Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280007531.01.T01 | XP_003594311.2 | 95.556 | 135 | 3 | 1 | 3 | 134 | 450 | 584 | 1.66E-79 | 255 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280007531.01.T01 | Q9FWW5 | 49.107 | 112 | 55 | 2 | 7 | 116 | 432 | 543 | 1.16E-20 | 89.7 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280007531.01.T01 | Q2HV31 | 95.556 | 135 | 3 | 1 | 3 | 134 | 450 | 584 | 7.92e-80 | 255 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048464.01 | MsG0280007531.01 | 0.813433 | 2.566384e-51 | 1.675746e-48 |
| MsG0180000091.01 | MsG0280007531.01 | 0.823788 | 1.146850e-53 | 9.974024e-51 |
| MsG0180000114.01 | MsG0280007531.01 | 0.807777 | 4.281661e-50 | 2.405956e-47 |
| MsG0180000782.01 | MsG0280007531.01 | 0.806845 | 6.748225e-50 | 3.701342e-47 |
| MsG0180000787.01 | MsG0280007531.01 | 0.808767 | 2.634747e-50 | 1.519418e-47 |
| MsG0180000914.01 | MsG0280007531.01 | 0.809638 | 1.714175e-50 | 1.011870e-47 |
| MsG0180001002.01 | MsG0280007531.01 | 0.804360 | 2.243068e-49 | 1.154210e-46 |
| MsG0180001311.01 | MsG0280007531.01 | 0.801081 | 1.065545e-48 | 5.043220e-46 |
| MsG0180002377.01 | MsG0280007531.01 | 0.807263 | 5.505481e-50 | 3.052627e-47 |
| MsG0180002547.01 | MsG0280007531.01 | 0.807823 | 4.187846e-50 | 2.355991e-47 |
| MsG0180002664.01 | MsG0280007531.01 | 0.804263 | 2.349855e-49 | 1.206098e-46 |
| MsG0180002794.01 | MsG0280007531.01 | 0.805207 | 1.492492e-49 | 7.849277e-47 |
| MsG0180002799.01 | MsG0280007531.01 | 0.828042 | 1.119829e-54 | 1.100375e-51 |
| MsG0180002992.01 | MsG0280007531.01 | 0.819638 | 1.045703e-52 | 8.091799e-50 |
| MsG0180003807.01 | MsG0280007531.01 | 0.811279 | 7.581342e-51 | 4.672990e-48 |
| MsG0180003885.01 | MsG0280007531.01 | 0.825770 | 3.910268e-54 | 3.598143e-51 |
| MsG0180003932.01 | MsG0280007531.01 | 0.809359 | 1.967771e-50 | 1.152957e-47 |
| MsG0180004493.01 | MsG0280007531.01 | 0.831660 | 1.471864e-55 | 1.607832e-52 |
| MsG0180004500.01 | MsG0280007531.01 | 0.841222 | 5.417049e-58 | 7.905518e-55 |
| MsG0180004765.01 | MsG0280007531.01 | 0.815374 | 9.552703e-52 | 6.574571e-49 |
| MsG0180005153.01 | MsG0280007531.01 | 0.824181 | 9.278455e-54 | 8.158305e-51 |
| MsG0180005169.01 | MsG0280007531.01 | 0.826121 | 3.228263e-54 | 3.000217e-51 |
| MsG0180005205.01 | MsG0280007531.01 | 0.836277 | 1.027993e-56 | 1.289437e-53 |
| MsG0180005240.01 | MsG0280007531.01 | 0.803247 | 3.818869e-49 | 1.909654e-46 |
| MsG0180005445.01 | MsG0280007531.01 | 0.843966 | 1.011995e-58 | 1.609834e-55 |
| MsG0180005730.01 | MsG0280007531.01 | 0.827636 | 1.402373e-54 | 1.361545e-51 |
| MsG0180005732.01 | MsG0280007531.01 | 0.806330 | 8.669851e-50 | 4.692850e-47 |
| MsG0180006017.01 | MsG0280007531.01 | 0.816862 | 4.443290e-52 | 3.185202e-49 |
