AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180000114.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180000114.01.T01 MTR_1g023140 95.763 118 5 0 31 148 3 120 5.61e-78 227
MsG0180000114.01.T01 MTR_3g112410 82.727 110 19 0 31 140 3 112 3.18e-63 189
MsG0180000114.01.T01 MTR_5g021180 67.593 108 35 0 33 140 7 114 1.13e-52 163
MsG0180000114.01.T01 MTR_7g009070 51.961 102 49 0 40 141 32 133 3.67e-37 124
MsG0180000114.01.T01 MTR_8g107460 50.926 108 53 0 33 140 253 360 4.44e-36 127
MsG0180000114.01.T01 MTR_8g006685 37.500 128 80 0 10 137 71 198 1.02e-32 115
MsG0180000114.01.T01 MTR_8g006560 37.500 128 80 0 10 137 71 198 1.02e-32 115
MsG0180000114.01.T01 MTR_8g005320 38.136 118 73 0 20 137 12 129 4.87e-32 111
MsG0180000114.01.T01 MTR_7g073680 40.708 113 66 1 22 134 13 124 1.24e-29 105
MsG0180000114.01.T01 MTR_5g037930 40.800 125 74 0 18 142 4 128 2.92e-28 101
MsG0180000114.01.T01 MTR_3g112400 53.465 101 27 3 30 130 1 81 7.20e-27 96.7
MsG0180000114.01.T01 MTR_5g037950 46.226 106 57 0 36 141 21 126 1.16e-26 97.4
MsG0180000114.01.T01 MTR_2g010750 39.474 114 69 0 34 147 9 122 2.37e-26 96.7
MsG0180000114.01.T01 MTR_5g037890 43.119 109 62 0 34 142 18 126 7.78e-25 92.8
MsG0180000114.01.T01 MTR_2g082590 33.613 119 79 0 26 144 2 120 7.13e-22 85.1
MsG0180000114.01.T01 MTR_4g094690 38.298 94 56 1 37 128 62 155 2.58e-20 82.4
MsG0180000114.01.T01 MTR_4g081380 36.634 101 64 0 33 133 9 109 4.30e-20 80.5
MsG0180000114.01.T01 MTR_2g082590 40.230 87 52 0 58 144 47 133 6.27e-19 77.8
MsG0180000114.01.T01 MTR_1g098660 39.474 76 45 1 54 128 76 151 7.97e-18 75.9
MsG0180000114.01.T01 MTR_3g089065 35.780 109 65 3 37 143 70 175 5.63e-17 73.6
MsG0180000114.01.T01 MTR_7g080250 39.048 105 60 2 34 137 75 176 7.70e-16 70.9
MsG0180000114.01.T01 MTR_6g092700 31.858 113 72 3 34 143 75 185 1.37e-15 70.9
MsG0180000114.01.T01 MTR_7g102130 33.721 86 55 1 55 140 44 127 3.65e-14 65.1
MsG0180000114.01.T01 MTR_2g079420 39.474 76 45 1 54 128 84 159 5.27e-14 65.9
MsG0180000114.01.T01 MTR_1g114290 38.636 88 47 3 55 141 85 166 2.38e-13 64.3
MsG0180000114.01.T01 MTR_8g059015 36.364 88 54 2 54 139 87 174 3.15e-13 63.9
MsG0180000114.01.T01 MTR_2g010750 33.750 80 49 1 23 102 2 77 4.31e-13 61.6
MsG0180000114.01.T01 MTR_3g435370 28.829 111 74 3 33 140 86 194 7.00e-13 64.3
MsG0180000114.01.T01 MTR_3g435370 28.829 111 74 3 33 140 86 194 9.98e-13 63.9
