AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880042743.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880042743.01.T01 MTR_8g020880 97.271 733 12 5 1 732 1 726 0.0 1463
MsG0880042743.01.T01 MTR_8g020880 96.830 631 12 5 1 630 1 624 0.0 1251
MsG0880042743.01.T01 MTR_7g108940 35.680 412 218 10 227 593 146 555 1.04e-62 224
MsG0880042743.01.T01 MTR_7g108940 35.680 412 218 10 227 593 146 555 2.31e-62 224
MsG0880042743.01.T01 MTR_5g007870 43.541 209 106 3 221 417 121 329 1.59e-37 150
MsG0880042743.01.T01 MTR_5g007870 50.394 127 54 2 443 560 446 572 2.23e-28 122
MsG0880042743.01.T01 MTR_4g123930 29.787 329 200 6 248 552 112 433 2.34e-34 137
MsG0880042743.01.T01 MTR_4g123930 29.846 325 197 6 252 552 116 433 2.06e-33 136
MsG0880042743.01.T01 MTR_4g123930 29.450 309 187 6 268 552 2 303 4.64e-32 127
MsG0880042743.01.T01 MTR_4g123930 29.450 309 187 6 268 552 2 303 1.81e-30 125
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880042743.01.T01 AT3G14050 67.121 733 198 9 1 721 2 703 0.0 906
MsG0880042743.01.T01 AT1G54130 64.495 752 204 14 1 730 2 712 0.0 891
MsG0880042743.01.T01 AT4G02260 39.316 351 188 7 227 552 148 498 2.87e-60 218
MsG0880042743.01.T01 AT4G02260 39.316 351 188 7 227 552 148 498 6.27e-60 218
MsG0880042743.01.T01 AT4G02260 39.316 351 188 7 227 552 148 498 6.74e-60 218
MsG0880042743.01.T01 AT4G02260 39.205 352 188 8 227 552 148 499 2.33e-58 213
MsG0880042743.01.T01 AT3G17470 31.212 330 198 7 246 552 107 430 4.20e-37 145
MsG0880042743.01.T01 AT3G17470 31.212 330 198 7 246 552 122 445 4.27e-36 144
MsG0880042743.01.T01 AT3G17470 31.212 330 198 7 246 552 107 430 4.52e-36 144

Find 185 sgRNAs with CRISPR-Local

Find 269 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCCATCTTCAACTTGCAATT+TGG 0.118666 8:+13412263 None:intergenic
TTGTAAATTCATCTCTTCTT+AGG 0.139163 8:-13415830 MsG0880042743.01.T01:five_prime_UTR
ATTAACTATGATTTCGAATT+AGG 0.147309 8:-13415531 MsG0880042743.01.T01:CDS
GATGATATCCATGACATTTA+TGG 0.178626 8:-13413303 MsG0880042743.01.T01:CDS
CTTACTTATGATTATATATA+CGG 0.188737 8:-13414651 MsG0880042743.01.T01:CDS
GATGGTGTTGGTGGTGATTC+TGG 0.210059 8:-13415069 MsG0880042743.01.T01:CDS
ATGCATTTGCAAGCAGAATT+TGG 0.213922 8:-13413005 MsG0880042743.01.T01:CDS
TGCTTTGGGTTCTTCTTGTT+TGG 0.222221 8:-13415145 MsG0880042743.01.T01:CDS
TTGTGAAGAGTTTGTTATTA+AGG 0.223595 8:-13414926 MsG0880042743.01.T01:CDS
ATTTCTTATCATGTCATTTC+TGG 0.239861 8:-13413593 MsG0880042743.01.T01:CDS
TCGAGTTTGCACAAAATTCT+TGG 0.262479 8:+13412399 None:intergenic
TTGCAATTTGGATCACTTAC+AGG 0.265645 8:+13412275 None:intergenic
CTGAATTTCTTCCCTATATT+CGG 0.288112 8:+13412196 None:intergenic
GCGACGGCGGCGTCTACGTC+TGG 0.303823 8:-13415480 MsG0880042743.01.T01:CDS
CTCGACAGTACTAGATTTGT+TGG 0.308633 8:-13412381 MsG0880042743.01.T01:CDS
TAGAAGTTGTTCACCGGTTA+TGG 0.315278 8:-13413236 MsG0880042743.01.T01:CDS
CAATCAGGCTTGTAAGAATA+TGG 0.320693 8:+13412795 None:intergenic
TCCGTATTTGCAGCATTGTT+TGG 0.330409 8:-13414760 MsG0880042743.01.T01:CDS
GATTATATATACGGGATGTT+TGG 0.331195 8:-13414642 MsG0880042743.01.T01:CDS
ACCGATTAGGAATAGCTAAT+TGG 0.332077 8:-13413760 MsG0880042743.01.T01:CDS
AAGAGCTGTCCTCATTAAAT+TGG 0.336185 8:-13413882 MsG0880042743.01.T01:CDS
CGACGAAGTTTGGTGGATCT+TGG 0.336434 8:-13415308 MsG0880042743.01.T01:CDS
TCCAATTAGCTATTCCTAAT+CGG 0.340721 8:+13413759 None:intergenic
GCACCTTTGGCCAACCGATT+AGG 0.347291 8:-13413773 MsG0880042743.01.T01:CDS
ACAAGTATCTGACCGAATAT+AGG 0.349388 8:-13412208 MsG0880042743.01.T01:CDS
TGTAAATTCATCTCTTCTTA+GGG 0.349575 8:-13415829 MsG0880042743.01.T01:five_prime_UTR
TTTGGAAACTGCTGTGTTGT+TGG 0.368793 8:-13414742 MsG0880042743.01.T01:CDS
GGTGGTGGTGGTGAATTTGA+TGG 0.370524 8:-13415087 MsG0880042743.01.T01:CDS
CAAAATATAACTTAAATAAC+TGG 0.370941 8:+13411946 None:intergenic
ATGATATCCATGACATTTAT+GGG 0.372392 8:-13413302 MsG0880042743.01.T01:CDS
TGGGTTTGTGAGAAGTGCTT+TGG 0.378293 8:-13415160 MsG0880042743.01.T01:CDS
ATCAACAACTTCTTAGCATA+AGG 0.384347 8:+13414976 None:intergenic
GAGAGATCATAGTCCAGTTT+CGG 0.385330 8:-13415283 MsG0880042743.01.T01:CDS
GAAAGCTCTTTGTGCTGTAC+AGG 0.386440 8:+13413698 None:intergenic
ATTCTTACAAGCCTGATTGC+GGG 0.405333 8:-13412791 MsG0880042743.01.T01:CDS
TAACCGGTGAACAACTTCTA+AGG 0.405585 8:+13413239 None:intergenic
CTTTGCAAACCTCTGCTGCT+TGG 0.408434 8:+13413814 None:intergenic
TTGTTCGAATTTGTACTTCA+AGG 0.408493 8:+13413033 None:intergenic
CCTCCCTGATCGAATTGTTC+CGG 0.409534 8:+13415209 None:intergenic
GGTCCATCCTGCCCGCAATC+AGG 0.410211 8:+13412780 None:intergenic
GATGACACTAGATGCATTAC+CGG 0.413123 8:-13413840 MsG0880042743.01.T01:CDS
GGCGTCTACGTCTGGGAAAT+CGG 0.414943 8:-13415472 MsG0880042743.01.T01:CDS
GGTGGTGAATTTGATGGTGT+TGG 0.416217 8:-13415081 MsG0880042743.01.T01:CDS
GGGTTTGTGAGAAGTGCTTT+GGG 0.417938 8:-13415159 MsG0880042743.01.T01:CDS
GGAGTTGCTGATTTAGTTGA+AGG 0.421830 8:-13414615 MsG0880042743.01.T01:CDS
TCCAAACAATGCTGCAAATA+CGG 0.422488 8:+13414759 None:intergenic
CAAGTATCTGACCGAATATA+GGG 0.424375 8:-13412207 MsG0880042743.01.T01:CDS
GAGGTTTGCAAAGGAAACTT+TGG 0.428632 8:-13413804 MsG0880042743.01.T01:CDS
AACCTCTGCTGCTTGGCAAC+CGG 0.433003 8:+13413821 None:intergenic
