262.01.T01:intron 45.0%
! ATTCTTGTATTGGTCGAGCC+AGG - Chr3:94194231-94194250 None:intergenic 45.0%
! CCTCGGAATAATCGGTTCTT+GGG - Chr3:94196341-94196360 None:intergenic 45.0%
! CGAGAGTTTTTCTGAGCCAA+GGG + Chr3:94196262-94196281 MsG0380017262.01.T01:CDS 45.0%
! CTCTAGATTGAAGGCATGTC+CGG + Chr3:94195392-94195411 MsG0380017262.01.T01:intron 45.0%
! GAGTGCTGCCATAATTTGGT+AGG + Chr3:94194734-94194753 MsG0380017262.01.T01:intron 45.0%
! GATGAAGGGATTGAGGGTAT+CGG - Chr3:94193837-94193856 None:intergenic 45.0%
! GTGGGTGCTGCAAGTTATTT+GGG + Chr3:94194870-94194889 MsG0380017262.01.T01:intron 45.0%
! GTTTGTTGAATTGCTGCTGC+TGG - Chr3:94194057-94194076 None:intergenic 45.0%
! TACCAGCACCTCTGAAGATA+TGG + Chr3:94197215-94197234 MsG0380017262.01.T01:CDS 45.0%
! TCGAGAGTTTTTCTGAGCCA+AGG + Chr3:94196261-94196280 MsG0380017262.01.T01:CDS 45.0%
! TGGGCATGTTTGTGACGTTT+TGG + Chr3:94194916-94194935 MsG0380017262.01.T01:intron 45.0%
!! ATACAAGTGGATGGTGGGAT+TGG - Chr3:94196367-94196386 None:intergenic 45.0%
!! ATATCTTCAGAGGTGCTGGT+AGG - Chr3:94197216-94197235 None:intergenic 45.0%
!! GTCTTTTAGCTGTTCCAGTG+AGG + Chr3:94196920-94196939 MsG0380017262.01.T01:CDS 45.0%
!! TACCCGTGTTACTTGCTACT+CGG + Chr3:94194164-94194183 MsG0380017262.01.T01:CDS 45.0%
!! TATCTTCAGAGGTGCTGGTA+GGG - Chr3:94197215-94197234 None:intergenic 45.0%
!! TGTATGTCGGTGTCAAACAC+CGG - Chr3:94195414-94195433 None:intergenic 45.0%
!!! GCATCCTTGTTTTTGTGTCC+TGG + Chr3:94194210-94194229 MsG0380017262.01.T01:CDS 45.0%
!!! GTGACGTTTTGGAGAGATTG+GGG + Chr3:94194927-94194946 MsG0380017262.01.T01:intron 45.0%
AACAGTAGAACCTGGGGGTT+GGG + Chr3:94194897-94194916 MsG0380017262.01.T01:intron 50.0%
ACGACGACGTTGGAAAGAGT+TGG - Chr3:94193762-94193781 None:intergenic 50.0%
ACTGATGCTTGACCCAGTAG+TGG - Chr3:94196010-94196029 None:intergenic 50.0%
ATGCTAATTGTTTGGCGCGG+AGG + Chr3:94194498-94194517 MsG0380017262.01.T01:intron 50.0%
CACGCTGCCCAAGATAAAGT+TGG + Chr3:94194336-94194355 MsG0380017262.01.T01:CDS 50.0%
CATCACGGATCTTGCAGATG+CGG + Chr3:94197152-94197171 MsG0380017262.01.T01:CDS 50.0%
CCCAAGAACCGATTATTCCG+AGG + Chr3:94196338-94196357 MsG0380017262.01.T01:intron 50.0%
CGAGCCAGGACACAAAAACA+AGG - Chr3:94194217-94194236 None:intergenic 50.0%
CTAGTTGAGCTTGGCCAGAA+AGG + Chr3:94196889-94196908 MsG0380017262.01.T01:CDS 50.0%
