Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280007043.01.T01 | XP_003593922.1 | 86.405 | 331 | 15 | 2 | 9 | 309 | 6 | 336 | 0 | 573 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280007043.01.T01 | Q9XG83 | 69.817 | 328 | 65 | 5 | 9 | 306 | 6 | 329 | 3.88E-158 | 447 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280007043.01.T01 | G7IPV5 | 86.405 | 331 | 15 | 2 | 9 | 309 | 6 | 336 | 0.0 | 573 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0280007031.01 | MsG0280007043.01 | 0.913881 | 3.678476e-84 | 8.889586e-80 |
| MsG0280007043.01 | MsG0280008295.01 | 0.800788 | 1.222873e-48 | 5.744533e-46 |
| MsG0280007043.01 | MsG0280010784.01 | 0.807865 | 4.101558e-50 | 2.309998e-47 |
| MsG0280007043.01 | MsG0580025328.01 | 0.820624 | 6.216755e-53 | 4.943991e-50 |
| MsG0280007043.01 | MsG0680031538.01 | 0.804400 | 2.200191e-49 | 1.133269e-46 |
| MsG0280007043.01 | MsG0880042743.01 | 0.804986 | 1.660283e-49 | 8.682294e-47 |
| MsG0280007043.01 | MsG0880043835.01 | 0.814133 | 1.799187e-51 | 1.197295e-48 |
| MsG0280007043.01 | MsG0880044346.01 | 0.809487 | 1.846757e-50 | 1.085679e-47 |
| MsG0280007043.01 | MsG0880046209.01 | 0.800080 | 1.704328e-48 | 7.864124e-46 |
| MsG0280007043.01 | MsG0880046395.01 | 0.810592 | 1.067703e-50 | 6.462447e-48 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280007043.01.T01 | MTR_2g019370 | 86.405 | 331 | 15 | 2 | 9 | 309 | 6 | 336 | 0.0 | 573 |
| MsG0280007043.01.T01 | MTR_4g096840 | 61.280 | 328 | 94 | 4 | 9 | 305 | 7 | 332 | 2.15e-142 | 405 |
| MsG0280007043.01.T01 | MTR_2g070870 | 55.140 | 321 | 106 | 5 | 15 | 305 | 12 | 324 | 1.46e-122 | 354 |
| MsG0280007043.01.T01 | MTR_8g461330 | 52.244 | 312 | 118 | 3 | 25 | 305 | 21 | 332 | 1.32e-108 | 319 |
| MsG0280007043.01.T01 | MTR_1g086550 | 45.048 | 313 | 134 | 4 | 30 | 304 | 19 | 331 | 8.40e-87 | 264 |
| MsG0280007043.01.T01 | MTR_4g123020 | 41.538 | 325 | 146 | 8 | 16 | 303 | 1 | 318 | 1.06e-75 | 235 |
| MsG0280007043.01.T01 | MTR_2g033270 | 40.584 | 308 | 139 | 7 | 31 | 304 | 19 | 316 | 6.69e-65 | 207 |
| MsG0280007043.01.T01 | MTR_2g102570 | 29.179 | 329 | 180 | 9 | 11 | 300 | 36 | 350 | 5.00e-32 | 122 |
| MsG0280007043.01.T01 | MTR_5g055680 | 27.653 | 311 | 173 | 10 | 24 | 295 | 40 | 337 | 3.94e-30 | 117 |
| MsG0280007043.01.T01 | MTR_5g055900 | 27.331 | 311 | 174 | 11 | 24 | 295 | 40 | 337 | 1.25e-28 | 113 |
| MsG0280007043.01.T01 | MTR_0009s0050 | 27.974 | 311 | 172 | 12 | 24 | 295 | 40 | 337 | 3.23e-28 | 112 |
| MsG0280007043.01.T01 | MTR_0009s0050 | 27.974 | 311 | 172 | 12 | 24 | 295 | 40 | 337 | 4.10e-28 | 112 |
| MsG0280007043.01.T01 | MTR_5g048570 | 28.939 | 311 | 167 | 12 | 24 | 295 | 40 | 335 | 4.61e-28 | 111 |
| MsG0280007043.01.T01 | MTR_0328s0030 | 26.183 | 317 | 170 | 11 | 24 | 295 | 38 | 335 | 6.61e-27 | 108 |
| MsG0280007043.01.T01 | MTR_8g064200 | 26.899 | 316 | 178 | 12 | 20 | 295 | 41 | 343 | 1.24e-26 | 107 |
| MsG0280007043.01.T01 | MTR_8g064200 | 26.899 | 316 | 178 | 12 | 20 | 295 | 46 | 348 | 1.40e-26 | 107 |
| MsG0280007043.01.T01 | MTR_4g087090 | 27.900 | 319 | 168 | 9 | 22 | 289 | 21 | 328 | 1.52e-26 | 107 |
| MsG0280007043.01.T01 | MTR_7g068650 | 27.333 | 300 | 165 | 10 | 31 | 287 | 54 | 343 | 1.71e-26 | 107 |
| MsG0280007043.01.T01 | MTR_5g048470 | 26.364 | 330 | 186 | 13 | 6 | 295 | 32 | 344 | 3.32e-26 | 106 |
| MsG0280007043.01.T01 | MTR_0009s0050 | 29.839 | 248 | 152 | 10 | 57 | 295 | 5 | 239 | 7.43e-26 | 103 |
| MsG0280007043.01.T01 | MTR_0009s0050 | 29.839 | 248 | 152 | 10 | 57 | 295 | 5 | 239 | 1.02e-25 | 103 |
| MsG0280007043.01.T01 | MTR_5g032880 | 27.044 | 318 | 179 | 9 | 14 | 291 | 18 | 322 | 6.52e-25 | 105 |
| MsG0280007043.01.T01 | MTR_5g032880 | 26.822 | 343 | 174 | 11 | 8 | 294 | 350 | 671 | 2.31e-24 | 103 |
| MsG0280007043.01.T01 | MTR_8g024120 | 26.837 | 313 | 171 | 9 | 26 | 296 | 37 | 333 | 6.92e-25 | 102 |
| MsG0280007043.01.T01 | MTR_3g096500 | 27.795 | 331 | 170 | 15 | 23 | 296 | 52 | 370 | 1.32e-24 | 102 |
| MsG0280007043.01.T01 | MTR_3g088565 | 29.932 | 294 | 160 | 13 | 30 | 286 | 2 | 286 | 1.72e-24 | 101 |
| MsG0280007043.01.T01 | MTR_4g087100 | 27.217 | 327 | 169 | 13 | 15 | 283 | 8 | 323 | 2.18e-24 | 101 |
| MsG0280007043.01.T01 | MTR_8g033380 | 28.710 | 310 | 177 | 13 | 3 | 293 | 70 | 354 | 4.28e-24 | 100 |
| MsG0280007043.01.T01 | MTR_4g015790 | 26.667 | 300 | 167 | 9 | 31 | 287 | 62 | 351 | 1.03e-23 | 100 |
| MsG0280007043.01.T01 | MTR_6g015950 | 28.428 | 299 | 165 | 12 | 31 | 292 | 39 | 325 | 1.32e-23 | 99.4 |
| MsG0280007043.01.T01 | MTR_5g082750 | 26.205 | 332 | 187 | 13 | 3 | 287 | 17 | 337 | 2.26e-23 | 99.0 |
| MsG0280007043.01.T01 | MTR_0056s0160 | 27.039 | 233 | 150 | 8 | 70 | 295 | 3 | 222 | 2.90e-23 | 96.3 |
| MsG0280007043.01.T01 | MTR_6g464620 | 25.397 | 315 | 174 | 13 | 31 | 295 | 64 | 367 | 3.32e-23 | 98.6 |
| MsG0280007043.01.T01 | MTR_5g032870 | 26.727 | 333 | 175 | 12 | 14 | 294 | 18 | 333 | 3.93e-23 | 98.2 |
| MsG0280007043.01.T01 | MTR_5g048550 | 26.688 | 311 | 176 | 13 | 24 | 295 | 40 | 337 | 3.95e-23 | 98.2 |
| MsG0280007043.01.T01 | MTR_3g070860 | 26.333 | 300 | 167 | 11 | 31 | 287 | 50 | 338 | 4.42e-23 | 98.2 |
| MsG0280007043.01.T01 | MTR_2g437380 | 29.304 | 273 | 166 | 10 | 45 | 305 | 4 | 261 | 5.45e-23 | 96.3 |
| MsG0280007043.01.T01 | MTR_4g087120 | 26.911 | 327 | 170 | 13 | 15 | 283 | 8 | 323 | 7.74e-23 | 97.4 |
| MsG0280007043.01.T01 | MTR_1g034120 | 33.708 | 178 | 102 | 5 | 112 | 283 | 158 | 325 | 1.77e-22 | 96.3 |
| MsG0280007043.01.T01 | MTR_5g048740 | 29.688 | 192 | 119 | 5 | 110 | 295 | 155 | 336 | 2.46e-22 | 95.9 |
| MsG0280007043.01.T01 | MTR_2g437380 | 29.304 | 273 | 166 | 10 | 45 | 305 | 98 | 355 | 2.76e-22 | 95.9 |
| MsG0280007043.01.T01 | MTR_8g093930 | 26.282 | 312 | 174 | 13 | 31 | 297 | 47 | 347 | 3.72e-22 | 95.5 |
| MsG0280007043.01.T01 | MTR_4g087140 | 25.705 | 319 | 169 | 12 | 22 | 283 | 17 | 324 | 7.04e-22 | 94.7 |
| MsG0280007043.01.T01 | MTR_1g102070 | 27.010 | 311 | 170 | 13 | 27 | 295 | 67 | 362 | 7.12e-22 | 95.1 |
| MsG0280007043.01.T01 | MTR_3g026150 | 28.936 | 235 | 147 | 8 | 70 | 297 | 28 | 249 | 7.26e-22 | 92.8 |
| MsG0280007043.01.T01 | MTR_3g026150 | 27.273 | 341 | 181 | 14 | 4 | 297 | 32 | 352 | 8.85e-22 | 94.4 |
| MsG0280007043.01.T01 | MTR_7g016080 | 25.926 | 297 | 166 | 10 | 31 | 292 | 41 | 318 | 1.12e-21 | 93.6 |
