AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280007390.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280007390.01.T01 MTR_2g023920 85.714 133 3 2 14 145 1 118 5.16e-76 222
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280007390.01.T01 AT3G05810 50.769 130 46 2 16 145 1 112 3.85e-37 123
MsG0280007390.01.T01 AT3G05810 50.769 130 46 2 16 145 1 112 3.85e-37 123

Find 36 sgRNAs with CRISPR-Local

Find 165 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTAAGCTCGATTCCGAAAT+TGG 0.223329 2:+14840042 MsG0280007390.01.T01:CDS
ACAAGTACAGGTTGGGATTA+TGG 0.289310 2:+14842138 MsG0280007390.01.T01:CDS
CTTCTGGAAGTCACCAATTT+CGG 0.301377 2:-14840055 None:intergenic
TTATGTCCTTGCGTGATATT+AGG 0.309939 2:+14839725 None:intergenic
TGGTGACTTCCAGAAGCTTC+TGG 0.312220 2:+14840062 MsG0280007390.01.T01:CDS
GTTGAAGATTGAAAGCAATA+TGG 0.363212 2:+14839747 MsG0280007390.01.T01:CDS
TTCGAGTAACCAGAAGCTTC+TGG 0.370946 2:-14840071 None:intergenic
ACCAACGTAGGGTGTTGATT+TGG 0.411994 2:-14839872 None:intergenic
TACCGAGCTTCTTGAGTTTG+AGG 0.413680 2:-14840095 None:intergenic
TGCAGTCAAGGTTGGAATAC+CGG 0.425274 2:+14839978 MsG0280007390.01.T01:intron
ACCGAGCTTCTTGAGTTTGA+GGG 0.452406 2:-14840094 None:intergenic
AAAGCAATATGGCAATGTTA+TGG 0.463415 2:+14839758 MsG0280007390.01.T01:CDS
CTAGTTGTGAGAAAGTTTGC+CGG 0.487479 2:-14842076 None:intergenic
TAATGATTTGCAGTCAAGGT+TGG 0.510496 2:+14839970 MsG0280007390.01.T01:intron
TGAAACATGCACACAAGTAC+AGG 0.517272 2:+14842126 MsG0280007390.01.T01:CDS
AATATTAGCTTCCTCTGCAA+AGG 0.521734 2:-14842104 None:intergenic
CATGCACACAAGTACAGGTT+GGG 0.529816 2:+14842131 MsG0280007390.01.T01:CDS
ATGCAGAGAGTCATAAGAAA+CGG 0.534108 2:+14839787 MsG0280007390.01.T01:CDS
GAAACTAATCATGCTTTGAT+CGG 0.541142 2:-14842176 None:intergenic
AAATGACTTACATGTTTGCA+AGG 0.566149 2:-14840120 None:intergenic
GAAAAGTAAGACGAAGAATG+TGG 0.567282 2:-14839835 None:intergenic
ACCCTCAAACTCAAGAAGCT+CGG 0.578810 2:+14840093 MsG0280007390.01.T01:CDS
ACATGCACACAAGTACAGGT+TGG 0.579417 2:+14842130 MsG0280007390.01.T01:CDS
GTAGGGTGTTGATTTGGAGT+AGG 0.579611 2:-14839866 None:intergenic
AACTAGTTTATCCTTTGCAG+AGG 0.593384 2:+14842093 MsG0280007390.01.T01:CDS
GAGGAAGTGTTACCAACGTA+GGG 0.595333 2:-14839883 None:intergenic
AAAAGTAAGACGAAGAATGT+GGG 0.599516 2:-14839834 None:intergenic
AGACGAAGAATGTGGGTGTG+TGG 0.619256 2:-14839827 None:intergenic
CTTCAACCTAATATCACGCA+AGG 0.621489 2:-14839731 None:intergenic
GGAGGAAGTGTTACCAACGT+AGG 0.635206 2:-14839884 None:intergenic
GTTGTGAGAAAGTTTGCCGG+TGG 0.641811 2:-14842073 None:intergenic
