AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280009748.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280009748.01.T01 MTR_2g064910 98.927 559 6 0 1 559 1 559 0.0 1150
MsG0280009748.01.T01 MTR_2g033460 38.845 502 278 6 6 493 153 639 7.33e-118 365
MsG0280009748.01.T02 MTR_2g064910 67.422 353 48 5 1 288 1 351 1.95e-156 448
MsG0280009748.01.T02 MTR_2g033460 32.479 234 142 4 56 288 265 483 1.84e-31 124
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280009748.01.T01 AT1G79030 70.107 562 160 6 3 558 1 560 0.0 753
MsG0280009748.01.T01 AT1G16680 68.694 559 166 5 3 558 1 553 0.0 739
MsG0280009748.01.T01 AT1G79030 74.707 427 100 6 138 558 1 425 0.0 626
MsG0280009748.01.T01 AT5G49580 38.593 526 263 11 30 530 175 665 3.68e-117 362
MsG0280009748.01.T01 AT5G49580 38.593 526 263 11 30 530 175 665 3.68e-117 362
MsG0280009748.01.T01 AT5G49580 35.309 405 213 8 30 417 175 547 1.75e-75 249
MsG0280009748.01.T02 AT1G79030 59.756 246 88 6 47 284 107 349 1.27e-84 265
MsG0280009748.01.T02 AT1G16680 55.466 247 102 4 47 288 107 350 2.12e-78 248
MsG0280009748.01.T02 AT1G79030 58.525 217 79 6 76 284 1 214 8.64e-72 228
MsG0280009748.01.T02 AT5G49580 30.392 204 113 4 56 259 263 437 8.54e-25 104
MsG0280009748.01.T02 AT5G49580 30.392 204 113 4 56 259 263 437 1.07e-24 104
MsG0280009748.01.T02 AT5G49580 30.392 204 113 4 56 259 263 437 1.07e-24 104

Find 180 sgRNAs with CRISPR-Local

Find 432 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAAAGGGTCATTGGATTTA+TGG 0.133402 2:+57495372 MsG0280009748.01.T01:five_prime_UTR
TGAAAGAAATGCAAGGTTTA+TGG 0.156009 2:-57497998 None:intergenic
TGTATCTCTGTTCTTATATT+AGG 0.158216 2:+57500768 MsG0280009748.01.T01:three_prime_UTR
GTGAACTGCTGTGGGATTTC+TGG 0.175841 2:-57499078 None:intergenic
ATGCAGGGGTTGCTCGAAAT+TGG 0.197102 2:+57495636 MsG0280009748.01.T01:CDS
TGATAAGCAGAAAGAAATTT+TGG 0.214983 2:+57498221 MsG0280009748.01.T01:CDS
GCACGCTTGGTGGTATTAAT+TGG 0.222439 2:+57497916 MsG0280009748.01.T01:CDS
CCACCAAGCGTGCACGATTT+AGG 0.231062 2:-57497906 None:intergenic
TCCGATTGCTTCTGCTCTTC+AGG 0.238239 2:-57498078 None:intergenic
ATTTATCCTAAACGGGTAAA+AGG 0.242249 2:+57494939 MsG0280009748.01.T01:five_prime_UTR
AGATGGATGGGTTGAATATA+AGG 0.245664 2:+57499578 MsG0280009748.01.T01:CDS
TGATCTCAGTAATCCATTTC+GGG 0.248137 2:-57500513 None:intergenic
TGGGAATCTACTTGAGTTAC+AGG 0.274469 2:-57500233 None:intergenic
TTGATCTCAGTAATCCATTT+CGG 0.284846 2:-57500514 None:intergenic
ATTGAAAGAGGGTATGAAAT+TGG 0.285370 2:-57494836 None:intergenic
GTTACTCACATTGATCATTA+AGG 0.285679 2:+57500698 MsG0280009748.01.T01:three_prime_UTR
GGTTTACGTGCTTGTTAGTA+TGG 0.289745 2:+57495798 MsG0280009748.01.T01:CDS