MsG0180000114.01.T01 MTR_4g088905 32.075 106 68 1 34 139 3 104 6.38e-12 62.4
MsG0180000114.01.T01 MTR_2g079340 35.135 74 47 1 55 127 51 124 1.90e-11 58.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180000114.01.T01 AT3G51030 68.519 108 34 0 33 140 5 112 1.62e-55 170
MsG0180000114.01.T01 AT1G45145 59.459 111 45 0 30 140 1 111 7.33e-48 150
MsG0180000114.01.T01 AT5G42980 59.829 117 47 0 30 146 1 117 1.96e-47 149
MsG0180000114.01.T01 AT1G19730 57.265 117 49 1 31 146 3 119 7.33e-43 138
MsG0180000114.01.T01 AT3G17880 40.984 122 70 1 21 140 248 369 3.41e-32 117
MsG0180000114.01.T01 AT3G17880 40.984 122 70 1 21 140 255 376 4.39e-32 117
MsG0180000114.01.T01 AT5G39950 40.164 122 73 0 20 141 11 132 3.47e-31 108
MsG0180000114.01.T01 AT3G56420 42.308 104 60 0 31 134 37 140 2.77e-30 107
MsG0180000114.01.T01 AT3G56420 42.308 104 60 0 31 134 37 140 2.77e-30 107
MsG0180000114.01.T01 AT3G56420 42.308 104 60 0 31 134 37 140 2.77e-30 107
MsG0180000114.01.T01 AT1G59730 38.525 122 75 0 20 141 7 128 2.53e-29 104
MsG0180000114.01.T01 AT3G08710 39.048 105 64 0 34 138 23 127 8.95e-29 103
MsG0180000114.01.T01 AT3G08710 39.048 105 64 0 34 138 23 127 8.95e-29 103
MsG0180000114.01.T01 AT3G08710 39.048 105 64 0 34 138 23 127 8.95e-29 103
MsG0180000114.01.T01 AT1G69880 37.963 108 67 0 36 143 39 146 5.40e-27 99.0
MsG0180000114.01.T01 AT2G40790 41.176 102 60 0 33 134 39 140 5.05e-26 96.7
MsG0180000114.01.T01 AT2G40790 41.176 102 60 0 33 134 39 140 5.05e-26 96.7
MsG0180000114.01.T01 AT1G11530 40.594 101 60 0 34 134 2 102 5.00e-23 87.8
MsG0180000114.01.T01 AT2G35010 38.318 107 64 1 31 135 81 187 1.25e-20 84.0
MsG0180000114.01.T01 AT2G35010 38.318 107 64 1 31 135 81 187 1.25e-20 84.0
MsG0180000114.01.T01 AT1G43560 36.667 90 51 2 54 137 74 163 2.53e-17 74.3
MsG0180000114.01.T01 AT1G76760 38.158 76 46 1 54 128 79 154 1.26e-16 72.8
MsG0180000114.01.T01 AT4G26160 32.743 113 71 3 32 141 91 201 4.27e-16 72.4
MsG0180000114.01.T01 AT1G31020 38.372 86 51 1 44 127 59 144 7.51e-16 70.5
MsG0180000114.01.T01 AT5G16400 41.463 82 47 1 57 137 98 179 8.18e-16 70.9
MsG0180000114.01.T01 AT3G02730 38.636 88 53 1 57 143 88 175 1.31e-15 70.5
MsG0180000114.01.T01 AT1G03680 31.250 112 70 4 32 139 69 177 2.97e-13 63.9
MsG0180000114.01.T01 AT3G15360 36.145 83 51 2 59 139 107 189 5.79e-13 63.5
MsG0180000114.01.T01 AT4G32580 32.979 94 63 0 46 139 11 104 8.24e-13 62.4