TCCAAATCAACACCCTACGT+TGG 0.650781 2:+14839871 MsG0280007390.01.T01:CDS
GCTTTGATCGGCTCACCACG+TGG 0.656182 2:-14842164 None:intergenic
CATACAATTAGCTAGTCCAC+CGG 0.666800 2:+14842057 MsG0280007390.01.T01:intron
AGTACAGGTTGGGATTATGG+AGG 0.709259 2:+14842141 MsG0280007390.01.T01:CDS
TTGGGATTATGGAGGCCACG+TGG 0.740389 2:+14842149 MsG0280007390.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATATAAAATGAAACTTGTA+TGG + Chr2:14841885-14841904 MsG0280007390.01.T01:intron 15.0%
!! CTAATAGGAAAAATTATAAA+AGG + Chr2:14840797-14840816 MsG0280007390.01.T01:intron 15.0%
!! GTTAAATTTATCGAAATTTA+AGG + Chr2:14841225-14841244 MsG0280007390.01.T01:intron 15.0%
!! TCTACAATTAAATTGTATTT+CGG + Chr2:14840620-14840639 MsG0280007390.01.T01:intron 15.0%
!! TTCTTATTAGAGAATAATAT+TGG + Chr2:14840278-14840297 MsG0280007390.01.T01:intron 15.0%
!!! ACAGTTTTTTTACAAAAAAA+TGG - Chr2:14840996-14841015 None:intergenic 15.0%
!!! CTTTTATAATTTTTCCTATT+AGG - Chr2:14840799-14840818 None:intergenic 15.0%
!!! TTTTTATAAATACCATACTT+AGG + Chr2:14841753-14841772 MsG0280007390.01.T01:intron 15.0%
!! AATATCTTCAATTACCTAAT+AGG + Chr2:14840782-14840801 MsG0280007390.01.T01:intron 20.0%
!! ACAAATAAATAAGTTGTCAT+AGG + Chr2:14841323-14841342 MsG0280007390.01.T01:intron 20.0%
!! ACAATTAATTTCTACCAATA+AGG - Chr2:14840253-14840272 None:intergenic 20.0%
!! ATGTAAGATACAAAATAATC+TGG - Chr2:14841792-14841811 None:intergenic 20.0%
!! CAATTAATTTCTACCAATAA+GGG - Chr2:14840252-14840271 None:intergenic 20.0%
!! TAGGTAATTGAAGATATTAA+AGG - Chr2:14840780-14840799 None:intergenic 20.0%
!! TAGTAATCTAATTATATACC+TGG - Chr2:14841655-14841674 None:intergenic 20.0%
!! TATAAAACGTTAAAGACAAA+TGG - Chr2:14840856-14840875 None:intergenic 20.0%
!!! ATTTTTAAATGGAATTGGAA+AGG + Chr2:14840002-14840021 MsG0280007390.01.T01:CDS 20.0%
!!! CAGTTATGTTGTTTATTTTT+AGG + Chr2:14840371-14840390 MsG0280007390.01.T01:intron 20.0%
!!! GTAACAATTTTAGCTTTTAA+TGG + Chr2:14841374-14841393 MsG0280007390.01.T01:intron 20.0%
!!! GTTTTTTTACAAAAAAATGG+TGG - Chr2:14840993-14841012 None:intergenic 20.0%
!!! TTTTTAAATGGAATTGGAAA+GGG + Chr2:14840003-14840022 MsG0280007390.01.T01:CDS 20.0%
! AAGGAGAAAGTGATTATTTA+TGG + Chr2:14840411-14840430 MsG0280007390.01.T01:intron 25.0%
! ACATAAATTAAGGAAAGAGA+TGG - Chr2:14840523-14840542 None:intergenic 25.0%
! ACGAAAAGAAGTTAAGTAAA+GGG - Chr2:14839916-14839935 None:intergenic 25.0%
! ACGATTGATGAGTATTAAAA+AGG - Chr2:14839941-14839960 None:intergenic 25.0%
! AGGAGAAAGTGATTATTTAT+GGG + Chr2:14840412-14840431 MsG0280007390.01.T01:intron 25.0%
