Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280008543.01.T05 | XP_013450530.1 | 98.056 | 360 | 7 | 0 | 1 | 360 | 160 | 519 | 0 | 734 |
| MsG0280008543.01.T05 | XP_013450530.1 | 40.698 | 258 | 137 | 4 | 101 | 352 | 3 | 250 | 6.94E-48 | 180 |
| MsG0280008543.01.T04 | XP_013450530.1 | 97.805 | 410 | 9 | 0 | 1 | 410 | 110 | 519 | 0 | 842 |
| MsG0280008543.01.T04 | XP_013450530.1 | 40.698 | 258 | 137 | 4 | 151 | 402 | 3 | 250 | 3.46E-47 | 179 |
| MsG0280008543.01.T03 | XP_013450530.1 | 97.474 | 475 | 12 | 0 | 1 | 475 | 45 | 519 | 0 | 968 |
| MsG0280008543.01.T03 | XP_013450530.1 | 40.698 | 258 | 137 | 4 | 216 | 467 | 3 | 250 | 1.51E-46 | 179 |
| MsG0280008543.01.T01 | XP_013450530.1 | 75 | 360 | 23 | 4 | 1 | 293 | 160 | 519 | 6.57E-178 | 511 |
| MsG0280008543.01.T01 | XP_013450530.1 | 43.304 | 224 | 117 | 4 | 68 | 285 | 31 | 250 | 3.61E-44 | 168 |
| MsG0280008543.01.T07 | XP_013450530.1 | 96.711 | 152 | 5 | 0 | 1 | 152 | 368 | 519 | 7.96E-102 | 311 |
| MsG0280008543.01.T07 | XP_013450530.1 | 34.899 | 149 | 91 | 2 | 2 | 144 | 102 | 250 | 1.43E-20 | 98.6 |
| MsG0280008543.01.T06 | XP_013450530.1 | 97.951 | 244 | 5 | 0 | 1 | 244 | 276 | 519 | 1.85E-174 | 500 |
| MsG0280008543.01.T06 | XP_013450530.1 | 43.779 | 217 | 115 | 3 | 26 | 236 | 35 | 250 | 8.79E-45 | 167 |
| MsG0280008543.01.T02 | XP_013450530.1 | 97.11 | 519 | 15 | 0 | 1 | 519 | 1 | 519 | 0 | 1053 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280008543.01.T01 | F4ISV6 | 61.778 | 225 | 78 | 4 | 65 | 283 | 312 | 534 | 4.75E-91 | 283 |
| MsG0280008543.01.T02 | F4IRQ5 | 57.553 | 523 | 202 | 6 | 1 | 509 | 48 | 564 | 0 | 625 |
| MsG0280008543.01.T03 | F4IRQ5 | 57.66 | 470 | 188 | 4 | 1 | 465 | 101 | 564 | 0 | 575 |
| MsG0280008543.01.T04 | F4ISV6 | 54.436 | 417 | 170 | 5 | 2 | 400 | 120 | 534 | 1.82E-164 | 475 |
| MsG0280008543.01.T05 | F4ISV6 | 54.945 | 364 | 144 | 5 | 5 | 350 | 173 | 534 | 3.61E-141 | 414 |
| MsG0280008543.01.T06 | F4ISV6 | 63.75 | 240 | 79 | 4 | 1 | 234 | 297 | 534 | 7.71E-105 | 316 |
| MsG0280008543.01.T07 | F4ISV6 | 54.73 | 148 | 60 | 3 | 1 | 142 | 388 | 534 | 1.80E-47 | 164 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280008543.01.T01 | A0A072U5Y9 | 75.000 | 360 | 23 | 4 | 1 | 293 | 160 | 519 | 3.14e-178 | 511 |
| MsG0280008543.01.T02 | A0A072U5Y9 | 97.110 | 519 | 15 | 0 | 1 | 519 | 1 | 519 | 0.0 | 1053 |
| MsG0280008543.01.T03 | A0A072U5Y9 | 97.474 | 475 | 12 | 0 | 1 | 475 | 45 | 519 | 0.0 | 968 |
| MsG0280008543.01.T04 | A0A072U5Y9 | 97.805 | 410 | 9 | 0 | 1 | 410 | 110 | 519 | 0.0 | 842 |
| MsG0280008543.01.T05 | A0A072U5Y9 | 98.056 | 360 | 7 | 0 | 1 | 360 | 160 | 519 | 0.0 | 734 |
| MsG0280008543.01.T06 | A0A072U5Y9 | 97.951 | 244 | 5 | 0 | 1 | 244 | 276 | 519 | 8.86e-175 | 500 |
| MsG0280008543.01.T07 | A0A072U5Y9 | 96.711 | 152 | 5 | 0 | 1 | 152 | 368 | 519 | 3.80e-102 | 311 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048461.01 | MsG0280008543.01 | 0.808907 | 2.458548e-50 | 1.423088e-47 |
| MsG0180000195.01 | MsG0280008543.01 | 0.806238 | 9.065762e-50 | 4.895791e-47 |
| MsG0280008543.01 | MsG0280009748.01 | 0.806520 | 7.905912e-50 | 4.300076e-47 |
| MsG0280008543.01 | MsG0280011124.01 | 0.808556 | 2.922815e-50 | 1.676335e-47 |
| MsG0280008543.01 | MsG0380013834.01 | 0.820752 | 5.810227e-53 | 4.637504e-50 |
| MsG0280008543.01 | MsG0380016765.01 | 0.819556 | 1.091421e-52 | 8.426673e-50 |
| MsG0280008543.01 | MsG0480018163.01 | 0.806420 | 8.298994e-50 | 4.502311e-47 |
| MsG0280008543.01 | MsG0780036719.01 | 0.804635 | 1.965489e-49 | 1.018538e-46 |
| MsG0280008543.01 | MsG0880044237.01 | 0.845967 | 2.918765e-59 | 4.948234e-56 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280008543.01.T05 | MTR_7g115250 | 98.056 | 360 | 7 | 0 | 1 | 360 | 160 | 519 | 0.0 | 734 |
| MsG0280008543.01.T05 | MTR_7g115250 | 40.698 | 258 | 137 | 4 | 101 | 352 | 3 | 250 | 8.41e-52 | 180 |
| MsG0280008543.01.T04 | MTR_7g115250 | 97.805 | 410 | 9 | 0 | 1 | 410 | 110 | 519 | 0.0 | 842 |
| MsG0280008543.01.T04 | MTR_7g115250 | 40.698 | 258 | 137 | 4 | 151 | 402 | 3 | 250 | 4.19e-51 | 179 |
| MsG0280008543.01.T03 | MTR_7g115250 | 97.474 | 475 | 12 | 0 | 1 | 475 | 45 | 519 | 0.0 | 968 |
| MsG0280008543.01.T03 | MTR_7g115250 | 40.698 | 258 | 137 | 4 | 216 | 467 | 3 | 250 | 1.83e-50 | 179 |
| MsG0280008543.01.T01 | MTR_7g115250 | 75.000 | 360 | 23 | 4 | 1 | 293 | 160 | 519 | 0.0 | 511 |
| MsG0280008543.01.T01 | MTR_7g115250 | 43.304 | 224 | 117 | 4 | 68 | 285 | 31 | 250 | 4.37e-48 | 168 |
| MsG0280008543.01.T07 | MTR_7g115250 | 96.711 | 152 | 5 | 0 | 1 | 152 | 368 | 519 | 9.65e-106 | 311 |