AATGATTGATTTATGTAGTT+GGG 0.435766 8:-13411969 MsG0880042743.01.T01:three_prime_UTR
ATGGGTGCCGGTGCGGGTAC+CGG 0.442415 8:-13415228 MsG0880042743.01.T01:CDS
ATCTCTGCACACTGTGGTGA+TGG 0.443111 8:-13413072 MsG0880042743.01.T01:CDS
AGTAAAGATTCCACTTCTGT+TGG 0.443308 8:-13412873 MsG0880042743.01.T01:CDS
TGTTTGGATTATGATTCTAC+TGG 0.445310 8:-13415129 MsG0880042743.01.T01:CDS
AATTTGGATTCGCTGCTCAT+TGG 0.445751 8:-13412989 MsG0880042743.01.T01:CDS
TCCAAATTGCAAGTTGAAGA+TGG 0.447857 8:-13412264 MsG0880042743.01.T01:CDS
CATGCACCTCAGACCATAAC+CGG 0.449375 8:+13413223 None:intergenic
ACAGGCTTGTGATTCAGTCT+TGG 0.449925 8:+13412293 None:intergenic
TACAACATACCCATTGAACT+TGG 0.450219 8:+13413173 None:intergenic
ATGCTACTACTACACGAAAC+AGG 0.451567 8:+13415249 None:intergenic
AATTCAACAGTAGTTGCTGC+TGG 0.454268 8:-13414705 MsG0880042743.01.T01:CDS
ATACATTGCCCCAAGTTCAA+TGG 0.454579 8:-13413183 MsG0880042743.01.T01:CDS
ACTCATTGCTTCGCACTGCC+AGG 0.456952 8:+13412893 None:intergenic
TAGATTTGTTGGAGAGGGTC+GGG 0.457657 8:-13412370 MsG0880042743.01.T01:CDS
TGGTGGTGATTCTGGAATTG+TGG 0.457934 8:-13415061 MsG0880042743.01.T01:CDS
ATCTTCGTCACCGGCGTCTA+CGG 0.466938 8:-13415502 MsG0880042743.01.T01:CDS
TTGGATTCGCTGCTCATTGG+AGG 0.470246 8:-13412986 MsG0880042743.01.T01:CDS
AGTAGCATGGGTGCCGGTGC+GGG 0.474221 8:-13415234 MsG0880042743.01.T01:CDS
TACGTCTGGGAAATCGGTGA+TGG 0.474358 8:-13415466 MsG0880042743.01.T01:CDS
TACATTGCCCCAAGTTCAAT+GGG 0.477235 8:-13413182 MsG0880042743.01.T01:intron
GCTGTGTTGTTGGCTTTGAT+CGG 0.482957 8:-13414732 MsG0880042743.01.T01:CDS
GCCTCAATTCTTCCTTCAGA+GGG 0.483136 8:+13412315 None:intergenic
CGATCAGGGAGGGGAAGTAC+TGG 0.484040 8:-13415198 MsG0880042743.01.T01:CDS
GAATGATTGATTTATGTAGT+TGG 0.484156 8:-13411970 MsG0880042743.01.T01:three_prime_UTR
GGTACCGGAACAATTCGATC+AGG 0.485761 8:-13415213 MsG0880042743.01.T01:CDS
TGTTCGAATTTGTACTTCAA+GGG 0.486391 8:+13413034 None:intergenic
GCTGCGCTTGATTGTTGATA+AGG 0.487554 8:-13413280 MsG0880042743.01.T01:CDS
AGCTTTCTCAGCTTCACAAA+AGG 0.487843 8:+13414903 None:intergenic
AGATTACGCGGTGGTGGTGG+TGG 0.491666 8:-13415102 MsG0880042743.01.T01:CDS
GGGAGGGGAAGTACTGGTGG+TGG 0.494745 8:-13415192 MsG0880042743.01.T01:CDS
GGGCTCGATGGGTTGTCACC+TGG 0.495606 8:-13412911 MsG0880042743.01.T01:CDS
AGAGAGAAGCACGCAAGAGA+TGG 0.503862 8:+13415903 None:intergenic
GTTAGATTACGCGGTGGTGG+TGG 0.504725 8:-13415105 MsG0880042743.01.T01:CDS
AGATACTTGTCAGGTATGGC+TGG 0.505901 8:+13412221 None:intergenic
AGAGCTTTCGTCAAAGCTTG+TGG 0.510991 8:-13413684 MsG0880042743.01.T01:CDS
TTACTTATGATTATATATAC+GGG 0.511289 8:-13414650 MsG0880042743.01.T01:CDS
TTACGCGGTGGTGGTGGTGG+TGG 0.511301 8:-13415099 MsG0880042743.01.T01:CDS
TATTCGGTCAGATACTTGTC+AGG 0.512446 8:+13412212 None:intergenic
ATCTTCATCACCACCACCAC+CGG 0.515186 8:+13415374 None:intergenic
CGCTGCTCATTGGAGGTACA+AGG 0.516170 8:-13412979 MsG0880042743.01.T01:CDS
TTCTTCATATGTGCTTCAGA+TGG 0.516537 8:-13412940 MsG0880042743.01.T01:CDS
GGTGAATTTGATGGTGTTGG+TGG 0.516562 8:-13415078 MsG0880042743.01.T01:CDS
CGGTTATGGTCTGAGGTGCA+TGG 0.519568 8:-13413222 MsG0880042743.01.T01:CDS
CTAGATTTGTTGGAGAGGGT+CGG 0.525008 8:-13412371 MsG0880042743.01.T01:CDS
TTACAAGCCTGATTGCGGGC+AGG 0.526518 8:-13412787 MsG0880042743.01.T01:CDS
GGAGGGGAAGTACTGGTGGT+GGG 0.527525 8:-13415191 MsG0880042743.01.T01:CDS
GGCCTCAATTCTTCCTTCAG+AGG 0.533475 8:+13412314 None:intergenic
TGAGAAAGCTCATAGAGGAC+AGG 0.534366 8:-13414890 MsG0880042743.01.T01:intron
TGGTGATGAAGATGAATTGA+AGG 0.535373 8:-13415364 MsG0880042743.01.T01:CDS
ACAACATACCCATTGAACTT+GGG 0.535483 8:+13413174 None:intergenic
GTCACCGGCGTCTACGGCGA+CGG 0.537490 8:-13415496 MsG0880042743.01.T01:CDS
AGATGGTTGAGTGGGCTCGA+TGG 0.537950 8:-13412923 MsG0880042743.01.T01:CDS
GCTGTGACTAAATCAAATGT+TGG 0.538779 8:+13412068 None:intergenic
GATGGTTGAGTGGGCTCGAT+GGG 0.540134 8:-13412922 MsG0880042743.01.T01:CDS
CGGGCTAACTGTATCAAGCA+TGG 0.545579 8:-13412159 MsG0880042743.01.T01:CDS
AACATATAGGTTCCCTCTGA+AGG 0.546405 8:-13412327 MsG0880042743.01.T01:CDS
GACAGTTATCAGCATGAGAA+GGG 0.546477 8:+13412817 None:intergenic
TGTTTCGTGTAGTAGTAGCA+TGG 0.546500 8:-13415247 MsG0880042743.01.T01:CDS
ATCGACAAATCCAACAGAAG+TGG 0.547140 8:+13412863 None:intergenic
ATATACGGGATGTTTGGAGC+TGG 0.549390 8:-13414636 MsG0880042743.01.T01:CDS
CCAAATTGCAAGTTGAAGAT+GGG 0.550752 8:-13412263 MsG0880042743.01.T01:CDS
AATTGTTCCGGTACCCGCAC+CGG 0.551906 8:+13415221 None:intergenic
ATTAGCTATTCCTAATCGGT+TGG 0.552553 8:+13413763 None:intergenic
CTCTTGCATCTGCCATTGCA+AGG 0.553256 8:+13413900 None:intergenic
TTGCAAGGAACATTGTATGC+AGG 0.553528 8:+13413915 None:intergenic
GAGCAAGCACTCAAAGATGA+AGG 0.553848 8:-13413617 MsG0880042743.01.T01:CDS
GCATACAATGTTCCTTGCAA+TGG 0.556040 8:-13413912 MsG0880042743.01.T01:CDS
ACGTCTGGGAAATCGGTGAT+GGG 0.557642 8:-13415465 MsG0880042743.01.T01:CDS
ATTCAACAGTAGTTGCTGCT+GGG 0.558656 8:-13414704 MsG0880042743.01.T01:CDS
TAGTAGCATGGGTGCCGGTG+CGG 0.559495 8:-13415235 MsG0880042743.01.T01:CDS
AAGCCTGATTGCGGGCAGGA+TGG 0.560710 8:-13412783 MsG0880042743.01.T01:CDS
TATTCTTACAAGCCTGATTG+CGG 0.560842 8:-13412792 MsG0880042743.01.T01:CDS
GCTACTGCAAGCAGCATGGT+TGG 0.562551 8:-13412128 MsG0880042743.01.T01:CDS
GGTCAGATACTTGTCAGGTA+TGG 0.563602 8:+13412217 None:intergenic