MsG0180000114.01.T01 AT4G03520 33.735 83 53 2 59 139 101 183 1.00e-11 60.1
MsG0180000114.01.T01 AT4G29670 28.916 83 57 1 35 117 104 184 1.27e-11 60.5
MsG0180000114.01.T01 AT4G04950 32.979 94 63 0 46 139 11 104 1.35e-11 61.6
MsG0180000114.01.T01 AT3G53220 31.395 86 57 1 55 140 42 125 1.36e-11 58.5
MsG0180000114.01.T01 AT4G29670 28.916 83 57 1 35 117 104 184 1.77e-11 60.1

Find 32 sgRNAs with CRISPR-Local

Find 100 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTAGCAATCTCAGCTAGAAT+TGG 0.355652 1:-1642165 None:intergenic
AGAAGGTAAGGAAGTGGATA+AGG 0.412033 1:+1642602 MsG0180000114.01.T01:CDS
ACCTTCTTGTTCTTGAAAGA+AGG 0.429557 1:+1642585 MsG0180000114.01.T01:CDS
CTTGTTCTTGAAAGAAGGTA+AGG 0.442943 1:+1642590 MsG0180000114.01.T01:CDS
ACCTTGAGGAAGATGACTTC+AGG 0.460006 1:-1642195 None:intergenic
AAATGCAATCACCAAGCATA+AGG 0.488265 1:+1642653 MsG0180000114.01.T01:CDS
AAGGAAGTGGATAAGGTAGT+TGG 0.491604 1:+1642609 MsG0180000114.01.T01:CDS
AACAGTTGCCTCCTTATGCT+TGG 0.495535 1:-1642664 None:intergenic
TTCAGACTGTTGCTGAGGAA+TGG 0.506641 1:+1642544 MsG0180000114.01.T01:intron
GGTGGATATTGATGAAGTAA+AGG 0.509236 1:+1642215 MsG0180000114.01.T01:CDS
CTAGAATTGGAGCAATAAAA+CGG 0.524722 1:-1642152 None:intergenic
CTTGAAAGAAGGTAAGGAAG+TGG 0.537499 1:+1642596 MsG0180000114.01.T01:CDS
TGGATAAGGTAGTTGGTGCT+AGG 0.544910 1:+1642616 MsG0180000114.01.T01:CDS
ACCTTCTTTCAAGAACAAGA+AGG 0.546615 1:-1642586 None:intergenic
TGGTGCTAGGAAAGAAGAGC+TGG 0.551903 1:+1642629 MsG0180000114.01.T01:CDS
TCTTTCAAGAACAAGAAGGT+TGG 0.561956 1:-1642582 None:intergenic
CTCCTCCTTCCACTGTTCAA+CGG 0.563671 1:-1640754 None:intergenic
ACCTGAAGTCATCTTCCTCA+AGG 0.580195 1:+1642194 MsG0180000114.01.T01:CDS
GCAGCTGAAGGACAGGTGAT+CGG 0.598988 1:+1640723 MsG0180000114.01.T01:CDS
GTGGAAGGAGGAGATCCAGA+AGG 0.606920 1:+1640764 MsG0180000114.01.T01:CDS
TGGAAGGAGGAGATCCAGAA+GGG 0.610530 1:+1640765 MsG0180000114.01.T01:CDS
AATAATATAATAGATTGTGG+TGG 0.611417 1:+1642101 MsG0180000114.01.T01:intron
CTTCATCAATATCCACCTTG+AGG 0.619089 1:-1642209 None:intergenic
TCATACCGTTGAACAGTGGA+AGG 0.620633 1:+1640749 MsG0180000114.01.T01:CDS
CCTATTTCAGACTGTTGCTG+AGG 0.625837 1:+1642539 MsG0180000114.01.T01:intron
TGCAATCACCAAGCATAAGG+AGG 0.627086 1:+1642656 MsG0180000114.01.T01:CDS
ATTGGAGCAATAAAACGGCA+TGG 0.627618 1:-1642147 None:intergenic
TACCGTTGAACAGTGGAAGG+AGG 0.648899 1:+1640752 MsG0180000114.01.T01:CDS
TGCTGAGGAATGGTCTGTTG+AGG 0.656277 1:+1642554 MsG0180000114.01.T01:CDS