| MsG0280007043.01.T01 | MTR_1g033810 | 27.946 | 297 | 146 | 13 | 31 | 279 | 47 | 323 | 1.29e-21 | 94.0 |
| MsG0280007043.01.T01 | MTR_1g070080 | 25.786 | 318 | 179 | 9 | 29 | 304 | 36 | 338 | 1.41e-21 | 93.6 |
| MsG0280007043.01.T01 | MTR_4g116010 | 31.048 | 248 | 142 | 10 | 45 | 279 | 92 | 323 | 1.46e-21 | 93.6 |
| MsG0280007043.01.T01 | MTR_3g083370 | 31.111 | 180 | 109 | 5 | 113 | 286 | 111 | 281 | 3.05e-21 | 92.4 |
| MsG0280007043.01.T01 | MTR_1g034060 | 32.584 | 178 | 104 | 5 | 112 | 283 | 158 | 325 | 4.17e-21 | 92.4 |
| MsG0280007043.01.T01 | MTR_7g063730 | 26.855 | 283 | 158 | 11 | 48 | 295 | 86 | 354 | 4.79e-21 | 92.4 |
| MsG0280007043.01.T01 | MTR_1g070135 | 23.615 | 343 | 194 | 13 | 2 | 297 | 8 | 329 | 5.01e-21 | 92.0 |
| MsG0280007043.01.T01 | MTR_3g117485 | 25.630 | 238 | 153 | 9 | 54 | 279 | 32 | 257 | 5.81e-21 | 90.9 |
| MsG0280007043.01.T01 | MTR_5g055800 | 26.045 | 311 | 177 | 12 | 24 | 295 | 40 | 336 | 6.56e-21 | 92.0 |
| MsG0280007043.01.T01 | MTR_0009s0050 | 34.507 | 142 | 79 | 5 | 160 | 295 | 24 | 157 | 7.97e-21 | 88.2 |
| MsG0280007043.01.T01 | MTR_8g074050 | 28.111 | 217 | 137 | 7 | 70 | 279 | 125 | 329 | 9.20e-21 | 91.7 |
| MsG0280007043.01.T01 | MTR_3g117485 | 25.630 | 238 | 153 | 9 | 54 | 279 | 104 | 329 | 1.69e-20 | 90.9 |
| MsG0280007043.01.T01 | MTR_0009s0480 | 24.437 | 311 | 183 | 10 | 24 | 295 | 39 | 336 | 1.96e-20 | 90.5 |
| MsG0280007043.01.T01 | MTR_5g085330 | 31.351 | 185 | 110 | 5 | 113 | 288 | 112 | 288 | 2.46e-20 | 89.7 |
| MsG0280007043.01.T01 | MTR_5g055690 | 24.679 | 312 | 182 | 11 | 24 | 295 | 40 | 338 | 2.79e-20 | 90.1 |
| MsG0280007043.01.T01 | MTR_2g072890 | 26.144 | 306 | 172 | 12 | 31 | 295 | 52 | 344 | 3.47e-20 | 90.1 |
| MsG0280007043.01.T01 | MTR_4g087110 | 24.225 | 355 | 190 | 15 | 15 | 301 | 8 | 351 | 6.05e-20 | 89.4 |
| MsG0280007043.01.T01 | MTR_5g022020 | 26.537 | 309 | 169 | 14 | 29 | 293 | 37 | 331 | 7.02e-20 | 89.0 |
| MsG0280007043.01.T01 | MTR_8g093980 | 30.000 | 200 | 125 | 6 | 103 | 297 | 169 | 358 | 1.06e-19 | 89.0 |
| MsG0280007043.01.T01 | MTR_5g055820 | 25.938 | 320 | 183 | 13 | 17 | 297 | 35 | 339 | 1.27e-19 | 88.2 |
| MsG0280007043.01.T01 | MTR_4g074130 | 25.974 | 308 | 169 | 12 | 18 | 290 | 35 | 318 | 1.98e-19 | 87.8 |
| MsG0280007043.01.T01 | MTR_1g070120 | 22.866 | 328 | 184 | 10 | 14 | 292 | 18 | 325 | 3.48e-19 | 87.0 |
| MsG0280007043.01.T01 | MTR_3g117420 | 27.004 | 237 | 150 | 10 | 54 | 279 | 105 | 329 | 4.15e-19 | 86.7 |
| MsG0280007043.01.T01 | MTR_1g081840 | 29.592 | 196 | 122 | 5 | 107 | 297 | 171 | 355 | 5.64e-19 | 86.7 |
| MsG0280007043.01.T01 | MTR_3g092890 | 23.585 | 318 | 185 | 11 | 19 | 295 | 26 | 326 | 6.07e-19 | 86.3 |
| MsG0280007043.01.T01 | MTR_1g070085 | 30.000 | 180 | 108 | 5 | 113 | 286 | 74 | 241 | 7.45e-19 | 84.7 |
| MsG0280007043.01.T01 | MTR_8g075830 | 27.645 | 293 | 162 | 13 | 8 | 266 | 28 | 304 | 9.13e-19 | 85.9 |
| MsG0280007043.01.T01 | MTR_8g075890 | 27.645 | 293 | 162 | 13 | 8 | 266 | 28 | 304 | 9.58e-19 | 85.9 |
| MsG0280007043.01.T01 | MTR_7g016090 | 25.460 | 326 | 182 | 13 | 19 | 300 | 29 | 337 | 1.10e-18 | 85.5 |
| MsG0280007043.01.T01 | MTR_2g068840 | 28.947 | 190 | 104 | 5 | 118 | 291 | 172 | 346 | 1.18e-18 | 85.5 |
| MsG0280007043.01.T01 | MTR_7g016090 | 25.460 | 326 | 182 | 13 | 19 | 300 | 27 | 335 | 1.19e-18 | 85.5 |
| MsG0280007043.01.T01 | MTR_1g070100 | 29.255 | 188 | 115 | 5 | 104 | 285 | 61 | 236 | 1.42e-18 | 84.0 |
| MsG0280007043.01.T01 | MTR_5g011250 | 28.444 | 225 | 142 | 8 | 70 | 286 | 124 | 337 | 1.62e-18 | 85.1 |
| MsG0280007043.01.T01 | MTR_1g070085 | 30.000 | 180 | 108 | 5 | 113 | 286 | 152 | 319 | 1.73e-18 | 85.1 |
| MsG0280007043.01.T01 | MTR_1g070085 | 30.000 | 180 | 108 | 5 | 113 | 286 | 152 | 319 | 1.73e-18 | 85.1 |
| MsG0280007043.01.T01 | MTR_8g074070 | 26.809 | 235 | 151 | 8 | 45 | 270 | 98 | 320 | 1.89e-18 | 85.1 |
| MsG0280007043.01.T01 | MTR_3g063180 | 26.556 | 241 | 152 | 8 | 63 | 291 | 110 | 337 | 2.41e-18 | 84.7 |
| MsG0280007043.01.T01 | MTR_2g025120 | 27.442 | 215 | 137 | 6 | 81 | 288 | 83 | 285 | 2.68e-18 | 84.0 |
| MsG0280007043.01.T01 | MTR_3g088745 | 26.367 | 311 | 170 | 10 | 32 | 293 | 37 | 337 | 2.82e-18 | 84.7 |
| MsG0280007043.01.T01 | MTR_5g059130 | 25.159 | 314 | 182 | 12 | 15 | 286 | 24 | 326 | 3.72e-18 | 84.0 |
| MsG0280007043.01.T01 | MTR_3g072810 | 29.008 | 262 | 161 | 9 | 45 | 292 | 77 | 327 | 3.75e-18 | 84.0 |
| MsG0280007043.01.T01 | MTR_7g062580 | 24.407 | 295 | 171 | 11 | 31 | 286 | 55 | 336 | 3.80e-18 | 84.3 |
| MsG0280007043.01.T01 | MTR_5g048850 | 23.659 | 317 | 178 | 12 | 24 | 295 | 40 | 337 | 7.93e-18 | 83.2 |
| MsG0280007043.01.T01 | MTR_2g069020 | 25.538 | 325 | 178 | 13 | 6 | 286 | 47 | 351 | 1.60e-17 | 82.4 |
| MsG0280007043.01.T01 | MTR_1g093120 | 27.914 | 326 | 157 | 14 | 31 | 300 | 67 | 370 | 1.73e-17 | 82.4 |
| MsG0280007043.01.T01 | MTR_5g059140 | 24.333 | 300 | 172 | 10 | 15 | 270 | 22 | 310 | 1.75e-17 | 82.0 |
| MsG0280007043.01.T01 | MTR_2g069020 | 25.538 | 325 | 178 | 13 | 6 | 286 | 47 | 351 | 1.98e-17 | 82.4 |
| MsG0280007043.01.T01 | MTR_3g091350 | 25.240 | 313 | 173 | 11 | 31 | 299 | 59 | 354 | 2.04e-17 | 82.0 |
| MsG0280007043.01.T01 | MTR_7g451860 | 25.574 | 305 | 157 | 12 | 31 | 290 | 41 | 320 | 3.85e-17 | 80.9 |
| MsG0280007043.01.T01 | MTR_7g047670 | 25.574 | 305 | 157 | 12 | 31 | 290 | 41 | 320 | 3.85e-17 | 80.9 |
| MsG0280007043.01.T01 | MTR_1g093140 | 26.625 | 323 | 167 | 12 | 31 | 300 | 73 | 378 | 4.16e-17 | 81.3 |
| MsG0280007043.01.T01 | MTR_5g065010 | 27.660 | 188 | 121 | 5 | 115 | 296 | 154 | 332 | 4.48e-17 | 80.9 |
| MsG0280007043.01.T01 | MTR_4g117880 | 25.697 | 323 | 162 | 15 | 31 | 301 | 60 | 356 | 5.46e-17 | 80.9 |
| MsG0280007043.01.T01 | MTR_3g072820 | 23.810 | 315 | 185 | 12 | 15 | 286 | 22 | 324 | 6.77e-17 | 80.1 |
| MsG0280007043.01.T01 | MTR_2g083000 | 27.225 | 191 | 109 | 6 | 107 | 288 | 138 | 307 | 1.12e-16 | 79.7 |
| MsG0280007043.01.T01 | MTR_1g034140 | 25.497 | 302 | 167 | 11 | 28 | 282 | 24 | 314 | 1.49e-16 | 79.3 |
| MsG0280007043.01.T01 | MTR_3g045230 | 33.588 | 131 | 74 | 3 | 162 | 286 | 211 | 334 | 1.54e-16 | 79.3 |
| MsG0280007043.01.T01 | MTR_3g043900 | 34.351 | 131 | 73 | 3 | 162 | 286 | 210 | 333 | 2.07e-16 | 79.0 |