GATTTGAGCTTGAGCAGAGC+AGG + Chr3:94196724-94196743 MsG0380017262.01.T01:intron 50.0%
GCAAGATCCGTGATGAAGGA+AGG - Chr3:94197147-94197166 None:intergenic 50.0%
GCATTTATTGCTGCTGCCGA+TGG - Chr3:94197192-94197211 None:intergenic 50.0%
GGATGGAATAACAAGGCTCG+TGG + Chr3:94195954-94195973 MsG0380017262.01.T01:CDS 50.0%
GGGTGCTAACAGTAGAACCT+GGG + Chr3:94194890-94194909 MsG0380017262.01.T01:intron 50.0%
GGTGCTAACAGTAGAACCTG+GGG + Chr3:94194891-94194910 MsG0380017262.01.T01:intron 50.0%
GTGAAAATCTGCGGCGATGA+AGG - Chr3:94193852-94193871 None:intergenic 50.0%
GTGCTAACAGTAGAACCTGG+GGG + Chr3:94194892-94194911 MsG0380017262.01.T01:intron 50.0%
GTTGGCGTGTACGTCAAAGA+TGG - Chr3:94193693-94193712 None:intergenic 50.0%
TAACAGTAGAACCTGGGGGT+TGG + Chr3:94194896-94194915 MsG0380017262.01.T01:intron 50.0%
TCTATGTTGGGATGCGGTAC+TGG + Chr3:94195715-94195734 MsG0380017262.01.T01:CDS 50.0%
TCTCACCCCTTCCTTCATCA+CGG + Chr3:94197137-94197156 MsG0380017262.01.T01:CDS 50.0%
TGGGTCAAGCATCAGTGTTC+TGG + Chr3:94196014-94196033 MsG0380017262.01.T01:CDS 50.0%
TGGGTGCTAACAGTAGAACC+TGG + Chr3:94194889-94194908 MsG0380017262.01.T01:intron 50.0%
TGGTATGCCACGGTTCAGAT+TGG - Chr3:94196486-94196505 None:intergenic 50.0%
TTATCTTGGGCAGCGTGAGT+AGG - Chr3:94194333-94194352 None:intergenic 50.0%
TTGAACATCGTCCAGCGTCT+CGG - Chr3:94194388-94194407 None:intergenic 50.0%
! ATGGATTGCCAGAGTCGAGT+GGG + Chr3:94196829-94196848 MsG0380017262.01.T01:intron 50.0%
! CCCTCGGAATAATCGGTTCT+TGG - Chr3:94196342-94196361 None:intergenic 50.0%
! CGACGTTGGAAAGAGTTGGT+CGG - Chr3:94193758-94193777 None:intergenic 50.0%
! CTTTCTGGCCAAGCTCAACT+AGG - Chr3:94196891-94196910 None:intergenic 50.0%
! GAGTTTTTCTGAGCCAAGGG+AGG + Chr3:94196265-94196284 MsG0380017262.01.T01:CDS 50.0%
! GCACTGGCACTCTAGATTGA+AGG + Chr3:94195383-94195402 MsG0380017262.01.T01:intron 50.0%
! GGAATAATCGGTTCTTGGGC+CGG - Chr3:94196337-94196356 None:intergenic 50.0%
! GGTGGGTGCTGCAAGTTATT+TGG + Chr3:94194869-94194888 MsG0380017262.01.T01:intron 50.0%
!! AAGGGATTGAGGGTATCGGT+TGG - Chr3:94193833-94193852 None:intergenic 50.0%
!! AGGGATTGAGGGTATCGGTT+GGG - Chr3:94193832-94193851 None:intergenic 50.0%
!! ATCTTCAGAGGTGCTGGTAG+GGG - Chr3:94197214-94197233 None:intergenic 50.0%
!! GGTGTGTTGCTTCTCAACCT+AGG + Chr3:94194357-94194376 MsG0380017262.01.T01:CDS 50.0%