! CCAATTCCATTTAAAAATTC+CGG - Chr2:14840000-14840019 None:intergenic 25.0%
! TTATAAATACCATACTTAGG+AGG + Chr2:14841756-14841775 MsG0280007390.01.T01:intron 25.0%
! TTGTAACTTTAAACTGAAAC+TGG + Chr2:14841131-14841150 MsG0280007390.01.T01:intron 25.0%
! TTGTATGTAATTCTTATGAC+TGG + Chr2:14841105-14841124 MsG0280007390.01.T01:intron 25.0%
!! ATTTATCGAAATTTAAGGCT+TGG + Chr2:14841230-14841249 MsG0280007390.01.T01:intron 25.0%
!! TGAAATAAGATCAGTCATTT+TGG + Chr2:14840933-14840952 MsG0280007390.01.T01:intron 25.0%
!! TTTTAATACTCATCAATCGT+TGG + Chr2:14839941-14839960 MsG0280007390.01.T01:intron 25.0%
!!! GAAATAAGATCAGTCATTTT+GGG + Chr2:14840934-14840953 MsG0280007390.01.T01:intron 25.0%
!!! GACTTTATTTTGATTGTGAT+TGG + Chr2:14842026-14842045 MsG0280007390.01.T01:intron 25.0%
!!! TCAACTAGATCAGTTATTTT+GGG - Chr2:14840726-14840745 None:intergenic 25.0%
!!! TTTTAGGAATCAATAGAGAA+AGG + Chr2:14840387-14840406 MsG0280007390.01.T01:intron 25.0%
AAAAGTAAGACGAAGAATGT+GGG - Chr2:14839837-14839856 None:intergenic 30.0%
AAACTCTTTACTTCTTGGAA+GGG + Chr2:14840446-14840465 MsG0280007390.01.T01:intron 30.0%
AAAGCAATATGGCAATGTTA+TGG + Chr2:14839758-14839777 MsG0280007390.01.T01:CDS 30.0%
AAATGACTTACATGTTTGCA+AGG - Chr2:14840123-14840142 None:intergenic 30.0%
AAGTTAAGTAAAGGGAAAAG+AGG - Chr2:14839908-14839927 None:intergenic 30.0%
AGAAAGTGATTATTTATGGG+AGG + Chr2:14840415-14840434 MsG0280007390.01.T01:intron 30.0%
AGTTATGAACATCTAGTCAT+GGG + Chr2:14840328-14840347 MsG0280007390.01.T01:intron 30.0%
CAGAATGCACACATAAATTA+AGG - Chr2:14840533-14840552 None:intergenic 30.0%
GAAAGTGATTATTTATGGGA+GGG + Chr2:14840416-14840435 MsG0280007390.01.T01:intron 30.0%
GACGAAAAGAAGTTAAGTAA+AGG - Chr2:14839917-14839936 None:intergenic 30.0%
GTTGAAGATTGAAAGCAATA+TGG + Chr2:14839747-14839766 MsG0280007390.01.T01:CDS 30.0%
TAACAAAAATCAGATCCATC+TGG - Chr2:14841209-14841228 None:intergenic 30.0%
TAAGACAAAGAAGCAACATA+CGG - Chr2:14841304-14841323 None:intergenic 30.0%
TAGTTAACAATCCTATCCAA+CGG - Chr2:14840690-14840709 None:intergenic 30.0%
TTACAAGTTCATGTGCTTAT+TGG + Chr2:14840204-14840223 MsG0280007390.01.T01:intron 30.0%
TTAGGACTTAGGATTATCAA+AGG + Chr2:14841256-14841275 MsG0280007390.01.T01:intron 30.0%
! AAATTTAAGGCTTGGATGTT+AGG + Chr2:14841238-14841257 MsG0280007390.01.T01:intron 30.0%
! ACTGTTATTAGCTTAAGTCA+CGG + Chr2:14841011-14841030 MsG0280007390.01.T01:intron 30.0%
! ATGACTGATCTTATTTCACT+AGG - Chr2:14840931-14840950 None:intergenic 30.0%
! ATGTTAATGATTTGCAGTCA+AGG + Chr2:14839966-14839985 MsG0280007390.01.T01:intron 30.0%