| MsG0280008543.01.T07 | MTR_7g115250 | 34.899 | 149 | 91 | 2 | 2 | 144 | 102 | 250 | 1.73e-24 | 98.6 |
| MsG0280008543.01.T06 | MTR_7g115250 | 97.951 | 244 | 5 | 0 | 1 | 244 | 276 | 519 | 2.25e-178 | 500 |
| MsG0280008543.01.T06 | MTR_7g115250 | 43.779 | 217 | 115 | 3 | 26 | 236 | 35 | 250 | 1.07e-48 | 167 |
| MsG0280008543.01.T02 | MTR_7g115250 | 97.110 | 519 | 15 | 0 | 1 | 519 | 1 | 519 | 0.0 | 1053 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280008543.01.T05 | AT2G32320 | 56.818 | 352 | 144 | 4 | 5 | 350 | 173 | 522 | 3.34e-145 | 421 |
| MsG0280008543.01.T05 | AT2G32320 | 46.241 | 266 | 136 | 3 | 99 | 358 | 1 | 265 | 5.07e-81 | 256 |
| MsG0280008543.01.T05 | AT2G32320 | 55.710 | 359 | 144 | 5 | 5 | 350 | 173 | 529 | 4.34e-143 | 416 |
| MsG0280008543.01.T05 | AT2G32320 | 45.055 | 273 | 136 | 4 | 99 | 358 | 1 | 272 | 2.31e-78 | 250 |
| MsG0280008543.01.T05 | AT2G31580 | 56.410 | 351 | 142 | 4 | 5 | 350 | 173 | 517 | 2.08e-142 | 414 |
| MsG0280008543.01.T05 | AT2G31580 | 50.000 | 266 | 126 | 3 | 99 | 358 | 1 | 265 | 1.27e-86 | 271 |
| MsG0280008543.01.T05 | AT2G31580 | 56.410 | 351 | 142 | 4 | 5 | 350 | 173 | 517 | 2.08e-142 | 414 |
| MsG0280008543.01.T05 | AT2G31580 | 50.000 | 266 | 126 | 3 | 99 | 358 | 1 | 265 | 1.27e-86 | 271 |
| MsG0280008543.01.T05 | AT2G32320 | 54.945 | 364 | 144 | 5 | 5 | 350 | 173 | 534 | 3.68e-142 | 414 |
| MsG0280008543.01.T05 | AT2G32320 | 44.245 | 278 | 136 | 4 | 99 | 358 | 1 | 277 | 1.38e-77 | 248 |
| MsG0280008543.01.T05 | AT2G31580 | 56.410 | 351 | 142 | 4 | 5 | 350 | 220 | 564 | 7.19e-142 | 414 |
| MsG0280008543.01.T05 | AT2G31580 | 50.562 | 267 | 125 | 3 | 98 | 358 | 47 | 312 | 2.17e-86 | 272 |
| MsG0280008543.01.T05 | AT2G31580 | 59.756 | 246 | 98 | 1 | 5 | 250 | 173 | 417 | 2.57e-108 | 323 |
| MsG0280008543.01.T05 | AT2G31580 | 50.000 | 266 | 126 | 3 | 99 | 358 | 1 | 265 | 7.96e-88 | 271 |
| MsG0280008543.01.T05 | AT2G31580 | 59.756 | 246 | 98 | 1 | 5 | 250 | 220 | 464 | 8.99e-108 | 323 |
| MsG0280008543.01.T05 | AT2G31580 | 49.813 | 267 | 127 | 3 | 98 | 358 | 47 | 312 | 1.30e-87 | 272 |
| MsG0280008543.01.T04 | AT2G32320 | 56.049 | 405 | 170 | 4 | 2 | 400 | 120 | 522 | 1.11e-168 | 483 |
| MsG0280008543.01.T04 | AT2G32320 | 46.241 | 266 | 136 | 3 | 149 | 408 | 1 | 265 | 3.68e-80 | 256 |
| MsG0280008543.01.T04 | AT2G32320 | 55.097 | 412 | 170 | 5 | 2 | 400 | 120 | 529 | 2.14e-166 | 478 |
| MsG0280008543.01.T04 | AT2G32320 | 45.055 | 273 | 136 | 4 | 149 | 408 | 1 | 272 | 2.00e-77 | 249 |
| MsG0280008543.01.T04 | AT2G32320 | 54.436 | 417 | 170 | 5 | 2 | 400 | 120 | 534 | 1.85e-165 | 475 |
| MsG0280008543.01.T04 | AT2G32320 | 44.245 | 278 | 136 | 4 | 149 | 408 | 1 | 277 | 1.26e-76 | 247 |
| MsG0280008543.01.T04 | AT2G31580 | 56.391 | 399 | 163 | 4 | 7 | 400 | 125 | 517 | 2.05e-165 | 474 |
| MsG0280008543.01.T04 | AT2G31580 | 50.000 | 266 | 126 | 3 | 149 | 408 | 1 | 265 | 1.04e-85 | 270 |
| MsG0280008543.01.T04 | AT2G31580 | 34.783 | 138 | 84 | 1 | 2 | 139 | 386 | 517 | 1.94e-21 | 96.7 |
| MsG0280008543.01.T04 | AT2G31580 | 56.391 | 399 | 163 | 4 | 7 | 400 | 125 | 517 | 2.05e-165 | 474 |
| MsG0280008543.01.T04 | AT2G31580 | 50.000 | 266 | 126 | 3 | 149 | 408 | 1 | 265 | 1.04e-85 | 270 |
| MsG0280008543.01.T04 | AT2G31580 | 34.783 | 138 | 84 | 1 | 2 | 139 | 386 | 517 | 1.94e-21 | 96.7 |
| MsG0280008543.01.T04 | AT2G31580 | 56.391 | 399 | 163 | 4 | 7 | 400 | 172 | 564 | 7.42e-165 | 475 |
| MsG0280008543.01.T04 | AT2G31580 | 50.562 | 267 | 125 | 3 | 148 | 408 | 47 | 312 | 1.74e-85 | 271 |
| MsG0280008543.01.T04 | AT2G31580 | 34.783 | 138 | 84 | 1 | 2 | 139 | 433 | 564 | 1.95e-21 | 97.1 |
| MsG0280008543.01.T04 | AT2G31580 | 59.184 | 294 | 119 | 1 | 7 | 300 | 125 | 417 | 1.44e-131 | 385 |
| MsG0280008543.01.T04 | AT2G31580 | 50.000 | 266 | 126 | 3 | 149 | 408 | 1 | 265 | 5.39e-87 | 271 |
| MsG0280008543.01.T04 | AT2G31580 | 59.184 | 294 | 119 | 1 | 7 | 300 | 172 | 464 | 5.82e-131 | 385 |
| MsG0280008543.01.T04 | AT2G31580 | 49.813 | 267 | 127 | 3 | 148 | 408 | 47 | 312 | 1.10e-86 | 271 |
| MsG0280008543.01.T03 | AT2G32320 | 57.537 | 471 | 192 | 4 | 1 | 465 | 54 | 522 | 0.0 | 578 |
| MsG0280008543.01.T03 | AT2G32320 | 46.617 | 266 | 135 | 3 | 214 | 473 | 1 | 265 | 3.54e-79 | 256 |
| MsG0280008543.01.T03 | AT2G31580 | 57.660 | 470 | 188 | 4 | 1 | 465 | 101 | 564 | 0.0 | 575 |
| MsG0280008543.01.T03 | AT2G31580 | 50.562 | 267 | 125 | 3 | 213 | 473 | 47 | 312 | 1.31e-84 | 271 |
| MsG0280008543.01.T03 | AT2G31580 | 57.660 | 470 | 188 | 4 | 1 | 465 | 54 | 517 | 0.0 | 575 |