ATGAAGAAGAATATTGGATT+TGG 0.289824 2:-57494738 None:intergenic
AAAGAGAGAAAGAGGTAAAA+TGG 0.293629 2:-57495199 None:intergenic
GGTTGAATATAAGGGATCTT+TGG 0.299665 2:+57499587 MsG0280009748.01.T01:CDS
TAGGGTTGTTCAATCAAGTT+TGG 0.309311 2:+57495509 MsG0280009748.01.T01:CDS
AAGTAGATTCCCATGGGATT+TGG 0.312431 2:+57500243 MsG0280009748.01.T01:CDS
TTTCAGTCTTTCATTAAGTT+TGG 0.319308 2:+57495712 MsG0280009748.01.T01:CDS
CACCAAGCGTGCACGATTTA+GGG 0.330951 2:-57497905 None:intergenic
AGTGCGGTAATTCACATGTT+TGG 0.344384 2:+57499374 MsG0280009748.01.T01:CDS
GGTGACAGCAGGTGGTTTAC+TGG 0.344960 2:-57498187 None:intergenic
TGCAGGGGTTGCTCGAAATT+GGG 0.345633 2:+57495637 MsG0280009748.01.T01:CDS
GATCAAGGTTATTTATTTGA+TGG 0.350421 2:+57495326 MsG0280009748.01.T01:five_prime_UTR
TTGAAGTGATTTATCCTAAA+CGG 0.353634 2:+57494931 MsG0280009748.01.T01:five_prime_UTR
AAGAGAATGAAGAAGAATAT+TGG 0.355344 2:-57494744 None:intergenic
AGGATAAATCACTTCAATAA+AGG 0.355742 2:-57494925 None:intergenic
AAGCTCGGTCGGTGGGTGTT+AGG 0.357074 2:-57500175 None:intergenic
GTGAAATTTGTTGTAGATCA+AGG 0.358558 2:+57495311 MsG0280009748.01.T01:five_prime_UTR
GAAGATCAAGATTGAAACTT+TGG 0.363008 2:-57494808 None:intergenic
ATTTGACCTGTGGCTTCAAC+AGG 0.368409 2:+57500300 MsG0280009748.01.T01:CDS
AGGGTTGTTCAATCAAGTTT+GGG 0.374931 2:+57495510 MsG0280009748.01.T01:CDS
TTTACTCCATCCAATCCCTT+TGG 0.376262 2:-57500474 None:intergenic
CTTCAACAGGCTTTAGCATC+TGG 0.376602 2:+57500313 MsG0280009748.01.T01:CDS
GTCTTCATCCATCATCATTT+CGG 0.377560 2:-57500269 None:intergenic
TTACTCCATCCAATCCCTTT+GGG 0.377996 2:-57500473 None:intergenic
GTGCGGTAATTCACATGTTT+GGG 0.380056 2:+57499375 MsG0280009748.01.T01:CDS
TAGCATCACAAAAGGGTCAT+TGG 0.382212 2:+57495364 MsG0280009748.01.T01:five_prime_UTR
TCATGCAGGGAATGGCTTGT+AGG 0.396238 2:+57500152 MsG0280009748.01.T01:intron
TCATGGTGATGGAGGATATA+GGG 0.396369 2:+57495491 MsG0280009748.01.T01:exon
TGAAGTGATTTATCCTAAAC+GGG 0.401435 2:+57494932 MsG0280009748.01.T01:five_prime_UTR
TTCAAATTGCCTCAAAAGAA+AGG 0.403167 2:+57500379 MsG0280009748.01.T01:CDS
AGAAATGAAGAATGAGGAAA+AGG 0.404570 2:-57494782 None:intergenic
TGGTTACTAAGGATTTCTTT+TGG 0.406880 2:+57500813 MsG0280009748.01.T01:three_prime_UTR
GGCATTGGCCGATGGTATGC+AGG 0.413497 2:+57495620 MsG0280009748.01.T01:CDS
TTTGTTTAAGAAACCCGAAA+TGG 0.414667 2:+57500500 MsG0280009748.01.T01:three_prime_UTR
GTCTTGCTGAAAAGCTCAAT+AGG 0.415248 2:+57500423 MsG0280009748.01.T01:exon
ATCAAGTTTGGGGATGGCTT+CGG 0.416194 2:+57495521 MsG0280009748.01.T01:CDS
CTTAATCATTATGATGCCCT+TGG 0.419772 2:+57498306 MsG0280009748.01.T01:CDS
ATAAGAACAGAGATACAATA+AGG 0.420872 2:-57500762 None:intergenic
CCTAAATCGTGCACGCTTGG+TGG 0.422799 2:+57497906 MsG0280009748.01.T01:CDS