| MsG0180006025.01 | MsG0280007531.01 | 0.801767 | 7.709819e-49 | 3.712515e-46 |
| MsG0180006096.01 | MsG0280007531.01 | 0.844970 | 5.434124e-59 | 8.922057e-56 |
| MsG0180006104.01 | MsG0280007531.01 | 0.829001 | 6.572086e-55 | 6.639825e-52 |
| MsG0180006134.01 | MsG0280007531.01 | 0.804658 | 1.943643e-49 | 1.007843e-46 |
| MsG0180006224.01 | MsG0280007531.01 | 0.801290 | 9.656129e-49 | 4.594262e-46 |
| MsG0280006309.01 | MsG0280007531.01 | 0.814567 | 1.442405e-51 | 9.712483e-49 |
| MsG0280006601.01 | MsG0280007531.01 | 0.820972 | 5.171546e-53 | 4.153515e-50 |
| MsG0280007118.01 | MsG0280007531.01 | 0.826787 | 2.239464e-54 | 2.121218e-51 |
| MsG0280007307.01 | MsG0280007531.01 | 0.817125 | 3.877351e-52 | 2.799550e-49 |
| MsG0280007480.01 | MsG0280007531.01 | 0.800906 | 1.156689e-48 | 5.450493e-46 |
| MsG0280007527.01 | MsG0280007531.01 | 0.805962 | 1.036264e-49 | 5.556793e-47 |
| MsG0280007531.01 | MsG0280007575.01 | 0.800277 | 1.554016e-48 | 7.206596e-46 |
| MsG0280007531.01 | MsG0280007756.01 | 0.808365 | 3.210337e-50 | 1.832202e-47 |
| MsG0280007531.01 | MsG0280008113.01 | 0.832262 | 1.045346e-55 | 1.162145e-52 |
| MsG0280007531.01 | MsG0280008738.01 | 0.822684 | 2.076693e-53 | 1.750443e-50 |
| MsG0280007531.01 | MsG0280008765.01 | 0.849354 | 3.412400e-60 | 6.452218e-57 |
| MsG0280007531.01 | MsG0280009421.01 | 0.829137 | 6.089833e-55 | 6.177941e-52 |
| MsG0280007531.01 | MsG0280010109.01 | 0.800104 | 1.685740e-48 | 7.782881e-46 |
| MsG0280007531.01 | MsG0280010184.01 | 0.838886 | 2.203235e-57 | 2.991523e-54 |
| MsG0280007531.01 | MsG0280010349.01 | 0.843582 | 1.282557e-58 | 2.015953e-55 |
| MsG0280007531.01 | MsG0280010350.01 | 0.842894 | 1.955949e-58 | 3.008164e-55 |
| MsG0280007531.01 | MsG0280010366.01 | 0.839625 | 1.416666e-57 | 1.967607e-54 |
| MsG0280007531.01 | MsG0280010411.01 | 0.840996 | 6.211184e-58 | 9.001216e-55 |
| MsG0280007531.01 | MsG0280010517.01 | 0.841287 | 5.206262e-58 | 7.613361e-55 |
| MsG0280007531.01 | MsG0280010598.01 | 0.824290 | 8.744619e-54 | 7.712228e-51 |
| MsG0280007531.01 | MsG0280010599.01 | 0.849951 | 2.324565e-60 | 4.481565e-57 |
| MsG0280007531.01 | MsG0280010753.01 | 0.808447 | 3.083069e-50 | 1.763332e-47 |
| MsG0280007531.01 | MsG0280010916.01 | 0.817882 | 2.618892e-52 | 1.930545e-49 |
| MsG0280007531.01 | MsG0280011065.01 | 0.830660 | 2.592015e-55 | 2.748713e-52 |
| MsG0280007531.01 | MsG0280011333.01 | 0.840888 | 6.627543e-58 | 9.573805e-55 |
| MsG0280007531.01 | MsG0380011581.01 | 0.807908 | 4.016558e-50 | 2.264578e-47 |
| MsG0280007531.01 | MsG0380011669.01 | 0.811869 | 5.642552e-51 | 3.532737e-48 |
| MsG0280007531.01 | MsG0380011828.01 | 0.807463 | 4.993519e-50 | 2.783194e-47 |
| MsG0280007531.01 | MsG0380012005.01 | 0.801855 | 7.393541e-49 | 3.568462e-46 |