| MsG0280007043.01.T01 | MTR_4g132770 | 32.432 | 148 | 84 | 5 | 149 | 288 | 17 | 156 | 2.82e-16 | 75.5 |
| MsG0280007043.01.T01 | MTR_2g069210 | 26.019 | 319 | 173 | 14 | 24 | 297 | 57 | 357 | 4.16e-16 | 78.2 |
| MsG0280007043.01.T01 | MTR_0009s0400 | 31.206 | 141 | 83 | 5 | 161 | 295 | 1 | 133 | 7.37e-16 | 73.9 |
| MsG0280007043.01.T01 | MTR_3g040410 | 26.056 | 284 | 156 | 11 | 40 | 288 | 25 | 289 | 9.89e-16 | 76.6 |
| MsG0280007043.01.T01 | MTR_0032s0040 | 28.571 | 196 | 112 | 7 | 113 | 295 | 182 | 362 | 1.45e-15 | 76.6 |
| MsG0280007043.01.T01 | MTR_7g081710 | 24.169 | 331 | 192 | 10 | 1 | 286 | 15 | 331 | 1.60e-15 | 76.6 |
| MsG0280007043.01.T01 | MTR_2g068950 | 25.862 | 348 | 185 | 16 | 7 | 304 | 44 | 368 | 2.55e-15 | 75.9 |
| MsG0280007043.01.T01 | MTR_1g027290 | 28.191 | 188 | 121 | 4 | 108 | 289 | 142 | 321 | 3.74e-15 | 75.5 |
| MsG0280007043.01.T01 | MTR_7g062570 | 22.741 | 321 | 196 | 11 | 5 | 286 | 29 | 336 | 4.18e-15 | 75.5 |
| MsG0280007043.01.T01 | MTR_2g072910 | 23.759 | 282 | 168 | 10 | 48 | 295 | 75 | 343 | 4.77e-15 | 75.1 |
| MsG0280007043.01.T01 | MTR_3g091360 | 24.375 | 320 | 181 | 10 | 24 | 299 | 45 | 347 | 5.11e-15 | 75.1 |
| MsG0280007043.01.T01 | MTR_8g041620 | 30.732 | 205 | 112 | 9 | 113 | 300 | 183 | 374 | 6.78e-15 | 74.7 |
| MsG0280007043.01.T01 | MTR_2g068960 | 25.000 | 348 | 188 | 16 | 7 | 304 | 44 | 368 | 1.16e-14 | 73.9 |
| MsG0280007043.01.T01 | MTR_4g093840 | 23.226 | 310 | 177 | 10 | 31 | 295 | 62 | 355 | 1.45e-14 | 73.9 |
| MsG0280007043.01.T01 | MTR_7g062560 | 26.744 | 258 | 155 | 11 | 48 | 295 | 109 | 342 | 1.68e-14 | 73.6 |
| MsG0280007043.01.T01 | MTR_4g087130 | 31.414 | 191 | 115 | 5 | 111 | 295 | 154 | 334 | 2.28e-14 | 73.2 |
| MsG0280007043.01.T01 | MTR_2g069060 | 24.290 | 317 | 180 | 10 | 31 | 304 | 49 | 348 | 4.83e-14 | 72.0 |
| MsG0280007043.01.T01 | MTR_8g028435 | 25.249 | 301 | 164 | 12 | 31 | 286 | 60 | 344 | 5.60e-14 | 72.0 |
| MsG0280007043.01.T01 | MTR_1g043770 | 25.510 | 294 | 158 | 13 | 31 | 280 | 53 | 329 | 9.21e-14 | 71.2 |
| MsG0280007043.01.T01 | MTR_2g069190 | 26.471 | 306 | 167 | 13 | 24 | 286 | 61 | 351 | 1.48e-13 | 70.9 |
| MsG0280007043.01.T01 | MTR_7g056353 | 33.557 | 149 | 81 | 5 | 112 | 254 | 153 | 289 | 2.27e-13 | 70.9 |
| MsG0280007043.01.T01 | MTR_6g092620 | 27.059 | 170 | 107 | 5 | 110 | 270 | 106 | 267 | 4.37e-13 | 68.9 |
| MsG0280007043.01.T01 | MTR_8g041600 | 31.844 | 179 | 98 | 8 | 113 | 280 | 183 | 348 | 8.60e-13 | 68.6 |
| MsG0280007043.01.T01 | MTR_2g069300 | 25.079 | 315 | 168 | 15 | 31 | 297 | 54 | 348 | 1.02e-12 | 68.2 |
| MsG0280007043.01.T01 | MTR_1g093110 | 26.730 | 318 | 173 | 14 | 31 | 303 | 70 | 372 | 1.16e-12 | 68.2 |
| MsG0280007043.01.T01 | MTR_8g009160 | 25.581 | 301 | 163 | 13 | 31 | 286 | 60 | 344 | 1.36e-12 | 67.8 |
| MsG0280007043.01.T01 | MTR_8g030880 | 23.734 | 316 | 181 | 15 | 31 | 305 | 10 | 306 | 1.45e-12 | 67.4 |
| MsG0280007043.01.T01 | MTR_8g009080 | 26.102 | 295 | 168 | 13 | 31 | 286 | 94 | 377 | 2.33e-12 | 67.4 |
| MsG0280007043.01.T01 | MTR_2g069090 | 27.795 | 331 | 166 | 19 | 24 | 300 | 61 | 372 | 2.99e-12 | 67.0 |
| MsG0280007043.01.T01 | MTR_8g063070 | 23.871 | 310 | 171 | 12 | 24 | 286 | 62 | 353 | 4.26e-12 | 66.6 |
| MsG0280007043.01.T01 | MTR_1g032140 | 29.697 | 165 | 88 | 6 | 138 | 295 | 211 | 354 | 4.29e-12 | 66.6 |
| MsG0280007043.01.T01 | MTR_7g102820 | 23.368 | 291 | 159 | 12 | 31 | 270 | 67 | 344 | 5.87e-12 | 66.2 |
| MsG0280007043.01.T01 | MTR_1g070110 | 24.257 | 202 | 107 | 4 | 104 | 300 | 68 | 228 | 7.44e-12 | 64.7 |
| MsG0280007043.01.T01 | MTR_1g032250 | 30.120 | 166 | 86 | 7 | 138 | 295 | 218 | 361 | 1.81e-11 | 64.7 |
| MsG0280007043.01.T01 | MTR_1g043810 | 24.832 | 298 | 156 | 12 | 31 | 280 | 54 | 331 | 5.41e-11 | 63.2 |
| MsG0280007043.01.T01 | MTR_1g032220 | 29.310 | 174 | 93 | 7 | 138 | 303 | 218 | 369 | 5.60e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280007043.01.T01 | AT1G30040 | 54.769 | 325 | 112 | 4 | 13 | 306 | 12 | 332 | 2.78e-124 | 359 |
| MsG0280007043.01.T01 | AT2G34555 | 50.915 | 328 | 123 | 4 | 8 | 305 | 7 | 326 | 1.03e-110 | 325 |
| MsG0280007043.01.T01 | AT1G78440 | 51.475 | 305 | 117 | 3 | 31 | 305 | 18 | 321 | 3.25e-107 | 315 |
| MsG0280007043.01.T01 | AT1G30040 | 51.695 | 236 | 84 | 3 | 13 | 222 | 12 | 243 | 4.93e-81 | 246 |
| MsG0280007043.01.T01 | AT1G02400 | 41.883 | 308 | 141 | 5 | 31 | 304 | 24 | 327 | 7.42e-76 | 235 |
| MsG0280007043.01.T01 | AT1G47990 | 40.184 | 326 | 146 | 10 | 17 | 303 | 1 | 316 | 1.69e-65 | 209 |
| MsG0280007043.01.T01 | AT1G02400 | 40.183 | 219 | 99 | 3 | 32 | 222 | 25 | 239 | 1.33e-49 | 166 |
| MsG0280007043.01.T01 | AT1G15550 | 29.755 | 326 | 178 | 10 | 13 | 299 | 40 | 353 | 2.64e-33 | 125 |
| MsG0280007043.01.T01 | AT5G08640 | 29.524 | 315 | 169 | 10 | 14 | 286 | 22 | 325 | 1.16e-30 | 118 |
| MsG0280007043.01.T01 | AT5G08640 | 29.524 | 315 | 169 | 10 | 14 | 286 | 22 | 325 | 1.16e-30 | 118 |
| MsG0280007043.01.T01 | AT2G38240 | 27.703 | 296 | 164 | 10 | 31 | 287 | 48 | 332 | 6.52e-28 | 111 |
| MsG0280007043.01.T01 | AT1G80330 | 28.333 | 300 | 166 | 9 | 31 | 291 | 49 | 338 | 1.21e-27 | 110 |
| MsG0280007043.01.T01 | AT3G55970 | 27.508 | 309 | 169 | 10 | 23 | 288 | 47 | 343 | 2.89e-27 | 109 |
| MsG0280007043.01.T01 | AT5G51810 | 27.356 | 329 | 178 | 14 | 13 | 293 | 44 | 359 | 3.09e-25 | 104 |
| MsG0280007043.01.T01 | AT5G07200 | 26.629 | 353 | 176 | 16 | 4 | 295 | 34 | 364 | 8.01e-25 | 103 |
| MsG0280007043.01.T01 | AT1G80340 | 26.774 | 310 | 173 | 9 | 31 | 299 | 50 | 346 | 1.79e-24 | 101 |
| MsG0280007043.01.T01 | AT4G25420 | 26.765 | 340 | 183 | 14 | 9 | 295 | 37 | 363 | 2.66e-24 | 101 |
| MsG0280007043.01.T01 | AT3G11180 | 25.714 | 315 | 176 | 10 | 20 | 287 | 76 | 379 | 5.40e-24 | 101 |
| MsG0280007043.01.T01 | AT3G11180 | 25.714 | 315 | 176 | 10 | 20 | 287 | 76 | 379 | 6.45e-24 | 100 |
| MsG0280007043.01.T01 | AT5G63590 | 26.846 | 298 | 164 | 11 | 31 | 287 | 14 | 298 | 6.47e-24 | 99.8 |
| MsG0280007043.01.T01 | AT1G44090 | 28.889 | 225 | 139 | 7 | 73 | 288 | 144 | 356 | 1.18e-23 | 100 |
| MsG0280007043.01.T01 | AT4G21690 | 24.923 | 325 | 184 | 13 | 22 | 299 | 37 | 348 | 4.90e-23 | 97.8 |
| MsG0280007043.01.T01 | AT4G10500 | 26.045 | 311 | 171 | 12 | 29 | 296 | 42 | 336 | 5.10e-23 | 97.8 |
| MsG0280007043.01.T01 | AT5G05600 | 24.691 | 324 | 182 | 12 | 13 | 287 | 40 | 350 | 7.02e-23 | 97.8 |