| MsG0280008543.01.T03 | AT2G31580 | 50.752 | 266 | 124 | 3 | 214 | 473 | 1 | 265 | 8.59e-85 | 270 |
| MsG0280008543.01.T03 | AT2G31580 | 57.660 | 470 | 188 | 4 | 1 | 465 | 54 | 517 | 0.0 | 575 |
| MsG0280008543.01.T03 | AT2G31580 | 50.752 | 266 | 124 | 3 | 214 | 473 | 1 | 265 | 8.59e-85 | 270 |
| MsG0280008543.01.T03 | AT2G32320 | 56.695 | 478 | 192 | 5 | 1 | 465 | 54 | 529 | 0.0 | 573 |
| MsG0280008543.01.T03 | AT2G32320 | 45.421 | 273 | 135 | 4 | 214 | 473 | 1 | 272 | 1.45e-76 | 249 |
| MsG0280008543.01.T03 | AT2G32320 | 56.108 | 483 | 192 | 5 | 1 | 465 | 54 | 534 | 0.0 | 572 |
| MsG0280008543.01.T03 | AT2G32320 | 44.245 | 278 | 136 | 4 | 214 | 473 | 1 | 277 | 8.18e-76 | 247 |
| MsG0280008543.01.T03 | AT2G31580 | 60.274 | 365 | 144 | 1 | 1 | 365 | 54 | 417 | 8.75e-170 | 484 |
| MsG0280008543.01.T03 | AT2G31580 | 50.752 | 266 | 124 | 3 | 214 | 473 | 1 | 265 | 4.18e-86 | 271 |
| MsG0280008543.01.T03 | AT2G31580 | 60.274 | 365 | 144 | 1 | 1 | 365 | 101 | 464 | 3.79e-169 | 484 |
| MsG0280008543.01.T03 | AT2G31580 | 50.562 | 267 | 125 | 3 | 213 | 473 | 47 | 312 | 9.45e-86 | 271 |
| MsG0280008543.01.T01 | AT2G32320 | 61.778 | 225 | 78 | 4 | 65 | 283 | 300 | 522 | 3.52e-92 | 283 |
| MsG0280008543.01.T01 | AT2G32320 | 47.414 | 232 | 115 | 3 | 66 | 291 | 35 | 265 | 1.93e-72 | 232 |
| MsG0280008543.01.T01 | AT2G32320 | 61.778 | 225 | 78 | 4 | 65 | 283 | 307 | 529 | 3.57e-92 | 283 |
| MsG0280008543.01.T01 | AT2G32320 | 46.025 | 239 | 115 | 4 | 66 | 291 | 35 | 272 | 9.23e-70 | 225 |
| MsG0280008543.01.T01 | AT2G32320 | 61.778 | 225 | 78 | 4 | 65 | 283 | 312 | 534 | 4.85e-92 | 283 |
| MsG0280008543.01.T01 | AT2G32320 | 45.082 | 244 | 115 | 4 | 66 | 291 | 35 | 277 | 4.87e-69 | 223 |
| MsG0280008543.01.T01 | AT2G31580 | 60.987 | 223 | 76 | 4 | 66 | 283 | 301 | 517 | 4.19e-90 | 277 |
| MsG0280008543.01.T01 | AT2G31580 | 50.862 | 232 | 107 | 3 | 66 | 291 | 35 | 265 | 2.15e-77 | 244 |
| MsG0280008543.01.T01 | AT2G31580 | 60.987 | 223 | 76 | 4 | 66 | 283 | 301 | 517 | 4.19e-90 | 277 |
| MsG0280008543.01.T01 | AT2G31580 | 50.862 | 232 | 107 | 3 | 66 | 291 | 35 | 265 | 2.15e-77 | 244 |
| MsG0280008543.01.T01 | AT2G31580 | 60.987 | 223 | 76 | 4 | 66 | 283 | 348 | 564 | 9.51e-90 | 278 |
| MsG0280008543.01.T01 | AT2G31580 | 50.862 | 232 | 107 | 3 | 66 | 291 | 82 | 312 | 4.74e-77 | 245 |
| MsG0280008543.01.T01 | AT2G31580 | 50.862 | 232 | 107 | 3 | 66 | 291 | 35 | 265 | 1.75e-78 | 244 |
| MsG0280008543.01.T01 | AT2G31580 | 72.034 | 118 | 32 | 1 | 66 | 183 | 301 | 417 | 4.64e-56 | 186 |
| MsG0280008543.01.T01 | AT2G31580 | 50.862 | 232 | 107 | 3 | 66 | 291 | 82 | 312 | 3.42e-78 | 245 |
| MsG0280008543.01.T01 | AT2G31580 | 72.034 | 118 | 32 | 1 | 66 | 183 | 348 | 464 | 9.93e-56 | 187 |
| MsG0280008543.01.T07 | AT2G32320 | 54.730 | 148 | 60 | 3 | 1 | 142 | 376 | 522 | 1.38e-48 | 164 |
| MsG0280008543.01.T07 | AT2G32320 | 39.355 | 155 | 88 | 2 | 2 | 150 | 111 | 265 | 6.61e-36 | 130 |
| MsG0280008543.01.T07 | AT2G32320 | 54.730 | 148 | 60 | 3 | 1 | 142 | 383 | 529 | 1.51e-48 | 164 |
| MsG0280008543.01.T07 | AT2G32320 | 37.654 | 162 | 88 | 3 | 2 | 150 | 111 | 272 | 2.57e-33 | 123 |
| MsG0280008543.01.T07 | AT2G32320 | 54.730 | 148 | 60 | 3 | 1 | 142 | 388 | 534 | 1.84e-48 | 164 |
| MsG0280008543.01.T07 | AT2G32320 | 36.527 | 167 | 88 | 3 | 2 | 150 | 111 | 277 | 1.06e-32 | 121 |
| MsG0280008543.01.T07 | AT2G31580 | 53.061 | 147 | 59 | 3 | 1 | 142 | 376 | 517 | 8.31e-47 | 159 |
| MsG0280008543.01.T07 | AT2G31580 | 42.581 | 155 | 83 | 2 | 2 | 150 | 111 | 265 | 5.65e-38 | 135 |
| MsG0280008543.01.T07 | AT2G31580 | 53.061 | 147 | 59 | 3 | 1 | 142 | 376 | 517 | 8.31e-47 | 159 |
| MsG0280008543.01.T07 | AT2G31580 | 42.581 | 155 | 83 | 2 | 2 | 150 | 111 | 265 | 5.65e-38 | 135 |
| MsG0280008543.01.T07 | AT2G31580 | 53.061 | 147 | 59 | 3 | 1 | 142 | 423 | 564 | 1.29e-46 | 159 |
| MsG0280008543.01.T07 | AT2G31580 | 42.581 | 155 | 83 | 2 | 2 | 150 | 158 | 312 | 7.38e-38 | 135 |
| MsG0280008543.01.T07 | AT2G31580 | 42.581 | 155 | 83 | 2 | 2 | 150 | 111 | 265 | 1.54e-38 | 135 |
| MsG0280008543.01.T07 | AT2G31580 | 64.286 | 42 | 15 | 0 | 1 | 42 | 376 | 417 | 1.72e-14 | 69.7 |
| MsG0280008543.01.T07 | AT2G31580 | 42.581 | 155 | 83 | 2 | 2 | 150 | 158 | 312 | 2.41e-38 | 135 |
| MsG0280008543.01.T07 | AT2G31580 | 64.286 | 42 | 15 | 0 | 1 | 42 | 423 | 464 | 1.76e-14 | 69.7 |
| MsG0280008543.01.T06 | AT2G32320 | 63.750 | 240 | 79 | 4 | 1 | 234 | 292 | 529 | 4.01e-106 | 317 |
| MsG0280008543.01.T06 | AT2G32320 | 45.490 | 255 | 125 | 4 | 1 | 242 | 19 | 272 | 1.42e-74 | 236 |
