AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880044346.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880044346.01.T01 MTR_8g059485 97.333 450 12 0 1 450 10 459 0.0 901
MsG0880044346.01.T01 MTR_8g059485 97.333 450 12 0 1 450 1 450 0.0 901
MsG0880044346.01.T01 MTR_2g075910 60.663 483 147 12 1 453 1 470 0.0 531
MsG0880044346.01.T01 MTR_8g087400 42.672 464 234 8 1 437 1 459 3.27e-119 356
MsG0880044346.01.T01 MTR_4g025420 41.388 389 211 8 61 439 34 415 1.53e-89 279
MsG0880044346.01.T01 MTR_0178s0030 34.509 397 236 9 59 440 139 526 3.75e-61 208
MsG0880044346.01.T01 MTR_3g462150 30.244 410 252 11 52 436 77 477 2.54e-48 172
MsG0880044346.01.T01 MTR_5g075180 32.021 381 224 9 65 438 89 441 1.67e-46 167
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880044346.01.T01 AT1G53380 52.967 455 192 8 1 437 1 451 4.01e-164 471
MsG0880044346.01.T01 AT1G53380 52.967 455 192 8 1 437 1 451 4.01e-164 471
MsG0880044346.01.T01 AT1G53380 52.967 455 192 8 1 437 1 451 4.01e-164 471
MsG0880044346.01.T01 AT1G53380 52.967 455 192 8 1 437 1 451 4.01e-164 471
MsG0880044346.01.T01 AT1G53380 52.967 455 192 8 1 437 1 451 4.01e-164 471
MsG0880044346.01.T01 AT3G14870 51.064 470 197 11 1 441 5 470 1.30e-157 455
MsG0880044346.01.T01 AT3G14870 51.064 470 197 11 1 441 2 467 1.51e-157 454
MsG0880044346.01.T01 AT3G14870 51.064 470 197 11 1 441 1 466 1.81e-157 454
MsG0880044346.01.T01 AT3G14870 51.064 470 197 11 1 441 1 466 1.81e-157 454
MsG0880044346.01.T01 AT3G14870 51.064 470 197 11 1 441 1 466 1.81e-157 454
MsG0880044346.01.T01 AT1G29300 41.151 469 227 9 1 437 1 452 5.64e-110 333
MsG0880044346.01.T01 AT2G45260 40.052 387 216 7 63 437 37 419 1.48e-87 274
MsG0880044346.01.T01 AT3G60680 34.805 385 230 9 64 437 120 494 7.02e-61 206
MsG0880044346.01.T01 AT2G30380 34.127 378 203 9 66 438 76 412 8.18e-51 177
MsG0880044346.01.T01 AT4G34080 37.132 272 158 5 63 324 13 281 2.53e-48 167
MsG0880044346.01.T01 AT5G58960 31.188 404 239 13 63 436 86 480 7.45e-46 166
MsG0880044346.01.T01 AT5G58960 31.188 404 239 13 63 436 86 480 7.45e-46 166
MsG0880044346.01.T01 AT5G58960 31.188 404 239 13 63 436 161 555 3.11e-45 166
MsG0880044346.01.T01 AT4G33320 34.122 296 171 7 45 329 5 287 2.50e-43 154
MsG0880044346.01.T01 AT2G32130 44.800 125 67 1 64 188 35 157 4.76e-25 101
MsG0880044346.01.T01 AT4G36100 43.011 93 48 2 63 152 13 103 3.25e-15 75.5
MsG0880044346.01.T01 AT1G12330 23.715 253 159 5 207 447 252 482 6.65e-11 64.7

Find 103 sgRNAs with CRISPR-Local

Find 311 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAAGAAACTCTTGGGTTTA+AGG 0.124364 8:+40358581 None:intergenic
ACGAAATTTCCTGGGCTAAT+TGG 0.188145 8:+40358466 None:intergenic
TTAAAGAAAATGTTGTTTAT+AGG 0.196054 8:-40354329 MsG0880044346.01.T01:CDS
AAGATGGCAAAAGGTGATTT+TGG 0.202616 8:+40354123 None:intergenic
AAAGAATGATGCCTCCATTT+TGG 0.219724 8:+40354068 None:intergenic
GCTCTTCATCTTCTTCTTCA+TGG 0.223159 8:+40354916 None:intergenic
TTGGTTTATTCCTGATTTCT+TGG 0.223831 8:-40358037 MsG0880044346.01.T01:five_prime_UTR
AGCTAAACAATCCCTGTTAT+TGG 0.244219 8:+40353471 None:intergenic
CTGCTGCTACCTTTGTTTCA+TGG 0.248535 8:+40353703 None:intergenic
CAGGGATTGTTTAGCTGTTA+TGG 0.256879 8:-40353464 MsG0880044346.01.T01:three_prime_UTR
AATTGTTGCAGCCGAATTAA+AGG 0.260563 8:-40354670 MsG0880044346.01.T01:CDS
TCATTGTGATTATCGAAATA+AGG 0.260665 8:+40354237 None:intergenic
CAAGCTGAAATATTTCAAAT+AGG 0.264277 8:-40353925 MsG0880044346.01.T01:CDS
TATGGTTGTCCATTTGTATT+TGG 0.277265 8:-40353617 MsG0880044346.01.T01:three_prime_UTR
GTTCACTTCATTTGCTGAAA+TGG 0.292950 8:-40353995 MsG0880044346.01.T01:CDS
TGGGTTTAAGGGTGAGTTAT+AGG 0.303144 8:+40358593 None:intergenic
GAGTTTCTTACGAAATTTCC+TGG 0.315975 8:+40358457 None:intergenic
AAAATGGAGGCATCATTCTT+TGG 0.328174 8:-40354066 MsG0880044346.01.T01:CDS
AAAGAAACTCTTGGGTTTAA+GGG 0.339582 8:+40358582 None:intergenic
GTTGATATTAGGCCAATAAC+AGG 0.353090 8:-40353483 MsG0880044346.01.T01:three_prime_UTR
GTTGCTTTCACTGTAGTTCC+AGG 0.358020 8:-40353817 MsG0880044346.01.T01:CDS
GTTTCTTAAAGAGAAGTTAG+AGG 0.364153 8:-40354565 MsG0880044346.01.T01:CDS
AAGCTGAAATATTTCAAATA+GGG 0.377206 8:-40353924 MsG0880044346.01.T01:CDS
AGAATCGAAGTCGCTTCTTA+AGG 0.377855 8:-40354601 MsG0880044346.01.T01:CDS
GAGACTAGTTCACTCCAAAA+TGG 0.381698 8:-40354082 MsG0880044346.01.T01:CDS
TTATGACCGTGATGGAATTC+AGG 0.383293 8:-40354793 MsG0880044346.01.T01:CDS
AGGTCTTGAGCATTTGCAAT+AGG 0.386745 8:-40353579 MsG0880044346.01.T01:three_prime_UTR
ACTCTTCAGCTCCTTTAATT+CGG 0.393760 8:+40354659 None:intergenic
GACCCCACAATTATATTCTA+TGG 0.416268 8:-40353670 MsG0880044346.01.T01:three_prime_UTR
TCGAAGCTTTGTGAAGTTGT+TGG 0.425314 8:-40354406 MsG0880044346.01.T01:CDS
GAATTCCATCACGGTCATAA+GGG 0.426429 8:+40354796 None:intergenic