| MsG0280007043.01.T01 | AT1G78550 | 25.796 | 314 | 175 | 12 | 25 | 295 | 47 | 345 | 1.32e-22 | 96.7 |
| MsG0280007043.01.T01 | AT5G24530 | 26.688 | 311 | 169 | 12 | 28 | 295 | 35 | 329 | 3.06e-22 | 95.5 |
| MsG0280007043.01.T01 | AT1G78550 | 27.897 | 233 | 148 | 8 | 70 | 295 | 48 | 267 | 9.63e-22 | 93.2 |
| MsG0280007043.01.T01 | AT1G60980 | 25.797 | 345 | 188 | 15 | 5 | 295 | 30 | 360 | 2.05e-21 | 93.6 |
| MsG0280007043.01.T01 | AT4G16330 | 28.571 | 231 | 140 | 8 | 70 | 292 | 31 | 244 | 3.44e-21 | 91.3 |
| MsG0280007043.01.T01 | AT4G16330 | 26.910 | 301 | 164 | 11 | 31 | 292 | 67 | 350 | 3.77e-21 | 92.8 |
| MsG0280007043.01.T01 | AT3G19000 | 27.660 | 329 | 167 | 13 | 15 | 283 | 8 | 325 | 5.49e-21 | 92.0 |
| MsG0280007043.01.T01 | AT3G19010 | 27.632 | 304 | 158 | 12 | 31 | 283 | 28 | 320 | 6.34e-21 | 92.0 |
| MsG0280007043.01.T01 | AT3G19010 | 27.632 | 304 | 158 | 12 | 31 | 283 | 28 | 320 | 6.34e-21 | 92.0 |
| MsG0280007043.01.T01 | AT3G13610 | 30.890 | 191 | 105 | 5 | 113 | 291 | 171 | 346 | 7.42e-21 | 92.0 |
| MsG0280007043.01.T01 | AT4G25310 | 26.165 | 279 | 163 | 10 | 48 | 295 | 76 | 342 | 1.92e-20 | 90.5 |
| MsG0280007043.01.T01 | AT3G21420 | 27.362 | 307 | 148 | 13 | 17 | 270 | 41 | 325 | 5.22e-20 | 89.7 |
| MsG0280007043.01.T01 | AT1G17020 | 24.756 | 307 | 177 | 11 | 31 | 295 | 53 | 347 | 1.25e-19 | 88.6 |
| MsG0280007043.01.T01 | AT1G77330 | 25.658 | 304 | 177 | 11 | 30 | 295 | 2 | 294 | 1.50e-19 | 87.4 |
| MsG0280007043.01.T01 | AT2G36690 | 26.367 | 311 | 171 | 10 | 19 | 286 | 51 | 346 | 1.65e-19 | 88.2 |
| MsG0280007043.01.T01 | AT2G36690 | 26.367 | 311 | 171 | 10 | 19 | 286 | 51 | 346 | 1.65e-19 | 88.2 |
| MsG0280007043.01.T01 | AT5G63600 | 25.818 | 275 | 153 | 10 | 31 | 269 | 33 | 292 | 3.09e-19 | 87.0 |
| MsG0280007043.01.T01 | AT4G10490 | 25.000 | 264 | 165 | 9 | 45 | 293 | 87 | 332 | 3.87e-19 | 87.0 |
| MsG0280007043.01.T01 | AT5G63600 | 25.725 | 276 | 153 | 10 | 31 | 269 | 33 | 293 | 4.12e-19 | 86.7 |
| MsG0280007043.01.T01 | AT1G62380 | 26.871 | 294 | 164 | 12 | 31 | 288 | 7 | 285 | 4.54e-19 | 86.3 |
| MsG0280007043.01.T01 | AT3G12900 | 25.926 | 216 | 127 | 7 | 82 | 286 | 143 | 336 | 4.65e-19 | 86.7 |
| MsG0280007043.01.T01 | AT1G05010 | 31.390 | 223 | 126 | 9 | 55 | 270 | 65 | 267 | 4.66e-19 | 86.3 |
| MsG0280007043.01.T01 | AT3G51240 | 26.421 | 299 | 170 | 13 | 28 | 290 | 43 | 327 | 2.11e-18 | 85.1 |
| MsG0280007043.01.T01 | AT4G22880 | 28.346 | 254 | 153 | 11 | 29 | 270 | 85 | 321 | 3.24e-18 | 84.3 |
| MsG0280007043.01.T01 | AT4G22880 | 28.346 | 254 | 153 | 11 | 29 | 270 | 85 | 321 | 3.24e-18 | 84.3 |
| MsG0280007043.01.T01 | AT4G22880 | 28.346 | 254 | 153 | 11 | 29 | 270 | 85 | 321 | 3.24e-18 | 84.3 |
| MsG0280007043.01.T01 | AT3G51240 | 27.907 | 215 | 133 | 9 | 84 | 290 | 43 | 243 | 3.31e-18 | 83.2 |
| MsG0280007043.01.T01 | AT1G55290 | 25.000 | 312 | 156 | 11 | 31 | 291 | 62 | 346 | 5.43e-18 | 84.0 |
| MsG0280007043.01.T01 | AT4G25300 | 24.759 | 311 | 179 | 12 | 27 | 295 | 48 | 345 | 1.88e-17 | 82.0 |
| MsG0280007043.01.T01 | AT2G44800 | 25.602 | 332 | 187 | 10 | 1 | 286 | 17 | 334 | 2.73e-17 | 81.6 |
| MsG0280007043.01.T01 | AT1G49390 | 27.530 | 247 | 158 | 9 | 45 | 282 | 13 | 247 | 5.55e-17 | 79.7 |
| MsG0280007043.01.T01 | AT1G12010 | 30.769 | 182 | 110 | 5 | 113 | 288 | 114 | 285 | 6.27e-17 | 80.1 |
| MsG0280007043.01.T01 | AT3G55970 | 27.311 | 238 | 123 | 9 | 23 | 222 | 47 | 272 | 1.37e-16 | 79.0 |
| MsG0280007043.01.T01 | AT1G49390 | 27.530 | 247 | 158 | 9 | 45 | 282 | 92 | 326 | 2.50e-16 | 79.0 |
| MsG0280007043.01.T01 | AT1G17010 | 23.718 | 312 | 181 | 13 | 27 | 295 | 50 | 347 | 2.83e-16 | 79.0 |
| MsG0280007043.01.T01 | AT2G19590 | 25.090 | 279 | 153 | 10 | 31 | 270 | 11 | 272 | 3.75e-16 | 77.8 |
| MsG0280007043.01.T01 | AT3G60290 | 26.733 | 303 | 166 | 13 | 25 | 286 | 47 | 334 | 5.07e-16 | 78.2 |
| MsG0280007043.01.T01 | AT4G25300 | 27.895 | 190 | 121 | 6 | 112 | 295 | 72 | 251 | 8.32e-16 | 76.3 |
| MsG0280007043.01.T01 | AT5G20400 | 27.160 | 243 | 158 | 8 | 45 | 279 | 92 | 323 | 1.04e-15 | 77.0 |
| MsG0280007043.01.T01 | AT3G19010 | 27.609 | 297 | 166 | 13 | 31 | 299 | 28 | 303 | 2.78e-15 | 75.5 |
| MsG0280007043.01.T01 | AT2G19590 | 27.094 | 203 | 125 | 7 | 77 | 270 | 69 | 257 | 6.90e-15 | 73.9 |
| MsG0280007043.01.T01 | AT5G54000 | 28.899 | 218 | 134 | 9 | 70 | 279 | 40 | 244 | 7.02e-15 | 73.6 |
| MsG0280007043.01.T01 | AT2G30830 | 27.744 | 328 | 176 | 15 | 5 | 288 | 30 | 340 | 9.96e-15 | 74.3 |
| MsG0280007043.01.T01 | AT5G20550 | 26.531 | 245 | 158 | 8 | 45 | 279 | 92 | 324 | 1.26e-14 | 73.9 |
| MsG0280007043.01.T01 | AT5G43450 | 23.607 | 305 | 175 | 9 | 31 | 293 | 61 | 349 | 1.68e-14 | 73.6 |
| MsG0280007043.01.T01 | AT4G25420 | 27.413 | 259 | 130 | 12 | 9 | 222 | 37 | 282 | 1.72e-14 | 73.2 |
| MsG0280007043.01.T01 | AT5G54000 | 28.899 | 218 | 134 | 9 | 70 | 279 | 120 | 324 | 2.27e-14 | 73.2 |
| MsG0280007043.01.T01 | AT1G04380 | 28.502 | 207 | 113 | 7 | 113 | 300 | 155 | 345 | 1.71e-13 | 70.5 |
| MsG0280007043.01.T01 | AT1G06620 | 29.474 | 190 | 110 | 9 | 118 | 297 | 180 | 355 | 1.01e-12 | 68.6 |
| MsG0280007043.01.T01 | AT2G30840 | 30.303 | 198 | 111 | 9 | 118 | 300 | 177 | 362 | 6.02e-12 | 66.2 |
| MsG0280007043.01.T01 | AT5G63595 | 24.315 | 292 | 143 | 12 | 22 | 268 | 9 | 267 | 1.28e-11 | 64.3 |
| MsG0280007043.01.T01 | AT5G05600 | 23.228 | 254 | 138 | 11 | 13 | 222 | 40 | 280 | 1.35e-11 | 64.3 |
| MsG0280007043.01.T01 | AT1G52820 | 31.356 | 118 | 74 | 3 | 181 | 292 | 185 | 301 | 2.11e-11 | 64.3 |
| MsG0280007043.01.T01 | AT3G61400 | 26.064 | 188 | 116 | 7 | 118 | 294 | 183 | 358 | 3.09e-11 | 63.9 |
Find 74 sgRNAs with CRISPR-Local
Find 201 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTGAAGGCTTGTAAGGAATT+TGG | 0.190043 | 2:-9826803 | MsG0280007043.01.T01:CDS |
| GAAGGAATTTGCTTGGGTTT+GGG | 0.238321 | 2:-9825799 | MsG0280007043.01.T01:CDS |
| CTGTCTAGTGTTGGAATTAA+TGG | 0.285143 | 2:-9825948 | MsG0280007043.01.T01:CDS |
| GCTGGTCCTCCTGATCCTTT+TGG | 0.285305 | 2:-9826678 | MsG0280007043.01.T01:CDS |
| GGAAGGAATTTGCTTGGGTT+TGG | 0.286862 | 2:-9825800 | MsG0280007043.01.T01:CDS |
| CTATAAGAGTCTTTGCTTCC+GGG | 0.305111 | 2:+9826825 | None:intergenic |
| AAGTGTAAAGCATAGGGTTT+TGG | 0.313870 | 2:-9825050 | MsG0280007043.01.T01:CDS |