| MsG0280007531.01 | MsG0380012067.01 | 0.808503 | 2.999949e-50 | 1.718240e-47 |
| MsG0280007531.01 | MsG0380012160.01 | 0.815264 | 1.010346e-51 | 6.932670e-49 |
| MsG0280007531.01 | MsG0380013085.01 | 0.804983 | 1.662295e-49 | 8.692363e-47 |
| MsG0280007531.01 | MsG0380013176.01 | 0.816494 | 5.371599e-52 | 3.811870e-49 |
| MsG0280007531.01 | MsG0380013183.01 | 0.811987 | 5.316614e-51 | 3.339382e-48 |
| MsG0280007531.01 | MsG0380014866.01 | 0.800137 | 1.659848e-48 | 7.669831e-46 |
| MsG0280007531.01 | MsG0380014875.01 | 0.804561 | 2.036122e-49 | 1.053148e-46 |
| MsG0280007531.01 | MsG0380014876.01 | 0.803111 | 4.073365e-49 | 2.029769e-46 |
| MsG0280007531.01 | MsG0380014948.01 | 0.841723 | 3.997217e-58 | 5.925206e-55 |
| MsG0280007531.01 | MsG0380014949.01 | 0.839073 | 1.970359e-57 | 2.690638e-54 |
| MsG0280007531.01 | MsG0380015220.01 | 0.830767 | 2.439596e-55 | 2.595371e-52 |
| MsG0280007531.01 | MsG0380015332.01 | 0.803121 | 4.054438e-49 | 2.020868e-46 |
| MsG0280007531.01 | MsG0380015372.01 | 0.800132 | 1.663449e-48 | 7.685620e-46 |
| MsG0280007531.01 | MsG0380016126.01 | 0.809077 | 2.260815e-50 | 1.314677e-47 |
| MsG0280007531.01 | MsG0380016387.01 | 0.829401 | 5.254030e-55 | 5.371915e-52 |
| MsG0280007531.01 | MsG0380016407.01 | 0.817866 | 2.640590e-52 | 1.945696e-49 |
| MsG0280007531.01 | MsG0380016505.01 | 0.814224 | 1.718292e-51 | 1.146241e-48 |
| MsG0280007531.01 | MsG0380016566.01 | 0.815892 | 7.325195e-52 | 5.113206e-49 |
| MsG0280007531.01 | MsG0380017244.01 | 0.822822 | 1.928441e-53 | 1.631891e-50 |
| MsG0280007531.01 | MsG0380017293.01 | 0.813838 | 2.089912e-51 | 1.379660e-48 |
| MsG0280007531.01 | MsG0380017433.01 | 0.808533 | 2.956348e-50 | 1.694553e-47 |
| MsG0280007531.01 | MsG0380017498.01 | 0.816268 | 6.037512e-52 | 4.258364e-49 |
| MsG0280007531.01 | MsG0380017931.01 | 0.805670 | 1.193580e-49 | 6.352481e-47 |
| MsG0280007531.01 | MsG0380018022.01 | 0.818624 | 1.779123e-52 | 1.338512e-49 |
| MsG0280007531.01 | MsG0480018218.01 | 0.817508 | 3.179378e-52 | 2.319926e-49 |
| MsG0280007531.01 | MsG0480018653.01 | 0.800846 | 1.189718e-48 | 5.597491e-46 |
| MsG0280007531.01 | MsG0480018911.01 | 0.812299 | 4.547587e-51 | 2.880656e-48 |
| MsG0280007531.01 | MsG0480019453.01 | 0.822154 | 2.757456e-53 | 2.289259e-50 |
| MsG0280007531.01 | MsG0480020024.01 | 0.842637 | 2.289356e-58 | 3.492541e-55 |
| MsG0280007531.01 | MsG0480020505.01 | 0.803243 | 3.826433e-49 | 1.913215e-46 |
| MsG0280007531.01 | MsG0480020739.01 | 0.802213 | 6.240663e-49 | 3.039472e-46 |
| MsG0280007531.01 | MsG0480020887.01 | 0.819434 | 1.163723e-52 | 8.954312e-50 |
| MsG0280007531.01 | MsG0480021056.01 | 0.852001 | 6.147013e-61 | 1.266501e-57 |
| MsG0280007531.01 | MsG0480021492.01 | 0.836251 | 1.044004e-56 | 1.308530e-53 |