! CCGGAATTTTTAAATGGAAT+TGG + Chr2:14839997-14840016 MsG0280007390.01.T01:CDS 30.0%
! GGAATACCGGAATTTTTAAA+TGG + Chr2:14839991-14840010 MsG0280007390.01.T01:CDS 30.0%
! GTCAACTAGATCAGTTATTT+TGG - Chr2:14840727-14840746 None:intergenic 30.0%
! TACAATGACCTATCAACTTT+TGG + Chr2:14841963-14841982 MsG0280007390.01.T01:intron 30.0%
! TATCAACTTTTGGTAGGATT+GGG + Chr2:14841973-14841992 MsG0280007390.01.T01:intron 30.0%
! TTACAAAAAAATGGTGGAAG+AGG - Chr2:14840987-14841006 None:intergenic 30.0%
!! ATGTAAGTCATTTTCCTCTA+TGG + Chr2:14840130-14840149 MsG0280007390.01.T01:intron 30.0%
AATAAGGGTTGCACAAGATA+GGG - Chr2:14840237-14840256 None:intergenic 35.0%
AATCTTATGACTCACAGATC+TGG + Chr2:14841938-14841957 MsG0280007390.01.T01:intron 35.0%
AGACCAAACTCTTTACTTCT+TGG + Chr2:14840441-14840460 MsG0280007390.01.T01:intron 35.0%
AGCTTAAGTCACGGTTAATT+TGG + Chr2:14841020-14841039 MsG0280007390.01.T01:intron 35.0%
AGTCACTTGTGATGCAATTA+TGG + Chr2:14841909-14841928 MsG0280007390.01.T01:intron 35.0%
ATGCAGAGAGTCATAAGAAA+CGG + Chr2:14839787-14839806 MsG0280007390.01.T01:CDS 35.0%
CAAACTCTTTACTTCTTGGA+AGG + Chr2:14840445-14840464 MsG0280007390.01.T01:intron 35.0%
CAGTTATGAACATCTAGTCA+TGG + Chr2:14840327-14840346 MsG0280007390.01.T01:intron 35.0%
CTAGCTAATTGTATGTCATG+TGG - Chr2:14842052-14842071 None:intergenic 35.0%
CTTCCAAGAAGTAAAGAGTT+TGG - Chr2:14840447-14840466 None:intergenic 35.0%
GAAAAGTAAGACGAAGAATG+TGG - Chr2:14839838-14839857 None:intergenic 35.0%
GGAATCAATAGAGAAAGGAA+AGG + Chr2:14840392-14840411 MsG0280007390.01.T01:intron 35.0%
GTTATGAACATCTAGTCATG+GGG + Chr2:14840329-14840348 MsG0280007390.01.T01:intron 35.0%
TAAAGGTCAAAATTGTGCAC+TGG - Chr2:14840763-14840782 None:intergenic 35.0%
TATACCTGGCTATCAAACAT+AGG - Chr2:14841641-14841660 None:intergenic 35.0%
TATTCATACGAATGCCATAG+AGG - Chr2:14840147-14840166 None:intergenic 35.0%
TGAATTATTAAGGGGGGAAA+GGG - Chr2:14841050-14841069 None:intergenic 35.0%
TGCATCATTAGCTAATTCCA+AGG + Chr2:14841838-14841857 MsG0280007390.01.T01:intron 35.0%
TTAAGTAAAGGGAAAAGAGG+AGG - Chr2:14839905-14839924 None:intergenic 35.0%
! AACTAGTTTATCCTTTGCAG+AGG + Chr2:14842093-14842112 MsG0280007390.01.T01:CDS 35.0%
! AAGAGATGGTCTGTTTTACA+AGG - Chr2:14840509-14840528 None:intergenic 35.0%
! AATATTAGCTTCCTCTGCAA+AGG - Chr2:14842107-14842126 None:intergenic 35.0%
! ATCAACTTTTGGTAGGATTG+GGG + Chr2:14841974-14841993 MsG0280007390.01.T01:intron 35.0%
! ATCTAAGATCCTCCTAAGTA+TGG - Chr2:14841768-14841787 None:intergenic 35.0%
! ATGACCTATCAACTTTTGGT+AGG + Chr2:14841967-14841986 MsG0280007390.01.T01:intron 35.0%