| CCATTCAACAAAGTTGTTGA+TGG | 0.337243 | 2:+9826872 | None:intergenic |
| GTGAAAATCGACAAAATCTA+AGG | 0.347346 | 2:-9826548 | MsG0280007043.01.T01:intron |
| AATGCTGCTTGTTGCACCTC+AGG | 0.352397 | 2:+9825827 | None:intergenic |
| GGAATTAATGGCTGATGGTT+TGG | 0.355501 | 2:-9825936 | MsG0280007043.01.T01:CDS |
| TTCCATCAGTGAGACAGATT+TGG | 0.358775 | 2:+9825720 | None:intergenic |
| GAATTAATGGCTGATGGTTT+GGG | 0.368504 | 2:-9825935 | MsG0280007043.01.T01:CDS |
| ACTATAAGAGTCTTTGCTTC+CGG | 0.371721 | 2:+9826824 | None:intergenic |
| ATTATATGTGTCTGTCTAAC+CGG | 0.399149 | 2:-9827611 | None:intergenic |
| TCTGTCTAACCGGTGTCCTC+AGG | 0.399329 | 2:-9827601 | MsG0280007043.01.T01:CDS |
| CCATCAACAACTTTGTTGAA+TGG | 0.414722 | 2:-9826872 | MsG0280007043.01.T01:CDS |
| GACTTGTTAGAGATAACATC+AGG | 0.415017 | 2:+9826585 | None:intergenic |
| AGTAAGAGAATTGGTTCAAA+TGG | 0.422764 | 2:-9826648 | MsG0280007043.01.T01:CDS |
| TCTTATAGTGAAGGCTTGTA+AGG | 0.425136 | 2:-9826810 | MsG0280007043.01.T01:CDS |
| TTCAAATGGTGATGTTGGTT+GGG | 0.425962 | 2:-9826634 | MsG0280007043.01.T01:CDS |
| GGTTATGGAAGTAAGAGAAT+TGG | 0.429063 | 2:-9826657 | MsG0280007043.01.T01:CDS |
| AGAAAGCAATGTACAATTCA+AGG | 0.429933 | 2:-9824892 | MsG0280007043.01.T01:CDS |
| TCTGTCTCACTGATGGAACT+TGG | 0.437034 | 2:-9825715 | MsG0280007043.01.T01:CDS |
| ACTTGCTTAAACACATTCCT+TGG | 0.452376 | 2:+9825906 | None:intergenic |
| AGGCTGGCTGATTATAGACT+TGG | 0.452611 | 2:-9824872 | MsG0280007043.01.T01:CDS |
| GTTCAAATGGTGATGTTGGT+TGG | 0.453207 | 2:-9826635 | MsG0280007043.01.T01:CDS |
| CCTCAGGGCACGGTGGGTAA+TGG | 0.461056 | 2:+9825843 | None:intergenic |
| CTCTTACTTCCATAACCAAA+AGG | 0.467266 | 2:+9826663 | None:intergenic |
| AAGGAATTTGCTTGGGTTTG+GGG | 0.471960 | 2:-9825798 | MsG0280007043.01.T01:CDS |
| TTTAACATTAAAGATGGTAA+AGG | 0.476105 | 2:+9824959 | None:intergenic |
| TTGAGATCTAATAGCACATC+AGG | 0.476870 | 2:-9825746 | MsG0280007043.01.T01:CDS |
| TCAAGACAGAAATGACTTGT+GGG | 0.478331 | 2:+9825765 | None:intergenic |
| TGAATGGAAGGAATTTGCTT+GGG | 0.478641 | 2:-9825805 | MsG0280007043.01.T01:CDS |
| CTTCCATAACCAAAAGGATC+AGG | 0.481337 | 2:+9826669 | None:intergenic |
| ATTGGTTCAAATGGTGATGT+TGG | 0.487540 | 2:-9826639 | MsG0280007043.01.T01:CDS |
| AAGTAAGAAATTATTAATGT+TGG | 0.490220 | 2:+9826910 | None:intergenic |
| GTTTAAAAGTGTAAAGCATA+GGG | 0.491250 | 2:-9825056 | MsG0280007043.01.T01:CDS |
| TTGAATGGAAGGAATTTGCT+TGG | 0.495411 | 2:-9825806 | MsG0280007043.01.T01:CDS |
| TTGATGCAGGTATTGACTAA+TGG | 0.496751 | 2:-9825082 | MsG0280007043.01.T01:intron |
| ATGCTGCTTGTTGCACCTCA+GGG | 0.501968 | 2:+9825828 | None:intergenic |
| GCTTGTTGCACCTCAGGGCA+CGG | 0.503859 | 2:+9825833 | None:intergenic |
| TGTCGTCGACCTTGCAGACC+CGG | 0.509378 | 2:-9826843 | MsG0280007043.01.T01:CDS |
| GTGCAACAAGCAGCATTGAA+TGG | 0.509603 | 2:-9825821 | MsG0280007043.01.T01:CDS |
| GGTTTAAAAGTGTAAAGCAT+AGG | 0.510882 | 2:-9825057 | MsG0280007043.01.T01:CDS |
| CTGTCTCACTGATGGAACTT+GGG | 0.516008 | 2:-9825714 | MsG0280007043.01.T01:CDS |
| CATCAGGGTTAGTATTAAGA+AGG | 0.519509 | 2:+9826601 | None:intergenic |
| CTCCAAATCTGTCTCACTGA+TGG | 0.526180 | 2:-9825722 | MsG0280007043.01.T01:CDS |
| AACAAGCAGCATTGAATGGA+AGG | 0.537153 | 2:-9825817 | MsG0280007043.01.T01:CDS |
| GGCTGGCTGATTATAGACTT+GGG | 0.538279 | 2:-9824871 | MsG0280007043.01.T01:CDS |
| TCTTTGCTTCCGGGTCTGCA+AGG | 0.550301 | 2:+9826834 | None:intergenic |
| AGGTTGTCGATGATATACTT+TGG | 0.551047 | 2:-9825010 | MsG0280007043.01.T01:CDS |
| GTACAAAGAGTTCACGTGGT+TGG | 0.551890 | 2:-9824921 | MsG0280007043.01.T01:CDS |
| CTCAAGACAGAAATGACTTG+TGG | 0.553027 | 2:+9825764 | None:intergenic |
| GCTATTATGTAGGTCTGCTG+TGG | 0.561033 | 2:-9826002 | MsG0280007043.01.T01:intron |
| GTGTTGGAATTAATGGCTGA+TGG | 0.562505 | 2:-9825941 | MsG0280007043.01.T01:CDS |
| GGGTCTGCAAGGTCGACGAC+AGG | 0.566966 | 2:+9826845 | None:intergenic |
| GAAAATGTGCTGTCTAGTGT+TGG | 0.570738 | 2:-9825957 | MsG0280007043.01.T01:CDS |
| CTGTCTAACCGGTGTCCTCA+GGG | 0.572937 | 2:-9827600 | MsG0280007043.01.T01:intron |
| AGCAATGTACAATTCAAGGC+TGG | 0.573618 | 2:-9824888 | MsG0280007043.01.T01:CDS |
| TTGTCGATGATATACTTTGG+AGG | 0.583079 | 2:-9825007 | MsG0280007043.01.T01:CDS |
| AGCAAAGACTCTTATAGTGA+AGG | 0.588277 | 2:-9826819 | MsG0280007043.01.T01:CDS |
| GTTGCACCTCAGGGCACGGT+GGG | 0.593851 | 2:+9825837 | None:intergenic |
| TGGCTGACACAACAAAGTCA+AGG | 0.599938 | 2:-9825030 | MsG0280007043.01.T01:CDS |
| TGCAGGTATTGACTAATGGT+AGG | 0.608292 | 2:-9825078 | MsG0280007043.01.T01:intron |
| GATGGTTTGGGATTGAGCCA+AGG | 0.610838 | 2:-9825923 | MsG0280007043.01.T01:CDS |
| CAGTCAGAGAAAGACAGAGC+TGG | 0.620304 | 2:-9826696 | MsG0280007043.01.T01:CDS |
| GGAATTTGGATTCTTCAAAG+TGG | 0.621903 | 2:-9826789 | MsG0280007043.01.T01:intron |
| AACCATTACCCTGAGGACAC+CGG | 0.623538 | 2:+9827592 | None:intergenic |
| GTTTGTACAAAGAGTTCACG+TGG | 0.638221 | 2:-9824925 | MsG0280007043.01.T01:CDS |
| TGTTGCACCTCAGGGCACGG+TGG | 0.643786 | 2:+9825836 | None:intergenic |
| CCATAACCAAAAGGATCAGG+AGG | 0.661844 | 2:+9826672 | None:intergenic |
| CCATTACCCACCGTGCCCTG+AGG | 0.673400 | 2:-9825843 | MsG0280007043.01.T01:CDS |
| ACTTGTTAGAGATAACATCA+GGG | 0.698450 | 2:+9826586 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GATATTTATATTATTTACTT+AGG | + | Chr2:9825170-9825189 | None:intergenic | 10.0% |
| !! | AAGTAAGAAATTATTAATGT+TGG | + | Chr2:9825543-9825562 | None:intergenic | 15.0% |
| !! | ATGAATAAAAAAAAGGTTAA+AGG | + | Chr2:9826946-9826965 | None:intergenic | 15.0% |
| !! | ATTTAATGATTGACATTAAT+TGG | + | Chr2:9827091-9827110 | None:intergenic | 15.0% |
| !! | TTTATTCTTTATTAGTCATT+TGG | + | Chr2:9826056-9826075 | None:intergenic | 15.0% |
| !! | TTTGTAAATTGAAAATTGTA+CGG | - | Chr2:9826096-9826115 | MsG0280007043.01.T01:intron | 15.0% |
| !!! | AAATATATATCTTTTGACAA+AGG | - | Chr2:9825242-9825261 | MsG0280007043.01.T01:intron | 15.0% |
| !!! | ACAAATTATTTTAGATAGAA+TGG | - | Chr2:9825030-9825049 | MsG0280007043.01.T01:CDS | 15.0% |
| !!! | TATTTTTCTCTTTTTAAATG+TGG | - | Chr2:9827200-9827219 | MsG0280007043.01.T01:intron | 15.0% |
| !!! | TCATAAAAGTTTACTTATTT+TGG | - | Chr2:9824956-9824975 | MsG0280007043.01.T01:CDS | 15.0% |
| !!! | TCTTTTTTTAACATTAAAGA+TGG | + | Chr2:9827500-9827519 | None:intergenic | 15.0% |