AGCGCAGCCCATAAATGTCA+TGG 0.564123 8:+13413295 None:intergenic
TACCGGTTGCCAAGCAGCAG+AGG 0.564469 8:-13413823 MsG0880042743.01.T01:CDS
GGAACAATTCGATCAGGGAG+GGG 0.565296 8:-13415207 MsG0880042743.01.T01:CDS
CGACGGCGGCGTCTACGTCT+GGG 0.569402 8:-13415479 MsG0880042743.01.T01:CDS
CTTATCATGTCATTTCTGGA+CGG 0.571086 8:-13413589 MsG0880042743.01.T01:CDS
CAACATACCCATTGAACTTG+GGG 0.571860 8:+13413175 None:intergenic
GGACAGTTATCAGCATGAGA+AGG 0.573734 8:+13412816 None:intergenic
GCTGTAGGTTGACAACATAT+AGG 0.573805 8:-13412340 MsG0880042743.01.T01:CDS
TGTTCACCGGTTATGGTCTG+AGG 0.575398 8:-13413229 MsG0880042743.01.T01:CDS
GAGTTGCTGATTTAGTTGAA+GGG 0.580287 8:-13414614 MsG0880042743.01.T01:CDS
TCTCTGCACACTGTGGTGAT+GGG 0.580339 8:-13413071 MsG0880042743.01.T01:CDS
ATCGATCAGCCAATTTAATG+AGG 0.581475 8:+13413873 None:intergenic
GTTTCGTGTAGTAGTAGCAT+GGG 0.582976 8:-13415246 MsG0880042743.01.T01:CDS
AAGCCTTAGAAGTTGTTCAC+CGG 0.583932 8:-13413242 MsG0880042743.01.T01:CDS
GGGTCGGGCGAGCAAGCTGT+AGG 0.584040 8:-13412355 MsG0880042743.01.T01:CDS
ACTGAGTCACTTAAGCAAGC+TGG 0.586111 8:-13413981 MsG0880042743.01.T01:CDS
AGTACTAGATTTGTTGGAGA+GGG 0.591903 8:-13412375 MsG0880042743.01.T01:CDS
CGGAACAATTCGATCAGGGA+GGG 0.592758 8:-13415208 MsG0880042743.01.T01:CDS
GGTTATGGTCTGAGGTGCAT+GGG 0.593196 8:-13413221 MsG0880042743.01.T01:CDS
CACACTGTGGTGATGGGTGA+AGG 0.596315 8:-13413065 MsG0880042743.01.T01:CDS
AAAGCTCTTTGTGCTGTACA+GGG 0.599815 8:+13413699 None:intergenic
GGTGTAGAACACACACTACT+CGG 0.601489 8:+13415561 None:intergenic
ATTAGGAATAGCTAATTGGA+AGG 0.601826 8:-13413756 MsG0880042743.01.T01:CDS
TTCAGCGAATGTATGATCGC+GGG 0.602849 8:-13412178 MsG0880042743.01.T01:CDS
GCGCTTGATTGTTGATAAGG+AGG 0.603331 8:-13413277 MsG0880042743.01.T01:CDS
TGTAGTAGTAGCATGGGTGC+CGG 0.604049 8:-13415240 MsG0880042743.01.T01:CDS
GTTCGAATTTGTACTTCAAG+GGG 0.605083 8:+13413035 None:intergenic
ATTCCTAATCGGTTGGCCAA+AGG 0.606063 8:+13413770 None:intergenic
CAAGCAGCAGAGGTTTGCAA+AGG 0.607809 8:-13413813 MsG0880042743.01.T01:CDS
GCATGAGAAGGGAACTTGCA+AGG 0.608349 8:+13412828 None:intergenic
TCAGGGAGGGGAAGTACTGG+TGG 0.609082 8:-13415195 MsG0880042743.01.T01:CDS
TGTGCTTCAGATGGTTGAGT+GGG 0.610056 8:-13412931 MsG0880042743.01.T01:CDS
ATGTGCTTCAGATGGTTGAG+TGG 0.615998 8:-13412932 MsG0880042743.01.T01:CDS
AGGATCTAGATCTTCGTCAC+CGG 0.616184 8:-13415511 MsG0880042743.01.T01:CDS
GGGCTAACTGTATCAAGCAT+GGG 0.621683 8:-13412158 MsG0880042743.01.T01:CDS
TGTGGTGATGGGTGAAGGCA+AGG 0.624487 8:-13413060 MsG0880042743.01.T01:CDS
TACTGCTACTGCAAGCAGCA+TGG 0.624524 8:-13412132 MsG0880042743.01.T01:CDS
GGTGTTAGATTACGCGGTGG+TGG 0.624885 8:-13415108 MsG0880042743.01.T01:CDS
GCCGCCGTCGCCGTAGACGC+CGG 0.625619 8:+13415492 None:intergenic
AAATCATAGTTAATCTGATG+CGG 0.628203 8:+13415540 None:intergenic
TCCCTCTGAAGGAAGAATTG+AGG 0.628438 8:-13412316 MsG0880042743.01.T01:CDS
CAAGATCCACCAAACTTCGT+CGG 0.628498 8:+13415309 None:intergenic
TCTGGGAAATCGGTGATGGG+TGG 0.638476 8:-13415462 MsG0880042743.01.T01:CDS
CAGTACTAGATTTGTTGGAG+AGG 0.642485 8:-13412376 MsG0880042743.01.T01:CDS
TGTTTGTAGATGCGAGCTAG+TGG 0.645770 8:-13414786 MsG0880042743.01.T01:intron
GAAGCTGAGAAAGCTCATAG+AGG 0.646306 8:-13414895 MsG0880042743.01.T01:CDS
TCTACTGGTGTTAGATTACG+CGG 0.646568 8:-13415114 MsG0880042743.01.T01:CDS
AGTTGCTGATTTAGTTGAAG+GGG 0.648111 8:-13414613 MsG0880042743.01.T01:intron
ACCGGCGTCTACGGCGACGG+CGG 0.651192 8:-13415493 MsG0880042743.01.T01:CDS
ACATGCTGCTTCACCACCGT+CGG 0.651198 8:+13415417 None:intergenic
TCAATCATGATAACAAACAC+AGG 0.655763 8:+13412759 None:intergenic
CAAGGAACATTGTATGCAGG+CGG 0.659437 8:+13413918 None:intergenic
GTACCGGAACAATTCGATCA+GGG 0.659700 8:-13415212 MsG0880042743.01.T01:CDS
ATTCAGCGAATGTATGATCG+CGG 0.666404 8:-13412179 MsG0880042743.01.T01:CDS
ATATACAAATGAATGTGCCG+AGG 0.677700 8:+13415794 None:intergenic
CCGGAACAATTCGATCAGGG+AGG 0.701868 8:-13415209 MsG0880042743.01.T01:CDS
TATCATGATTGAGAATGACA+AGG 0.707357 8:-13412748 MsG0880042743.01.T01:intron
GTAGAACACACACTACTCGG+TGG 0.713186 8:+13415564 None:intergenic
ACTGGTGTTAGATTACGCGG+TGG 0.729692 8:-13415111 MsG0880042743.01.T01:CDS
TGAGAAGGGAACTTGCAAGG+TGG 0.737719 8:+13412831 None:intergenic
TTATCAATCTCTGCACACTG+TGG 0.751179 8:-13413078 MsG0880042743.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CAAAATATAACTTAAATAAC+TGG + Chr8:13415951-13415970 None:intergenic 15.0%
!! CTTACTTATGATTATATATA+CGG - Chr8:13413243-13413262 MsG0880042743.01.T01:CDS 15.0%
!! TTACTTATGATTATATATAC+GGG - Chr8:13413244-13413263 MsG0880042743.01.T01:CDS 15.0%
!!! AGAATTATGTTCAATATTTT+GGG - Chr8:13415177-13415196 MsG0880042743.01.T01:CDS 15.0%
!!! TAGAATTATGTTCAATATTT+TGG - Chr8:13415176-13415195 MsG0880042743.01.T01:CDS 15.0%
!! AAGAGATGAATTTACAAAAA+AGG + Chr8:13412061-13412080 None:intergenic 20.0%
!! AGAGATGAATTTACAAAAAA+GGG + Chr8:13412060-13412079 None:intergenic 20.0%
!! ATAAATAATGAAATGAAAGC+AGG + Chr8:13415228-13415247 None:intergenic 20.0%
!! ATTAACTATGATTTCGAATT+AGG - Chr8:13412363-13412382 MsG0880042743.01.T01:CDS 20.0%
!!! AATGATTGATTTATGTAGTT+GGG - Chr8:13415925-13415944 MsG0880042743.01.T01:five_prime_UTR 20.0%
!!! TGTTTTTTAATTTTGTACAG+AGG + Chr8:13412187-13412206 None:intergenic 20.0%