! CAATCCTACCAAAAGTTGAT+AGG - Chr2:14841974-14841993 None:intergenic 35.0%
! CTATCAACTTTTGGTAGGAT+TGG + Chr2:14841972-14841991 MsG0280007390.01.T01:intron 35.0%
! GCAAGTTAGTACTAGTCTAA+TGG - Chr2:14841542-14841561 None:intergenic 35.0%
! TAATGATTTGCAGTCAAGGT+TGG + Chr2:14839970-14839989 MsG0280007390.01.T01:intron 35.0%
!! AGCTTTAAAATGAGACCAGA+TGG + Chr2:14841191-14841210 MsG0280007390.01.T01:intron 35.0%
!! GCATGTTACACATGTTTTTG+TGG + Chr2:14841569-14841588 MsG0280007390.01.T01:intron 35.0%
!! TAAGATCAGTCATTTTGGGA+CGG + Chr2:14840938-14840957 MsG0280007390.01.T01:intron 35.0%
!! TCTGTTGTTGACTCTGATAT+TGG + Chr2:14841861-14841880 MsG0280007390.01.T01:intron 35.0%
!!! CTAGATCAGTTATTTTGGGA+CGG - Chr2:14840722-14840741 None:intergenic 35.0%
!!! GATGTGTTGTCATTTTCATC+TGG + Chr2:14841604-14841623 MsG0280007390.01.T01:intron 35.0%
AAATCAATTGCTGTAGGCAG+AGG - Chr2:14841489-14841508 None:intergenic 40.0%
AATCAATTGCTGTAGGCAGA+GGG - Chr2:14841488-14841507 None:intergenic 40.0%
ACCAAGACTCTCGTATTTCT+TGG + Chr2:14840473-14840492 MsG0280007390.01.T01:intron 40.0%
ACTCGCATTCTGTTAGAAAC+TGG - Chr2:14840648-14840667 None:intergenic 40.0%
AGCCTGCTGAATTATTAAGG+GGG - Chr2:14841057-14841076 None:intergenic 40.0%
CAATAAGGGTTGCACAAGAT+AGG - Chr2:14840238-14840257 None:intergenic 40.0%
CAGCCTGCTGAATTATTAAG+GGG - Chr2:14841058-14841077 None:intergenic 40.0%
CATACAATTAGCTAGTCCAC+CGG + Chr2:14842057-14842076 MsG0280007390.01.T01:intron 40.0%
CCAGCCTGCTGAATTATTAA+GGG - Chr2:14841059-14841078 None:intergenic 40.0%
CCTTAATAATTCAGCAGGCT+GGG + Chr2:14841057-14841076 MsG0280007390.01.T01:intron 40.0%
CTAGTTGTGAGAAAGTTTGC+CGG - Chr2:14842079-14842098 None:intergenic 40.0%
CTATCTTGTGCAACCCTTAT+TGG + Chr2:14840236-14840255 MsG0280007390.01.T01:intron 40.0%
CTGAATTATTAAGGGGGGAA+AGG - Chr2:14841051-14841070 None:intergenic 40.0%
CTGACCCAATTGTAACTGAT+GGG - Chr2:14841707-14841726 None:intergenic 40.0%
CTTCAACCTAATATCACGCA+AGG - Chr2:14839734-14839753 None:intergenic 40.0%
GACTCTCGTATTTCTTGGAT+AGG + Chr2:14840478-14840497 MsG0280007390.01.T01:intron 40.0%
GATCCCCATCAGTTACAATT+GGG + Chr2:14841700-14841719 MsG0280007390.01.T01:intron 40.0%
GTGCAGAAATCAATTGCTGT+AGG - Chr2:14841495-14841514 None:intergenic 40.0%
TCCAAGAAATACGAGAGTCT+TGG - Chr2:14840477-14840496 None:intergenic 40.0%
TCTGACCCAATTGTAACTGA+TGG - Chr2:14841708-14841727 None:intergenic 40.0%
TGAAACATGCACACAAGTAC+AGG + Chr2:14842126-14842145 MsG0280007390.01.T01:CDS 40.0%
TGACCCAATTGTAACTGATG+GGG - Chr2:14841706-14841725 None:intergenic 40.0%