!! GTAGCACTGGCACTCTTGTT+TGG + Chr3:94195353-94195372 MsG0380017262.01.T01:intron 50.0%
!! GTGTTGCTTCTCAACCTAGG+TGG + Chr3:94194360-94194379 MsG0380017262.01.T01:CDS 50.0%
CAAGAATTGGGCACGTGTCC+CGG + Chr3:94197107-94197126 MsG0380017262.01.T01:CDS 55.0%
CTGGGTACATCTTGTGCCAG+TGG + Chr3:94195030-94195049 MsG0380017262.01.T01:intron 55.0%
TGAACATCGTCCAGCGTCTC+GGG - Chr3:94194387-94194406 None:intergenic 55.0%
TGCGGCGATGAAGGGATTGA+GGG - Chr3:94193843-94193862 None:intergenic 55.0%
! GGGCCGGATACCGAGTTTTA+AGG - Chr3:94196321-94196340 None:intergenic 55.0%
! TGGAAAGAGTTGGTCGGCGT+GGG - Chr3:94193752-94193771 None:intergenic 55.0%
! TTGGAAAGAGTTGGTCGGCG+TGG - Chr3:94193753-94193772 None:intergenic 55.0%
!! GATGGATTGCCAGAGTCGAG+TGG + Chr3:94196828-94196847 MsG0380017262.01.T01:intron 55.0%
!! GTGTTCTGGAGCAAACGCTC+AGG + Chr3:94196028-94196047 MsG0380017262.01.T01:CDS 55.0%
AAGGGGTGAGACCAAGAGCC+GGG - Chr3:94197128-94197147 None:intergenic 60.0%
ATGGACGACGACGACGACGT+TGG - Chr3:94193772-94193791 None:intergenic 60.0%
CACAAACATGCCCAACCCCC+AGG - Chr3:94194910-94194929 None:intergenic 60.0%
CTGCGGCGATGAAGGGATTG+AGG - Chr3:94193844-94193863 None:intergenic 60.0%
GAAGGGGTGAGACCAAGAGC+CGG - Chr3:94197129-94197148 None:intergenic 60.0%
!! GATGGTGGGATTGGACCCCT+CGG - Chr3:94196358-94196377 None:intergenic 60.0%
GTACAGGGCCCACTCGACTC+TGG - Chr3:94196840-94196859 None:intergenic 65.0%
GTCGAGTGGGCCCTGTACAG+TGG + Chr3:94196842-94196861 MsG0380017262.01.T01:CDS 65.0%
TCGGCGTGGGTGAGGAAGGA+AGG - Chr3:94193739-94193758 None:intergenic 65.0%
TTGGTCGGCGTGGGTGAGGA+AGG - Chr3:94193743-94193762 None:intergenic 65.0%
! AGAGTTGGTCGGCGTGGGTG+AGG - Chr3:94193747-94193766 None:intergenic 65.0%
CCAGCGTCTCGGGTCCACCT+AGG - Chr3:94194377-94194396 None:intergenic 70.0%
CCTAGGTGGACCCGAGACGC+TGG + Chr3:94194374-94194393 MsG0380017262.01.T01:CDS 70.0%
TGGGCACGTGTCCCGGCTCT+TGG + Chr3:94197114-94197133 MsG0380017262.01.T01:CDS 70.0%
Chromosome Type Strat End Strand Name
Chr3 gene 94193613 94197562 94193613 ID=MsG0380017262.01;Name=MsG0380017262.01
Chr3 mRNA 94193613 94197562 94193613 ID=MsG0380017262.01.T01;Parent=MsG0380017262.01;Name=MsG0380017262.01.T01;_AED=0.29;_eAED=0.29;_QI=165|1|1|1|0.88|0.8|10|215|474