| !!! | TTTCTTTTTTGATACTAAAA+AGG | + | Chr2:9827248-9827267 | None:intergenic | 15.0% |
| !! | AAATTTAAATGGAATACATG+TGG | + | Chr2:9827276-9827295 | None:intergenic | 20.0% |
| !! | AATTTAAATGGAATACATGT+GGG | + | Chr2:9827275-9827294 | None:intergenic | 20.0% |
| !! | ATGTGTAATTTATACATGTT+TGG | + | Chr2:9826379-9826398 | None:intergenic | 20.0% |
| !! | TTATACCAAGTTGTAAAAAA+TGG | + | Chr2:9826288-9826307 | None:intergenic | 20.0% |
| !! | TTTAACATTAAAGATGGTAA+AGG | + | Chr2:9827494-9827513 | None:intergenic | 20.0% |
| !!! | AATATCGATTTTTCAAAAAG+TGG | - | Chr2:9825184-9825203 | MsG0280007043.01.T01:intron | 20.0% |
| !!! | ATTTTTCTTTTCATTCACAT+TGG | + | Chr2:9825226-9825245 | None:intergenic | 20.0% |
| !!! | GAGTCTTATGAATAAAAAAA+AGG | + | Chr2:9826953-9826972 | None:intergenic | 20.0% |
| !!! | TCCATTTAAATTTTTGAAGT+GGG | - | Chr2:9827283-9827302 | MsG0280007043.01.T01:intron | 20.0% |
| !!! | TGGTTTAATTGTTTTAATCA+TGG | - | Chr2:9826025-9826044 | MsG0280007043.01.T01:intron | 20.0% |
| !!! | TTCCATTTAAATTTTTGAAG+TGG | - | Chr2:9827282-9827301 | MsG0280007043.01.T01:intron | 20.0% |
| ! | AAATTGGACATAAATTCCAA+TGG | + | Chr2:9825701-9825720 | None:intergenic | 25.0% |
| ! | AACATTGAAAAGGAAAAACA+GGG | + | Chr2:9825962-9825981 | None:intergenic | 25.0% |
| ! | AACTTGGTATAATGTATGTT+TGG | - | Chr2:9826296-9826315 | MsG0280007043.01.T01:intron | 25.0% |
| ! | ACAAAAGTGAATCCATTATA+AGG | - | Chr2:9826329-9826348 | MsG0280007043.01.T01:intron | 25.0% |
| ! | AGAAAAATAATTGAGAGACT+TGG | + | Chr2:9827189-9827208 | None:intergenic | 25.0% |
| ! | AGAAGAAAAATAGAGATGAA+GGG | + | Chr2:9825439-9825458 | None:intergenic | 25.0% |
| ! | AGATGAAAGCAATATAAGAA+AGG | + | Chr2:9825468-9825487 | None:intergenic | 25.0% |
| ! | ATAAACACATAACTAACATG+AGG | + | Chr2:9826405-9826424 | None:intergenic | 25.0% |
| ! | ATACCATATAAGCTTCAATT+AGG | + | Chr2:9825092-9825111 | None:intergenic | 25.0% |
| ! | ATTGGAATTTATGTCCAATT+TGG | - | Chr2:9825700-9825719 | MsG0280007043.01.T01:CDS | 25.0% |
| ! | CGATTAGATATGTTATATGT+TGG | - | Chr2:9826832-9826851 | MsG0280007043.01.T01:CDS | 25.0% |
| ! | GAAAGAAAAGGATATTTATG+TGG | + | Chr2:9825284-9825303 | None:intergenic | 25.0% |
| ! | TAAACACATAACTAACATGA+GGG | + | Chr2:9826404-9826423 | None:intergenic | 25.0% |
| ! | TAGAGATAACATCCTTATAA+TGG | + | Chr2:9826344-9826363 | None:intergenic | 25.0% |
| ! | TCAATTAGGACAAATAGATT+AGG | + | Chr2:9825078-9825097 | None:intergenic | 25.0% |
| !! | GGTTTAGAATTAATTTCAAC+CGG | - | Chr2:9826257-9826276 | MsG0280007043.01.T01:intron | 25.0% |
| !! | GTTTAAAAGTGTAAAGCATA+GGG | - | Chr2:9827394-9827413 | MsG0280007043.01.T01:intron | 25.0% |
| !! | TTCTAAACCAATTTTTATCG+TGG | + | Chr2:9826246-9826265 | None:intergenic | 25.0% |
| !!! | CATTTAAATTTTTGAAGTGG+GGG | - | Chr2:9827285-9827304 | MsG0280007043.01.T01:intron | 25.0% |
| !!! | CCATTTAAATTTTTGAAGTG+GGG | - | Chr2:9827284-9827303 | MsG0280007043.01.T01:intron | 25.0% |
| !!! | CTTTTCAATGTTGATAAAAC+CGG | - | Chr2:9825970-9825989 | MsG0280007043.01.T01:CDS | 25.0% |
| !!! | TTAGATTTTGTCGATTTTCA+CGG | + | Chr2:9825903-9825922 | None:intergenic | 25.0% |
| !!! | TTGCCATAAGATTTTTCAAA+AGG | + | Chr2:9827605-9827624 | None:intergenic | 25.0% |
| AAATTATATAGTGACCCATC+TGG | + | Chr2:9825365-9825384 | None:intergenic | 30.0% | |
| ACATTGAAAAGGAAAAACAG+GGG | + | Chr2:9825961-9825980 | None:intergenic | 30.0% | |
| AGAAAGCAATGTACAATTCA+AGG | - | Chr2:9827558-9827577 | MsG0280007043.01.T01:intron | 30.0% | |
| CAACATTGAAAAGGAAAAAC+AGG | + | Chr2:9825963-9825982 | None:intergenic | 30.0% | |
| CCATAAACTGAAAATCTCAT+CGG | + | Chr2:9826008-9826027 | None:intergenic | 30.0% | |
| CCCCACTTCAAAAATTTAAA+TGG | + | Chr2:9827287-9827306 | None:intergenic | 30.0% | |
| GAGAAGAAAAATAGAGATGA+AGG | + | Chr2:9825440-9825459 | None:intergenic | 30.0% | |
| GATAGAATGGAATTCCAATT+CGG | - | Chr2:9825043-9825062 | MsG0280007043.01.T01:CDS | 30.0% | |
| GATGTTAACCAATGTTCTTA+TGG | - | Chr2:9824978-9824997 | MsG0280007043.01.T01:CDS | 30.0% | |
| GGTTATCAAACATTCTAACT+TGG | - | Chr2:9827319-9827338 | MsG0280007043.01.T01:intron | 30.0% | |
| GTGAAAATCGACAAAATCTA+AGG | - | Chr2:9825902-9825921 | MsG0280007043.01.T01:CDS | 30.0% | |
| TACTATAAATGTGTATGCCA+AGG | - | Chr2:9825327-9825346 | MsG0280007043.01.T01:intron | 30.0% | |
| TAGAATTAATTTCAACCGGT+TGG | - | Chr2:9826261-9826280 | MsG0280007043.01.T01:intron | 30.0% | |
| TCATGTTGTGAAAATTAGAC+CGG | + | Chr2:9826201-9826220 | None:intergenic | 30.0% | |
| TGAAAGCAATATAAGAAAGG+AGG | + | Chr2:9825465-9825484 | None:intergenic | 30.0% | |
| TGTCCTAATTGAAGCTTATA+TGG | - | Chr2:9825086-9825105 | MsG0280007043.01.T01:intron | 30.0% | |
| TTAGGTTAGAAAAACCGAAT+TGG | + | Chr2:9825060-9825079 | None:intergenic | 30.0% | |
| ! | ACTTGTTAGAGATAACATCA+GGG | + | Chr2:9825867-9825886 | None:intergenic | 30.0% |
| ! | AGTAAGAGAATTGGTTCAAA+TGG | - | Chr2:9825802-9825821 | MsG0280007043.01.T01:CDS | 30.0% |
| ! | AGTTTTGCCACGATAAAAAT+TGG | - | Chr2:9826236-9826255 | MsG0280007043.01.T01:intron | 30.0% |
| ! | ATGGTAATGCATGAAAGTTA+AGG | + | Chr2:9825400-9825419 | None:intergenic | 30.0% |
| ! | ATTTGGAAAATGAAGCACTA+AGG | - | Chr2:9825717-9825736 | MsG0280007043.01.T01:CDS | 30.0% |
| ! | GGTTTAAAAGTGTAAAGCAT+AGG | - | Chr2:9827393-9827412 | MsG0280007043.01.T01:intron | 30.0% |
| ! | TAGTGCTTCATTTTCCAAAT+TGG | + | Chr2:9825717-9825736 | None:intergenic | 30.0% |
| ! | TGGTAATGCATGAAAGTTAA+GGG | + | Chr2:9825399-9825418 | None:intergenic | 30.0% |
| ! | TTCATTCACATTGGTTGAAT+TGG | + | Chr2:9825217-9825236 | None:intergenic | 30.0% |
| !! | CACTTCTTTTTCATCAATGT+TGG | - | Chr2:9826778-9826797 | MsG0280007043.01.T01:intron | 30.0% |
| !! | CGGTTTTATCAACATTGAAA+AGG | + | Chr2:9825972-9825991 | None:intergenic | 30.0% |
| !!! | AACAACCATGGTTTTGTTTT+TGG | + | Chr2:9825511-9825530 | None:intergenic | 30.0% |
| !!! | ACAACCATGGTTTTGTTTTT+GGG | + | Chr2:9825510-9825529 | None:intergenic | 30.0% |
| !!! | GCTACTTTTTGCTATTATGT+AGG | - | Chr2:9826438-9826457 | MsG0280007043.01.T01:intron | 30.0% |
| !!! | TTGGTCCATTTTTTACAACT+TGG | - | Chr2:9826280-9826299 | MsG0280007043.01.T01:intron | 30.0% |
| AACTAGTGCCATAAGAACAT+TGG | + | Chr2:9824989-9825008 | None:intergenic | 35.0% | |
| AAGCAATATAAGAAAGGAGG+AGG | + | Chr2:9825462-9825481 | None:intergenic | 35.0% | |