| MsG0280008543.01.T06 | AT2G32320 | 63.750 | 240 | 79 | 4 | 1 | 234 | 285 | 522 | 4.97e-106 | 316 |
| MsG0280008543.01.T06 | AT2G32320 | 46.774 | 248 | 125 | 3 | 1 | 242 | 19 | 265 | 3.20e-77 | 242 |
| MsG0280008543.01.T06 | AT2G32320 | 63.750 | 240 | 79 | 4 | 1 | 234 | 297 | 534 | 7.86e-106 | 316 |
| MsG0280008543.01.T06 | AT2G32320 | 44.615 | 260 | 125 | 4 | 1 | 242 | 19 | 277 | 9.42e-74 | 234 |
| MsG0280008543.01.T06 | AT2G31580 | 62.762 | 239 | 78 | 4 | 1 | 234 | 285 | 517 | 6.70e-104 | 311 |
| MsG0280008543.01.T06 | AT2G31580 | 51.613 | 248 | 113 | 3 | 1 | 242 | 19 | 265 | 7.11e-83 | 257 |
| MsG0280008543.01.T06 | AT2G31580 | 62.762 | 239 | 78 | 4 | 1 | 234 | 285 | 517 | 6.70e-104 | 311 |
| MsG0280008543.01.T06 | AT2G31580 | 51.613 | 248 | 113 | 3 | 1 | 242 | 19 | 265 | 7.11e-83 | 257 |
| MsG0280008543.01.T06 | AT2G31580 | 62.762 | 239 | 78 | 4 | 1 | 234 | 332 | 564 | 2.21e-103 | 311 |
| MsG0280008543.01.T06 | AT2G31580 | 51.613 | 248 | 113 | 3 | 1 | 242 | 66 | 312 | 1.98e-82 | 257 |
| MsG0280008543.01.T06 | AT2G31580 | 51.613 | 248 | 113 | 3 | 1 | 242 | 19 | 265 | 4.60e-84 | 257 |
| MsG0280008543.01.T06 | AT2G31580 | 73.881 | 134 | 34 | 1 | 1 | 134 | 285 | 417 | 6.89e-70 | 220 |
| MsG0280008543.01.T06 | AT2G31580 | 51.613 | 248 | 113 | 3 | 1 | 242 | 66 | 312 | 1.08e-83 | 257 |
| MsG0280008543.01.T06 | AT2G31580 | 73.881 | 134 | 34 | 1 | 1 | 134 | 332 | 464 | 1.59e-69 | 221 |
| MsG0280008543.01.T02 | AT2G32320 | 57.252 | 524 | 207 | 5 | 1 | 509 | 1 | 522 | 0.0 | 630 |
| MsG0280008543.01.T02 | AT2G32320 | 46.617 | 266 | 135 | 3 | 258 | 517 | 1 | 265 | 1.29e-78 | 256 |
| MsG0280008543.01.T02 | AT2G32320 | 56.497 | 531 | 207 | 6 | 1 | 509 | 1 | 529 | 0.0 | 625 |
| MsG0280008543.01.T02 | AT2G32320 | 45.421 | 273 | 135 | 4 | 258 | 517 | 1 | 272 | 5.23e-76 | 249 |
| MsG0280008543.01.T02 | AT2G31580 | 57.553 | 523 | 202 | 6 | 1 | 509 | 48 | 564 | 0.0 | 625 |
| MsG0280008543.01.T02 | AT2G31580 | 50.562 | 267 | 125 | 3 | 257 | 517 | 47 | 312 | 4.77e-84 | 271 |
| MsG0280008543.01.T02 | AT2G31580 | 57.553 | 523 | 202 | 6 | 1 | 509 | 1 | 517 | 0.0 | 624 |
| MsG0280008543.01.T02 | AT2G31580 | 50.752 | 266 | 124 | 3 | 258 | 517 | 1 | 265 | 2.47e-84 | 271 |
| MsG0280008543.01.T02 | AT2G31580 | 57.553 | 523 | 202 | 6 | 1 | 509 | 1 | 517 | 0.0 | 624 |
| MsG0280008543.01.T02 | AT2G31580 | 50.752 | 266 | 124 | 3 | 258 | 517 | 1 | 265 | 2.47e-84 | 271 |
| MsG0280008543.01.T02 | AT2G32320 | 55.970 | 536 | 207 | 6 | 1 | 509 | 1 | 534 | 0.0 | 623 |
| MsG0280008543.01.T02 | AT2G32320 | 44.245 | 278 | 136 | 4 | 258 | 517 | 1 | 277 | 2.59e-75 | 248 |
| MsG0280008543.01.T02 | AT2G31580 | 59.809 | 418 | 158 | 3 | 1 | 409 | 48 | 464 | 0.0 | 534 |
| MsG0280008543.01.T02 | AT2G31580 | 50.562 | 267 | 125 | 3 | 257 | 517 | 47 | 312 | 2.66e-85 | 271 |
| MsG0280008543.01.T02 | AT2G31580 | 59.809 | 418 | 158 | 3 | 1 | 409 | 1 | 417 | 0.0 | 534 |
| MsG0280008543.01.T02 | AT2G31580 | 50.752 | 266 | 124 | 3 | 258 | 517 | 1 | 265 | 1.24e-85 | 271 |
Find 81 sgRNAs with CRISPR-Local
Find 105 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAATAGCAAGCACGAGATTT+TGG | 0.193208 | 2:-33739565 | MsG0280008543.01.T05:CDS |
| ATCAATATAACACTTGTTTC+TGG | 0.196106 | 2:-33739028 | MsG0280008543.01.T05:CDS |
| CATCTGTCTTTGTTAGAAAA+TGG | 0.204561 | 2:-33739979 | MsG0280008543.01.T02:CDS |
| GTAGCACATATTGACATAAT+TGG | 0.217082 | 2:-33738795 | MsG0280008543.01.T05:CDS |
| GATGGAAACAAGGATGAAAT+TGG | 0.225470 | 2:+33740204 | None:intergenic |
| GGAAGCTCAACGTAGTTTAA+AGG | 0.298288 | 2:-33738976 | MsG0280008543.01.T05:CDS |
| CATTCTCCTCCTTCTTTCCA+TGG | 0.301304 | 2:-33739929 | MsG0280008543.01.T02:CDS |
| ATCAATATGATCAATGCTTT+TGG | 0.315113 | 2:-33739829 | MsG0280008543.01.T02:CDS |
| TTCTGGAAGCTTGTTGCATC+TGG | 0.315797 | 2:-33739011 | MsG0280008543.01.T05:CDS |
| ACATAATTGGATCAGCCTTT+TGG | 0.332320 | 2:-33738782 | MsG0280008543.01.T05:CDS |
| GACAAGGATCCTCAGTATAT+CGG | 0.355766 | 2:-33738887 | MsG0280008543.01.T05:CDS |
| GTGCTCCGGTTGTAAGAAAA+AGG | 0.371975 | 2:-33739616 | MsG0280008543.01.T05:CDS |
| TGGCTGTCTTAGAAGAATTT+AGG | 0.384849 | 2:-33739319 | MsG0280008543.01.T05:CDS |
| TTCAGAGCTCTGTCGTCGTT+TGG | 0.385495 | 2:+33739362 | None:intergenic |
| TGGGTTGTCGTTCGGATAGA+TGG | 0.400901 | 2:-33739428 | MsG0280008543.01.T05:CDS |
| CGTCTACATGGGTTGTCGTT+CGG | 0.419353 | 2:-33739436 | MsG0280008543.01.T05:CDS |
| CAGGATATAGTATTTGCTTA+CGG | 0.421233 | 2:-33739296 | MsG0280008543.01.T05:CDS |
| AGGATATAGTATTTGCTTAC+GGG | 0.422090 | 2:-33739295 | MsG0280008543.01.T05:CDS |