TGAAGTCATCTTCCTCAAGG+TGG 0.658466 1:+1642197 MsG0180000114.01.T01:CDS
GTGTTCATACCGTTGAACAG+TGG 0.666984 1:+1640745 MsG0180000114.01.T01:CDS
AATATTATAAGAATGAGGCA+TGG 0.676323 1:+1640621 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAAATAAACTCTAAACAA+GGG + Chr1:1641641-1641660 MsG0180000114.01.T01:intron 15.0%
!! TTGAATAATATAATAGATTG+TGG + Chr1:1642098-1642117 MsG0180000114.01.T01:intron 15.0%
!!! AAACATGTTTCTAATATTTT+TGG + Chr1:1642445-1642464 MsG0180000114.01.T01:intron 15.0%
!!! ACAATTTTGTTTTTCATTAT+TGG - Chr1:1641346-1641365 None:intergenic 15.0%
!!! ATGTATATTTTAGTGTATTT+GGG + Chr1:1641011-1641030 MsG0180000114.01.T01:intron 15.0%
!!! TAATCAGTTTTCATAATATA+AGG + Chr1:1641470-1641489 MsG0180000114.01.T01:intron 15.0%
!! AATAATATAATAGATTGTGG+TGG + Chr1:1642101-1642120 MsG0180000114.01.T01:intron 20.0%
!! ATAAAGGTGGTTATAAATTA+AGG - Chr1:1641948-1641967 None:intergenic 20.0%
!! ATTAAACTTGAGAAAGAATA+AGG - Chr1:1642266-1642285 None:intergenic 20.0%
!! CAAATTACTTATATATACTC+TGG - Chr1:1641412-1641431 None:intergenic 20.0%
!! CAGAGTATATATAAGTAATT+TGG + Chr1:1641410-1641429 MsG0180000114.01.T01:intron 20.0%
!! CATAAAATAAACTCTAAACA+AGG + Chr1:1641640-1641659 MsG0180000114.01.T01:intron 20.0%
!! TCTTCGTGTATTATATTATA+GGG - Chr1:1641529-1641548 None:intergenic 20.0%
!! TTCTTCGTGTATTATATTAT+AGG - Chr1:1641530-1641549 None:intergenic 20.0%
!!! ATGTTTCTAATATTTTTGGA+TGG + Chr1:1642449-1642468 MsG0180000114.01.T01:intron 20.0%
!!! CAACAAAGAATTTATTTTGT+TGG + Chr1:1641877-1641896 MsG0180000114.01.T01:intron 20.0%
!!! CATAATTTGCCATTTTTATA+TGG + Chr1:1641749-1641768 MsG0180000114.01.T01:intron 20.0%
!!! CATGTATATTTTAGTGTATT+TGG + Chr1:1641010-1641029 MsG0180000114.01.T01:intron 20.0%
!!! CTTGTTTAGAGTTTATTTTA+TGG - Chr1:1641642-1641661 None:intergenic 20.0%
!!! TATAGGGTTAATTATGTTTT+TGG - Chr1:1641513-1641532 None:intergenic 20.0%
! AAAAAAACTAACCTAGAGAA+TGG - Chr1:1641669-1641688 None:intergenic 25.0%
! AAATTACTAAGTTAGTGTCA+CGG - Chr1:1641832-1641851 None:intergenic 25.0%
! AGGCTAATAATAACATTGAA+AGG - Chr1:1641803-1641822 None:intergenic 25.0%
! ATGATTATGACATTCATATG+TGG - Chr1:1641588-1641607 None:intergenic 25.0%
! CAAAACAAATAAGCACATAA+AGG - Chr1:1641964-1641983 None:intergenic 25.0%
! GTTTGCGATGATATATTATA+TGG + Chr1:1641133-1641152 MsG0180000114.01.T01:intron 25.0%
! TGATCATAAGAAACAAAACA+CGG - Chr1:1642405-1642424 None:intergenic 25.0%