| MsG0280007531.01 | MsG0480021869.01 | 0.800512 | 1.392353e-48 | 6.495201e-46 |
| MsG0280007531.01 | MsG0480021870.01 | 0.845295 | 4.439209e-59 | 7.364099e-56 |
| MsG0280007531.01 | MsG0480022624.01 | 0.810939 | 8.979827e-51 | 5.486360e-48 |
| MsG0280007531.01 | MsG0480022855.01 | 0.819633 | 1.048569e-52 | 8.112777e-50 |
| MsG0280007531.01 | MsG0480023354.01 | 0.824970 | 6.049225e-54 | 5.440998e-51 |
| MsG0280007531.01 | MsG0480023384.01 | 0.817465 | 3.251354e-52 | 2.369683e-49 |
| MsG0280007531.01 | MsG0480023488.01 | 0.819738 | 9.921804e-53 | 7.699332e-50 |
| MsG0280007531.01 | MsG0480023503.01 | 0.802242 | 6.155188e-49 | 3.000149e-46 |
| MsG0280007531.01 | MsG0580024790.01 | -0.801547 | 8.552948e-49 | 4.095717e-46 |
| MsG0280007531.01 | MsG0580024806.01 | 0.814854 | 1.246434e-51 | 8.457585e-49 |
| MsG0280007531.01 | MsG0580025332.01 | 0.842194 | 3.000104e-58 | 4.513564e-55 |
| MsG0280007531.01 | MsG0580025458.01 | 0.806307 | 8.763882e-50 | 4.741010e-47 |
| MsG0280007531.01 | MsG0580025661.01 | 0.812328 | 4.480810e-51 | 2.840672e-48 |
| MsG0280007531.01 | MsG0580025723.01 | 0.800535 | 1.377181e-48 | 6.428213e-46 |
| MsG0280007531.01 | MsG0580025816.01 | 0.838383 | 2.970586e-57 | 3.972145e-54 |
| MsG0280007531.01 | MsG0580025987.01 | 0.816122 | 6.506584e-52 | 4.570842e-49 |
| MsG0280007531.01 | MsG0580027655.01 | 0.803102 | 4.091830e-49 | 2.038467e-46 |
| MsG0280007531.01 | MsG0580027891.01 | 0.821978 | 3.027824e-53 | 2.501155e-50 |
| MsG0280007531.01 | MsG0580028175.01 | 0.807780 | 4.276350e-50 | 2.403153e-47 |
| MsG0280007531.01 | MsG0580029236.01 | 0.828410 | 9.129503e-55 | 9.067356e-52 |
| MsG0280007531.01 | MsG0580029736.01 | 0.820791 | 5.692282e-53 | 4.548219e-50 |
| MsG0280007531.01 | MsG0580029879.01 | 0.816371 | 5.724285e-52 | 4.048748e-49 |
| MsG0280007531.01 | MsG0580029919.01 | 0.823842 | 1.113942e-53 | 9.702121e-51 |
| MsG0280007531.01 | MsG0580030142.01 | 0.854808 | 9.616930e-62 | 2.174566e-58 |
| MsG0280007531.01 | MsG0680030515.01 | 0.829373 | 5.339155e-55 | 5.454700e-52 |
| MsG0280007531.01 | MsG0680030616.01 | 0.835987 | 1.218079e-56 | 1.514343e-53 |
| MsG0280007531.01 | MsG0680030677.01 | 0.808611 | 2.845161e-50 | 1.634056e-47 |
| MsG0280007531.01 | MsG0680030880.01 | 0.802252 | 6.126240e-49 | 2.986814e-46 |
| MsG0280007531.01 | MsG0680031939.01 | 0.802582 | 5.239683e-49 | 2.576040e-46 |
| MsG0280007531.01 | MsG0680033465.01 | 0.837175 | 6.071163e-57 | 7.822642e-54 |
| MsG0280007531.01 | MsG0680034235.01 | 0.848711 | 5.148200e-60 | 9.532506e-57 |
| MsG0280007531.01 | MsG0680035216.01 | 0.806928 | 6.482386e-50 | 3.563035e-47 |
| MsG0280007531.01 | MsG0680035580.01 | 0.842765 | 2.117676e-58 | 3.243509e-55 |
| MsG0280007531.01 | MsG0680035877.01 | 0.802536 | 5.355126e-49 | 2.629732e-46 |