TGCTTTGGCCTTGCTCCTGT+TGG 0.422898 2:-57499404 None:intergenic
GATGGATGGGTTGAATATAA+GGG 0.424705 2:+57499579 MsG0280009748.01.T01:CDS
CTGTATCCGTCTGGATTCTT+CGG 0.424876 2:-57499344 None:intergenic
GACCTGACACCATCTTGCTT+TGG 0.429270 2:-57499419 None:intergenic
TGGAAGGACTCTGCTGTAAG+GGG 0.429309 2:+57495688 MsG0280009748.01.T01:CDS
GTCATGGTGATGGAGGATAT+AGG 0.429732 2:+57495490 MsG0280009748.01.T01:exon
ACTTTCATCAAGTTTGTAAG+TGG 0.432944 2:+57495456 MsG0280009748.01.T01:five_prime_UTR
AATTAAAGACTTCAAATTCA+CGG 0.434500 2:-57495255 None:intergenic
TTGGAAGGACTCTGCTGTAA+GGG 0.436084 2:+57495687 MsG0280009748.01.T01:CDS
GAAATGAAGAATGAGGAAAA+GGG 0.438569 2:-57494781 None:intergenic
CTCCCTAAATCGTGCACGCT+TGG 0.443827 2:+57497903 MsG0280009748.01.T01:CDS
GAAACTTCAATGTGCATATG+AGG 0.445625 2:+57498833 MsG0280009748.01.T01:CDS
CACAGTTCGAGCACGCCAAC+AGG 0.445831 2:-57495557 None:intergenic
TGCAAATTCTCAGATTCAAC+TGG 0.451152 2:-57498150 None:intergenic
TTGAATGTGAGAGTATTTAG+TGG 0.453509 2:+57495144 MsG0280009748.01.T01:five_prime_UTR
TTTGGAAGGACTCTGCTGTA+AGG 0.454087 2:+57495686 MsG0280009748.01.T01:CDS
TTACTGAGATCAAAACTAGA+AGG 0.456205 2:+57500524 MsG0280009748.01.T01:three_prime_UTR
CCAAGCCAACCATGTTTACA+TGG 0.459618 2:-57500198 None:intergenic
CTTTGTGCACTGTATCCGTC+TGG 0.460373 2:-57499353 None:intergenic
GGATTGAACAATGAAAACTT+TGG 0.461683 2:-57494717 None:intergenic
TGATGATTTAGCATCACAAA+AGG 0.463802 2:+57495356 MsG0280009748.01.T01:five_prime_UTR
TCTGACTTCGATGTATTGCT+TGG 0.466273 2:+57495777 MsG0280009748.01.T01:CDS
CCATGTAAACATGGTTGGCT+TGG 0.467923 2:+57500198 MsG0280009748.01.T01:CDS
TGAGGAAAAGGGGTTTCAAA+AGG 0.468417 2:-57494770 None:intergenic
TTCATTGCCTACATCCCAAA+GGG 0.469914 2:+57500459 MsG0280009748.01.T01:three_prime_UTR
AATATTTGATGTATCAGAAT+GGG 0.474275 2:+57499749 MsG0280009748.01.T01:CDS
ATCAAGGTTATTTATTTGAT+GGG 0.474990 2:+57495327 MsG0280009748.01.T01:five_prime_UTR
GAAGCAATCGGAGACAGTTA+TGG 0.475066 2:+57498089 MsG0280009748.01.T01:CDS
ATCCCACAGCAGTTCACATC+AGG 0.475853 2:+57499084 MsG0280009748.01.T01:CDS
TGTTCAATCAAGTTTGGGGA+TGG 0.476331 2:+57495515 MsG0280009748.01.T01:CDS
CTGTTGGCGTGCTCGAACTG+TGG 0.477803 2:+57495558 MsG0280009748.01.T01:CDS
TGCCTACATCCCAAAGGGAT+TGG 0.478963 2:+57500464 MsG0280009748.01.T01:three_prime_UTR
GGCCAAAGCAAGATGGTGTC+AGG 0.480599 2:+57499417 MsG0280009748.01.T01:CDS
CGATGTTTATTGAACGGCAT+TGG 0.480918 2:+57495605 MsG0280009748.01.T01:CDS
ATGTTTGGGTATGCACCAAC+AGG 0.481258 2:+57499389 MsG0280009748.01.T01:CDS
TCAGATTCAACTGGTGGGAT+AGG 0.484618 2:-57498141 None:intergenic
GAGAGTATTTAGTGGTATCA+TGG 0.485450 2:+57495152 MsG0280009748.01.T01:five_prime_UTR
GTAAAGAAAATTAGCAACCT+TGG 0.491284 2:-57500607 None:intergenic