TGAATTCCATCACGGTCATA+AGG 0.426822 8:+40354795 None:intergenic
TTTGGCCATTTGAAAAGAAA+AGG 0.430266 8:-40353599 MsG0880044346.01.T01:three_prime_UTR
TTCAAATGGCCAAATACAAA+TGG 0.438247 8:+40353608 None:intergenic
GTTTATTCCTGATTTCTTGG+AGG 0.440063 8:-40358034 MsG0880044346.01.T01:intron
TGAGATGAGGTCTGCTGGTT+GGG 0.446327 8:-40354379 MsG0880044346.01.T01:CDS
TAAATAACATTCTGAAGAAA+AGG 0.447836 8:+40353550 None:intergenic
CATTGTGATTATCGAAATAA+GGG 0.448793 8:+40354238 None:intergenic
TATTCTATGGTCTGTGCTGT+GGG 0.456244 8:-40353657 MsG0880044346.01.T01:three_prime_UTR
CTGAAATGGCTAAGAGGGTA+TGG 0.458646 8:-40353981 MsG0880044346.01.T01:CDS
AACAAAGAGAAAGAAACTCT+TGG 0.461289 8:+40358573 None:intergenic
TTTCCTGGGCTAATTGGAAA+AGG 0.463107 8:+40358472 None:intergenic
TGCTGATAAATTAATAATCT+CGG 0.463917 8:-40354769 MsG0880044346.01.T01:CDS
ACAAAGAGAAAGAAACTCTT+GGG 0.466159 8:+40358574 None:intergenic
ATAATAACCCATAAAATCGT+TGG 0.470514 8:-40354633 MsG0880044346.01.T01:CDS
TAATAACCCATAAAATCGTT+GGG 0.472142 8:-40354632 MsG0880044346.01.T01:CDS
ACTGGAGTTGCACAAGTTGA+TGG 0.474543 8:-40354972 MsG0880044346.01.T01:CDS
ATACATACCTCCAAGAAATC+AGG 0.476405 8:+40358027 None:intergenic
GTGAACAAGTTGTTGTCATC+GGG 0.477261 8:+40354012 None:intergenic
CATTTGCTGAAATGGCTAAG+AGG 0.480109 8:-40353987 MsG0880044346.01.T01:CDS
GGACTGAGTCAGCTTTGATA+TGG 0.482953 8:-40353635 MsG0880044346.01.T01:three_prime_UTR
GTTTATGAGATGAGGTCTGC+TGG 0.485996 8:-40354384 MsG0880044346.01.T01:CDS
AAAATAGCAAGGAGTAAAGA+GGG 0.491449 8:+40353352 None:intergenic
AAAGCTTCGCAGCAAGCAAA+CGG 0.495645 8:-40358535 MsG0880044346.01.T01:five_prime_UTR
TAGCTGAGTTAAAGCAATGT+TGG 0.501226 8:-40354734 MsG0880044346.01.T01:CDS
ACAACATAATAACAACGTCT+TGG 0.504733 8:-40358056 MsG0880044346.01.T01:five_prime_UTR
CTTGATAATCTACACATCTC+AGG 0.509716 8:-40354480 MsG0880044346.01.T01:CDS
TTGCATATGTTAAAAGTAGT+AGG 0.513422 8:-40353425 MsG0880044346.01.T01:three_prime_UTR
ACCCAACAAAAGATGGCAAA+AGG 0.514310 8:+40354114 None:intergenic
ATGAGATGAGGTCTGCTGGT+TGG 0.514994 8:-40354380 MsG0880044346.01.T01:CDS
CAGATTCTCTGATGTATACA+TGG 0.519514 8:-40353893 MsG0880044346.01.T01:CDS
ATTCAATTTCGATCCTTCAC+CGG 0.523812 8:-40354700 MsG0880044346.01.T01:CDS
ACAATTGCTCCCTCCGGTGA+AGG 0.525485 8:+40354687 None:intergenic
GCTGCAACAATTGCTCCCTC+CGG 0.528419 8:+40354681 None:intergenic
GACATGAAACAAAGGAATGT+TGG 0.529644 8:-40354042 MsG0880044346.01.T01:CDS
ATTTGAAATATTTCAGCTTG+AGG 0.530973 8:+40353928 None:intergenic
TTATTATGCAGTTTAATCAA+AGG 0.535844 8:-40353523 MsG0880044346.01.T01:three_prime_UTR
AGACCATAGAATATAATTGT+GGG 0.539227 8:+40353667 None:intergenic
ATTTGCTGAAATGGCTAAGA+GGG 0.540204 8:-40353986 MsG0880044346.01.T01:CDS
GAAATATTTCAAATAGGGAA+AGG 0.542615 8:-40353919 MsG0880044346.01.T01:CDS
AGTGAACAAGTTGTTGTCAT+CGG 0.555601 8:+40354011 None:intergenic
AGTTTCTTACGAAATTTCCT+GGG 0.562697 8:+40358458 None:intergenic
AACAGAACAAGTTAATTGAA+AGG 0.567554 8:-40354533 MsG0880044346.01.T01:CDS
ATATTCTATGGTCTGTGCTG+TGG 0.568361 8:-40353658 MsG0880044346.01.T01:three_prime_UTR
GTATTTCACCCAACAAAAGA+TGG 0.568758 8:+40354107 None:intergenic
CTTCGTGTAAAATCAATGAC+TGG 0.569128 8:-40354990 MsG0880044346.01.T01:CDS
AGAGCAGATATAAAATGTGT+AGG 0.585231 8:+40354450 None:intergenic
CAGACCATAGAATATAATTG+TGG 0.585506 8:+40353666 None:intergenic
ACATTGCTTTAACTCAGCTA+AGG 0.585709 8:+40354737 None:intergenic
AGTTGTTGGTTTATGAGATG+AGG 0.591437 8:-40354392 MsG0880044346.01.T01:CDS
CAATTTCGATCCTTCACCGG+AGG 0.591877 8:-40354697 MsG0880044346.01.T01:CDS
TCTTAAAGAGAAGTTAGAGG+AGG 0.599840 8:-40354562 MsG0880044346.01.T01:CDS
AATTCCATCACGGTCATAAG+GGG 0.601774 8:+40354797 None:intergenic
CGAGCTAGTTTACTCTTGTG+TGG 0.604460 8:+40355029 None:intergenic
GAAAGGAGGTTAAATCAAAG+TGG 0.604775 8:-40354516 MsG0880044346.01.T01:CDS
TTCGAATTGATTTAACCGCA+TGG 0.605097 8:+40354424 None:intergenic
AATTTCGATCCTTCACCGGA+GGG 0.612988 8:-40354696 MsG0880044346.01.T01:CDS
AGAACAAGTTAATTGAAAGG+AGG 0.617633 8:-40354530 MsG0880044346.01.T01:CDS
GTTAAAATCAGTGAATGCAA+AGG 0.621096 8:-40354163 MsG0880044346.01.T01:CDS
GAATCCCCTTATGACCGTGA+TGG 0.621817 8:-40354801 MsG0880044346.01.T01:CDS
TATATCTGCTCTTCGCCATG+CGG 0.624174 8:-40354439 MsG0880044346.01.T01:CDS
ATGTCACTTCCATGAAACAA+AGG 0.627933 8:-40353712 MsG0880044346.01.T01:exon
CTTACTTAATACAACACAAG+TGG 0.640580 8:-40358510 MsG0880044346.01.T01:five_prime_UTR
GACCATAGAATATAATTGTG+GGG 0.649201 8:+40353668 None:intergenic
TTGATATTAGGCCAATAACA+GGG 0.651790 8:-40353482 MsG0880044346.01.T01:three_prime_UTR
TCTTTGGTGACATGAAACAA+AGG 0.654420 8:-40354050 MsG0880044346.01.T01:CDS
TAACATTCTGAAGAAAAGGA+CGG 0.658975 8:+40353554 None:intergenic
TGTGATTATCGAAATAAGGG+AGG 0.664917 8:+40354241 None:intergenic
CATATGTTAAAAGTAGTAGG+TGG 0.670267 8:-40353422 MsG0880044346.01.T01:three_prime_UTR