TGATCCCCATCAGTTACAAT+TGG + Chr2:14841699-14841718 MsG0280007390.01.T01:intron 40.0%
! AATGCCTATGTTTGATAGCC+AGG + Chr2:14841634-14841653 MsG0280007390.01.T01:intron 40.0%
! ACAAGTACAGGTTGGGATTA+TGG + Chr2:14842138-14842157 MsG0280007390.01.T01:CDS 40.0%
! CTTCTGGAAGTCACCAATTT+CGG - Chr2:14840058-14840077 None:intergenic 40.0%
!!! ATCAGTTATTTTGGGACGGA+AGG - Chr2:14840718-14840737 None:intergenic 40.0%
!!! GTTGTCATTTTCATCTGGCA+AGG + Chr2:14841609-14841628 MsG0280007390.01.T01:intron 40.0%
AAGGCATGCAGAGAGTCTTT+AGG + Chr2:14841275-14841294 MsG0280007390.01.T01:intron 45.0%
ACATGCACACAAGTACAGGT+TGG + Chr2:14842130-14842149 MsG0280007390.01.T01:CDS 45.0%
ACCCTCAAACTCAAGAAGCT+CGG + Chr2:14840093-14840112 MsG0280007390.01.T01:CDS 45.0%
ACCGAGCTTCTTGAGTTTGA+GGG - Chr2:14840097-14840116 None:intergenic 45.0%
ACCTGAACAGTAAAAGCTGC+AGG - Chr2:14841452-14841471 None:intergenic 45.0%
AGGCTTGGATGTTAGGACTT+AGG + Chr2:14841245-14841264 MsG0280007390.01.T01:intron 45.0%
CACATGCAATCATGCATCCA+GGG - Chr2:14841820-14841839 None:intergenic 45.0%
CATGCACACAAGTACAGGTT+GGG + Chr2:14842131-14842150 MsG0280007390.01.T01:CDS 45.0%
CCCAGCCTGCTGAATTATTA+AGG - Chr2:14841060-14841079 None:intergenic 45.0%
CCCTTAATAATTCAGCAGGC+TGG + Chr2:14841056-14841075 MsG0280007390.01.T01:intron 45.0%
GCCTGCTGAATTATTAAGGG+GGG - Chr2:14841056-14841075 None:intergenic 45.0%
GCTAAGCTCGATTCCGAAAT+TGG + Chr2:14840042-14840061 MsG0280007390.01.T01:CDS 45.0%
TACCGAGCTTCTTGAGTTTG+AGG - Chr2:14840098-14840117 None:intergenic 45.0%
TCAGAGTCAACAACAGACCT+TGG - Chr2:14841858-14841877 None:intergenic 45.0%
TCCAAATCAACACCCTACGT+TGG + Chr2:14839871-14839890 MsG0280007390.01.T01:CDS 45.0%
TCCCCCCTTAATAATTCAGC+AGG + Chr2:14841052-14841071 MsG0280007390.01.T01:intron 45.0%
TGCAGTCAAGGTTGGAATAC+CGG + Chr2:14839978-14839997 MsG0280007390.01.T01:intron 45.0%
TGTATCTTACATCTGTGCCC+TGG + Chr2:14841800-14841819 MsG0280007390.01.T01:intron 45.0%
TTCGAGTAACCAGAAGCTTC+TGG - Chr2:14840074-14840093 None:intergenic 45.0%
! ACCTGCAGCTTTTACTGTTC+AGG + Chr2:14841448-14841467 MsG0280007390.01.T01:intron 45.0%
! AGTACAGGTTGGGATTATGG+AGG + Chr2:14842141-14842160 MsG0280007390.01.T01:CDS 45.0%
!! ACCAACGTAGGGTGTTGATT+TGG - Chr2:14839875-14839894 None:intergenic 45.0%
!! GAGGAAGTGTTACCAACGTA+GGG - Chr2:14839886-14839905 None:intergenic 45.0%
!! GTAGGGTGTTGATTTGGAGT+AGG - Chr2:14839869-14839888 None:intergenic 45.0%
!!! ATCAGTCATTTTGGGACGGA+GGG + Chr2:14840942-14840961 MsG0280007390.01.T01:intron 45.0%