| AATGCATGAAAGTTAAGGGA+GGG | + | Chr2:9825395-9825414 | None:intergenic | 35.0% | |
| ACTATAAGAGTCTTTGCTTC+CGG | + | Chr2:9825629-9825648 | None:intergenic | 35.0% | |
| ACTTGCTTAAACACATTCCT+TGG | + | Chr2:9826547-9826566 | None:intergenic | 35.0% | |
| AGCAAAGACTCTTATAGTGA+AGG | - | Chr2:9825631-9825650 | MsG0280007043.01.T01:intron | 35.0% | |
| AGGTTGTCGATGATATACTT+TGG | - | Chr2:9827440-9827459 | MsG0280007043.01.T01:intron | 35.0% | |
| ATACCCCAAAAACAAAACCA+TGG | - | Chr2:9825503-9825522 | MsG0280007043.01.T01:intron | 35.0% | |
| CAGTCTTTGAATTGATCGAA+TGG | + | Chr2:9827131-9827150 | None:intergenic | 35.0% | |
| CATTCGATCAATTCAAAGAC+TGG | - | Chr2:9827129-9827148 | MsG0280007043.01.T01:intron | 35.0% | |
| CCATCAACAACTTTGTTGAA+TGG | - | Chr2:9825578-9825597 | MsG0280007043.01.T01:intron | 35.0% | |
| CCATTCAACAAAGTTGTTGA+TGG | + | Chr2:9825581-9825600 | None:intergenic | 35.0% | |
| CTCTTACTTCCATAACCAAA+AGG | + | Chr2:9825790-9825809 | None:intergenic | 35.0% | |
| GAATTAATGGCTGATGGTTT+GGG | - | Chr2:9826515-9826534 | MsG0280007043.01.T01:intron | 35.0% | |
| GGAATTTGGATTCTTCAAAG+TGG | - | Chr2:9825661-9825680 | MsG0280007043.01.T01:intron | 35.0% | |
| GGTTATGGAAGTAAGAGAAT+TGG | - | Chr2:9825793-9825812 | MsG0280007043.01.T01:CDS | 35.0% | |
| GTTGTAAAAAATGGACCAAC+CGG | + | Chr2:9826279-9826298 | None:intergenic | 35.0% | |
| TAAATTCCAATGGAACACCA+TGG | + | Chr2:9825691-9825710 | None:intergenic | 35.0% | |
| TAATGCATGAAAGTTAAGGG+AGG | + | Chr2:9825396-9825415 | None:intergenic | 35.0% | |
| TCTTATAGTGAAGGCTTGTA+AGG | - | Chr2:9825640-9825659 | MsG0280007043.01.T01:intron | 35.0% | |
| TTGAGATCTAATAGCACATC+AGG | - | Chr2:9826704-9826723 | MsG0280007043.01.T01:intron | 35.0% | |
| TTGTCGATGATATACTTTGG+AGG | - | Chr2:9827443-9827462 | MsG0280007043.01.T01:intron | 35.0% | |
| ! | AAGTGTAAAGCATAGGGTTT+TGG | - | Chr2:9827400-9827419 | MsG0280007043.01.T01:intron | 35.0% |
| ! | ATTGGTTCAAATGGTGATGT+TGG | - | Chr2:9825811-9825830 | MsG0280007043.01.T01:CDS | 35.0% |
| ! | CATCAGGGTTAGTATTAAGA+AGG | + | Chr2:9825852-9825871 | None:intergenic | 35.0% |
| ! | CCGATGAGATTTTCAGTTTA+TGG | - | Chr2:9826005-9826024 | MsG0280007043.01.T01:intron | 35.0% |
| ! | CTGTCTAGTGTTGGAATTAA+TGG | - | Chr2:9826502-9826521 | MsG0280007043.01.T01:intron | 35.0% |
| ! | GATGAAAAAGAAGTGTGATC+AGG | + | Chr2:9826773-9826792 | None:intergenic | 35.0% |
| ! | TCAAGACAGAAATGACTTGT+GGG | + | Chr2:9826688-9826707 | None:intergenic | 35.0% |
| ! | TGAATGGAAGGAATTTGCTT+GGG | - | Chr2:9826645-9826664 | MsG0280007043.01.T01:CDS | 35.0% |
| ! | TTCAAATGGTGATGTTGGTT+GGG | - | Chr2:9825816-9825835 | MsG0280007043.01.T01:CDS | 35.0% |
| ! | TTGAATGGAAGGAATTTGCT+TGG | - | Chr2:9826644-9826663 | MsG0280007043.01.T01:CDS | 35.0% |
| !! | ATATGTTGGTGATACTCTTC+AGG | - | Chr2:9826846-9826865 | MsG0280007043.01.T01:CDS | 35.0% |
| !! | GACTTGTTAGAGATAACATC+AGG | + | Chr2:9825868-9825887 | None:intergenic | 35.0% |
| !! | GGGCCTTTTGAAAAATCTTA+TGG | - | Chr2:9827599-9827618 | MsG0280007043.01.T01:intron | 35.0% |
| !! | TTGATGCAGGTATTGACTAA+TGG | - | Chr2:9827368-9827387 | MsG0280007043.01.T01:intron | 35.0% |
| !!! | CAACCATGGTTTTGTTTTTG+GGG | + | Chr2:9825509-9825528 | None:intergenic | 35.0% |
| !!! | TAATGGATTCACTTTTGTCG+TGG | + | Chr2:9826327-9826346 | None:intergenic | 35.0% |
| !!! | TTGTCGATTTTCACGGTAAA+AGG | + | Chr2:9825896-9825915 | None:intergenic | 35.0% |
| AGCAATGTACAATTCAAGGC+TGG | - | Chr2:9827562-9827581 | MsG0280007043.01.T01:intron | 40.0% | |
| ATGCATGAAAGTTAAGGGAG+GGG | + | Chr2:9825394-9825413 | None:intergenic | 40.0% | |
| ATTCCTTAACCATTACCCTG+AGG | + | Chr2:9824868-9824887 | None:intergenic | 40.0% | |
| CTATAAGAGTCTTTGCTTCC+GGG | + | Chr2:9825628-9825647 | None:intergenic | 40.0% | |
| CTCAAGACAGAAATGACTTG+TGG | + | Chr2:9826689-9826708 | None:intergenic | 40.0% | |
| CTTCCATAACCAAAAGGATC+AGG | + | Chr2:9825784-9825803 | None:intergenic | 40.0% | |
| GAAAATGTGCTGTCTAGTGT+TGG | - | Chr2:9826493-9826512 | MsG0280007043.01.T01:intron | 40.0% | |
| GACATATACGAGTCATGTTC+TGG | - | Chr2:9826991-9827010 | MsG0280007043.01.T01:intron | 40.0% | |
| GAGAGAGAGAGAGAAAGAAA+AGG | + | Chr2:9825296-9825315 | None:intergenic | 40.0% | |
| GGAATTAATGGCTGATGGTT+TGG | - | Chr2:9826514-9826533 | MsG0280007043.01.T01:intron | 40.0% | |
| GTATATGTCGAGAAAGGTCT+TGG | + | Chr2:9826980-9826999 | None:intergenic | 40.0% | |
| GTGAAGGCTTGTAAGGAATT+TGG | - | Chr2:9825647-9825666 | MsG0280007043.01.T01:intron | 40.0% | |
| GTGTGTGTTGAAATTGATGC+AGG | - | Chr2:9827355-9827374 | MsG0280007043.01.T01:intron | 40.0% | |
| GTGTTGGAATTAATGGCTGA+TGG | - | Chr2:9826509-9826528 | MsG0280007043.01.T01:intron | 40.0% | |
| GTTTGTACAAAGAGTTCACG+TGG | - | Chr2:9827525-9827544 | MsG0280007043.01.T01:intron | 40.0% | |
| TGACTCGTATATGTCGAGAA+AGG | + | Chr2:9826986-9827005 | None:intergenic | 40.0% | |
| TGGCTTAGACAAAACAACCA+TGG | + | Chr2:9825523-9825542 | None:intergenic | 40.0% | |
| TTCCATCAGTGAGACAGATT+TGG | + | Chr2:9826733-9826752 | None:intergenic | 40.0% | |
| TTCTTCAAAGTGGTGAACCA+TGG | - | Chr2:9825671-9825690 | MsG0280007043.01.T01:intron | 40.0% | |
| ! | AACAAGCAGCATTGAATGGA+AGG | - | Chr2:9826633-9826652 | MsG0280007043.01.T01:CDS | 40.0% |
| ! | AAGGAATTTGCTTGGGTTTG+GGG | - | Chr2:9826652-9826671 | MsG0280007043.01.T01:CDS | 40.0% |
| ! | ACTATCTTTTCACTCAAGGG+TGG | + | Chr2:9827470-9827489 | None:intergenic | 40.0% |
| ! | AGGCACTATCTTTTCACTCA+AGG | + | Chr2:9827474-9827493 | None:intergenic | 40.0% |
| ! | GAAAAAGAAGTGTGATCAGG+TGG | + | Chr2:9826770-9826789 | None:intergenic | 40.0% |
| ! | GAAGGAATTTGCTTGGGTTT+GGG | - | Chr2:9826651-9826670 | MsG0280007043.01.T01:CDS | 40.0% |
| ! | GATCAAGTTGCAAATCGTAG+AGG | - | Chr2:9827161-9827180 | MsG0280007043.01.T01:intron | 40.0% |
| ! | GGCACTATCTTTTCACTCAA+GGG | + | Chr2:9827473-9827492 | None:intergenic | 40.0% |
| ! | GGGTGCTTTAAATGGAGAAA+TGG | + | Chr2:9825419-9825438 | None:intergenic | 40.0% |
| ! | GTTCAAATGGTGATGTTGGT+TGG | - | Chr2:9825815-9825834 | MsG0280007043.01.T01:CDS | 40.0% |
| !! | CAATGTTGGTGATACTCTTC+AGG | - | Chr2:9826792-9826811 | MsG0280007043.01.T01:CDS | 40.0% |
| !! | GAGATGAAGGGTGCTTTAAA+TGG | + | Chr2:9825427-9825446 | None:intergenic | 40.0% |