Chr3 exon 94193613 94193722 94193613 ID=MsG0380017262.01.T01:exon:2012;Parent=MsG0380017262.01.T01
Chr3 exon 94193744 94193872 94193744 ID=MsG0380017262.01.T01:exon:2013;Parent=MsG0380017262.01.T01
Chr3 exon 94197032 94197562 94197032 ID=MsG0380017262.01.T01:exon:2021;Parent=MsG0380017262.01.T01
Chr3 five_prime_UTR 94193613 94193722 94193613 ID=MsG0380017262.01.T01:five_prime_utr;Parent=MsG0380017262.01.T01
Chr3 five_prime_UTR 94193744 94193798 94193744 ID=MsG0380017262.01.T01:five_prime_utr;Parent=MsG0380017262.01.T01
Chr3 CDS 94193799 94193872 94193799 ID=MsG0380017262.01.T01:cds;Parent=MsG0380017262.01.T01
Chr3 CDS 94194134 94194437 94194134 ID=MsG0380017262.01.T01:cds;Parent=MsG0380017262.01.T01
Chr3 CDS 94195142 94195285 94195142 ID=MsG0380017262.01.T01:cds;Parent=MsG0380017262.01.T01
Chr3 CDS 94195666 94195767 94195666 ID=MsG0380017262.01.T01:cds;Parent=MsG0380017262.01.T01
Chr3 CDS 94195946 94196049 94195946 ID=MsG0380017262.01.T01:cds;Parent=MsG0380017262.01.T01
Chr3 CDS 94196160 94196286 94196160 ID=MsG0380017262.01.T01:cds;Parent=MsG0380017262.01.T01
Chr3 CDS 94196529 94196681 94196529 ID=MsG0380017262.01.T01:cds;Parent=MsG0380017262.01.T01
Chr3 CDS 94196841 94196941 94196841 ID=MsG0380017262.01.T01:cds;Parent=MsG0380017262.01.T01
Chr3 CDS 94197032 94197347 94197032 ID=MsG0380017262.01.T01:cds;Parent=MsG0380017262.01.T01
Chr3 three_prime_UTR 94197348 94197562 94197348 ID=MsG0380017262.01.T01:three_prime_utr;Parent=MsG0380017262.01.T01
Chr3 mRNA 94193656 94197561 94193656 ID=MsG0380017262.01.T02;Parent=MsG0380017262.01;Name=MsG0380017262.01.T02;_AED=0.29;_eAED=0.29;_QI=143|1|1|1|1|1|9|214|474
Chr3 exon 94193656 94193872 94193656 ID=MsG0380017262.01.T02:exon:2022;Parent=MsG0380017262.01.T02
Chr3 exon 94197032 94197561 94197032 ID=MsG0380017262.01.T02:exon:2023;Parent=MsG0380017262.01.T02
Chr3 five_prime_UTR 94193656 94193798 94193656 ID=MsG0380017262.01.T02:five_prime_utr;Parent=MsG0380017262.01.T02
Chr3 CDS 94193799 94193872 94193799 ID=MsG0380017262.01.T02:cds;Parent=MsG0380017262.01.T02
Chr3 CDS 94194134 94194437 94194134 ID=MsG0380017262.01.T02:cds;Parent=MsG0380017262.01.T02
Chr3 CDS 94195142 94195285 94195142 ID=MsG0380017262.01.T02:cds;Parent=MsG0380017262.01.T02
Chr3 CDS 94195666 94195767 94195666 ID=MsG0380017262.01.T02:cds;Parent=MsG0380017262.01.T02