!! ATTTATAAAAAATGTATTTA+AGG - Chr2:14841744-14841763 None:intergenic 5.0%
AGACGAAGAATGTGGGTGTG+TGG - Chr2:14839830-14839849 None:intergenic 50.0%
GATGGGGATCATATGCCTAC+AGG - Chr2:14841690-14841709 None:intergenic 50.0%
GCACATGCAATCATGCATCC+AGG - Chr2:14841821-14841840 None:intergenic 50.0%
GCGTGATAAAGCCGTTGGAT+AGG + Chr2:14840676-14840695 MsG0280007390.01.T01:intron 50.0%
GTTGTGAGAAAGTTTGCCGG+TGG - Chr2:14842076-14842095 None:intergenic 50.0%
TGGTGACTTCCAGAAGCTTC+TGG + Chr2:14840062-14840081 MsG0280007390.01.T01:CDS 50.0%
! CTAGCGTCTAAGATGCCTGT+AGG + Chr2:14841672-14841691 MsG0280007390.01.T01:intron 50.0%
!! GGAGGAAGTGTTACCAACGT+AGG - Chr2:14839887-14839906 None:intergenic 50.0%
!!! GATCAGTCATTTTGGGACGG+AGG + Chr2:14840941-14840960 MsG0280007390.01.T01:intron 50.0%
TGTGCGCGTGATAAAGCCGT+TGG + Chr2:14840671-14840690 MsG0280007390.01.T01:intron 55.0%
TTGGGATTATGGAGGCCACG+TGG + Chr2:14842149-14842168 MsG0280007390.01.T01:CDS 55.0%
! GCTTTGATCGGCTCACCACG+TGG - Chr2:14842167-14842186 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
Chr2 gene 14839727 14842190 14839727 ID=MsG0280007390.01;Name=MsG0280007390.01
Chr2 mRNA 14839727 14842190 14839727 ID=MsG0280007390.01.T01;Parent=MsG0280007390.01;Name=MsG0280007390.01.T01;_AED=0.44;_eAED=0.52;_QI=0|0.5|0.33|1|0.5|0.33|3|0|145
Chr2 exon 14839727 14839892 14839727 ID=MsG0280007390.01.T01:exon:4119;Parent=MsG0280007390.01.T01
Chr2 exon 14839983 14840131 14839983 ID=MsG0280007390.01.T01:exon:4120;Parent=MsG0280007390.01.T01
Chr2 exon 14842068 14842190 14842068 ID=MsG0280007390.01.T01:exon:4121;Parent=MsG0280007390.01.T01
Chr2 CDS 14839727 14839892 14839727 ID=MsG0280007390.01.T01:cds;Parent=MsG0280007390.01.T01
Chr2 CDS 14839983 14840131 14839983 ID=MsG0280007390.01.T01:cds;Parent=MsG0280007390.01.T01
Chr2 CDS 14842068 14842190 14842068 ID=MsG0280007390.01.T01:cds;Parent=MsG0280007390.01.T01
Gene Sequence

>MsG0280007390.01.T01

ATGTCCTTGCGTGATATTAGGTTGAAGATTGAAAGCAATATGGCAATGTTATGGTTGCAGATGCAGAGAGTCATAAGAAACGGAAGTGTTAATTTGATTTCCACACACCCACATTCTTCGTCTTACTTTTCTTCGAGATCCTACTCCAAATCAACACCCTACGTTGTCAAGGTTGGAATACCGGAATTTTTAAATGGAATTGGAAAGGGAGTCGAATCTCATGTCGCTAAGCTCGATTCCGAAATTGGTGACTTCCAGAAGCTTCTGGTTACTCGAACCCTCAAACTCAAGAAGCTCGGTATTCCTTGCAAACATCTAGTCCACCGGCAAACTTTCTCACAACTAGTTTATCCTTTGCAGAGGAAGCTAATATTGAAACATGCACACAAGTACAGGTTGGGATTATGGAGGCCACGTGGTGAGCCGATCAAAGCATGA
Protein sequence

>MsG0280007390.01.T01

MSLRDIRLKIESNMAMLWLQMQRVIRNGSVNLISTHPHSSSYFSSRSYSKSTPYVVKVGIPEFLNGIGKGVESHVAKLDSEIGDFQKLLVTRTLKLKKLGIPCKHLVHRQTFSQLVYPLQRKLILKHAHKYRLGLWRPRGEPIKA*