| CCCTTCAAGCATATCTTTCG+TGG | 0.441511 | 2:-33739877 | MsG0280008543.01.T02:CDS |
| ATGGAAACAAGGATGAAATT+GGG | 0.453327 | 2:+33740205 | None:intergenic |
| TGTTATATTGATTGTTTATG+TGG | 0.458697 | 2:+33739039 | None:intergenic |
| GAATAATTTAACTCAGTTTG+AGG | 0.467561 | 2:+33739143 | None:intergenic |
| ATTCTCCTCCTTCTTTCCAT+GGG | 0.473862 | 2:-33739928 | MsG0280008543.01.T02:CDS |
| GCAAGTTGATGCCGTCTACA+TGG | 0.480368 | 2:-33739448 | MsG0280008543.01.T05:CDS |
| GAAGACAATGGTAGGGGATG+TGG | 0.484093 | 2:-33739657 | MsG0280008543.01.T05:CDS |
| AGACAATGTTCTCATCCATC+AGG | 0.486541 | 2:-33738856 | MsG0280008543.01.T05:CDS |
| GAAGCTCAACGTAGTTTAAA+GGG | 0.486895 | 2:-33738975 | MsG0280008543.01.T05:CDS |
| TCCACGAAAGATATGCTTGA+AGG | 0.490776 | 2:+33739876 | None:intergenic |
| TAATGTTAATTACAATACAT+TGG | 0.491350 | 2:-33739711 | MsG0280008543.01.T05:CDS |
| AGAGAGTCTTCTGAAAGTTA+CGG | 0.495476 | 2:-33738828 | MsG0280008543.01.T05:CDS |
| ACAAGGATCCTCAGTATATC+GGG | 0.501667 | 2:-33738886 | MsG0280008543.01.T05:CDS |
| AGGACGTCTTTCATAGAACT+TGG | 0.503784 | 2:+33740036 | None:intergenic |
| TCTCAGAAAATCTATGAAAG+TGG | 0.505574 | 2:+33739402 | None:intergenic |
| GCCCGGGTGTTCCAACCAAA+AGG | 0.507374 | 2:+33738767 | None:intergenic |
| GCATCAATTCTTCCCGCAGA+TGG | 0.511538 | 2:-33739957 | MsG0280008543.01.T02:CDS |
| CTTCAACTTACGTGATGAGA+TGG | 0.518619 | 2:-33739178 | MsG0280008543.01.T05:CDS |
| TTCAAAGTAGTTACATGGTG+AGG | 0.523621 | 2:+33740160 | None:intergenic |
| GATATACTGAGGATCCTTGT+CGG | 0.525089 | 2:+33738889 | None:intergenic |
| ATGACTTTCCCATGGAAAGA+AGG | 0.531897 | 2:+33739920 | None:intergenic |
| TTGTACGAGACTATCTTTCG+TGG | 0.535629 | 2:-33739076 | MsG0280008543.01.T05:CDS |
| CACGTAAGTTGAAGTGAAGA+AGG | 0.536964 | 2:+33739187 | None:intergenic |
| AAGACTCTCTATTCTCCTGA+TGG | 0.545478 | 2:+33738841 | None:intergenic |
| CATGATCCTTGTCGTAACAT+TGG | 0.547787 | 2:+33739686 | None:intergenic |
| GCTGATATAGTTCTCGCATA+CGG | 0.547805 | 2:-33740097 | MsG0280008543.01.T02:CDS |
| TCAAATTCAAAGTAGTTACA+TGG | 0.550159 | 2:+33740155 | None:intergenic |
| GATCCTTGTCGGAACATCAC+AGG | 0.557479 | 2:+33738900 | None:intergenic |
| GGAGATTAACAATGTGAAGC+CGG | 0.561526 | 2:-33739498 | MsG0280008543.01.T05:CDS |
| TGTCTTAGAAGAATTTAGGC+AGG | 0.561582 | 2:-33739315 | MsG0280008543.01.T05:CDS |
| CAACTTGCTATCAAAATCAA+AGG | 0.562419 | 2:+33739463 | None:intergenic |
| TTGAAGCAGTGATGGAAACA+AGG | 0.565596 | 2:+33740194 | None:intergenic |
| ACGTCTTTCATAGAACTTGG+TGG | 0.569950 | 2:+33740039 | None:intergenic |
| TCTCGTACAATCTCAGCAGA+TGG | 0.571700 | 2:+33739089 | None:intergenic |
| CAAGTTGATGCCGTCTACAT+GGG | 0.573568 | 2:-33739447 | MsG0280008543.01.T05:CDS |
| TCAAAGGACCTCACATACTC+CGG | 0.578559 | 2:+33739479 | None:intergenic |
| GAGAATGCAGTTCCATCTGC+GGG | 0.581278 | 2:+33739945 | None:intergenic |
| TCAACTGCAAAAGAAAATTG+AGG | 0.584666 | 2:-33738949 | MsG0280008543.01.T05:CDS |
| CCACGAAAGATATGCTTGAA+GGG | 0.586300 | 2:+33739877 | None:intergenic |
| AATCCACTGATCTTTATCAA+AGG | 0.587140 | 2:-33739241 | MsG0280008543.01.T05:CDS |
| ACTGCTCGTGCATCAAAAGA+AGG | 0.597656 | 2:+33739119 | None:intergenic |
| GTACACTGAAGATGGTGCTC+CGG | 0.605681 | 2:-33739630 | MsG0280008543.01.T05:CDS |
| GGAGAATGCAGTTCCATCTG+CGG | 0.614558 | 2:+33739944 | None:intergenic |
| ATACTCTTCAAGCACCGCAA+CGG | 0.615343 | 2:+33740120 | None:intergenic |
| GGTGGTCTTCTTGAAAACAA+AGG | 0.616388 | 2:+33740057 | None:intergenic |
| GATGAATTCTTGCGCCGTTG+CGG | 0.621880 | 2:-33740134 | MsG0280008543.01.T02:CDS |
| CACAAGGTATGACTTTCCCA+TGG | 0.623313 | 2:+33739912 | None:intergenic |
| GGATATAGTATTTGCTTACG+GGG | 0.628115 | 2:-33739294 | MsG0280008543.01.T05:CDS |
| ATGTGAAGCCGGAGTATGTG+AGG | 0.637922 | 2:-33739487 | MsG0280008543.01.T05:CDS |
| AATGAATGAGAAGGAAGCAA+AGG | 0.639879 | 2:-33739789 | MsG0280008543.01.T05:CDS |
| CGAACGACAACCCATGTAGA+CGG | 0.642243 | 2:+33739437 | None:intergenic |
| GTGGTGAAGTACACTGAAGA+TGG | 0.648204 | 2:-33739638 | MsG0280008543.01.T05:CDS |
| TTCAAGCATATCTTTCGTGG+AGG | 0.651523 | 2:-33739874 | MsG0280008543.01.T02:CDS |
| CTGCCTGTGATGTTCCGACA+AGG | 0.653480 | 2:-33738903 | MsG0280008543.01.T05:CDS |
| TACGAGACTATCTTTCGTGG+AGG | 0.660506 | 2:-33739073 | MsG0280008543.01.T05:CDS |
| ACTTTCCCATGGAAAGAAGG+AGG | 0.662173 | 2:+33739923 | None:intergenic |
| CTTGATGAATTCATGTGCGG+TGG | 0.664255 | 2:-33739339 | MsG0280008543.01.T05:CDS |
| TGAACGCGGAATGAATGAGA+AGG | 0.664793 | 2:-33739798 | MsG0280008543.01.T02:CDS |
| TCTCCTTTGATAAAGATCAG+TGG | 0.665765 | 2:+33739238 | None:intergenic |