CAGCATCCTGAATTCCATCA+CGG 0.672142 8:+40354787 None:intergenic
ACTAGTTCACTCCAAAATGG+AGG 0.674833 8:-40354079 MsG0880044346.01.T01:CDS
ATTCTATGGTCTGTGCTGTG+GGG 0.685456 8:-40353656 MsG0880044346.01.T01:three_prime_UTR
GTGGCTGTGATAACTGTGAG+AGG 0.701707 8:+40353755 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATTTATATATAAAATAAA+AGG - Chr8:40355343-40355362 MsG0880044346.01.T01:intron 0.0%
!! AATATAATATTTCAATACAA+GGG + Chr8:40354352-40354371 None:intergenic 10.0%
!!! AAATTTTTTATATTCTACAA+GGG - Chr8:40354057-40354076 MsG0880044346.01.T01:CDS 10.0%
!!! ATAATTAGTGTTTTTTTTTT+AGG - Chr8:40354493-40354512 MsG0880044346.01.T01:CDS 10.0%
!!! TAATTAGTGTTTTTTTTTTA+GGG - Chr8:40354494-40354513 MsG0880044346.01.T01:CDS 10.0%
!! CAATAAAATATGTAGAAATA+AGG - Chr8:40356426-40356445 MsG0880044346.01.T01:intron 15.0%
!! GAAAAATATTGAATACTAAT+TGG + Chr8:40353682-40353701 None:intergenic 15.0%
!! GAATATAATATTTCAATACA+AGG + Chr8:40354353-40354372 None:intergenic 15.0%
!!! AAAGATCAAAATATTTTGAA+CGG - Chr8:40355478-40355497 MsG0880044346.01.T01:intron 15.0%
!!! AAGAATGAAATTAATTTGAA+TGG - Chr8:40354881-40354900 MsG0880044346.01.T01:CDS 15.0%
!!! AAGTATTTTTTACCAATAAA+AGG + Chr8:40354791-40354810 None:intergenic 15.0%
!!! AATTGTATTAATGTTTTTTG+AGG - Chr8:40354089-40354108 MsG0880044346.01.T01:CDS 15.0%
!!! ATTGTATTAATGTTTTTTGA+GGG - Chr8:40354090-40354109 MsG0880044346.01.T01:CDS 15.0%
!!! CAAATTTTTTATATTCTACA+AGG - Chr8:40354056-40354075 MsG0880044346.01.T01:CDS 15.0%
!!! GAAATGTTATTTTAATATAG+GGG - Chr8:40354903-40354922 MsG0880044346.01.T01:CDS 15.0%
!!! GGAAATGTTATTTTAATATA+GGG - Chr8:40354902-40354921 MsG0880044346.01.T01:CDS 15.0%
!!! TATTTCTACATATTTTATTG+TGG + Chr8:40356426-40356445 None:intergenic 15.0%
!!! TGGAAATGTTATTTTAATAT+AGG - Chr8:40354901-40354920 MsG0880044346.01.T01:CDS 15.0%
!!! TTAAAGAAAATGTTGTTTAT+AGG - Chr8:40357595-40357614 MsG0880044346.01.T01:intron 15.0%
!! AAGCTGAAATATTTCAAATA+GGG - Chr8:40358000-40358019 MsG0880044346.01.T01:intron 20.0%
!! AATAGTTAACAACTAATTAG+TGG - Chr8:40354567-40354586 MsG0880044346.01.T01:CDS 20.0%
!! AATTTCAATCCAAAAAAACA+AGG + Chr8:40356453-40356472 None:intergenic 20.0%
!! AGTGTTTAAAAAGAATAAGT+AGG + Chr8:40356794-40356813 None:intergenic 20.0%
!! ATAAAATTATCATGCAAAGA+TGG - Chr8:40354446-40354465 MsG0880044346.01.T01:CDS 20.0%
!! ATTATAACGAAGAATGAAAA+TGG + Chr8:40356835-40356854 None:intergenic 20.0%
!! GTGTTTAAAAAGAATAAGTA+GGG + Chr8:40356793-40356812 None:intergenic 20.0%
!! TAAAATTATCATGCAAAGAT+GGG - Chr8:40354447-40354466 MsG0880044346.01.T01:CDS 20.0%
!! TGCTGATAAATTAATAATCT+CGG - Chr8:40357155-40357174 MsG0880044346.01.T01:intron 20.0%
!! TTATTATGCAGTTTAATCAA+AGG - Chr8:40358401-40358420 MsG0880044346.01.T01:intron 20.0%
!!! AACAAAACACAATTTTTCTT+TGG - Chr8:40357726-40357745 MsG0880044346.01.T01:intron 20.0%
!!! AATTGTGTTTTGTTTTTATC+AGG + Chr8:40357720-40357739 None:intergenic 20.0%
!!! ACAAAACACAATTTTTCTTT+GGG - Chr8:40357727-40357746 MsG0880044346.01.T01:intron 20.0%
!!! AGTTTCATTGAATTTAGTTT+TGG - Chr8:40356198-40356217 MsG0880044346.01.T01:intron 20.0%
!!! GTTATGATAGTGAAATTAAA+AGG - Chr8:40355737-40355756 MsG0880044346.01.T01:intron 20.0%
!!! TAAATAACATTCTGAAGAAA+AGG + Chr8:40358377-40358396 None:intergenic 20.0%
!!! TTCTTTTTATTTTCTGATTC+TGG - Chr8:40353814-40353833 MsG0880044346.01.T01:CDS 20.0%
!!! TTTAGGATAAAAAAGAGAAT+TGG + Chr8:40356384-40356403 None:intergenic 20.0%
! AAAATTATCATGCAAAGATG+GGG - Chr8:40354448-40354467 MsG0880044346.01.T01:CDS 25.0%
! AACAGAACAAGTTAATTGAA+AGG - Chr8:40357391-40357410 MsG0880044346.01.T01:intron 25.0%
! AAGAGAGATTAAAAAGTAGT+GGG - Chr8:40354246-40354265 MsG0880044346.01.T01:CDS 25.0%
! AATGGAACAACAAAATTAAG+AGG + Chr8:40354325-40354344 None:intergenic 25.0%
! ACCAGATTATCTACATATAA+GGG - Chr8:40355832-40355851 MsG0880044346.01.T01:intron 25.0%
! AGACCATAGAATATAATTGT+GGG + Chr8:40358260-40358279 None:intergenic 25.0%
! AGTGTATGTATTAGTTGAAA+TGG - Chr8:40354518-40354537 MsG0880044346.01.T01:CDS 25.0%
! AGTTCCTGCAAATATAAAAA+TGG - Chr8:40354384-40354403 MsG0880044346.01.T01:CDS 25.0%
! ATAATAACCCATAAAATCGT+TGG - Chr8:40357291-40357310 MsG0880044346.01.T01:intron 25.0%
! ATATCTCAAATGCATGAATA+TGG + Chr8:40356028-40356047 None:intergenic 25.0%
! ATTATCTACATATAAGGGAA+GGG - Chr8:40355837-40355856 MsG0880044346.01.T01:intron 25.0%
! CAACGAAGATTAAAATACTA+CGG - Chr8:40355952-40355971 MsG0880044346.01.T01:intron 25.0%
! CAAGCTGAAATATTTCAAAT+AGG - Chr8:40357999-40358018 MsG0880044346.01.T01:intron 25.0%
! CAAGTTAAATTAATCTCCTT+TGG - Chr8:40353963-40353982 MsG0880044346.01.T01:CDS 25.0%
! CAGAATCATAATCTTAAAGT+TGG - Chr8:40353595-40353614 MsG0880044346.01.T01:three_prime_UTR 25.0%
! CATTGTGATTATCGAAATAA+GGG + Chr8:40357689-40357708 None:intergenic 25.0%