| !! | TGCAGGTATTGACTAATGGT+AGG | - | Chr2:9827372-9827391 | MsG0280007043.01.T01:intron | 40.0% |
| ACGGTCAATAGTCCTATAGC+GGG | + | Chr2:9826142-9826161 | None:intergenic | 45.0% | |
| CACGGTCAATAGTCCTATAG+CGG | + | Chr2:9826143-9826162 | None:intergenic | 45.0% | |
| CCATAACCAAAAGGATCAGG+AGG | + | Chr2:9825781-9825800 | None:intergenic | 45.0% | |
| CTCCAAATCTGTCTCACTGA+TGG | - | Chr2:9826728-9826747 | MsG0280007043.01.T01:intron | 45.0% | |
| CTGTCTCACTGATGGAACTT+GGG | - | Chr2:9826736-9826755 | MsG0280007043.01.T01:intron | 45.0% | |
| GCTATTATGTAGGTCTGCTG+TGG | - | Chr2:9826448-9826467 | MsG0280007043.01.T01:intron | 45.0% | |
| GTACAAAGAGTTCACGTGGT+TGG | - | Chr2:9827529-9827548 | MsG0280007043.01.T01:intron | 45.0% | |
| GTTGTGAAAATTAGACCGGC+CGG | + | Chr2:9826197-9826216 | None:intergenic | 45.0% | |
| TCTGTCTCACTGATGGAACT+TGG | - | Chr2:9826735-9826754 | MsG0280007043.01.T01:intron | 45.0% | |
| TGGCTGACACAACAAAGTCA+AGG | - | Chr2:9827420-9827439 | MsG0280007043.01.T01:intron | 45.0% | |
| TTGTACGGTTGAACAAACCG+CGG | - | Chr2:9826111-9826130 | MsG0280007043.01.T01:intron | 45.0% | |
| ! | AGGCTGGCTGATTATAGACT+TGG | - | Chr2:9827578-9827597 | MsG0280007043.01.T01:intron | 45.0% |
| ! | GGAAGGAATTTGCTTGGGTT+TGG | - | Chr2:9826650-9826669 | MsG0280007043.01.T01:CDS | 45.0% |
| ! | GGCTGGCTGATTATAGACTT+GGG | - | Chr2:9827579-9827598 | MsG0280007043.01.T01:intron | 45.0% |
| ! | GTGCAACAAGCAGCATTGAA+TGG | - | Chr2:9826629-9826648 | MsG0280007043.01.T01:CDS | 45.0% |
| ! | TGAAGTGGGGGTCTGTTTTA+AGG | - | Chr2:9827297-9827316 | MsG0280007043.01.T01:intron | 45.0% |
| ! | TGTCCTCAGGGTAATGGTTA+AGG | - | Chr2:9824862-9824881 | MsG0280007043.01.T01:CDS | 45.0% |
| !! | CCTCCTGATCCTTTTGGTTA+TGG | - | Chr2:9825778-9825797 | MsG0280007043.01.T01:CDS | 45.0% |
| !! | GAAGTGGGGGTCTGTTTTAA+GGG | - | Chr2:9827298-9827317 | MsG0280007043.01.T01:intron | 45.0% |
| AACCATTACCCTGAGGACAC+CGG | + | Chr2:9824861-9824880 | None:intergenic | 50.0% | |
| ACCGTGTTTGAACCAACAGC+CGG | - | Chr2:9826157-9826176 | MsG0280007043.01.T01:intron | 50.0% | |
| AGGTGACAATGAGAGCCAGA+TGG | - | Chr2:9825347-9825366 | MsG0280007043.01.T01:intron | 50.0% | |
| CAGTCAGAGAAAGACAGAGC+TGG | - | Chr2:9825754-9825773 | MsG0280007043.01.T01:CDS | 50.0% | |
| GCTCTGTCTTTCTCTGACTG+TGG | + | Chr2:9825754-9825773 | None:intergenic | 50.0% | |
| GGTGAACCATGGTGTTCCAT+TGG | - | Chr2:9825682-9825701 | MsG0280007043.01.T01:CDS | 50.0% | |
| GGTGACAATGAGAGCCAGAT+GGG | - | Chr2:9825348-9825367 | MsG0280007043.01.T01:intron | 50.0% | |
| TCATCGGTCGATCACTGTTC+CGG | + | Chr2:9825992-9826011 | None:intergenic | 50.0% | |
| ! | AATGCTGCTTGTTGCACCTC+AGG | + | Chr2:9826626-9826645 | None:intergenic | 50.0% |
| ! | ATGCTGCTTGTTGCACCTCA+GGG | + | Chr2:9826625-9826644 | None:intergenic | 50.0% |
| ! | GATGGTTTGGGATTGAGCCA+AGG | - | Chr2:9826527-9826546 | MsG0280007043.01.T01:intron | 50.0% |
| !! | TCCGGCTGTTGGTTCAAACA+CGG | + | Chr2:9826161-9826180 | None:intergenic | 50.0% |
| !! | TCTGGCTCTCATTGTCACCT+TGG | + | Chr2:9825347-9825366 | None:intergenic | 50.0% |
| AACCGGTGTCCTCAGGGTAA+TGG | - | Chr2:9824856-9824875 | MsG0280007043.01.T01:CDS | 55.0% | |
| CTGTCTAACCGGTGTCCTCA+GGG | - | Chr2:9824850-9824869 | MsG0280007043.01.T01:CDS | 55.0% | |
| GTTTGAACCAACAGCCGGAC+TGG | - | Chr2:9826162-9826181 | MsG0280007043.01.T01:intron | 55.0% | |
| TCTGTCTAACCGGTGTCCTC+AGG | - | Chr2:9824849-9824868 | MsG0280007043.01.T01:CDS | 55.0% | |
| TCTTTGCTTCCGGGTCTGCA+AGG | + | Chr2:9825619-9825638 | None:intergenic | 55.0% | |
| ! | GCTGGTCCTCCTGATCCTTT+TGG | - | Chr2:9825772-9825791 | MsG0280007043.01.T01:CDS | 55.0% |
| TGTCGTCGACCTTGCAGACC+CGG | - | Chr2:9825607-9825626 | MsG0280007043.01.T01:intron | 60.0% | |
| ! | GCTTGTTGCACCTCAGGGCA+CGG | + | Chr2:9826620-9826639 | None:intergenic | 60.0% |
| !! | TCCTATAGCGGGTTGAGCCG+CGG | + | Chr2:9826131-9826150 | None:intergenic | 60.0% |
| ACCGCGGCTCAACCCGCTAT+AGG | - | Chr2:9826127-9826146 | MsG0280007043.01.T01:intron | 65.0% | |
| CAACCAGCCAGTCCGGCTGT+TGG | + | Chr2:9826172-9826191 | None:intergenic | 65.0% | |
| CCATTACCCACCGTGCCCTG+AGG | - | Chr2:9826607-9826626 | MsG0280007043.01.T01:CDS | 65.0% | |
| CCTCAGGGCACGGTGGGTAA+TGG | + | Chr2:9826610-9826629 | None:intergenic | 65.0% | |
| GGGTCTGCAAGGTCGACGAC+AGG | + | Chr2:9825608-9825627 | None:intergenic | 65.0% | |
| GTTGCACCTCAGGGCACGGT+GGG | + | Chr2:9826616-9826635 | None:intergenic | 65.0% | |
| TGTTGCACCTCAGGGCACGG+TGG | + | Chr2:9826617-9826636 | None:intergenic | 65.0% | |
| ! | GACTGGCTGGTTGAACCGGC+CGG | - | Chr2:9826179-9826198 | MsG0280007043.01.T01:intron | 65.0% |
| ! | GCCGGTTCAACCAGCCAGTC+CGG | + | Chr2:9826179-9826198 | None:intergenic | 65.0% |
| !! | GAACCAACAGCCGGACTGGC+TGG | - | Chr2:9826166-9826185 | MsG0280007043.01.T01:intron | 65.0% |
| !! | GCCGGACTGGCTGGTTGAAC+CGG | - | Chr2:9826175-9826194 | MsG0280007043.01.T01:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr2 | gene | 9824844 | 9827628 | 9824844 | ID=MsG0280007043.01;Name=MsG0280007043.01 |
| Chr2 | mRNA | 9824844 | 9827628 | 9824844 | ID=MsG0280007043.01.T01;Parent=MsG0280007043.01;Name=MsG0280007043.01.T01;_AED=0.33;_eAED=0.33;_QI=0|0|0|0.8|1|1|5|0|309 |
| Chr2 | exon | 9827601 | 9827628 | 9827601 | ID=MsG0280007043.01.T01:exon:2239;Parent=MsG0280007043.01.T01 |
| Chr2 | exon | 9826790 | 9826932 | 9826790 | ID=MsG0280007043.01.T01:exon:2238;Parent=MsG0280007043.01.T01 |
| Chr2 | exon | 9826549 | 9826715 | 9826549 | ID=MsG0280007043.01.T01:exon:2237;Parent=MsG0280007043.01.T01 |
| Chr2 | exon | 9825673 | 9826012 | 9825673 | ID=MsG0280007043.01.T01:exon:2236;Parent=MsG0280007043.01.T01 |
| Chr2 | exon | 9824844 | 9825095 | 9824844 | ID=MsG0280007043.01.T01:exon:2235;Parent=MsG0280007043.01.T01 |
| Chr2 | CDS | 9827601 | 9827628 | 9827601 | ID=MsG0280007043.01.T01:cds;Parent=MsG0280007043.01.T01 |
| Chr2 | CDS | 9826790 | 9826932 | 9826790 | ID=MsG0280007043.01.T01:cds;Parent=MsG0280007043.01.T01 |
| Chr2 | CDS | 9826549 | 9826715 | 9826549 | ID=MsG0280007043.01.T01:cds;Parent=MsG0280007043.01.T01 |
| Chr2 | CDS | 9825673 | 9826012 | 9825673 | ID=MsG0280007043.01.T01:cds;Parent=MsG0280007043.01.T01 |
| Chr2 | CDS | 9824844 | 9825095 | 9824844 | ID=MsG0280007043.01.T01:cds;Parent=MsG0280007043.01.T01 |
| Gene Sequence |
| Protein sequence |