!!! TTCTTCTTCTTTTTCAATTT+GGG + Chr8:13412260-13412279 None:intergenic 20.0%
!!! TTTAAGATTAAGATGATTGA+TGG - Chr8:13413344-13413363 MsG0880042743.01.T01:intron 20.0%
! AAACAGGAAACTGTTAAATT+AGG - Chr8:13415326-13415345 MsG0880042743.01.T01:CDS 25.0%
! AAATCATAGTTAATCTGATG+CGG + Chr8:13412357-13412376 None:intergenic 25.0%
! AACAGGAAACTGTTAAATTA+GGG - Chr8:13415327-13415346 MsG0880042743.01.T01:CDS 25.0%
! AATGACAATTCAAATCCATT+AGG - Chr8:13413596-13413615 MsG0880042743.01.T01:CDS 25.0%
! AATTTACAAAAAAGGGATTC+TGG + Chr8:13412053-13412072 None:intergenic 25.0%
! ATGATATCCATGACATTTAT+GGG - Chr8:13414592-13414611 MsG0880042743.01.T01:intron 25.0%
! CAAATCTATCATAAAAAGCT+AGG + Chr8:13413644-13413663 None:intergenic 25.0%
! CAACCACAATACAAATTAAT+CGG + Chr8:13413772-13413791 None:intergenic 25.0%
! GAAAACAAGTGTTAAAACAA+AGG + Chr8:13415269-13415288 None:intergenic 25.0%
! TAAATCAGATGATATAGAGA+CGG + Chr8:13414779-13414798 None:intergenic 25.0%
! TAATAACTACAAACATCAAG+AGG + Chr8:13413564-13413583 None:intergenic 25.0%
! TGTAAATTCATCTCTTCTTA+GGG - Chr8:13412065-13412084 MsG0880042743.01.T01:three_prime_UTR 25.0%
! TTGTAAATTCATCTCTTCTT+AGG - Chr8:13412064-13412083 MsG0880042743.01.T01:three_prime_UTR 25.0%
! TTGTACAGATATTTGAAAAC+AGG - Chr8:13415310-13415329 MsG0880042743.01.T01:CDS 25.0%
!! ATTTCTTATCATGTCATTTC+TGG - Chr8:13414301-13414320 MsG0880042743.01.T01:intron 25.0%
!! GAATGATTGATTTATGTAGT+TGG - Chr8:13415924-13415943 MsG0880042743.01.T01:five_prime_UTR 25.0%
!! TAATTTGGATGATACTTTTG+TGG - Chr8:13412869-13412888 MsG0880042743.01.T01:CDS 25.0%
!! TTATGTGTGTTTGTGATTTT+TGG - Chr8:13413044-13413063 MsG0880042743.01.T01:CDS 25.0%
!! TTTGAAGTGTGCAAATAATA+TGG + Chr8:13414522-13414541 None:intergenic 25.0%
!! TTTTTGTATTGCTAGTGATT+TGG - Chr8:13413717-13413736 MsG0880042743.01.T01:CDS 25.0%
!!! AAACCGATTAATTTGTATTG+TGG - Chr8:13413766-13413785 MsG0880042743.01.T01:CDS 25.0%
!!! ATTTTTGAAGAACAAGCAAA+AGG + Chr8:13415803-13415822 None:intergenic 25.0%
!!! CTTCTTCTTCTTTTTCAATT+TGG + Chr8:13412261-13412280 None:intergenic 25.0%
!!! CTTTTTCAATTTGGGAATTA+GGG + Chr8:13412252-13412271 None:intergenic 25.0%
!!! TCTTTTTCAATTTGGGAATT+AGG + Chr8:13412253-13412272 None:intergenic 25.0%
!!! TTCAATATTTTGGGTTTAGT+TGG - Chr8:13415186-13415205 MsG0880042743.01.T01:CDS 25.0%
!!! TTCGGTGTTAATCAATAATT+GGG - Chr8:13413316-13413335 MsG0880042743.01.T01:CDS 25.0%
!!! TTGTGAAGAGTTTGTTATTA+AGG - Chr8:13412968-13412987 MsG0880042743.01.T01:CDS 25.0%
!!! TTTCGGTGTTAATCAATAAT+TGG - Chr8:13413315-13413334 MsG0880042743.01.T01:CDS 25.0%
!!! TTTTTGAAGAACAAGCAAAA+GGG + Chr8:13415802-13415821 None:intergenic 25.0%
!!! TTTTTTATCTCAAACCAAAC+AGG - Chr8:13415381-13415400 MsG0880042743.01.T01:CDS 25.0%
AACATGCAATGCAAATCAAA+AGG + Chr8:13413378-13413397 None:intergenic 30.0%
ACAGGAAACTGTTAAATTAG+GGG - Chr8:13415328-13415347 MsG0880042743.01.T01:CDS 30.0%
AGCTTATTGCATAAACCTAA+TGG + Chr8:13413614-13413633 None:intergenic 30.0%
ATAATATGGTGCATAATGTC+AGG + Chr8:13414508-13414527 None:intergenic 30.0%
ATCAACAACTTCTTAGCATA+AGG + Chr8:13412921-13412940 None:intergenic 30.0%
ATTAGGAATAGCTAATTGGA+AGG - Chr8:13414138-13414157 MsG0880042743.01.T01:intron 30.0%
CTGAATTTCTTCCCTATATT+CGG + Chr8:13415701-13415720 None:intergenic 30.0%
GAAAAAGAAGAAGAAGAAGA+AGG - Chr8:13412265-13412284 MsG0880042743.01.T01:CDS 30.0%
GATGATATCCATGACATTTA+TGG - Chr8:13414591-13414610 MsG0880042743.01.T01:intron 30.0%
GATTATATATACGGGATGTT+TGG - Chr8:13413252-13413271 MsG0880042743.01.T01:CDS 30.0%
TATCATGATTGAGAATGACA+AGG - Chr8:13415146-13415165 MsG0880042743.01.T01:CDS 30.0%
TATGTTATGTGTTTGTCAAG+TGG - Chr8:13413673-13413692 MsG0880042743.01.T01:CDS 30.0%
TCAATCATGATAACAAACAC+AGG + Chr8:13415138-13415157 None:intergenic 30.0%
TCATTTGTCTACATATTTGC+AGG - Chr8:13414553-13414572 MsG0880042743.01.T01:intron 30.0%
TCCAATTAGCTATTCCTAAT+CGG + Chr8:13414138-13414157 None:intergenic 30.0%
TGTTCGAATTTGTACTTCAA+GGG + Chr8:13414863-13414882 None:intergenic 30.0%
TGTTTGGATTATGATTCTAC+TGG - Chr8:13412765-13412784 MsG0880042743.01.T01:CDS 30.0%
TTATACACTTCATGAAACCA+AGG + Chr8:13415407-13415426 None:intergenic 30.0%
TTGTTCGAATTTGTACTTCA+AGG + Chr8:13414864-13414883 None:intergenic 30.0%
!! CGATTAATTTGTATTGTGGT+TGG - Chr8:13413770-13413789 MsG0880042743.01.T01:CDS 30.0%
!! GGATGAGTTGACTTTTAATT+TGG - Chr8:13412854-13412873 MsG0880042743.01.T01:CDS 30.0%
!!! AAGAAGAAGGTTTTGGTTTA+TGG - Chr8:13412278-13412297 MsG0880042743.01.T01:CDS 30.0%
!!! AGTGATTTGGCTTTTTTGTA+TGG - Chr8:13413730-13413749 MsG0880042743.01.T01:CDS 30.0%
AAGAGCTGTCCTCATTAAAT+TGG - Chr8:13414012-13414031 MsG0880042743.01.T01:intron 35.0%
ACAACATACCCATTGAACTT+GGG + Chr8:13414723-13414742 None:intergenic 35.0%
ACAAGTATCTGACCGAATAT+AGG - Chr8:13415686-13415705 MsG0880042743.01.T01:five_prime_UTR 35.0%
ACCGATTAGGAATAGCTAAT+TGG - Chr8:13414134-13414153 MsG0880042743.01.T01:intron 35.0%
ACTATCATTCTGTCTGATTC+TGG - Chr8:13415456-13415475 MsG0880042743.01.T01:CDS 35.0%
AGTAAAGATTCCACTTCTGT+TGG - Chr8:13415021-13415040 MsG0880042743.01.T01:CDS 35.0%
ATATACAAATGAATGTGCCG+AGG + Chr8:13412103-13412122 None:intergenic 35.0%
ATCGATCAGCCAATTTAATG+AGG + Chr8:13414024-13414043 None:intergenic 35.0%