! CGTTATAATTCTTCTATAGA+TGG - Chr8:40356846-40356865 MsG0880044346.01.T01:intron 25.0%
! GAAATATTTCAAATAGGGAA+AGG - Chr8:40358005-40358024 MsG0880044346.01.T01:intron 25.0%
! GAAATTAAGTCATCAAAAGA+TGG + Chr8:40356771-40356790 None:intergenic 25.0%
! TAAATGTTTGTCTTAGTTAG+TGG - Chr8:40355369-40355388 MsG0880044346.01.T01:intron 25.0%
! TAATAACCCATAAAATCGTT+GGG - Chr8:40357292-40357311 MsG0880044346.01.T01:intron 25.0%
! TATTATATAGATGAGAGAGA+AGG - Chr8:40355220-40355239 MsG0880044346.01.T01:intron 25.0%
! TCATTGTGATTATCGAAATA+AGG + Chr8:40357690-40357709 None:intergenic 25.0%
! TTAATTCAGATATCTGACAA+GGG + Chr8:40355931-40355950 None:intergenic 25.0%
! TTCTCCTTAAAAAAATAGCA+AGG + Chr8:40358586-40358605 None:intergenic 25.0%
! TTGCATATGTTAAAAGTAGT+AGG - Chr8:40358499-40358518 MsG0880044346.01.T01:five_prime_UTR 25.0%
! TTTAATTCAGATATCTGACA+AGG + Chr8:40355932-40355951 None:intergenic 25.0%
!! AAGATTTAAAATCTGCAGTT+CGG - Chr8:40356111-40356130 MsG0880044346.01.T01:intron 25.0%
!! ATTTGAAATATTTCAGCTTG+AGG + Chr8:40357999-40358018 None:intergenic 25.0%
!! TTGACTATTCCTTTTATGTT+AGG - Chr8:40356223-40356242 MsG0880044346.01.T01:intron 25.0%
!! TTGTTTAGAAATGTCTTTTG+AGG - Chr8:40356593-40356612 MsG0880044346.01.T01:intron 25.0%
!!! AAATAAGGACCTTGTTTTTT+TGG - Chr8:40356441-40356460 MsG0880044346.01.T01:intron 25.0%
!!! AAATACTACACTTTTTTCAC+GGG - Chr8:40354754-40354773 MsG0880044346.01.T01:CDS 25.0%
!!! AAGTTGGTGTTTTTTCAAAA+AGG - Chr8:40353611-40353630 MsG0880044346.01.T01:three_prime_UTR 25.0%
!!! AATTGAGTCTTTTGTTTGTA+GGG - Chr8:40357641-40357660 MsG0880044346.01.T01:intron 25.0%
!!! AGCTTAATTAGTTTGTGTTT+TGG + Chr8:40356320-40356339 None:intergenic 25.0%
!!! CACAAAGTTTTGTTGATATT+AGG - Chr8:40358430-40358449 MsG0880044346.01.T01:intron 25.0%
!!! CTTCTTTATAGTTTTAGTAG+TGG - Chr8:40355651-40355670 MsG0880044346.01.T01:intron 25.0%
!!! GAAATACTACACTTTTTTCA+CGG - Chr8:40354753-40354772 MsG0880044346.01.T01:CDS 25.0%
!!! GTAACCATTTTTATATTTGC+AGG + Chr8:40354391-40354410 None:intergenic 25.0%
!!! TACTCCTTGCTATTTTTTTA+AGG - Chr8:40358579-40358598 MsG0880044346.01.T01:five_prime_UTR 25.0%
!!! TTTATAGTTTTAGTAGTGGA+TGG - Chr8:40355655-40355674 MsG0880044346.01.T01:intron 25.0%
AAAAAAAAACTATGTCACCC+AGG + Chr8:40355138-40355157 None:intergenic 30.0%
AAAAATAGCAAGGAGTAAAG+AGG + Chr8:40358576-40358595 None:intergenic 30.0%
AAAATAGCAAGGAGTAAAGA+GGG + Chr8:40358575-40358594 None:intergenic 30.0%
AAAGAAACTCTTGGGTTTAA+GGG + Chr8:40353345-40353364 None:intergenic 30.0%
AAATAGGTATCTCTTGTGAT+GGG - Chr8:40355678-40355697 MsG0880044346.01.T01:intron 30.0%
AACAAAGAGAAAGAAACTCT+TGG + Chr8:40353354-40353373 None:intergenic 30.0%
AAGAGGAATCCTAACATAAA+AGG + Chr8:40356235-40356254 None:intergenic 30.0%
ACAAAGAGAAAGAAACTCTT+GGG + Chr8:40353353-40353372 None:intergenic 30.0%
ACAACATAATAACAACGTCT+TGG - Chr8:40353868-40353887 MsG0880044346.01.T01:CDS 30.0%
ACCACTTTACAAATAAGTTC+TGG - Chr8:40356341-40356360 MsG0880044346.01.T01:intron 30.0%
ACCAGAACTTATTTGTAAAG+TGG + Chr8:40356345-40356364 None:intergenic 30.0%
AGAAATAGAGTAGATTTGAG+GGG + Chr8:40355003-40355022 None:intergenic 30.0%
AGAACAAGTTAATTGAAAGG+AGG - Chr8:40357394-40357413 MsG0880044346.01.T01:intron 30.0%
AGAGCAGATATAAAATGTGT+AGG + Chr8:40357477-40357496 None:intergenic 30.0%
AGTGAAATTAAAAGGCAATG+TGG - Chr8:40355745-40355764 MsG0880044346.01.T01:intron 30.0%
AGTTTCTTACGAAATTTCCT+GGG + Chr8:40353469-40353488 None:intergenic 30.0%
CAGACCATAGAATATAATTG+TGG + Chr8:40358261-40358280 None:intergenic 30.0%
CATATGTTAAAAGTAGTAGG+TGG - Chr8:40358502-40358521 MsG0880044346.01.T01:five_prime_UTR 30.0%
CTTACTTAATACAACACAAG+TGG - Chr8:40353414-40353433 MsG0880044346.01.T01:three_prime_UTR 30.0%
GAAAGTAGATTTCTCTTGTT+TGG - Chr8:40354206-40354225 MsG0880044346.01.T01:CDS 30.0%
GAAGAGAGATTAAAAAGTAG+TGG - Chr8:40354245-40354264 MsG0880044346.01.T01:CDS 30.0%
GACCAGATTATCTACATATA+AGG - Chr8:40355831-40355850 MsG0880044346.01.T01:intron 30.0%
GACCATAGAATATAATTGTG+GGG + Chr8:40358259-40358278 None:intergenic 30.0%
GAGAAATAGAGTAGATTTGA+GGG + Chr8:40355004-40355023 None:intergenic 30.0%
GATTATCTACATATAAGGGA+AGG - Chr8:40355836-40355855 MsG0880044346.01.T01:intron 30.0%
GATTCATGTATGGATTTCTT+GGG - Chr8:40353989-40354008 MsG0880044346.01.T01:CDS 30.0%
GCTTAATCCAATTTCACAAA+AGG - Chr8:40356174-40356193 MsG0880044346.01.T01:intron 30.0%
GTGAAATTAAAAGGCAATGT+GGG - Chr8:40355746-40355765 MsG0880044346.01.T01:intron 30.0%
GTTAAAATCAGTGAATGCAA+AGG - Chr8:40357761-40357780 MsG0880044346.01.T01:intron 30.0%
GTTTCTTAAAGAGAAGTTAG+AGG - Chr8:40357359-40357378 MsG0880044346.01.T01:intron 30.0%
TATGGTTGTCCATTTGTATT+TGG - Chr8:40358307-40358326 MsG0880044346.01.T01:intron 30.0%