Chr3 CDS 94195946 94196049 94195946 ID=MsG0380017262.01.T02:cds;Parent=MsG0380017262.01.T02
Chr3 CDS 94196160 94196286 94196160 ID=MsG0380017262.01.T02:cds;Parent=MsG0380017262.01.T02
Chr3 CDS 94196529 94196681 94196529 ID=MsG0380017262.01.T02:cds;Parent=MsG0380017262.01.T02
Chr3 CDS 94196841 94196941 94196841 ID=MsG0380017262.01.T02:cds;Parent=MsG0380017262.01.T02
Chr3 CDS 94197032 94197347 94197032 ID=MsG0380017262.01.T02:cds;Parent=MsG0380017262.01.T02
Chr3 three_prime_UTR 94197348 94197561 94197348 ID=MsG0380017262.01.T02:three_prime_utr;Parent=MsG0380017262.01.T02
Gene Sequence

>MsG0380017262.01.T02

ATGAACGCACTCTCACATTCTTCTCTTCTTCCCAACCGATACCCTCAATCCCTTCATCGCCGCAGATTTTCACTGTCATGTTCTGATTCTGATATTCAAAATCTTACCCGTGTTACTTGCTACTCGGATTGTAACAAGTCTACATCTCAGGCATCCTTGTTTTTGTGTCCTGGCTCGACCAATACAAGAATTGGCACCAGAAACTTAGTTTCTCGCTCATTTTATTCTGCACATGCAACCACTTATAATGGCCTTACTACTGTGCAATCTCCTACTCACGCTGCCCAAGATAAAGTTGGTGTGTTGCTTCTCAACCTAGGTGGACCCGAGACGCTGGACGATGTTCAACCTTTCCTCTTTAATCTTTTCGCAGATCCTGATATCATTCGGCTCCCAAGATTGTTTCGGTTTCTCCAGCAACCATTAGCAAAACTGATATCTACGCTCCGGGCTCCTAAATCCAAAGAAGCATATGCTTCTATTGGAGGTGGCTCTCCTTTACGCAAAATTACAGATGACCAGGCACTTGCACTTAAAAGGGCTTTGGAAGCAAAGGGCCTCTCTTCAAATATCTATGTTGGGATGCGGTACTGGTACCCATTCACTGAAGAAGCAATTCAACAAATTAAGAAGGATGGAATAACAAGGCTCGTGGTGTTACCCCTTTATCCCCAGTTTTCTATATCCACTACTGGGTCAAGCATCAGTGTTCTGGAGCAAACGCTCAGGGAAGATGCTTATTTGTCTAGGCTTCCTGTTTCCATTATAAACTCTTGGTATCAAAGAGAAGGTTATATTAAGTCAATGGCTGACTTAATTGAGAAAGAACTCGAGAGTTTTTCTGAGCCAAGGGAGGCAATGATATTTTTTAGTGCCCATGGTGTTCCTGTCAGTTATGTTGAGAATGCTGGGGATCCATACCGAGATCAAATGGAGGAGTGCATCTTCTTGATCATGCAGGAATTGAAAGCTAGAGGAATTAGTAATGAGCACACTCTTGCTTATCAGAGTCGAGTGGGCCCTGTACAGTGGTTGAAACCATATACAGATGAAGTCCTAGTTGAGCTTGGCCAGAAAGGTGTAAAGAGTCTTTTAGCTGTTCCAGTGAGCTTTGTGAGTGAGCACATAGAGACTCTTGAAGAAATTGACATGGAGTACAGGGAATTGGCTCTTGAATCTGGCATCAAGAATTGGGCACGTGTCCCGGCTCTTGGTCTCACCCCTTCCTTCATCACGGATCTTGCAGATGCGGTGATAGAAGCTCTACCATCGGCAGCAGCAATAAATGCCCCTACCAGCACCTCTGAAGATATGGATAAAGACCCAGTTAAATACTTCGCCAAGATGTTTTTTGGTTCAGTTTTGGCTTTCATCTTGTTTTTGTCACCCAAAATGATAACTGCGTTCAGGAATCATGTCATTTAA

>MsG0380017262.01.T01