! TGTTAAAACCCTAATTATAG+TGG + Chr1:1641167-1641186 MsG0180000114.01.T01:intron 25.0%
! TTCGAAAGAAGAGAAAAAAA+TGG + Chr1:1640701-1640720 MsG0180000114.01.T01:CDS 25.0%
!! CTTTTGGATCAAAATATATG+TGG - Chr1:1640911-1640930 None:intergenic 25.0%
!! GAACAATTCATAAACACTTT+TGG - Chr1:1640927-1640946 None:intergenic 25.0%
!!! TATTTTGACCATACTTTAGT+AGG - Chr1:1641196-1641215 None:intergenic 25.0%
!!! TTTGATGAATACCAGTTTTT+TGG - Chr1:1640799-1640818 None:intergenic 25.0%
AAACAAGTCTTAAACCGATT+CGG + Chr1:1642516-1642535 MsG0180000114.01.T01:intron 30.0%
AACAAATAAGCACATAAAGG+TGG - Chr1:1641961-1641980 None:intergenic 30.0%
AGATAGTCTCATAACTGATT+TGG + Chr1:1641104-1641123 MsG0180000114.01.T01:intron 30.0%
AGTAGGAAACCACTATAATT+AGG - Chr1:1641179-1641198 None:intergenic 30.0%
CATACTGGACCATATAAAAA+TGG - Chr1:1641761-1641780 None:intergenic 30.0%
CTAGAATTGGAGCAATAAAA+CGG - Chr1:1642155-1642174 None:intergenic 30.0%
GTAGGAAACCACTATAATTA+GGG - Chr1:1641178-1641197 None:intergenic 30.0%
TAATTTAACCGTCAAACCTA+TGG + Chr1:1641214-1641233 MsG0180000114.01.T01:intron 30.0%
! ATATAAGGTCGCAATTTTGT+AGG + Chr1:1641485-1641504 MsG0180000114.01.T01:intron 30.0%
! TATAAGGTCGCAATTTTGTA+GGG + Chr1:1641486-1641505 MsG0180000114.01.T01:intron 30.0%
! TTTTATGGCACACAAGTATT+TGG - Chr1:1641627-1641646 None:intergenic 30.0%
!! TAATTAGGGTTTTAACACTG+TGG - Chr1:1641164-1641183 None:intergenic 30.0%
AAATGCAATCACCAAGCATA+AGG + Chr1:1642653-1642672 MsG0180000114.01.T01:CDS 35.0%
ACCTTCTTGTTCTTGAAAGA+AGG + Chr1:1642585-1642604 MsG0180000114.01.T01:CDS 35.0%
ACCTTCTTTCAAGAACAAGA+AGG - Chr1:1642589-1642608 None:intergenic 35.0%
AGTGGTTTCCTACTAAAGTA+TGG + Chr1:1641185-1641204 MsG0180000114.01.T01:intron 35.0%
CTTGTTCTTGAAAGAAGGTA+AGG + Chr1:1642590-1642609 MsG0180000114.01.T01:CDS 35.0%
GGTGGATATTGATGAAGTAA+AGG + Chr1:1642215-1642234 MsG0180000114.01.T01:CDS 35.0%
TCTTTCAAGAACAAGAAGGT+TGG - Chr1:1642585-1642604 None:intergenic 35.0%
TTAGCAATCTCAGCTAGAAT+TGG - Chr1:1642168-1642187 None:intergenic 35.0%
! TAACGCAAGTTTGTTCATAC+TGG - Chr1:1641776-1641795 None:intergenic 35.0%
AAGGAAGTGGATAAGGTAGT+TGG + Chr1:1642609-1642628 MsG0180000114.01.T01:CDS 40.0%
AATATTGCCCTAGATCATCG+TGG + Chr1:1640963-1640982 MsG0180000114.01.T01:intron 40.0%
AGAAGGTAAGGAAGTGGATA+AGG + Chr1:1642602-1642621 MsG0180000114.01.T01:CDS 40.0%
ATTGGAGCAATAAAACGGCA+TGG - Chr1:1642150-1642169 None:intergenic 40.0%