TCCCTTATATGTAGATAATC+TGG + Chr8:40355836-40355855 None:intergenic 30.0%
TCCTTACAATAGAGAAGAAA+GGG - Chr8:40354289-40354308 MsG0880044346.01.T01:CDS 30.0%
TGAAGAGCTTAAGAAAAAAG+TGG - Chr8:40357023-40357042 MsG0880044346.01.T01:intron 30.0%
TGAGAAATAGAGTAGATTTG+AGG + Chr8:40355005-40355024 None:intergenic 30.0%
TGATTCATGTATGGATTTCT+TGG - Chr8:40353988-40354007 MsG0880044346.01.T01:CDS 30.0%
TGTAAAATAGCAATCAAGCA+AGG + Chr8:40353945-40353964 None:intergenic 30.0%
TGTAAGGAGAAATCAAAAAG+TGG + Chr8:40354277-40354296 None:intergenic 30.0%
TGTTTGGTTGAAGAGAAATA+AGG - Chr8:40354149-40354168 MsG0880044346.01.T01:CDS 30.0%
TTCAAATGGCCAAATACAAA+TGG + Chr8:40358319-40358338 None:intergenic 30.0%
TTCTGTGATTCATAATCCTT+AGG + Chr8:40355873-40355892 None:intergenic 30.0%
TTGATATTAGGCCAATAACA+GGG - Chr8:40358442-40358461 MsG0880044346.01.T01:intron 30.0%
TTGGTTTATTCCTGATTTCT+TGG - Chr8:40353887-40353906 MsG0880044346.01.T01:CDS 30.0%
TTTCAATACAAGGGCAAAAA+TGG + Chr8:40354343-40354362 None:intergenic 30.0%
TTTGGCCATTTGAAAAGAAA+AGG - Chr8:40358325-40358344 MsG0880044346.01.T01:intron 30.0%
! AAACACAATTTTTCTTTGGG+AGG - Chr8:40357730-40357749 MsG0880044346.01.T01:intron 30.0%
! ATTCCTCTTTGAAAGGAAAT+GGG - Chr8:40356246-40356265 MsG0880044346.01.T01:intron 30.0%
! CAAGACCTTTTCTTTTCAAA+TGG + Chr8:40358333-40358352 None:intergenic 30.0%
! CTACATATTTTATTGTGGAC+AGG + Chr8:40356421-40356440 None:intergenic 30.0%
! GAAAATGCTACACCTTTTAT+TGG - Chr8:40354776-40354795 MsG0880044346.01.T01:CDS 30.0%
! GAAACTACCTTTTGTGAAAT+TGG + Chr8:40356184-40356203 None:intergenic 30.0%
! GTTTGGAATGAAGAGAAATA+GGG - Chr8:40354223-40354242 MsG0880044346.01.T01:CDS 30.0%
! GTTTTACCAATCTTAAAACC+TGG + Chr8:40358128-40358147 None:intergenic 30.0%
! TAACATTCTGAAGAAAAGGA+CGG + Chr8:40358373-40358392 None:intergenic 30.0%
! TAAGTTCTGGTTACTTTGAA+TGG - Chr8:40356354-40356373 MsG0880044346.01.T01:intron 30.0%
! TCATGCATTTGAGATATCAA+TGG - Chr8:40356031-40356050 MsG0880044346.01.T01:intron 30.0%
! TGTTTGGAATGAAGAGAAAT+AGG - Chr8:40354222-40354241 MsG0880044346.01.T01:CDS 30.0%
!! CAATTGAGTCTTTTGTTTGT+AGG - Chr8:40357640-40357659 MsG0880044346.01.T01:intron 30.0%
!!! TTTTAGTAGTGGATGGAAAT+AGG - Chr8:40355662-40355681 MsG0880044346.01.T01:intron 30.0%
AAAGCACAACACAAGACAAT+GGG + Chr8:40354120-40354139 None:intergenic 35.0%
AAATAGCAATCAAGCAAGGA+AGG + Chr8:40353941-40353960 None:intergenic 35.0%
AACAAGGACTCATATCAAAG+TGG + Chr8:40355787-40355806 None:intergenic 35.0%
AACAGTGGGAAAACAGTAAA+TGG - Chr8:40355416-40355435 MsG0880044346.01.T01:intron 35.0%
AAGGAGAAATCAAAAAGTGG+TGG + Chr8:40354274-40354293 None:intergenic 35.0%
AATTGTTGCAGCCGAATTAA+AGG - Chr8:40357254-40357273 MsG0880044346.01.T01:intron 35.0%
ACAAGGACTCATATCAAAGT+GGG + Chr8:40355786-40355805 None:intergenic 35.0%
ACACTAAGATGAGAATCTAC+CGG + Chr8:40355310-40355329 None:intergenic 35.0%
ACATTGCTTTAACTCAGCTA+AGG + Chr8:40357190-40357209 None:intergenic 35.0%
ACTCTTCAGCTCCTTTAATT+CGG + Chr8:40357268-40357287 None:intergenic 35.0%
AGCTAAACAATCCCTGTTAT+TGG + Chr8:40358456-40358475 None:intergenic 35.0%
AGGAGAAATCAAAAAGTGGT+GGG + Chr8:40354273-40354292 None:intergenic 35.0%
AGTGAACAAGTTGTTGTCAT+CGG + Chr8:40357916-40357935 None:intergenic 35.0%
ATACATACCTCCAAGAAATC+AGG + Chr8:40353900-40353919 None:intergenic 35.0%
ATACCAGTGTGTGATCATAA+AGG + Chr8:40355574-40355593 None:intergenic 35.0%
ATCATAAAGGGAAAAGGAAG+TGG + Chr8:40355561-40355580 None:intergenic 35.0%
ATGAGCGTACAACATACAAT+TGG + Chr8:40354663-40354682 None:intergenic 35.0%
ATGCTTTAACGCTTACATCA+AGG + Chr8:40356692-40356711 None:intergenic 35.0%
ATGGCAAAATCTTAACTGCA+GGG + Chr8:40356009-40356028 None:intergenic 35.0%
ATTCAATTTCGATCCTTCAC+CGG - Chr8:40357224-40357243 MsG0880044346.01.T01:intron 35.0%
CAGATTCTCTGATGTATACA+TGG - Chr8:40358031-40358050 MsG0880044346.01.T01:intron 35.0%
CCATACATGAATCAAACCAA+AGG + Chr8:40353982-40354001 None:intergenic 35.0%
CGATAGATAAGCTGAAAAGA+GGG + Chr8:40353571-40353590 None:intergenic 35.0%
CTAAATCAAACACACCCTTA+AGG - Chr8:40355082-40355101 MsG0880044346.01.T01:intron 35.0%
CTCCTTACAATAGAGAAGAA+AGG - Chr8:40354288-40354307 MsG0880044346.01.T01:CDS 35.0%
CTTCGTGTAAAATCAATGAC+TGG - Chr8:40356934-40356953 MsG0880044346.01.T01:intron 35.0%
GAAACTCCAACCTCTATTAA+AGG - Chr8:40356666-40356685 MsG0880044346.01.T01:intron 35.0%
GAAAGAAACTCTTGGGTTTA+AGG + Chr8:40353346-40353365 None:intergenic 35.0%
GAAAGGAGGTTAAATCAAAG+TGG - Chr8:40357408-40357427 MsG0880044346.01.T01:intron 35.0%
GAAATAGGTATCTCTTGTGA+TGG - Chr8:40355677-40355696 MsG0880044346.01.T01:intron 35.0%
GAAGTTGTGAAGAGAGAAAT+AGG + Chr8:40355058-40355077 None:intergenic 35.0%
GACATGAAACAAAGGAATGT+TGG - Chr8:40357882-40357901 MsG0880044346.01.T01:intron 35.0%
GACCCCACAATTATATTCTA+TGG - Chr8:40358254-40358273 MsG0880044346.01.T01:intron 35.0%