ATGCATTTGCAAGCAGAATT+TGG - Chr8:13414889-13414908 MsG0880042743.01.T01:intron 35.0%
ATTAGCTATTCCTAATCGGT+TGG + Chr8:13414134-13414153 None:intergenic 35.0%
CAAGTATCTGACCGAATATA+GGG - Chr8:13415687-13415706 MsG0880042743.01.T01:five_prime_UTR 35.0%
CAATCAGGCTTGTAAGAATA+TGG + Chr8:13415102-13415121 None:intergenic 35.0%
GCTGTGACTAAATCAAATGT+TGG + Chr8:13415829-13415848 None:intergenic 35.0%
GCTTCAAGAATCTAACTGAT+TGG - Chr8:13413869-13413888 MsG0880042743.01.T01:CDS 35.0%
GGTATGTTGTAGCTCAATAA+TGG - Chr8:13414733-13414752 MsG0880042743.01.T01:CDS 35.0%
GTTCGAATTTGTACTTCAAG+GGG + Chr8:13414862-13414881 None:intergenic 35.0%
TACAACATACCCATTGAACT+TGG + Chr8:13414724-13414743 None:intergenic 35.0%
TATTCTTACAAGCCTGATTG+CGG - Chr8:13415102-13415121 MsG0880042743.01.T01:CDS 35.0%
TCCAAACAATGCTGCAAATA+CGG + Chr8:13413138-13413157 None:intergenic 35.0%
TCGAGTTTGCACAAAATTCT+TGG + Chr8:13415498-13415517 None:intergenic 35.0%
TTACCTTTCCCTCTTTCATT+TGG - Chr8:13414373-13414392 MsG0880042743.01.T01:intron 35.0%
TTCTTCATATGTGCTTCAGA+TGG - Chr8:13414954-13414973 MsG0880042743.01.T01:CDS 35.0%
TTGCAATTTGGATCACTTAC+AGG + Chr8:13415622-13415641 None:intergenic 35.0%
! ATTGTGGTTGGCATTTTTGT+AGG - Chr8:13413782-13413801 MsG0880042743.01.T01:CDS 35.0%
! CCAAATTGCAAGTTGAAGAT+GGG - Chr8:13415631-13415650 MsG0880042743.01.T01:five_prime_UTR 35.0%
! CTTATCATGTCATTTCTGGA+CGG - Chr8:13414305-13414324 MsG0880042743.01.T01:intron 35.0%
! GAAGAAGAAGAAGAAGGTTT+TGG - Chr8:13412271-13412290 MsG0880042743.01.T01:CDS 35.0%
! GGGATTCTGGAAAAATATGA+AGG + Chr8:13412040-13412059 None:intergenic 35.0%
! TAGGGTTCTTTTCTTATCCT+CGG - Chr8:13412083-13412102 MsG0880042743.01.T01:three_prime_UTR 35.0%
! TCCAAATTGCAAGTTGAAGA+TGG - Chr8:13415630-13415649 MsG0880042743.01.T01:five_prime_UTR 35.0%
! TGGTGATGAAGATGAATTGA+AGG - Chr8:13412530-13412549 MsG0880042743.01.T01:intron 35.0%
! TTGGATGATACTTTTGTGGA+GGG - Chr8:13412873-13412892 MsG0880042743.01.T01:CDS 35.0%
! TTTGGAGATTTTTGCACCTT+TGG - Chr8:13414108-13414127 MsG0880042743.01.T01:intron 35.0%
! TTTGGATGATACTTTTGTGG+AGG - Chr8:13412872-13412891 MsG0880042743.01.T01:CDS 35.0%
!! ACTGATTGGTATGCTATTTC+AGG - Chr8:13413883-13413902 MsG0880042743.01.T01:CDS 35.0%
!! AGTACTAGATTTGTTGGAGA+GGG - Chr8:13415519-13415538 MsG0880042743.01.T01:CDS 35.0%
!! AGTTGCTGATTTAGTTGAAG+GGG - Chr8:13413281-13413300 MsG0880042743.01.T01:CDS 35.0%
!! CCTTTTACTTCGAGTTTTTC+CGG - Chr8:13412501-13412520 MsG0880042743.01.T01:intron 35.0%
!! GAGTTGCTGATTTAGTTGAA+GGG - Chr8:13413280-13413299 MsG0880042743.01.T01:CDS 35.0%
!!! AAGAAGGTTTTGGTTTATGG+CGG - Chr8:13412281-13412300 MsG0880042743.01.T01:CDS 35.0%
!!! AAGGGGTGAGGAATTTTTTT+CGG - Chr8:13413298-13413317 MsG0880042743.01.T01:CDS 35.0%
AAAGCTCTTTGTGCTGTACA+GGG + Chr8:13414198-13414217 None:intergenic 40.0%
AACATATAGGTTCCCTCTGA+AGG - Chr8:13415567-13415586 MsG0880042743.01.T01:CDS 40.0%
AAGCCTTAGAAGTTGTTCAC+CGG - Chr8:13414652-13414671 MsG0880042743.01.T01:CDS 40.0%
AATTCAACAGTAGTTGCTGC+TGG - Chr8:13413189-13413208 MsG0880042743.01.T01:CDS 40.0%
AATTTGGATTCGCTGCTCAT+TGG - Chr8:13414905-13414924 MsG0880042743.01.T01:CDS 40.0%
AGCTTTCTCAGCTTCACAAA+AGG + Chr8:13412994-13413013 None:intergenic 40.0%
AGTGACCATCCAAATGAAAG+AGG + Chr8:13414385-13414404 None:intergenic 40.0%
ATACATTGCCCCAAGTTCAA+TGG - Chr8:13414711-13414730 MsG0880042743.01.T01:CDS 40.0%
ATCGACAAATCCAACAGAAG+TGG + Chr8:13415034-13415053 None:intergenic 40.0%
ATGCTACTACTACACGAAAC+AGG + Chr8:13412648-13412667 None:intergenic 40.0%
ATGTCTTCCACCAATTGTTC+GGG - Chr8:13413483-13413502 MsG0880042743.01.T01:intron 40.0%
ATTCAACAGTAGTTGCTGCT+GGG - Chr8:13413190-13413209 MsG0880042743.01.T01:CDS 40.0%
ATTCAGCGAATGTATGATCG+CGG - Chr8:13415715-13415734 MsG0880042743.01.T01:five_prime_UTR 40.0%
ATTCTTACAAGCCTGATTGC+GGG - Chr8:13415103-13415122 MsG0880042743.01.T01:CDS 40.0%
CAACATACCCATTGAACTTG+GGG + Chr8:13414722-13414741 None:intergenic 40.0%
CATCCAAATGAAAGAGGGAA+AGG + Chr8:13414379-13414398 None:intergenic 40.0%
CCCATCTTCAACTTGCAATT+TGG + Chr8:13415634-13415653 None:intergenic 40.0%
CCGGAAAAACTCGAAGTAAA+AGG + Chr8:13412504-13412523 None:intergenic 40.0%
CTCGACAGTACTAGATTTGT+TGG - Chr8:13415513-13415532 MsG0880042743.01.T01:CDS 40.0%
CTTTCCCTCTTTCATTTGGA+TGG - Chr8:13414377-13414396 MsG0880042743.01.T01:intron 40.0%
GACAGTTATCAGCATGAGAA+GGG + Chr8:13415080-13415099 None:intergenic 40.0%
GAGAGATCATAGTCCAGTTT+CGG - Chr8:13412611-13412630 MsG0880042743.01.T01:intron 40.0%
GAGGTTTGCAAAGGAAACTT+TGG - Chr8:13414090-13414109 MsG0880042743.01.T01:intron 40.0%
GATGACACTAGATGCATTAC+CGG - Chr8:13414054-13414073 MsG0880042743.01.T01:intron 40.0%
GATGTCTTCCACCAATTGTT+CGG - Chr8:13413482-13413501 MsG0880042743.01.T01:intron 40.0%
GCATACAATGTTCCTTGCAA+TGG - Chr8:13413982-13414001 MsG0880042743.01.T01:CDS 40.0%
GTGACCATCCAAATGAAAGA+GGG + Chr8:13414384-13414403 None:intergenic 40.0%
GTTTCGTGTAGTAGTAGCAT+GGG - Chr8:13412648-13412667 MsG0880042743.01.T01:intron 40.0%
TAACCGGTGAACAACTTCTA+AGG + Chr8:13414658-13414677 None:intergenic 40.0%
TACATTGCCCCAAGTTCAAT+GGG - Chr8:13414712-13414731 MsG0880042743.01.T01:CDS 40.0%