CTTCATCAATATCCACCTTG+AGG - Chr1:1642212-1642231 None:intergenic 40.0%
CTTGAAAGAAGGTAAGGAAG+TGG + Chr1:1642596-1642615 MsG0180000114.01.T01:CDS 40.0%
GAGAAAAAAATGGCAGCTGA+AGG + Chr1:1640711-1640730 MsG0180000114.01.T01:CDS 40.0%
GGGAAATGACTCCAAAAAAC+TGG + Chr1:1640785-1640804 MsG0180000114.01.T01:CDS 40.0%
TTAGACCGCAACTTAAAGCT+CGG - Chr1:1641058-1641077 None:intergenic 40.0%
! GATTTTACTGCTTCATGGTG+TGG + Chr1:1642123-1642142 MsG0180000114.01.T01:CDS 40.0%
!! AAACAAGGGTACCATTCTCT+AGG + Chr1:1641655-1641674 MsG0180000114.01.T01:intron 40.0%
!! AGTTAGTGTCACGGTTTTAG+AGG - Chr1:1641823-1641842 None:intergenic 40.0%
!! TTAGGGTTTTAACACTGTGG+TGG - Chr1:1641161-1641180 None:intergenic 40.0%
!!! TGGTGGATTTTACTGCTTCA+TGG + Chr1:1642118-1642137 MsG0180000114.01.T01:CDS 40.0%
!!! TTTTGGAGTCATTTCCCTTC+TGG - Chr1:1640782-1640801 None:intergenic 40.0%
AAAAATGGCAGCTGAAGGAC+AGG + Chr1:1640716-1640735 MsG0180000114.01.T01:CDS 45.0%
AACACTGTCCACGATGATCT+AGG - Chr1:1640974-1640993 None:intergenic 45.0%
AACAGTTGCCTCCTTATGCT+TGG - Chr1:1642667-1642686 None:intergenic 45.0%
ACACTGTCCACGATGATCTA+GGG - Chr1:1640973-1640992 None:intergenic 45.0%
ACCTGAAGTCATCTTCCTCA+AGG + Chr1:1642194-1642213 MsG0180000114.01.T01:CDS 45.0%
ACCTTGAGGAAGATGACTTC+AGG - Chr1:1642198-1642217 None:intergenic 45.0%
CCTATTTCAGACTGTTGCTG+AGG + Chr1:1642539-1642558 MsG0180000114.01.T01:intron 45.0%
CTATCTCCTCTTGTGTGCTT+AGG - Chr1:1641090-1641109 None:intergenic 45.0%
CTTGTGCACCATAGGTTTGA+CGG - Chr1:1641225-1641244 None:intergenic 45.0%
GTGTTCATACCGTTGAACAG+TGG + Chr1:1640745-1640764 MsG0180000114.01.T01:CDS 45.0%
TAGACCGCAACTTAAAGCTC+GGG - Chr1:1641057-1641076 None:intergenic 45.0%
TCATACCGTTGAACAGTGGA+AGG + Chr1:1640749-1640768 MsG0180000114.01.T01:CDS 45.0%
TCCTCTTGTGTGCTTAGGTT+CGG - Chr1:1641085-1641104 None:intergenic 45.0%
TGAAGTCATCTTCCTCAAGG+TGG + Chr1:1642197-1642216 MsG0180000114.01.T01:CDS 45.0%
TGCAATCACCAAGCATAAGG+AGG + Chr1:1642656-1642675 MsG0180000114.01.T01:CDS 45.0%
TTCAGACTGTTGCTGAGGAA+TGG + Chr1:1642544-1642563 MsG0180000114.01.T01:intron 45.0%
TTGTCTCACTTGTGCACCAT+AGG - Chr1:1641233-1641252 None:intergenic 45.0%
! CAGTCTGAAATAGGCCGAAT+CGG - Chr1:1642533-1642552 None:intergenic 45.0%
! CCTCAGCAACAGTCTGAAAT+AGG - Chr1:1642542-1642561 None:intergenic 45.0%
! TGGATAAGGTAGTTGGTGCT+AGG + Chr1:1642616-1642635 MsG0180000114.01.T01:CDS 45.0%