GAGTTTCTTACGAAATTTCC+TGG + Chr8:40353470-40353489 None:intergenic 35.0%
GATAGATAAGCTGAAAAGAG+GGG + Chr8:40353570-40353589 None:intergenic 35.0%
GTATTTCACCCAACAAAAGA+TGG + Chr8:40357820-40357839 None:intergenic 35.0%
GTGCTTTCTTACACTATGTT+TGG - Chr8:40354133-40354152 MsG0880044346.01.T01:CDS 35.0%
GTTGATATTAGGCCAATAAC+AGG - Chr8:40358441-40358460 MsG0880044346.01.T01:intron 35.0%
GTTTATTCCTGATTTCTTGG+AGG - Chr8:40353890-40353909 MsG0880044346.01.T01:CDS 35.0%
TACATCAAGGCCTTTAATAG+AGG + Chr8:40356679-40356698 None:intergenic 35.0%
TACCAGTGTGTGATCATAAA+GGG + Chr8:40355573-40355592 None:intergenic 35.0%
TAGCTGAGTTAAAGCAATGT+TGG - Chr8:40357190-40357209 MsG0880044346.01.T01:intron 35.0%
TATGGCAAAATCTTAACTGC+AGG + Chr8:40356010-40356029 None:intergenic 35.0%
TCATAAAGGGAAAAGGAAGT+GGG + Chr8:40355560-40355579 None:intergenic 35.0%
TCCCTTTCTTCTCTATTGTA+AGG + Chr8:40354293-40354312 None:intergenic 35.0%
TCTTAAAGAGAAGTTAGAGG+AGG - Chr8:40357362-40357381 MsG0880044346.01.T01:intron 35.0%
TGTATGGATTTCTTGGGTTA+TGG - Chr8:40353995-40354014 MsG0880044346.01.T01:CDS 35.0%
TGTGATTATCGAAATAAGGG+AGG + Chr8:40357686-40357705 None:intergenic 35.0%
TGTGTGATCATAAAGGGAAA+AGG + Chr8:40355567-40355586 None:intergenic 35.0%
TGTTAGGATTCCTCTTTGAA+AGG - Chr8:40356239-40356258 MsG0880044346.01.T01:intron 35.0%
TTACAATAGAGAAGAAAGGG+AGG - Chr8:40354292-40354311 MsG0880044346.01.T01:CDS 35.0%
! AAAGAATGATGCCTCCATTT+TGG + Chr8:40357859-40357878 None:intergenic 35.0%
! AAGATGGCAAAAGGTGATTT+TGG + Chr8:40357804-40357823 None:intergenic 35.0%
! ACCTTTTGCCATCTTTTGTT+GGG - Chr8:40357809-40357828 MsG0880044346.01.T01:intron 35.0%
! ACTTCTTCCCAACGATTTTA+TGG + Chr8:40357302-40357321 None:intergenic 35.0%
! ATGTCACTTCCATGAAACAA+AGG - Chr8:40358212-40358231 MsG0880044346.01.T01:intron 35.0%
! ATTTGCTGAAATGGCTAAGA+GGG - Chr8:40357938-40357957 MsG0880044346.01.T01:intron 35.0%
! CCTCTTTTCAGCTTATCTAT+CGG - Chr8:40353569-40353588 MsG0880044346.01.T01:three_prime_UTR 35.0%
! CTTCTTCCCAACGATTTTAT+GGG + Chr8:40357301-40357320 None:intergenic 35.0%
! CTTGATAATCTACACATCTC+AGG - Chr8:40357444-40357463 MsG0880044346.01.T01:intron 35.0%
! GATTCCTCTTTGAAAGGAAA+TGG - Chr8:40356245-40356264 MsG0880044346.01.T01:intron 35.0%
! GCATGTTTAGAAAGCTCTAA+AGG + Chr8:40356573-40356592 None:intergenic 35.0%
! GTTCACTTCATTTGCTGAAA+TGG - Chr8:40357929-40357948 MsG0880044346.01.T01:intron 35.0%
! TCTTTGGTGACATGAAACAA+AGG - Chr8:40357874-40357893 MsG0880044346.01.T01:intron 35.0%
! TTCGAATTGATTTAACCGCA+TGG + Chr8:40357503-40357522 None:intergenic 35.0%
! TTCTGGTTACTTTGAATGGT+GGG - Chr8:40356358-40356377 MsG0880044346.01.T01:intron 35.0%
! TTTCTTTTCACTTGAGCTTG+TGG + Chr8:40358191-40358210 None:intergenic 35.0%
!! AAAATGGAGGCATCATTCTT+TGG - Chr8:40357858-40357877 MsG0880044346.01.T01:intron 35.0%
!! AGTTGTTGGTTTATGAGATG+AGG - Chr8:40357532-40357551 MsG0880044346.01.T01:intron 35.0%
!! CCTTTGGTTTGATTCATGTA+TGG - Chr8:40353979-40353998 MsG0880044346.01.T01:CDS 35.0%
!!! GATTCTGGTTTTTGTTTTGC+AGG - Chr8:40353829-40353848 MsG0880044346.01.T01:CDS 35.0%
!!! GTAGTTCCAGGTTTTAAGAT+TGG - Chr8:40358119-40358138 MsG0880044346.01.T01:intron 35.0%
AATTCCATCACGGTCATAAG+GGG + Chr8:40357130-40357149 None:intergenic 40.0%
ACACCAGACATGTACCTTAA+GGG + Chr8:40355099-40355118 None:intergenic 40.0%
ACCCAACAAAAGATGGCAAA+AGG + Chr8:40357813-40357832 None:intergenic 40.0%
ACGAAATTTCCTGGGCTAAT+TGG + Chr8:40353461-40353480 None:intergenic 40.0%
ACTAGTTCACTCCAAAATGG+AGG - Chr8:40357845-40357864 MsG0880044346.01.T01:intron 40.0%
AGGTCTTGAGCATTTGCAAT+AGG - Chr8:40358345-40358364 MsG0880044346.01.T01:intron 40.0%
AGTAGATTTGAGGGGTTGTT+TGG + Chr8:40354995-40355014 None:intergenic 40.0%
AGTGGATGTTGAAATGACTG+TGG - Chr8:40355387-40355406 MsG0880044346.01.T01:intron 40.0%
ATATTCTATGGTCTGTGCTG+TGG - Chr8:40358266-40358285 MsG0880044346.01.T01:intron 40.0%
ATGGATTTCTTGGGTTATGG+TGG - Chr8:40353998-40354017 MsG0880044346.01.T01:CDS 40.0%
CAGGGATTGTTTAGCTGTTA+TGG - Chr8:40358460-40358479 MsG0880044346.01.T01:intron 40.0%
CAGTGAAAAGCAAAGCTTCA+AGG + Chr8:40356491-40356510 None:intergenic 40.0%
CATAAAGGGAAAAGGAAGTG+GGG + Chr8:40355559-40355578 None:intergenic 40.0%
CATGAAAAACTGCTGCATTC+AGG + Chr8:40356151-40356170 None:intergenic 40.0%
CCGATAGATAAGCTGAAAAG+AGG + Chr8:40353572-40353591 None:intergenic 40.0%
CTACCCATTTCCTTTCAAAG+AGG + Chr8:40356252-40356271 None:intergenic 40.0%
GAATTCCATCACGGTCATAA+GGG + Chr8:40357131-40357150 None:intergenic 40.0%
GAGAAGAGACGATAGAAGAA+AGG + Chr8:40353721-40353740 None:intergenic 40.0%
GATGTTGAAATGACTGTGGT+GGG - Chr8:40355391-40355410 MsG0880044346.01.T01:intron 40.0%
GCTCTTCATCTTCTTCTTCA+TGG + Chr8:40357011-40357030 None:intergenic 40.0%