| MsG0280007531.01 | MsG0780035937.01 | 0.801257 | 9.804699e-49 | 4.661104e-46 |
| MsG0280007531.01 | MsG0780036183.01 | 0.800414 | 1.457308e-48 | 6.781746e-46 |
| MsG0280007531.01 | MsG0780036602.01 | 0.850292 | 1.866418e-60 | 3.638538e-57 |
| MsG0280007531.01 | MsG0780036659.01 | 0.810679 | 1.022321e-50 | 6.202369e-48 |
| MsG0280007531.01 | MsG0780037123.01 | 0.819909 | 9.066763e-53 | 7.069729e-50 |
| MsG0280007531.01 | MsG0780037292.01 | 0.809930 | 1.483040e-50 | 8.821486e-48 |
| MsG0280007531.01 | MsG0780038377.01 | 0.822653 | 2.111733e-53 | 1.778441e-50 |
| MsG0280007531.01 | MsG0780038378.01 | 0.826807 | 2.215571e-54 | 2.099745e-51 |
| MsG0280007531.01 | MsG0780038439.01 | 0.810267 | 1.254811e-50 | 7.529729e-48 |
| MsG0280007531.01 | MsG0780038907.01 | 0.849750 | 2.646098e-60 | 5.067396e-57 |
| MsG0280007531.01 | MsG0780039155.01 | 0.801016 | 1.098478e-48 | 5.190773e-46 |
| MsG0280007531.01 | MsG0780039257.01 | 0.810826 | 9.502412e-51 | 5.787749e-48 |
| MsG0280007531.01 | MsG0780039369.01 | 0.824979 | 6.017920e-54 | 5.414335e-51 |
| MsG0280007531.01 | MsG0780039443.01 | 0.839818 | 1.261723e-57 | 1.762985e-54 |
| MsG0280007531.01 | MsG0780040254.01 | 0.802205 | 6.264433e-49 | 3.050367e-46 |
| MsG0280007531.01 | MsG0780040430.01 | 0.818114 | 2.320613e-52 | 1.721601e-49 |
| MsG0280007531.01 | MsG0780041187.01 | 0.801371 | 9.292915e-49 | 4.430516e-46 |
| MsG0280007531.01 | MsG0780041210.01 | 0.801551 | 8.536946e-49 | 4.088469e-46 |
| MsG0280007531.01 | MsG0780041229.01 | 0.830549 | 2.758547e-55 | 2.915634e-52 |
| MsG0280007531.01 | MsG0780041258.01 | 0.819898 | 9.117833e-53 | 7.107218e-50 |
| MsG0280007531.01 | MsG0780041305.01 | 0.809778 | 1.598873e-50 | 9.473211e-48 |
| MsG0280007531.01 | MsG0780041387.01 | 0.817287 | 3.566594e-52 | 2.586534e-49 |
| MsG0280007531.01 | MsG0780041435.01 | 0.814881 | 1.229316e-51 | 8.347364e-49 |
| MsG0280007531.01 | MsG0780041440.01 | 0.811695 | 6.155827e-51 | 3.836230e-48 |
| MsG0280007531.01 | MsG0780041475.01 | 0.804168 | 2.458790e-49 | 1.258980e-46 |
| MsG0280007531.01 | MsG0780041634.01 | 0.802756 | 4.824870e-49 | 2.382712e-46 |
| MsG0280007531.01 | MsG0780041734.01 | -0.823311 | 1.482831e-53 | 1.272171e-50 |
| MsG0280007531.01 | MsG0880041854.01 | 0.811436 | 7.009291e-51 | 4.338658e-48 |
| MsG0280007531.01 | MsG0880042324.01 | 0.832100 | 1.145887e-55 | 1.267993e-52 |
| MsG0280007531.01 | MsG0880042520.01 | 0.800745 | 1.247823e-48 | 5.855499e-46 |
| MsG0280007531.01 | MsG0880042656.01 | 0.802135 | 6.475109e-49 | 3.147447e-46 |
| MsG0280007531.01 | MsG0880042700.01 | 0.829066 | 6.338511e-55 | 6.416200e-52 |
| MsG0280007531.01 | MsG0880043430.01 | 0.802697 | 4.961701e-49 | 2.446600e-46 |
| MsG0280007531.01 | MsG0880043480.01 | 0.809721 | 1.645321e-50 | 9.733345e-48 |