!! ATCACCCGAGCTTTAAGTTG+CGG + Chr1:1641050-1641069 MsG0180000114.01.T01:intron 45.0%
AAGCTTACCGTTGTAGCACG+CGG + Chr1:1642335-1642354 MsG0180000114.01.T01:intron 50.0%
AGAATCACCGCGTGCTACAA+CGG - Chr1:1642345-1642364 None:intergenic 50.0%
CTCCTCCTTCCACTGTTCAA+CGG - Chr1:1640757-1640776 None:intergenic 50.0%
TACCGTTGAACAGTGGAAGG+AGG + Chr1:1640752-1640771 MsG0180000114.01.T01:CDS 50.0%
TCCGAACCTAAGCACACAAG+AGG + Chr1:1641081-1641100 MsG0180000114.01.T01:intron 50.0%
TGCTGAGGAATGGTCTGTTG+AGG + Chr1:1642554-1642573 MsG0180000114.01.T01:CDS 50.0%
TGGAAGGAGGAGATCCAGAA+GGG + Chr1:1640765-1640784 MsG0180000114.01.T01:CDS 50.0%
! TGGTGCTAGGAAAGAAGAGC+TGG + Chr1:1642629-1642648 MsG0180000114.01.T01:CDS 50.0%
GCAGCTGAAGGACAGGTGAT+CGG + Chr1:1640723-1640742 MsG0180000114.01.T01:CDS 55.0%
GTGGAAGGAGGAGATCCAGA+AGG + Chr1:1640764-1640783 MsG0180000114.01.T01:CDS 55.0%
Chromosome Type Strat End Strand Name
Chr1 gene 1640633 1642698 1640633 ID=MsG0180000114.01;Name=MsG0180000114.01
Chr1 mRNA 1640633 1642698 1640633 ID=MsG0180000114.01.T01;Parent=MsG0180000114.01;Name=MsG0180000114.01.T01;_AED=0.42;_eAED=0.54;_QI=0|0|0|1|1|1|3|0|148
Chr1 exon 1640633 1640806 1640633 ID=MsG0180000114.01.T01:exon:7159;Parent=MsG0180000114.01.T01
Chr1 exon 1642114 1642236 1642114 ID=MsG0180000114.01.T01:exon:7158;Parent=MsG0180000114.01.T01
Chr1 exon 1642549 1642698 1642549 ID=MsG0180000114.01.T01:exon:7157;Parent=MsG0180000114.01.T01
Chr1 CDS 1640633 1640806 1640633 ID=MsG0180000114.01.T01:cds;Parent=MsG0180000114.01.T01
Chr1 CDS 1642114 1642236 1642114 ID=MsG0180000114.01.T01:cds;Parent=MsG0180000114.01.T01
Chr1 CDS 1642549 1642698 1642549 ID=MsG0180000114.01.T01:cds;Parent=MsG0180000114.01.T01
Gene Sequence

>MsG0180000114.01.T01

ATGAGGCATGGTGACATATTGTGCACATATATGCAATTTATATTCTCGTGTAAACTAAGCAAACAAGATTCGAAAGAAGAGAAAAAAATGGCAGCTGAAGGACAGGTGATCGGTGTTCATACCGTTGAACAGTGGAAGGAGGAGATCCAGAAGGGAAATGACTCCAAAAAACTGATTGTGGTGGATTTTACTGCTTCATGGTGTGGTCCATGCCGTTTTATTGCTCCAATTCTAGCTGAGATTGCTAAGAAGACACCTGAAGTCATCTTCCTCAAGGTGGATATTGATGAAGTAAAGACTGTTGCTGAGGAATGGTCTGTTGAGGCAATGCCAACCTTCTTGTTCTTGAAAGAAGGTAAGGAAGTGGATAAGGTAGTTGGTGCTAGGAAAGAAGAGCTGGAAAATGCAATCACCAAGCATAAGGAGGCAACTGTTGCTACTGCTTGA

Protein sequence

>MsG0180000114.01.T01

MRHGDILCTYMQFIFSCKLSKQDSKEEKKMAAEGQVIGVHTVEQWKEEIQKGNDSKKLIVVDFTASWCGPCRFIAPILAEIAKKTPEVIFLKVDIDEVKTVAEEWSVEAMPTFLFLKEGKEVDKVVGARKEELENAITKHKEATVATA*