TATTCGGTCAGATACTTGTC+AGG + Chr8:13415685-13415704 None:intergenic 40.0%
TCCGTATTTGCAGCATTGTT+TGG - Chr8:13413134-13413153 MsG0880042743.01.T01:intron 40.0%
TGTTTCGTGTAGTAGTAGCA+TGG - Chr8:13412647-13412666 MsG0880042743.01.T01:intron 40.0%
TTATCAATCTCTGCACACTG+TGG - Chr8:13414816-13414835 MsG0880042743.01.T01:intron 40.0%
TTGCAAGGAACATTGTATGC+AGG + Chr8:13413982-13414001 None:intergenic 40.0%
TTTGGAAACTGCTGTGTTGT+TGG - Chr8:13413152-13413171 MsG0880042743.01.T01:intron 40.0%
! GCTGTAGGTTGACAACATAT+AGG - Chr8:13415554-13415573 MsG0880042743.01.T01:CDS 40.0%
! TAGAAGTTGTTCACCGGTTA+TGG - Chr8:13414658-13414677 MsG0880042743.01.T01:CDS 40.0%
! TCATTTTCACCGACGAAGTT+TGG - Chr8:13412576-13412595 MsG0880042743.01.T01:intron 40.0%
! TCTACTGGTGTTAGATTACG+CGG - Chr8:13412780-13412799 MsG0880042743.01.T01:CDS 40.0%
! TGCTTTGGGTTCTTCTTGTT+TGG - Chr8:13412749-13412768 MsG0880042743.01.T01:CDS 40.0%
!! CAGTACTAGATTTGTTGGAG+AGG - Chr8:13415518-13415537 MsG0880042743.01.T01:CDS 40.0%
!! GGAGTTGCTGATTTAGTTGA+AGG - Chr8:13413279-13413298 MsG0880042743.01.T01:CDS 40.0%
!! GTGTTTGTTTTCATCTCCGA+CGG - Chr8:13412461-13412480 MsG0880042743.01.T01:intron 40.0%
!! TTTACTTCGAGTTTTTCCGG+TGG - Chr8:13412504-13412523 MsG0880042743.01.T01:intron 40.0%
AATTGTTCGGGGTACATCTC+TGG - Chr8:13413495-13413514 MsG0880042743.01.T01:intron 45.0%
ACAGGCTTGTGATTCAGTCT+TGG + Chr8:13415604-13415623 None:intergenic 45.0%
ACTGAGTCACTTAAGCAAGC+TGG - Chr8:13413913-13413932 MsG0880042743.01.T01:CDS 45.0%
AGAGATGTACCCCGAACAAT+TGG + Chr8:13413496-13413515 None:intergenic 45.0%
AGAGCTTTCGTCAAAGCTTG+TGG - Chr8:13414210-13414229 MsG0880042743.01.T01:intron 45.0%
AGATACTTGTCAGGTATGGC+TGG + Chr8:13415676-13415695 None:intergenic 45.0%
AGGATCTAGATCTTCGTCAC+CGG - Chr8:13412383-13412402 MsG0880042743.01.T01:CDS 45.0%
ATCTCAAACCAAACAGGCCT+TGG - Chr8:13415387-13415406 MsG0880042743.01.T01:CDS 45.0%
ATGTGCTTCAGATGGTTGAG+TGG - Chr8:13414962-13414981 MsG0880042743.01.T01:CDS 45.0%
CAAGATCCACCAAACTTCGT+CGG + Chr8:13412588-13412607 None:intergenic 45.0%
CAAGGAACATTGTATGCAGG+CGG + Chr8:13413979-13413998 None:intergenic 45.0%
CTGATTTAGTTGAAGGGGTG+AGG - Chr8:13413286-13413305 MsG0880042743.01.T01:CDS 45.0%
GAAAGCTCTTTGTGCTGTAC+AGG + Chr8:13414199-13414218 None:intergenic 45.0%
GAAGCTGAGAAAGCTCATAG+AGG - Chr8:13412999-13413018 MsG0880042743.01.T01:CDS 45.0%
GAGCAAGCACTCAAAGATGA+AGG - Chr8:13414277-13414296 MsG0880042743.01.T01:intron 45.0%
GCCTCAATTCTTCCTTCAGA+GGG + Chr8:13415582-13415601 None:intergenic 45.0%
GCTGCGCTTGATTGTTGATA+AGG - Chr8:13414614-13414633 MsG0880042743.01.T01:CDS 45.0%
GGACACTGAAAAACCGAAAC+TGG + Chr8:13412627-13412646 None:intergenic 45.0%
GGACAGTTATCAGCATGAGA+AGG + Chr8:13415081-13415100 None:intergenic 45.0%
GGGCTAACTGTATCAAGCAT+GGG - Chr8:13415736-13415755 MsG0880042743.01.T01:five_prime_UTR 45.0%
GGTCAGATACTTGTCAGGTA+TGG + Chr8:13415680-13415699 None:intergenic 45.0%
GGTGTAGAACACACACTACT+CGG + Chr8:13412336-13412355 None:intergenic 45.0%
GTACCGGAACAATTCGATCA+GGG - Chr8:13412682-13412701 MsG0880042743.01.T01:intron 45.0%
TCATGAAACCAAGGCCTGTT+TGG + Chr8:13415398-13415417 None:intergenic 45.0%
TGAGAAAGCTCATAGAGGAC+AGG - Chr8:13413004-13413023 MsG0880042743.01.T01:CDS 45.0%
TGTCTTCCACCAATTGTTCG+GGG - Chr8:13413484-13413503 MsG0880042743.01.T01:intron 45.0%
TGTGCTTCAGATGGTTGAGT+GGG - Chr8:13414963-13414982 MsG0880042743.01.T01:CDS 45.0%
TGTTTGTAGATGCGAGCTAG+TGG - Chr8:13413108-13413127 MsG0880042743.01.T01:intron 45.0%
TTCAGCGAATGTATGATCGC+GGG - Chr8:13415716-13415735 MsG0880042743.01.T01:five_prime_UTR 45.0%
! ACTTTTGTGGAGGGTTGTGT+TGG - Chr8:13412882-13412901 MsG0880042743.01.T01:CDS 45.0%
! ATATACGGGATGTTTGGAGC+TGG - Chr8:13413258-13413277 MsG0880042743.01.T01:CDS 45.0%
! ATTCCTAATCGGTTGGCCAA+AGG + Chr8:13414127-13414146 None:intergenic 45.0%
! GCGCTTGATTGTTGATAAGG+AGG - Chr8:13414617-13414636 MsG0880042743.01.T01:CDS 45.0%
! TCCCTCTGAAGGAAGAATTG+AGG - Chr8:13415578-13415597 MsG0880042743.01.T01:CDS 45.0%
! TTTTCACCGACGAAGTTTGG+TGG - Chr8:13412579-13412598 MsG0880042743.01.T01:intron 45.0%
!! CTAGATTTGTTGGAGAGGGT+CGG - Chr8:13415523-13415542 MsG0880042743.01.T01:CDS 45.0%
!! GCTGTGTTGTTGGCTTTGAT+CGG - Chr8:13413162-13413181 MsG0880042743.01.T01:intron 45.0%
!! GGGTTTGTGAGAAGTGCTTT+GGG - Chr8:13412735-13412754 MsG0880042743.01.T01:intron 45.0%
!! GGTGAATTTGATGGTGTTGG+TGG - Chr8:13412816-13412835 MsG0880042743.01.T01:CDS 45.0%
!! GGTGGTGAATTTGATGGTGT+TGG - Chr8:13412813-13412832 MsG0880042743.01.T01:CDS 45.0%
!! TAGATTTGTTGGAGAGGGTC+GGG - Chr8:13415524-13415543 MsG0880042743.01.T01:CDS 45.0%
!! TGGGTTTGTGAGAAGTGCTT+TGG - Chr8:13412734-13412753 MsG0880042743.01.T01:intron 45.0%
!! TGGTGGTGATTCTGGAATTG+TGG - Chr8:13412833-13412852 MsG0880042743.01.T01:CDS 45.0%
!! TTTGTTTTCATCTCCGACGG+TGG - Chr8:13412464-13412483 MsG0880042743.01.T01:intron 45.0%
!!! ACTGGTGGTGGGTTTTTTGA+TGG - Chr8:13412714-13412733 MsG0880042743.01.T01:intron 45.0%
!!! CTGGTGGTGGGTTTTTTGAT+GGG - Chr8:13412715-13412734 MsG0880042743.01.T01:intron 45.0%
ACGTCTGGGAAATCGGTGAT+GGG - Chr8:13412429-13412448 MsG0880042743.01.T01:intron 50.0%
AGCGCAGCCCATAAATGTCA+TGG + Chr8:13414602-13414621 None:intergenic 50.0%