| MsG0280007531.01 | MsG0880044131.01 | 0.849055 | 4.132272e-60 | 7.737758e-57 |
| MsG0280007531.01 | MsG0880044948.01 | 0.801835 | 7.466317e-49 | 3.601601e-46 |
| MsG0280007531.01 | MsG0880045294.01 | 0.817107 | 3.914972e-52 | 2.825284e-49 |
| MsG0280007531.01 | MsG0880045387.01 | 0.810918 | 9.075054e-51 | 5.541328e-48 |
| MsG0280007531.01 | MsG0880045765.01 | 0.808428 | 3.112872e-50 | 1.779426e-47 |
| MsG0280007531.01 | MsG0880046516.01 | 0.806696 | 7.256707e-50 | 3.964736e-47 |
| MsG0280007531.01 | MsG0880046572.01 | 0.812196 | 4.787083e-51 | 3.024054e-48 |
| MsG0280007531.01 | MsG0880046901.01 | 0.802310 | 5.960561e-49 | 2.910469e-46 |
| MsG0280007531.01 | MsG0880047055.01 | -0.805815 | 1.112323e-49 | 5.942236e-47 |
| MsG0280007531.01 | MsG0880047135.01 | 0.826302 | 2.923208e-54 | 2.730808e-51 |
| MsG0280007531.01 | MsG0880047252.01 | 0.817743 | 2.815448e-52 | 2.067602e-49 |
| MsG0280007531.01 | MsG0880047696.01 | 0.821708 | 3.498127e-53 | 2.867644e-50 |
| MsG0280007531.01 | MsG0880047754.01 | 0.824302 | 8.686663e-54 | 7.663879e-51 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280007531.01.T01 | MTR_2g027130 | 95.556 | 135 | 3 | 1 | 3 | 134 | 450 | 584 | 2.01e-83 | 255 |
| MsG0280007531.01.T01 | MTR_4g133450 | 45.238 | 126 | 61 | 1 | 6 | 131 | 197 | 314 | 1.87e-30 | 111 |
| MsG0280007531.01.T01 | MTR_4g134110 | 46.032 | 126 | 60 | 1 | 6 | 131 | 433 | 550 | 2.91e-30 | 114 |
| MsG0280007531.01.T01 | MTR_3g060660 | 43.396 | 106 | 60 | 0 | 13 | 118 | 465 | 570 | 1.97e-19 | 83.6 |
| MsG0280007531.01.T01 | MTR_3g060660 | 43.396 | 106 | 60 | 0 | 13 | 118 | 454 | 559 | 3.13e-19 | 82.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280007531.01.T01 | AT1G12150 | 49.107 | 112 | 55 | 2 | 7 | 116 | 432 | 543 | 1.19e-21 | 89.7 |
| MsG0280007531.01.T01 | AT1G12150 | 49.107 | 112 | 55 | 2 | 7 | 116 | 432 | 543 | 1.19e-21 | 89.7 |
| MsG0280007531.01.T01 | AT4G17210 | 40.541 | 111 | 66 | 0 | 3 | 113 | 413 | 523 | 5.46e-19 | 82.0 |
Find 16 sgRNAs with CRISPR-Local
Find 17 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATAAAAGCAGCAACAGATT+TGG | 0.368777 | 2:+16692048 | MsG0280007531.01.T01:CDS |
| TTCTAGCTCTGCAGCGAGAT+TGG | 0.424207 | 2:-16692184 | None:intergenic |
| TGGCGTCAAGAAGAACAAAA+AGG | 0.451952 | 2:+16692133 | MsG0280007531.01.T01:CDS |
| TCAGCAAAACTAGCAGTTGA+AGG | 0.511221 | 2:+16692097 | MsG0280007531.01.T01:CDS |
| AGAAACAACTGCAATGGCTC+AGG | 0.523434 | 2:+16691955 | MsG0280007531.01.T01:CDS |
| GATGAATTTGCTGCTCTAAG+TGG | 0.529272 | 2:+16691896 | MsG0280007531.01.T01:CDS |
| GGCTCTGAGGAATGCAGAGA+TGG | 0.535386 | 2:+16692069 | MsG0280007531.01.T01:CDS |
| AACAACTGCAATGGCTCAGG+TGG | 0.549356 | 2:+16691958 | MsG0280007531.01.T01:CDS |
| CTTACCACTGGAATCAGAAA+CGG | 0.572360 | 2:-16691858 | None:intergenic |