| GAACTTGATGAATTCATGTG+CGG | 0.679141 | 2:-33739342 | MsG0280008543.01.T05:CDS |
| TATTCTATCCCGATATACTG+AGG | 0.682722 | 2:+33738878 | None:intergenic |
| TTGGATCCAATGTTACGACA+AGG | 0.712596 | 2:-33739692 | MsG0280008543.01.T05:CDS |
| AGGGCATCTATAGCTGCACA+AGG | 0.721472 | 2:+33739896 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATGTTAATTACAATACAT+TGG | - | Chr2:33739282-33739301 | MsG0280008543.01.T05:CDS | 15.0% |
| !!! | TGTTATATTGATTGTTTATG+TGG | + | Chr2:33739957-33739976 | None:intergenic | 20.0% |
| ! | ATCAATATAACACTTGTTTC+TGG | - | Chr2:33739965-33739984 | MsG0280008543.01.T02:CDS | 25.0% |
| ! | GAATAATTTAACTCAGTTTG+AGG | + | Chr2:33739853-33739872 | None:intergenic | 25.0% |
| ! | TCAAATTCAAAGTAGTTACA+TGG | + | Chr2:33738841-33738860 | None:intergenic | 25.0% |
| ! | TGAGAAAAAAGAAGAAACAA+TGG | + | Chr2:33738996-33739015 | None:intergenic | 25.0% |
| !! | ACAATGGATAATATTTTGCT+AGG | + | Chr2:33738980-33738999 | None:intergenic | 25.0% |
| !! | ATCAATATGATCAATGCTTT+TGG | - | Chr2:33739164-33739183 | MsG0280008543.01.T05:CDS | 25.0% |
| !! | TGAACAAACTATTCTTTTGA+AGG | - | Chr2:33739453-33739472 | MsG0280008543.01.T05:CDS | 25.0% |
| AATCCACTGATCTTTATCAA+AGG | - | Chr2:33739752-33739771 | MsG0280008543.01.T05:CDS | 30.0% | |
| AGGATATAGTATTTGCTTAC+GGG | - | Chr2:33739698-33739717 | MsG0280008543.01.T05:CDS | 30.0% | |
| ATGGAAACAAGGATGAAATT+GGG | + | Chr2:33738791-33738810 | None:intergenic | 30.0% | |
| CAGGATATAGTATTTGCTTA+CGG | - | Chr2:33739697-33739716 | MsG0280008543.01.T05:CDS | 30.0% | |
| CATCTGTCTTTGTTAGAAAA+TGG | - | Chr2:33739014-33739033 | MsG0280008543.01.T05:CDS | 30.0% | |
| GTAGCACATATTGACATAAT+TGG | - | Chr2:33740198-33740217 | MsG0280008543.01.T02:CDS | 30.0% | |
| TCAACTGCAAAAGAAAATTG+AGG | - | Chr2:33740044-33740063 | MsG0280008543.01.T02:CDS | 30.0% | |
| TCTCAGAAAATCTATGAAAG+TGG | + | Chr2:33739594-33739613 | None:intergenic | 30.0% | |
| ! | ACACATGTAGTTTTTCATCA+AGG | + | Chr2:33740254-33740273 | None:intergenic | 30.0% |
| ! | TTTCTCCTTTTTCTTACAAC+CGG | + | Chr2:33739385-33739404 | None:intergenic | 30.0% |
| !! | CAACTTGCTATCAAAATCAA+AGG | + | Chr2:33739533-33739552 | None:intergenic | 30.0% |
| !!! | ATCATGTGTTTTGAAGACAA+TGG | - | Chr2:33739324-33739343 | MsG0280008543.01.T05:CDS | 30.0% |
| AATGAATGAGAAGGAAGCAA+AGG | - | Chr2:33739204-33739223 | MsG0280008543.01.T05:CDS | 35.0% | |
| GAACTTGATGAATTCATGTG+CGG | - | Chr2:33739651-33739670 | MsG0280008543.01.T05:CDS | 35.0% | |
| GAAGCTCAACGTAGTTTAAA+GGG | - | Chr2:33740018-33740037 | MsG0280008543.01.T02:CDS | 35.0% | |
| GATGGAAACAAGGATGAAAT+TGG | + | Chr2:33738792-33738811 | None:intergenic | 35.0% | |
| GGATATAGTATTTGCTTACG+GGG | - | Chr2:33739699-33739718 | MsG0280008543.01.T05:CDS | 35.0% | |
| TATTCTATCCCGATATACTG+AGG | + | Chr2:33740118-33740137 | None:intergenic | 35.0% | |
| TCTCCTTTGATAAAGATCAG+TGG | + | Chr2:33739758-33739777 | None:intergenic | 35.0% | |
| TGGCTGTCTTAGAAGAATTT+AGG | - | Chr2:33739674-33739693 | MsG0280008543.01.T05:CDS | 35.0% | |
| TGTCTTAGAAGAATTTAGGC+AGG | - | Chr2:33739678-33739697 | MsG0280008543.01.T05:CDS | 35.0% | |
| TTCAAAGTAGTTACATGGTG+AGG | + | Chr2:33738836-33738855 | None:intergenic | 35.0% | |
| TTGCATCTGGAAAAAGCAAA+CGG | - | Chr2:33739995-33740014 | MsG0280008543.01.T02:CDS | 35.0% | |
| ! | AAATAGCAAGCACGAGATTT+TGG | - | Chr2:33739428-33739447 | MsG0280008543.01.T05:CDS | 35.0% |
| ! | ACATAATTGGATCAGCCTTT+TGG | - | Chr2:33740211-33740230 | MsG0280008543.01.T02:CDS | 35.0% |
| ! | AGAGAGTCTTCTGAAAGTTA+CGG | - | Chr2:33740165-33740184 | MsG0280008543.01.T02:CDS | 35.0% |
| ! | GAAGCAAAGGATTTTATCGA+TGG | - | Chr2:33739217-33739236 | MsG0280008543.01.T05:CDS | 35.0% |
| !! | ACTATTCTTTTGAAGGAGCT+TGG | - | Chr2:33739460-33739479 | MsG0280008543.01.T05:CDS | 35.0% |
| !!! | GTGTTTTGAAGACAATGGTA+GGG | - | Chr2:33739329-33739348 | MsG0280008543.01.T05:CDS | 35.0% |
| !!! | TGTGTTTTGAAGACAATGGT+AGG | - | Chr2:33739328-33739347 | MsG0280008543.01.T05:CDS | 35.0% |
| !!! | TGTTTTGAAGACAATGGTAG+GGG | - | Chr2:33739330-33739349 | MsG0280008543.01.T05:CDS | 35.0% |
| AAGACTCTCTATTCTCCTGA+TGG | + | Chr2:33740155-33740174 | None:intergenic | 40.0% | |
| ACAAGGATCCTCAGTATATC+GGG | - | Chr2:33740107-33740126 | MsG0280008543.01.T02:CDS | 40.0% | |
| ACGTCTTTCATAGAACTTGG+TGG | + | Chr2:33738957-33738976 | None:intergenic | 40.0% | |
| AGACAATGTTCTCATCCATC+AGG | - | Chr2:33740137-33740156 | MsG0280008543.01.T02:CDS | 40.0% | |
| AGGACGTCTTTCATAGAACT+TGG | + | Chr2:33738960-33738979 | None:intergenic | 40.0% | |