ATCTCTGCACACTGTGGTGA+TGG - Chr8:13414822-13414841 MsG0880042743.01.T01:intron 50.0%
ATCTTCATCACCACCACCAC+CGG + Chr8:13412523-13412542 None:intergenic 50.0%
CAAGCAGCAGAGGTTTGCAA+AGG - Chr8:13414081-13414100 MsG0880042743.01.T01:intron 50.0%
CATGCACCTCAGACCATAAC+CGG + Chr8:13414674-13414693 None:intergenic 50.0%
CCTCCCTGATCGAATTGTTC+CGG + Chr8:13412688-13412707 None:intergenic 50.0%
CGGAACAATTCGATCAGGGA+GGG - Chr8:13412686-13412705 MsG0880042743.01.T01:intron 50.0%
CGGGCTAACTGTATCAAGCA+TGG - Chr8:13415735-13415754 MsG0880042743.01.T01:five_prime_UTR 50.0%
CTCTTGCATCTGCCATTGCA+AGG + Chr8:13413997-13414016 None:intergenic 50.0%
CTTTGCAAACCTCTGCTGCT+TGG + Chr8:13414083-13414102 None:intergenic 50.0%
GATGTACCCCGAACAATTGG+TGG + Chr8:13413493-13413512 None:intergenic 50.0%
GCATGAGAAGGGAACTTGCA+AGG + Chr8:13415069-13415088 None:intergenic 50.0%
GGAACAATTCGATCAGGGAG+GGG - Chr8:13412687-13412706 MsG0880042743.01.T01:intron 50.0%
GGCCTCAATTCTTCCTTCAG+AGG + Chr8:13415583-13415602 None:intergenic 50.0%
GTAGAACACACACTACTCGG+TGG + Chr8:13412333-13412352 None:intergenic 50.0%
TACGTCTGGGAAATCGGTGA+TGG - Chr8:13412428-13412447 MsG0880042743.01.T01:intron 50.0%
TACTGCTACTGCAAGCAGCA+TGG - Chr8:13415762-13415781 MsG0880042743.01.T01:five_prime_UTR 50.0%
TCTCTGCACACTGTGGTGAT+GGG - Chr8:13414823-13414842 MsG0880042743.01.T01:intron 50.0%
TGAGAAGGGAACTTGCAAGG+TGG + Chr8:13415066-13415085 None:intergenic 50.0%
TGTAGTAGTAGCATGGGTGC+CGG - Chr8:13412654-13412673 MsG0880042743.01.T01:intron 50.0%
TTGGATTCGCTGCTCATTGG+AGG - Chr8:13414908-13414927 MsG0880042743.01.T01:CDS 50.0%
! ACTGGTGTTAGATTACGCGG+TGG - Chr8:13412783-13412802 MsG0880042743.01.T01:CDS 50.0%
! AGAGAGAAGCACGCAAGAGA+TGG + Chr8:13411994-13412013 None:intergenic 50.0%
! CGACGAAGTTTGGTGGATCT+TGG - Chr8:13412586-13412605 MsG0880042743.01.T01:intron 50.0%
! GGTACCGGAACAATTCGATC+AGG - Chr8:13412681-13412700 MsG0880042743.01.T01:intron 50.0%
! GGTTATGGTCTGAGGTGCAT+GGG - Chr8:13414673-13414692 MsG0880042743.01.T01:CDS 50.0%
! TGTTCACCGGTTATGGTCTG+AGG - Chr8:13414665-13414684 MsG0880042743.01.T01:CDS 50.0%
!! ACTTCGAGTTTTTCCGGTGG+TGG - Chr8:13412507-13412526 MsG0880042743.01.T01:intron 50.0%
!! GATGGTGTTGGTGGTGATTC+TGG - Chr8:13412825-13412844 MsG0880042743.01.T01:CDS 50.0%
!! GGTGGTGGTGGTGAATTTGA+TGG - Chr8:13412807-13412826 MsG0880042743.01.T01:CDS 50.0%
AATTGTTCCGGTACCCGCAC+CGG + Chr8:13412676-13412695 None:intergenic 55.0%
ACTCATTGCTTCGCACTGCC+AGG + Chr8:13415004-13415023 None:intergenic 55.0%
ATCTTCGTCACCGGCGTCTA+CGG - Chr8:13412392-13412411 MsG0880042743.01.T01:CDS 55.0%
CCGGAACAATTCGATCAGGG+AGG - Chr8:13412685-13412704 MsG0880042743.01.T01:intron 55.0%
GCACCTTTGGCCAACCGATT+AGG - Chr8:13414121-13414140 MsG0880042743.01.T01:intron 55.0%
GCTACTGCAAGCAGCATGGT+TGG - Chr8:13415766-13415785 MsG0880042743.01.T01:five_prime_UTR 55.0%
GGCGTCTACGTCTGGGAAAT+CGG - Chr8:13412422-13412441 MsG0880042743.01.T01:intron 55.0%
GGTGTTAGATTACGCGGTGG+TGG - Chr8:13412786-13412805 MsG0880042743.01.T01:CDS 55.0%
TTACAAGCCTGATTGCGGGC+AGG - Chr8:13415107-13415126 MsG0880042743.01.T01:CDS 55.0%
! AACCTCTGCTGCTTGGCAAC+CGG + Chr8:13414076-13414095 None:intergenic 55.0%
! ACATGCTGCTTCACCACCGT+CGG + Chr8:13412480-13412499 None:intergenic 55.0%
! AGATGGTTGAGTGGGCTCGA+TGG - Chr8:13414971-13414990 MsG0880042743.01.T01:CDS 55.0%
! CGCTGCTCATTGGAGGTACA+AGG - Chr8:13414915-13414934 MsG0880042743.01.T01:CDS 55.0%
! CGGTTATGGTCTGAGGTGCA+TGG - Chr8:13414672-13414691 MsG0880042743.01.T01:CDS 55.0%
! GATGGTTGAGTGGGCTCGAT+GGG - Chr8:13414972-13414991 MsG0880042743.01.T01:CDS 55.0%
! GTTAGATTACGCGGTGGTGG+TGG - Chr8:13412789-13412808 MsG0880042743.01.T01:CDS 55.0%
!! CACACTGTGGTGATGGGTGA+AGG - Chr8:13414829-13414848 MsG0880042743.01.T01:intron 55.0%
!! TCGAGTTTTTCCGGTGGTGG+TGG - Chr8:13412510-13412529 MsG0880042743.01.T01:intron 55.0%
!! TCTGGGAAATCGGTGATGGG+TGG - Chr8:13412432-13412451 MsG0880042743.01.T01:intron 55.0%
!! TGTGGTGATGGGTGAAGGCA+AGG - Chr8:13414834-13414853 MsG0880042743.01.T01:intron 55.0%
AAGCCTGATTGCGGGCAGGA+TGG - Chr8:13415111-13415130 MsG0880042743.01.T01:CDS 60.0%
! CGATCAGGGAGGGGAAGTAC+TGG - Chr8:13412696-13412715 MsG0880042743.01.T01:intron 60.0%
! TACCGGTTGCCAAGCAGCAG+AGG - Chr8:13414071-13414090 MsG0880042743.01.T01:intron 60.0%
!! AGATTACGCGGTGGTGGTGG+TGG - Chr8:13412792-13412811 MsG0880042743.01.T01:CDS 60.0%
!! GGAGGGGAAGTACTGGTGGT+GGG - Chr8:13412703-13412722 MsG0880042743.01.T01:intron 60.0%
!! TAGTAGCATGGGTGCCGGTG+CGG - Chr8:13412659-13412678 MsG0880042743.01.T01:intron 60.0%
!! TCAGGGAGGGGAAGTACTGG+TGG - Chr8:13412699-13412718 MsG0880042743.01.T01:intron 60.0%
GGTCCATCCTGCCCGCAATC+AGG + Chr8:13415117-13415136 None:intergenic 65.0%
!! AGTAGCATGGGTGCCGGTGC+GGG - Chr8:13412660-13412679 MsG0880042743.01.T01:intron 65.0%
!! GGGAGGGGAAGTACTGGTGG+TGG - Chr8:13412702-13412721 MsG0880042743.01.T01:intron 65.0%
!! GGGCTCGATGGGTTGTCACC+TGG - Chr8:13414983-13415002 MsG0880042743.01.T01:CDS 65.0%
!! TTACGCGGTGGTGGTGGTGG+TGG - Chr8:13412795-13412814 MsG0880042743.01.T01:CDS 65.0%
CGACGGCGGCGTCTACGTCT+GGG - Chr8:13412415-13412434 MsG0880042743.01.T01:intron 70.0%
GGGTCGGGCGAGCAAGCTGT+AGG - Chr8:13415539-13415558 MsG0880042743.01.T01:CDS 70.0%