ATGAACGCACTCTCACATTCTTCTCTTCTTCCCAACCGATACCCTCAATCCCTTCATCGCCGCAGATTTTCACTGTCATGTTCTGATTCTGATATTCAAAATCTTACCCGTGTTACTTGCTACTCGGATTGTAACAAGTCTACATCTCAGGCATCCTTGTTTTTGTGTCCTGGCTCGACCAATACAAGAATTGGCACCAGAAACTTAGTTTCTCGCTCATTTTATTCTGCACATGCAACCACTTATAATGGCCTTACTACTGTGCAATCTCCTACTCACGCTGCCCAAGATAAAGTTGGTGTGTTGCTTCTCAACCTAGGTGGACCCGAGACGCTGGACGATGTTCAACCTTTCCTCTTTAATCTTTTCGCAGATCCTGATATCATTCGGCTCCCAAGATTGTTTCGGTTTCTCCAGCAACCATTAGCAAAACTGATATCTACGCTCCGGGCTCCTAAATCCAAAGAAGCATATGCTTCTATTGGAGGTGGCTCTCCTTTACGCAAAATTACAGATGACCAGGCACTTGCACTTAAAAGGGCTTTGGAAGCAAAGGGCCTCTCTTCAAATATCTATGTTGGGATGCGGTACTGGTACCCATTCACTGAAGAAGCAATTCAACAAATTAAGAAGGATGGAATAACAAGGCTCGTGGTGTTACCCCTTTATCCCCAGTTTTCTATATCCACTACTGGGTCAAGCATCAGTGTTCTGGAGCAAACGCTCAGGGAAGATGCTTATTTGTCTAGGCTTCCTGTTTCCATTATAAACTCTTGGTATCAAAGAGAAGGTTATATTAAGTCAATGGCTGACTTAATTGAGAAAGAACTCGAGAGTTTTTCTGAGCCAAGGGAGGCAATGATATTTTTTAGTGCCCATGGTGTTCCTGTCAGTTATGTTGAGAATGCTGGGGATCCATACCGAGATCAAATGGAGGAGTGCATCTTCTTGATCATGCAGGAATTGAAAGCTAGAGGAATTAGTAATGAGCACACTCTTGCTTATCAGAGTCGAGTGGGCCCTGTACAGTGGTTGAAACCATATACAGATGAAGTCCTAGTTGAGCTTGGCCAGAAAGGTGTAAAGAGTCTTTTAGCTGTTCCAGTGAGCTTTGTGAGTGAGCACATAGAGACTCTTGAAGAAATTGACATGGAGTACAGGGAATTGGCTCTTGAATCTGGCATCAAGAATTGGGCACGTGTCCCGGCTCTTGGTCTCACCCCTTCCTTCATCACGGATCTTGCAGATGCGGTGATAGAAGCTCTACCATCGGCAGCAGCAATAAATGCCCCTACCAGCACCTCTGAAGATATGGATAAAGACCCAGTTAAATACTTCGCCAAGATGTTTTTTGGTTCAGTTTTGGCTTTCATCTTGTTTTTGTCACCCAAAATGATAACTGCGTTCAGGAATCATGTCATTTAA
Protein sequence

>MsG0380017262.01.T02

MNALSHSSLLPNRYPQSLHRRRFSLSCSDSDIQNLTRVTCYSDCNKSTSQASLFLCPGSTNTRIGTRNLVSRSFYSAHATTYNGLTTVQSPTHAAQDKVGVLLLNLGGPETLDDVQPFLFNLFADPDIIRLPRLFRFLQQPLAKLISTLRAPKSKEAYASIGGGSPLRKITDDQALALKRALEAKGLSSNIYVGMRYWYPFTEEAIQQIKKDGITRLVVLPLYPQFSISTTGSSISVLEQTLREDAYLSRLPVSIINSWYQREGYIKSMADLIEKELESFSEPREAMIFFSAHGVPVSYVENAGDPYRDQMEECIFLIMQELKARGISNEHTLAYQSRVGPVQWLKPYTDEVLVELGQKGVKSLLAVPVSFVSEHIETLEEIDMEYRELALESGIKNWARVPALGLTPSFITDLADAVIEALPSAAAINAPTSTSEDMDKDPVKYFAKMFFGSVLAFILFLSPKMITAFRNHVI*

>MsG0380017262.01.T01

MNALSHSSLLPNRYPQSLHRRRFSLSCSDSDIQNLTRVTCYSDCNKSTSQASLFLCPGSTNTRIGTRNLVSRSFYSAHATTYNGLTTVQSPTHAAQDKVGVLLLNLGGPETLDDVQPFLFNLFADPDIIRLPRLFRFLQQPLAKLISTLRAPKSKEAYASIGGGSPLRKITDDQALALKRALEAKGLSSNIYVGMRYWYPFTEEAIQQIKKDGITRLVVLPLYPQFSISTTGSSISVLEQTLREDAYLSRLPVSIINSWYQREGYIKSMADLIEKELESFSEPREAMIFFSAHGVPVSYVENAGDPYRDQMEECIFLIMQELKARGISNEHTLAYQSRVGPVQWLKPYTDEVLVELGQKGVKSLLAVPVSFVSEHIETLEEIDMEYRELALESGIKNWARVPALGLTPSFITDLADAVIEALPSAAAINAPTSTSEDMDKDPVKYFAKMFFGSVLAFILFLSPKMITAFRNHVI*