GTGAACAAGTTGTTGTCATC+GGG + Chr8:40357915-40357934 None:intergenic 40.0%
TATCATGCAAAGATGGGGAT+TGG - Chr8:40354453-40354472 MsG0880044346.01.T01:CDS 40.0%
TATTCTATGGTCTGTGCTGT+GGG - Chr8:40358267-40358286 MsG0880044346.01.T01:intron 40.0%
TCAAAGTGGGATCATGACAA+AGG + Chr8:40355773-40355792 None:intergenic 40.0%
TCAAGGCCTTTAATAGAGGT+TGG + Chr8:40356675-40356694 None:intergenic 40.0%
TCCTTGTTGCAGACACATAT+AGG - Chr8:40355799-40355818 MsG0880044346.01.T01:intron 40.0%
TGAATTCCATCACGGTCATA+AGG + Chr8:40357132-40357151 None:intergenic 40.0%
TGGCAAAATCTTAACTGCAG+GGG + Chr8:40356008-40356027 None:intergenic 40.0%
TGGGTTTAAGGGTGAGTTAT+AGG + Chr8:40353334-40353353 None:intergenic 40.0%
TGTAGATAATCTGGTCTAGC+AGG + Chr8:40355827-40355846 None:intergenic 40.0%
TTCCCTTTATGATCACACAC+TGG - Chr8:40355568-40355587 MsG0880044346.01.T01:intron 40.0%
TTGTAGAGAGTCGTTAGTCA+TGG - Chr8:40355454-40355473 MsG0880044346.01.T01:intron 40.0%
TTTCCTGGGCTAATTGGAAA+AGG + Chr8:40353455-40353474 None:intergenic 40.0%
! CACCTTTTGCCATCTTTTGT+TGG - Chr8:40357808-40357827 MsG0880044346.01.T01:intron 40.0%
! CATTTGCTGAAATGGCTAAG+AGG - Chr8:40357937-40357956 MsG0880044346.01.T01:intron 40.0%
! GAAAGCACAACACAAGACAA+TGG + Chr8:40354121-40354140 None:intergenic 40.0%
! GAGACTAGTTCACTCCAAAA+TGG - Chr8:40357842-40357861 MsG0880044346.01.T01:intron 40.0%
! GTTCTGGTTACTTTGAATGG+TGG - Chr8:40356357-40356376 MsG0880044346.01.T01:intron 40.0%
! TCGAAGCTTTGTGAAGTTGT+TGG - Chr8:40357518-40357537 MsG0880044346.01.T01:intron 40.0%
! TTATGACCGTGATGGAATTC+AGG - Chr8:40357131-40357150 MsG0880044346.01.T01:intron 40.0%
! TTATTGTGGACAGGCTTTTC+AGG + Chr8:40356412-40356431 None:intergenic 40.0%
! TTTCCTTTTCCAATTAGCCC+AGG - Chr8:40353449-40353468 MsG0880044346.01.T01:three_prime_UTR 40.0%
!!! AGGCTTTTCAGGCTTTGTTT+AGG + Chr8:40356401-40356420 None:intergenic 40.0%
AAAGCTTCGCAGCAAGCAAA+CGG - Chr8:40353389-40353408 MsG0880044346.01.T01:three_prime_UTR 45.0%
AATTTCGATCCTTCACCGGA+GGG - Chr8:40357228-40357247 MsG0880044346.01.T01:intron 45.0%
ACACCCTTAAGGTACATGTC+TGG - Chr8:40355093-40355112 MsG0880044346.01.T01:intron 45.0%
ACATATAAGGGAAGGGCTCA+GGG - Chr8:40355844-40355863 MsG0880044346.01.T01:intron 45.0%
AGATGAGAATCTACCGGACA+CGG + Chr8:40355304-40355323 None:intergenic 45.0%
AGCAATCAAGCAAGGAAGGA+AGG + Chr8:40353937-40353956 None:intergenic 45.0%
ATGCAAAGATGGGGATTGGA+GGG - Chr8:40354457-40354476 MsG0880044346.01.T01:CDS 45.0%
ATTCTATGGTCTGTGCTGTG+GGG - Chr8:40358268-40358287 MsG0880044346.01.T01:intron 45.0%
CAGCATCCTGAATTCCATCA+CGG + Chr8:40357140-40357159 None:intergenic 45.0%
CTGAAATGGCTAAGAGGGTA+TGG - Chr8:40357943-40357962 MsG0880044346.01.T01:intron 45.0%
GACACCAGACATGTACCTTA+AGG + Chr8:40355100-40355119 None:intergenic 45.0%
GAGAAACTATAACACCCCTG+AGG + Chr8:40355707-40355726 None:intergenic 45.0%
GCCTATATGTGTCTGCAACA+AGG + Chr8:40355803-40355822 None:intergenic 45.0%
GGATCGATTAAGAGAGATCG+AGG - Chr8:40355241-40355260 MsG0880044346.01.T01:intron 45.0%
GGATGTTGAAATGACTGTGG+TGG - Chr8:40355390-40355409 MsG0880044346.01.T01:intron 45.0%
GTTTATGAGATGAGGTCTGC+TGG - Chr8:40357540-40357559 MsG0880044346.01.T01:intron 45.0%
TACATATAAGGGAAGGGCTC+AGG - Chr8:40355843-40355862 MsG0880044346.01.T01:intron 45.0%
TATATCTGCTCTTCGCCATG+CGG - Chr8:40357485-40357504 MsG0880044346.01.T01:intron 45.0%
! ACCTGGGTGACATAGCTTTT+GGG + Chr8:40355276-40355295 None:intergenic 45.0%
! ACTGGAGTTGCACAAGTTGA+TGG - Chr8:40356952-40356971 MsG0880044346.01.T01:intron 45.0%
! CGAGCTAGTTTACTCTTGTG+TGG + Chr8:40356898-40356917 None:intergenic 45.0%
! CTGCTGCTACCTTTGTTTCA+TGG + Chr8:40358224-40358243 None:intergenic 45.0%
! GGACTGAGTCAGCTTTGATA+TGG - Chr8:40358289-40358308 MsG0880044346.01.T01:intron 45.0%
! GTTGCTTTCACTGTAGTTCC+AGG - Chr8:40358107-40358126 MsG0880044346.01.T01:intron 45.0%
!! TTAAAAATAATTTAATCTTA+TGG + Chr8:40353492-40353511 None:intergenic 5.0%
!!! AAATATTTTTTAAACTATTT+TGG + Chr8:40354731-40354750 None:intergenic 5.0%
AAGGGAAAAGGAAGTGGGGT+TGG + Chr8:40355555-40355574 None:intergenic 50.0%
ACCTTGCGCACAGTACTGTA+CGG - Chr8:40354409-40354428 MsG0880044346.01.T01:CDS 50.0%
ATGAGATGAGGTCTGCTGGT+TGG - Chr8:40357544-40357563 MsG0880044346.01.T01:intron 50.0%
CAATTTCGATCCTTCACCGG+AGG - Chr8:40357227-40357246 MsG0880044346.01.T01:intron 50.0%
CACAACACAAGACAATGGGC+TGG + Chr8:40354116-40354135 None:intergenic 50.0%
CATGCAAAGATGGGGATTGG+AGG - Chr8:40354456-40354475 MsG0880044346.01.T01:CDS 50.0%
GAATCCCCTTATGACCGTGA+TGG - Chr8:40357123-40357142 MsG0880044346.01.T01:intron 50.0%
GCACAGTACTGTACGGATGA+AGG - Chr8:40354416-40354435 MsG0880044346.01.T01:CDS 50.0%
GTGGCTGTGATAACTGTGAG+AGG + Chr8:40358172-40358191 None:intergenic 50.0%
TGCAAAGATGGGGATTGGAG+GGG - Chr8:40354458-40354477 MsG0880044346.01.T01:CDS 50.0%