GTCACCGGCGTCTACGGCGA+CGG - Chr8:13412398-13412417 MsG0880042743.01.T01:CDS 70.0%
!! ATGGGTGCCGGTGCGGGTAC+CGG - Chr8:13412666-13412685 MsG0880042743.01.T01:intron 70.0%
ACCGGCGTCTACGGCGACGG+CGG - Chr8:13412401-13412420 MsG0880042743.01.T01:CDS 75.0%
GCGACGGCGGCGTCTACGTC+TGG - Chr8:13412414-13412433 MsG0880042743.01.T01:intron 75.0%
! GCCGCCGTCGCCGTAGACGC+CGG + Chr8:13412405-13412424 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
Chr8 gene 13411945 13415971 13411945 ID=MsG0880042743.01;Name=MsG0880042743.01
Chr8 mRNA 13411945 13415971 13411945 ID=MsG0880042743.01.T01;Parent=MsG0880042743.01;Name=MsG0880042743.01.T01;_AED=0.47;_eAED=0.47;_QI=352|1|1|1|1|1|6|173|732
Chr8 exon 13411945 13412429 13411945 ID=MsG0880042743.01.T01:exon:3743;Parent=MsG0880042743.01.T01
Chr8 exon 13412749 13413100 13412749 ID=MsG0880042743.01.T01:exon:3742;Parent=MsG0880042743.01.T01
Chr8 exon 13413183 13413341 13413183 ID=MsG0880042743.01.T01:exon:3741;Parent=MsG0880042743.01.T01
Chr8 exon 13413551 13414011 13413551 ID=MsG0880042743.01.T01:exon:3740;Parent=MsG0880042743.01.T01
Chr8 exon 13414614 13414799 13414614 ID=MsG0880042743.01.T01:exon:3739;Parent=MsG0880042743.01.T01
Chr8 exon 13414891 13415971 13414891 ID=MsG0880042743.01.T01:exon:3738;Parent=MsG0880042743.01.T01
Chr8 five_prime_UTR 13415620 13415971 13415620 ID=MsG0880042743.01.T01:five_prime_utr;Parent=MsG0880042743.01.T01
Chr8 CDS 13414891 13415619 13414891 ID=MsG0880042743.01.T01:cds;Parent=MsG0880042743.01.T01
Chr8 CDS 13414614 13414799 13414614 ID=MsG0880042743.01.T01:cds;Parent=MsG0880042743.01.T01
Chr8 CDS 13413551 13414011 13413551 ID=MsG0880042743.01.T01:cds;Parent=MsG0880042743.01.T01
Chr8 CDS 13413183 13413341 13413183 ID=MsG0880042743.01.T01:cds;Parent=MsG0880042743.01.T01
Chr8 CDS 13412749 13413100 13412749 ID=MsG0880042743.01.T01:cds;Parent=MsG0880042743.01.T01
Chr8 CDS 13412118 13412429 13412118 ID=MsG0880042743.01.T01:cds;Parent=MsG0880042743.01.T01
Chr8 three_prime_UTR 13411945 13412117 13411945 ID=MsG0880042743.01.T01:three_prime_utr;Parent=MsG0880042743.01.T01
Gene Sequence

>MsG0880042743.01.T01

ATGGCGGTTTCAACTATAGCGTTATACGCAAGTCCACCGAGTAGTGTGTGTTCTACACCGCATCAGATTAACTATGATTTCGAATTAGGATCTAGATCTTCGTCACCGGCGTCTACGGCGACGGCGGCGTCTACGTCTGGGAAATCGGTGATGGGTGGTTTATCGTGTTTGTTTTCATCTCCGACGGTGGTGAAGCAGCATGTTCCTTTTACTTCGAGTTTTTCCGGTGGTGGTGGTGATGAAGATGAATTGAAGGAGCTGAGTAGTTCGTTTTCGTATTCATTTTCACCGACGAAGTTTGGTGGATCTTGGAAGAGAGATCATAGTCCAGTTTCGGTTTTTCAGTGTCCTGTTTCGTGTAGTAGTAGCATGGGTGCCGGTGCGGGTACCGGAACAATTCGATCAGGGAGGGGAAGTACTGGTGGTGGGTTTTTTGATGGGTTTGTGAGAAGTGCTTTGGGTTCTTCTTGTTTGGATTATGATTCTACTGGTGTTAGATTACGCGGTGGTGGTGGTGGTGGTGAATTTGATGGTGTTGGTGGTGATTCTGGAATTGTGGATGAGTTGACTTTTAATTTGGATGATACTTTTGTGGAGGGTTGTGTTGGAATTGAGATTGAGCCTTATGCTAAGAAGTTGTTGATGAATGCTCAGTTAAGACATAAGATCTTTTGTGAAGAGTTTGTTATTAAGGCCTTTTGTGAAGCTGAGAAAGCTCATAGAGGACAGATGCGAGCTAGTGGCGATCCGTATTTGCAGCATTGTTTGGAAACTGCTGTGTTGTTGGCTTTGATCGGTGCGAATTCAACAGTAGTTGCTGCTGGGCTTTTGCATGATACAGTTGATGATGCATTTCTTACTTATGATTATATATACGGGATGTTTGGAGCTGGAGTTGCTGATTTAGTTGAAGGGGTTTCTAAACTGAGTCACTTAAGCAAGCTGGCTCGAGACAATAATACAGCTAGCAAATCTGTTGAAGCTGACCGCCTGCATACAATGTTCCTTGCAATGGCAGATGCAAGAGCTGTCCTCATTAAATTGGCTGATCGATTACATAATATGATGACACTAGATGCATTACCGGTTGCCAAGCAGCAGAGGTTTGCAAAGGAAACTTTGGAGATTTTTGCACCTTTGGCCAACCGATTAGGAATAGCTAATTGGAAGGAACAATTAGAAAATTTATGTTTTAAGCATCTCAACCCTGTACAGCACAAAGAGCTTTCGTCAAAGCTTGTGGAATCGTATGATGACGCAATGATTGCTTCTGCAATAGAAAGATTAGAGCAAGCACTCAAAGATGAAGGCATTTCTTATCATGTCATTTCTGGACGGCACAAGAGCTTGTATAGCGTTTATTGCAAAATATTAAAGAAAAAACTAAGCATAGATGATATCCATGACATTTATGGGCTGCGCTTGATTGTTGATAAGGAGGAAGATTGTTACAAAGCCTTAGAAGTTGTTCACCGGTTATGGTCTGAGGTGCATGGGAAACTGAAAGATTACATACATTGCCCCAAGTTCAATGGTTATCAATCTCTGCACACTGTGGTGATGGGTGAAGGCAAGGTTCCCCTTGAAGTACAAATTCGAACAAAAGATATGCATTTGCAAGCAGAATTTGGATTCGCTGCTCATTGGAGGTACAAGGAAGATCATTGTCAACTTTCTTCATATGTGCTTCAGATGGTTGAGTGGGCTCGATGGGTTGTCACCTGGCAGTGCGAAGCAATGAGTAAAGATTCCACTTCTGTTGGATTTGTCGATTCAATCAAGCCACCTTGCAAGTTCCCTTCTCATGCTGATAACTGTCCATATTCTTACAAGCCTGATTGCGGGCAGGATGGACCTGTGTTTGTTATCATGATTGAGAATGACAAGATGTCTGTCCAAGAATTTTGTGCAAACTCGACAGTACTAGATTTGTTGGAGAGGGTCGGGCGAGCAAGCTGTAGGTTGACAACATATAGGTTCCCTCTGAAGGAAGAATTGAGGCCAAGACTGAATCACAAGCCTGTAAGTGATCCAAATTGCAAGTTGAAGATGGGAGATGTGATCGAGCTTACACCAGCCATACCTGACAAGTATCTGACCGAATATAGGGAAGAAATTCAGCGAATGTATGATCGCGGGCTAACTGTATCAAGCATGGGAACTACTGCTACTGCAAGCAGCATGGTTGGCACTAGTTGA

Protein sequence

>MsG0880042743.01.T01

MAVSTIALYASPPSSVCSTPHQINYDFELGSRSSSPASTATAASTSGKSVMGGLSCLFSSPTVVKQHVPFTSSFSGGGGDEDELKELSSSFSYSFSPTKFGGSWKRDHSPVSVFQCPVSCSSSMGAGAGTGTIRSGRGSTGGGFFDGFVRSALGSSCLDYDSTGVRLRGGGGGGEFDGVGGDSGIVDELTFNLDDTFVEGCVGIEIEPYAKKLLMNAQLRHKIFCEEFVIKAFCEAEKAHRGQMRASGDPYLQHCLETAVLLALIGANSTVVAAGLLHDTVDDAFLTYDYIYGMFGAGVADLVEGVSKLSHLSKLARDNNTASKSVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPVAKQQRFAKETLEIFAPLANRLGIANWKEQLENLCFKHLNPVQHKELSSKLVESYDDAMIASAIERLEQALKDEGISYHVISGRHKSLYSVYCKILKKKLSIDDIHDIYGLRLIVDKEEDCYKALEVVHRLWSEVHGKLKDYIHCPKFNGYQSLHTVVMGEGKVPLEVQIRTKDMHLQAEFGFAAHWRYKEDHCQLSSYVLQMVEWARWVVTWQCEAMSKDSTSVGFVDSIKPPCKFPSHADNCPYSYKPDCGQDGPVFVIMIENDKMSVQEFCANSTVLDLLERVGRASCRLTTYRFPLKEELRPRLNHKPVSDPNCKLKMGDVIELTPAIPDKYLTEYREEIQRMYDRGLTVSSMGTTATASSMVGTS*