| TGTCAACACGATCTTACCAC+TGG | 0.594761 | 2:-16691870 | None:intergenic |
| AATGTGAAGATTTGATTGAG+AGG | 0.600637 | 2:+16691930 | MsG0280007531.01.T01:CDS |
| CAGCAACAGATTTGGCTCTG+AGG | 0.613910 | 2:+16692056 | MsG0280007531.01.T01:CDS |
| GAGGACAGAAACAACTGCAA+TGG | 0.637220 | 2:+16691949 | MsG0280007531.01.T01:CDS |
| GTCTCCGTTTCTGATTCCAG+TGG | 0.639257 | 2:+16691854 | MsG0280007531.01.T01:CDS |
| TTGAAGGTGAATTAAAGAAG+TGG | 0.644395 | 2:+16692113 | MsG0280007531.01.T01:CDS |
| AAGTTGTTGTCTGACGCACA+AGG | 0.705883 | 2:+16691827 | MsG0280007531.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| AATAAAAGCAGCAACAGATT+TGG | + | Chr2:16692048-16692067 | MsG0280007531.01.T01:CDS | 30.0% | |
| AATGTGAAGATTTGATTGAG+AGG | + | Chr2:16691930-16691949 | MsG0280007531.01.T01:CDS | 30.0% | |
| ACAAAAAGGTTTGGATTTGT+CGG | + | Chr2:16692147-16692166 | MsG0280007531.01.T01:CDS | 30.0% | |
| TCAAGAAGAACAAAAAGGTT+TGG | + | Chr2:16692138-16692157 | MsG0280007531.01.T01:CDS | 30.0% | |
| TTGAAGGTGAATTAAAGAAG+TGG | + | Chr2:16692113-16692132 | MsG0280007531.01.T01:CDS | 30.0% | |
| CTTACCACTGGAATCAGAAA+CGG | - | Chr2:16691861-16691880 | None:intergenic | 40.0% | |
| TCAGCAAAACTAGCAGTTGA+AGG | + | Chr2:16692097-16692116 | MsG0280007531.01.T01:CDS | 40.0% | |
| TGGCGTCAAGAAGAACAAAA+AGG | + | Chr2:16692133-16692152 | MsG0280007531.01.T01:CDS | 40.0% | |
| !! | GATGAATTTGCTGCTCTAAG+TGG | + | Chr2:16691896-16691915 | MsG0280007531.01.T01:CDS | 40.0% |
| AAGTTGTTGTCTGACGCACA+AGG | + | Chr2:16691827-16691846 | MsG0280007531.01.T01:CDS | 45.0% | |
| AGAAACAACTGCAATGGCTC+AGG | + | Chr2:16691955-16691974 | MsG0280007531.01.T01:CDS | 45.0% | |
| GAGGACAGAAACAACTGCAA+TGG | + | Chr2:16691949-16691968 | MsG0280007531.01.T01:CDS | 45.0% | |
| TGTCAACACGATCTTACCAC+TGG | - | Chr2:16691873-16691892 | None:intergenic | 45.0% | |
| AACAACTGCAATGGCTCAGG+TGG | + | Chr2:16691958-16691977 | MsG0280007531.01.T01:CDS | 50.0% | |
| GTCTCCGTTTCTGATTCCAG+TGG | + | Chr2:16691854-16691873 | MsG0280007531.01.T01:CDS | 50.0% | |
| !! | CAGCAACAGATTTGGCTCTG+AGG | + | Chr2:16692056-16692075 | MsG0280007531.01.T01:CDS | 50.0% |
| !! | GGCTCTGAGGAATGCAGAGA+TGG | + | Chr2:16692069-16692088 | MsG0280007531.01.T01:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr2 | gene | 16691800 | 16692204 | 16691800 | ID=MsG0280007531.01;Name=MsG0280007531.01 |
| Chr2 | mRNA | 16691800 | 16692204 | 16691800 | ID=MsG0280007531.01.T01;Parent=MsG0280007531.01;Name=MsG0280007531.01.T01;_AED=0.49;_eAED=0.49;_QI=0|-1|0|1|-1|1|1|0|134 |
| Chr2 | exon | 16691800 | 16692204 | 16691800 | ID=MsG0280007531.01.T01:exon:1311;Parent=MsG0280007531.01.T01 |
| Chr2 | CDS | 16691800 | 16692204 | 16691800 | ID=MsG0280007531.01.T01:cds;Parent=MsG0280007531.01.T01 |
| Gene Sequence |
| Protein sequence |