! CACCTGGGTGACATAGCTTT+TGG + Chr8:40355277-40355296 None:intergenic 50.0%
! CCTGGGTGACATAGCTTTTG+GGG + Chr8:40355275-40355294 None:intergenic 50.0%
! GACTGTGGTGGGAAAACAGT+GGG - Chr8:40355402-40355421 MsG0880044346.01.T01:intron 50.0%
! TCTTGTGATGGGATGCCTCA+GGG - Chr8:40355689-40355708 MsG0880044346.01.T01:intron 50.0%
! TGACTGTGGTGGGAAAACAG+TGG - Chr8:40355401-40355420 MsG0880044346.01.T01:intron 50.0%
! TGAGATGAGGTCTGCTGGTT+GGG - Chr8:40357545-40357564 MsG0880044346.01.T01:intron 50.0%
!! GCAGGGGAGCATCTTTAGTT+GGG + Chr8:40355992-40356011 None:intergenic 50.0%
!! TGCAGGGGAGCATCTTTAGT+TGG + Chr8:40355993-40356012 None:intergenic 50.0%
ACAATTGCTCCCTCCGGTGA+AGG + Chr8:40357240-40357259 None:intergenic 55.0%
ACATGTCTGGTGTCCGCTGT+CGG - Chr8:40355106-40355125 MsG0880044346.01.T01:intron 55.0%
CCCCAAAAGCTATGTCACCC+AGG - Chr8:40355272-40355291 MsG0880044346.01.T01:intron 55.0%
GAAGGGCTCAGGGAATCCTA+AGG - Chr8:40355854-40355873 MsG0880044346.01.T01:intron 55.0%
GCTGCAACAATTGCTCCCTC+CGG + Chr8:40357246-40357265 None:intergenic 55.0%
TCCGCTGTCGGAAAACACCT+GGG - Chr8:40355118-40355137 MsG0880044346.01.T01:intron 55.0%
TCCGTACAGTACTGTGCGCA+AGG + Chr8:40354413-40354432 None:intergenic 55.0%
! ACCCAGGTGTTTTCCGACAG+CGG + Chr8:40355122-40355141 None:intergenic 55.0%
! CTCTTGTGATGGGATGCCTC+AGG - Chr8:40355688-40355707 MsG0880044346.01.T01:intron 55.0%
! CTTGTGATGGGATGCCTCAG+GGG - Chr8:40355690-40355709 MsG0880044346.01.T01:intron 55.0%
ACCGGACACGGATAGCACCT+GGG + Chr8:40355292-40355311 None:intergenic 60.0%
GTCCGCTGTCGGAAAACACC+TGG - Chr8:40355117-40355136 MsG0880044346.01.T01:intron 60.0%
TACCGGACACGGATAGCACC+TGG + Chr8:40355293-40355312 None:intergenic 60.0%
! ACCCAGGTGCTATCCGTGTC+CGG - Chr8:40355288-40355307 MsG0880044346.01.T01:intron 60.0%
Chromosome Type Strat End Strand Name
Chr8 gene 40353326 40358620 40353326 ID=MsG0880044346.01;Name=MsG0880044346.01
Chr8 mRNA 40353326 40358620 40353326 ID=MsG0880044346.01.T01;Parent=MsG0880044346.01;Name=MsG0880044346.01.T01;_AED=0.32;_eAED=0.32;_QI=214|1|1|1|0|0.33|3|394|453
Chr8 exon 40353326 40355081 40353326 ID=MsG0880044346.01.T01:exon:17026;Parent=MsG0880044346.01.T01
Chr8 exon 40358035 40358095 40358035 ID=MsG0880044346.01.T01:exon:17025;Parent=MsG0880044346.01.T01
Chr8 exon 40358468 40358620 40358468 ID=MsG0880044346.01.T01:exon:17024;Parent=MsG0880044346.01.T01
Chr8 five_prime_UTR 40358468 40358620 40358468 ID=MsG0880044346.01.T01:five_prime_utr;Parent=MsG0880044346.01.T01
Chr8 five_prime_UTR 40358035 40358095 40358035 ID=MsG0880044346.01.T01:five_prime_utr;Parent=MsG0880044346.01.T01
Chr8 CDS 40353720 40355081 40353720 ID=MsG0880044346.01.T01:cds;Parent=MsG0880044346.01.T01
Chr8 three_prime_UTR 40353326 40353719 40353326 ID=MsG0880044346.01.T01:three_prime_utr;Parent=MsG0880044346.01.T01
Gene Sequence

>MsG0880044346.01.T01

ATGGATTCTGTGAAGCATTCAGCAGTGACACCACACAAGAGTAAACTAGCTCGCACTTTATCGAAGATTCTTCGTGTAAAATCAATGACTGGAGTTGCACAAGTTGATGGACTGAAGAATGTTAAAGTTGATGTTAATCTCAACCATGAAGAAGAAGATGAAGAGCTTAAGAAAAAAGTGGTCACAGAAGCTTTGCTTTCAAAAGTTTTTGCGAGCATTTCAACTATAAAAGCTTCATATGCTCAGCTACAACATGCTGAATCCCCTTATGACCGTGATGGAATTCAGGATGCTGATAAATTAATAATCTCGGAATTGAAGACCTTAGCTGAGTTAAAGCAATGTTGGTTCAAAAAACAATTCAATTTCGATCCTTCACCGGAGGGAGCAATTGTTGCAGCCGAATTAAAGGAGCTGAAGAGTAATATAATAACCCATAAAATCGTTGGGAAGAAGTTAGAATCGAAGTCGCTTCTTAAGGATTCTGAGATAATGTTTCTTAAAGAGAAGTTAGAGGAGGCAAATAAACAGAACAAGTTAATTGAAAGGAGGTTAAATCAAAGTGGTTCATTATCATCTCTTGATAATCTACACATCTCAGGACTAAGTCCTACACATTTTATATCTGCTCTTCGCCATGCGGTTAAATCAATTCGAAGCTTTGTGAAGTTGTTGGTTTATGAGATGAGGTCTGCTGGTTGGGATATTGATGCATCTGTGAATGCTATTGTTAAAGAAAATGTTGTTTATAGGAAAGAAGATCACAAGTGTTTTGCAATTGAGTCTTTTGTTTGTAGGGAAATGTTTGACTCTTTCAACCTCCCTTATTTCGATAATCACAATGATTTTCTTCCTGATAAAAACAAAACACAATTTTTCTTTGGGAGGTTCAATGAGTTAAAATCAGTGAATGCAAAGGAGTTTCTTGCTTTGAAACCAAAATCACCTTTTGCCATCTTTTGTTGGGTGAAATACTTGAGACTAGTTCACTCCAAAATGGAGGCATCATTCTTTGGTGACATGAAACAAAGGAATGTTGGAGAATTTCCCGATGACAACAACTTGTTCACTTCATTTGCTGAAATGGCTAAGAGGGTATGGCTTTTGCATTGCTTAGCATTTTCTTTTGAACCTCAAGCTGAAATATTTCAAATAGGGAAAGGTTGCAGATTCTCTGATGTATACATGGAGAGTGTTGTAAATGATGATGAAGTAGCACAAGCAGATGAACTTGAGCAACAAGTTGCTTTCACTGTAGTTCCAGGTTTTAAGATTGGTAAAACTGTTTTACAGTGTCAAGTTTACCTCTCACAGTTATCACAGCCACAAGCTCAAGTGAAAAGAAAAATGTCACTTCCATGA

Protein sequence

>MsG0880044346.01.T01

MDSVKHSAVTPHKSKLARTLSKILRVKSMTGVAQVDGLKNVKVDVNLNHEEEDEELKKKVVTEALLSKVFASISTIKASYAQLQHAESPYDRDGIQDADKLIISELKTLAELKQCWFKKQFNFDPSPEGAIVAAELKELKSNIITHKIVGKKLESKSLLKDSEIMFLKEKLEEANKQNKLIERRLNQSGSLSSLDNLHISGLSPTHFISALRHAVKSIRSFVKLLVYEMRSAGWDIDASVNAIVKENVVYRKEDHKCFAIESFVCREMFDSFNLPYFDNHNDFLPDKNKTQFFFGRFNELKSVNAKEFLALKPKSPFAIFCWVKYLRLVHSKMEASFFGDMKQRNVGEFPDDNNLFTSFAEMAKRVWLLHCLAFSFEPQAEIFQIGKGCRFSDVYMESVVNDDEVAQADELEQQVAFTVVPGFKIGKTVLQCQVYLSQLSQPQAQVKRKMSLP*