| ATGACTTTCCCATGGAAAGA+AGG | + | Chr2:33739076-33739095 | None:intergenic | 40.0% | |
| ATTCTCCTCCTTCTTTCCAT+GGG | - | Chr2:33739065-33739084 | MsG0280008543.01.T05:CDS | 40.0% | |
| CATGATCCTTGTCGTAACAT+TGG | + | Chr2:33739310-33739329 | None:intergenic | 40.0% | |
| CCACGAAAGATATGCTTGAA+GGG | + | Chr2:33739119-33739138 | None:intergenic | 40.0% | |
| CTTCAACTTACGTGATGAGA+TGG | - | Chr2:33739815-33739834 | MsG0280008543.01.T02:CDS | 40.0% | |
| GACAAGGATCCTCAGTATAT+CGG | - | Chr2:33740106-33740125 | MsG0280008543.01.T02:CDS | 40.0% | |
| GATATACTGAGGATCCTTGT+CGG | + | Chr2:33740107-33740126 | None:intergenic | 40.0% | |
| GCTGATATAGTTCTCGCATA+CGG | - | Chr2:33738896-33738915 | MsG0280008543.01.T05:CDS | 40.0% | |
| GGAAGCTCAACGTAGTTTAA+AGG | - | Chr2:33740017-33740036 | MsG0280008543.01.T02:CDS | 40.0% | |
| GGAGATTAACAATGTGAAGC+CGG | - | Chr2:33739495-33739514 | MsG0280008543.01.T05:CDS | 40.0% | |
| GGTGGTCTTCTTGAAAACAA+AGG | + | Chr2:33738939-33738958 | None:intergenic | 40.0% | |
| TCCACGAAAGATATGCTTGA+AGG | + | Chr2:33739120-33739139 | None:intergenic | 40.0% | |
| TGCATCTGGAAAAAGCAAAC+GGG | - | Chr2:33739996-33740015 | MsG0280008543.01.T02:CDS | 40.0% | |
| TTCAAGCATATCTTTCGTGG+AGG | - | Chr2:33739119-33739138 | MsG0280008543.01.T05:CDS | 40.0% | |
| TTGGATCCAATGTTACGACA+AGG | - | Chr2:33739301-33739320 | MsG0280008543.01.T05:CDS | 40.0% | |
| TTGTACGAGACTATCTTTCG+TGG | - | Chr2:33739917-33739936 | MsG0280008543.01.T02:CDS | 40.0% | |
| ! | AATTGGATCAGCCTTTTGGT+TGG | - | Chr2:33740215-33740234 | MsG0280008543.01.T02:CDS | 40.0% |
| ! | AGTTTTTCATCAAGGATGCC+CGG | + | Chr2:33740246-33740265 | None:intergenic | 40.0% |
| ! | CACGTAAGTTGAAGTGAAGA+AGG | + | Chr2:33739809-33739828 | None:intergenic | 40.0% |
| ! | TTGAAGCAGTGATGGAAACA+AGG | + | Chr2:33738802-33738821 | None:intergenic | 40.0% |
| !! | TGTCAAGTGTTTTGAACTCG+AGG | - | Chr2:33738751-33738770 | MsG0280008543.01.T05:CDS | 40.0% |
| !!! | GTGAAGTTTTGAAGCAGTGA+TGG | + | Chr2:33738810-33738829 | None:intergenic | 40.0% |
| ACTGCTCGTGCATCAAAAGA+AGG | + | Chr2:33739877-33739896 | None:intergenic | 45.0% | |
| ACTTTCCCATGGAAAGAAGG+AGG | + | Chr2:33739073-33739092 | None:intergenic | 45.0% | |
| CACAAGGTATGACTTTCCCA+TGG | + | Chr2:33739084-33739103 | None:intergenic | 45.0% | |
| CATTCTCCTCCTTCTTTCCA+TGG | - | Chr2:33739064-33739083 | MsG0280008543.01.T05:CDS | 45.0% | |
| CCCTTCAAGCATATCTTTCG+TGG | - | Chr2:33739116-33739135 | MsG0280008543.01.T05:CDS | 45.0% | |
| CTTGATGAATTCATGTGCGG+TGG | - | Chr2:33739654-33739673 | MsG0280008543.01.T05:CDS | 45.0% | |
| GTGCTCCGGTTGTAAGAAAA+AGG | - | Chr2:33739377-33739396 | MsG0280008543.01.T05:CDS | 45.0% | |
| GTGGTGAAGTACACTGAAGA+TGG | - | Chr2:33739355-33739374 | MsG0280008543.01.T05:CDS | 45.0% | |
| TACGAGACTATCTTTCGTGG+AGG | - | Chr2:33739920-33739939 | MsG0280008543.01.T02:CDS | 45.0% | |
| TCAAAGGACCTCACATACTC+CGG | + | Chr2:33739517-33739536 | None:intergenic | 45.0% | |
| TCTCGTACAATCTCAGCAGA+TGG | + | Chr2:33739907-33739926 | None:intergenic | 45.0% | |
| TGAACGCGGAATGAATGAGA+AGG | - | Chr2:33739195-33739214 | MsG0280008543.01.T05:CDS | 45.0% | |
| ! | ATACTCTTCAAGCACCGCAA+CGG | + | Chr2:33738876-33738895 | None:intergenic | 45.0% |
| ! | GTTTTTCATCAAGGATGCCC+GGG | + | Chr2:33740245-33740264 | None:intergenic | 45.0% |
| !! | CAAGTTGATGCCGTCTACAT+GGG | - | Chr2:33739546-33739565 | MsG0280008543.01.T05:CDS | 45.0% |
| !! | TTCTGGAAGCTTGTTGCATC+TGG | - | Chr2:33739982-33740001 | MsG0280008543.01.T02:CDS | 45.0% |
| !!! | GAAGGAGCTTGGTGTTTTTG+CGG | - | Chr2:33739471-33739490 | MsG0280008543.01.T05:CDS | 45.0% |
| !!! | TTTTGGCGACTTGTTGAACG+CGG | - | Chr2:33739181-33739200 | MsG0280008543.01.T05:CDS | 45.0% |
| ATGTGAAGCCGGAGTATGTG+AGG | - | Chr2:33739506-33739525 | MsG0280008543.01.T05:CDS | 50.0% | |
| CGAACGACAACCCATGTAGA+CGG | + | Chr2:33739559-33739578 | None:intergenic | 50.0% | |
| GAAGACAATGGTAGGGGATG+TGG | - | Chr2:33739336-33739355 | MsG0280008543.01.T05:CDS | 50.0% | |
| GAGAATGCAGTTCCATCTGC+GGG | + | Chr2:33739051-33739070 | None:intergenic | 50.0% | |
| GATCCTTGTCGGAACATCAC+AGG | + | Chr2:33740096-33740115 | None:intergenic | 50.0% | |
| GATGAATTCTTGCGCCGTTG+CGG | - | Chr2:33738859-33738878 | MsG0280008543.01.T05:CDS | 50.0% | |
| GCATCAATTCTTCCCGCAGA+TGG | - | Chr2:33739036-33739055 | MsG0280008543.01.T05:CDS | 50.0% | |
| GGAGAATGCAGTTCCATCTG+CGG | + | Chr2:33739052-33739071 | None:intergenic | 50.0% | |
| GTACACTGAAGATGGTGCTC+CGG | - | Chr2:33739363-33739382 | MsG0280008543.01.T05:CDS | 50.0% | |
| TGGGTTGTCGTTCGGATAGA+TGG | - | Chr2:33739565-33739584 | MsG0280008543.01.T05:CDS | 50.0% | |
| TTCAGAGCTCTGTCGTCGTT+TGG | + | Chr2:33739634-33739653 | None:intergenic | 50.0% | |
| ! | AGGGCATCTATAGCTGCACA+AGG | + | Chr2:33739100-33739119 | None:intergenic | 50.0% |
| ! | CGTCTACATGGGTTGTCGTT+CGG | - | Chr2:33739557-33739576 | MsG0280008543.01.T05:CDS | 50.0% |
| !! | AGCCTTTTGGTTGGAACACC+CGG | - | Chr2:33740224-33740243 | MsG0280008543.01.T02:CDS | 50.0% |
| !! | GCAAGTTGATGCCGTCTACA+TGG | - | Chr2:33739545-33739564 | MsG0280008543.01.T05:CDS | 50.0% |
| !! | GTGTTTTGAACTCGAGGACG+AGG | - | Chr2:33738757-33738776 | MsG0280008543.01.T05:CDS | 50.0% |
| CTGCCTGTGATGTTCCGACA+AGG | - | Chr2:33740090-33740109 | MsG0280008543.01.T02:CDS | 55.0% | |
| !! | GCCTTTTGGTTGGAACACCC+GGG | - | Chr2:33740225-33740244 | MsG0280008543.01.T02:CDS | 55.0% |
| !!! | GGAGCTTGGTGTTTTTGCGG+AGG | - | Chr2:33739474-33739493 | MsG0280008543.01.T05:CDS | 55.0% |
| GCCCGGGTGTTCCAACCAAA+AGG | + | Chr2:33740229-33740248 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr2 | gene | 33738728 | 33740287 | 33738728 | ID=MsG0280008543.01;Name=MsG0280008543.01 |
| Chr2 | mRNA | 33738728 | 33739810 | 33738728 | ID=MsG0280008543.01.T01;Parent=MsG0280008543.01;Name=MsG0280008543.01.T01;_AED=0.22;_eAED=0.22;_QI=0|0|0|1|0|0|2|0|293 |
| Chr2 | exon | 33738728 | 33739412 | 33738728 | ID=MsG0280008543.01.T01:exon:4443;Parent=MsG0280008543.01.T01 |
| Chr2 | exon | 33739614 | 33739810 | 33739614 | ID=MsG0280008543.01.T01:exon:4442;Parent=MsG0280008543.01.T01 |
| Chr2 | CDS | 33739614 | 33739810 | 33739614 | ID=MsG0280008543.01.T01:cds;Parent=MsG0280008543.01.T01 |
| Chr2 | CDS | 33738728 | 33739412 | 33738728 | ID=MsG0280008543.01.T01:cds;Parent=MsG0280008543.01.T01 |
| Chr2 | mRNA | 33738728 | 33740287 | 33738728 | ID=MsG0280008543.01.T02;Parent=MsG0280008543.01;Name=MsG0280008543.01.T02;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|519 |
| Chr2 | exon | 33738728 | 33740287 | 33738728 | ID=MsG0280008543.01.T02:exon:4444;Parent=MsG0280008543.01.T02 |
| Chr2 | CDS | 33738728 | 33740287 | 33738728 | ID=MsG0280008543.01.T02:cds;Parent=MsG0280008543.01.T02 |
| Chr2 | mRNA | 33738728 | 33740155 | 33738728 | ID=MsG0280008543.01.T03;Parent=MsG0280008543.01;Name=MsG0280008543.01.T03;_AED=0.05;_eAED=0.05;_QI=0|-1|0|1|-1|0|1|0|475 |
| Chr2 | exon | 33738728 | 33740155 | 33738728 | ID=MsG0280008543.01.T03:exon:4445;Parent=MsG0280008543.01.T03 |
| Chr2 | CDS | 33738728 | 33740155 | 33738728 | ID=MsG0280008543.01.T03:cds;Parent=MsG0280008543.01.T03 |
| Chr2 | mRNA | 33738728 | 33739960 | 33738728 | ID=MsG0280008543.01.T04;Parent=MsG0280008543.01;Name=MsG0280008543.01.T04;_AED=0.11;_eAED=0.11;_QI=0|-1|0|1|-1|0|1|0|410 |
| Chr2 | exon | 33738728 | 33739960 | 33738728 | ID=MsG0280008543.01.T04:exon:4446;Parent=MsG0280008543.01.T04 |
| Chr2 | CDS | 33738728 | 33739960 | 33738728 | ID=MsG0280008543.01.T04:cds;Parent=MsG0280008543.01.T04 |
| Chr2 | mRNA | 33738728 | 33739810 | 33738728 | ID=MsG0280008543.01.T05;Parent=MsG0280008543.01;Name=MsG0280008543.01.T05;_AED=0.16;_eAED=0.16;_QI=0|-1|0|1|-1|0|1|0|360 |
| Chr2 | exon | 33738728 | 33739810 | 33738728 | ID=MsG0280008543.01.T05:exon:4447;Parent=MsG0280008543.01.T05 |
| Chr2 | CDS | 33738728 | 33739810 | 33738728 | ID=MsG0280008543.01.T05:cds;Parent=MsG0280008543.01.T05 |
| Chr2 | mRNA | 33738728 | 33739462 | 33738728 | ID=MsG0280008543.01.T06;Parent=MsG0280008543.01;Name=MsG0280008543.01.T06;_AED=0.27;_eAED=0.27;_QI=0|-1|0|1|-1|0|1|0|244 |
| Chr2 | exon | 33738728 | 33739462 | 33738728 | ID=MsG0280008543.01.T06:exon:4448;Parent=MsG0280008543.01.T06 |
| Chr2 | CDS | 33738728 | 33739462 | 33738728 | ID=MsG0280008543.01.T06:cds;Parent=MsG0280008543.01.T06 |
| Chr2 | mRNA | 33738728 | 33739186 | 33738728 | ID=MsG0280008543.01.T07;Parent=MsG0280008543.01;Name=MsG0280008543.01.T07;_AED=0.36;_eAED=0.36;_QI=0|-1|0|1|-1|0|1|0|152 |
| Chr2 | exon | 33738728 | 33739186 | 33738728 | ID=MsG0280008543.01.T07:exon:4449;Parent=MsG0280008543.01.T07 |
| Chr2 | CDS | 33738728 | 33739186 | 33738728 | ID=MsG0280008543.01.T07:cds;Parent=MsG0280008543.01.T07 |
| Chr2 | mRNA | 33739054 | 33739131 | 33739054 | ID=MsG0280008543.01.T08;Parent=MsG0280008543.01;Name=MsG0280008543.01.T08;_AED=0.48;_eAED=1.00;_QI=0|-1|0|1|-1|0|1|0|25 |
| Chr2 | exon | 33739054 | 33739131 | 33739054 | ID=MsG0280008543.01.T08:exon:4450;Parent=MsG0280008543.01.T08 |
| Chr2 | CDS | 33739054 | 33739131 | 33739054 | ID=MsG0280008543.01.T08:cds;Parent=MsG0280008543.01.T08 |
| Gene Sequence |
| Protein sequence |