ATCAGAATGGGCTATATGTC+AGG 0.494913 2:+57499761 MsG0280009748.01.T01:CDS
TCTTGCTGAAAAGCTCAATA+GGG 0.496208 2:+57500424 MsG0280009748.01.T01:exon
CCCTAAAATCTGATTGAAAG+AGG 0.500378 2:-57494848 None:intergenic
TTGAAAGAGGGTATGAAATT+GGG 0.503015 2:-57494835 None:intergenic
CAAGTAAAAGTGGGATGGCT+TGG 0.506505 2:+57497964 MsG0280009748.01.T01:CDS
ATCCAATCCCTTTGGGATGT+AGG 0.511524 2:-57500466 None:intergenic
AGCTTCCATGTAAACATGGT+TGG 0.511891 2:+57500193 MsG0280009748.01.T01:CDS
AAGTCTTTAATTTATGATGT+CGG 0.518300 2:+57495266 MsG0280009748.01.T01:five_prime_UTR
TCAAATTGCCTCAAAAGAAA+GGG 0.520660 2:+57500380 MsG0280009748.01.T01:CDS
TCCTGAAGAGCAGAAGCAAT+CGG 0.523623 2:+57498077 MsG0280009748.01.T01:CDS
CCTCAAAACGCAGGAAGAGT+TGG 0.527025 2:+57500350 MsG0280009748.01.T01:CDS
TTTATCCTAAACGGGTAAAA+GGG 0.529720 2:+57494940 MsG0280009748.01.T01:five_prime_UTR
TACATCCCAAAGGGATTGGA+TGG 0.530497 2:+57500468 MsG0280009748.01.T01:three_prime_UTR
ACCATGTTTACATGGAAGCT+CGG 0.530586 2:-57500190 None:intergenic
AAATATTTGATGTATCAGAA+TGG 0.531805 2:+57499748 MsG0280009748.01.T01:CDS
TGGAGCAGAAATGAAGAATG+AGG 0.539831 2:-57494788 None:intergenic
GTATTCTGTTCAAGTAAAAG+TGG 0.543915 2:+57497954 MsG0280009748.01.T01:CDS
TTAATTTATGATGTCGGAGT+AGG 0.544017 2:+57495272 MsG0280009748.01.T01:five_prime_UTR
GGTCATTGGATTTATGGTGA+TGG 0.544341 2:+57495378 MsG0280009748.01.T01:five_prime_UTR
TTTGGACGCCGAAATGATGA+TGG 0.545956 2:+57500261 MsG0280009748.01.T01:CDS
TATTGAACGGCATTGGCCGA+TGG 0.550013 2:+57495612 MsG0280009748.01.T01:CDS
GAGGAAAAGGGGTTTCAAAA+GGG 0.552128 2:-57494769 None:intergenic
AGCAAAGGATGGAGATGGAT+GGG 0.552152 2:+57499566 MsG0280009748.01.T01:CDS
ATTAAGAAAAGAAGAATCCA+TGG 0.556650 2:+57499042 MsG0280009748.01.T01:CDS
GATGATTTAGCATCACAAAA+GGG 0.556732 2:+57495357 MsG0280009748.01.T01:five_prime_UTR
CTAAAGCCTGTTGAAGCCAC+AGG 0.559744 2:-57500306 None:intergenic
GCATTGGCCGATGGTATGCA+GGG 0.560371 2:+57495621 MsG0280009748.01.T01:CDS
CATAAAATATATGTACACTA+AGG 0.560794 2:+57500643 MsG0280009748.01.T01:three_prime_UTR
ATTTCGGCGTCCAAATCCCA+TGG 0.562239 2:-57500253 None:intergenic
AAGCAAAGGATGGAGATGGA+TGG 0.562575 2:+57499565 MsG0280009748.01.T01:CDS
AAACTGCGATGTTTATTGAA+CGG 0.563453 2:+57495599 MsG0280009748.01.T01:CDS
TACATGGAAGCTCGGTCGGT+GGG 0.566355 2:-57500182 None:intergenic
GGAAGGACTCTGCTGTAAGG+GGG 0.567571 2:+57495689 MsG0280009748.01.T01:CDS
TACCTGATGTGAACTGCTGT+GGG 0.569328 2:-57499086 None:intergenic
CCTAAAATCTGATTGAAAGA+GGG 0.569348 2:-57494847 None:intergenic
ATATTTAGCGCAACATTGCA+AGG 0.571088 2:-57498478 None:intergenic
GCAGGGGTTGCTCGAAATTG+GGG 0.573947 2:+57495638 MsG0280009748.01.T01:CDS
CAGTTTCATCAAGCAAAGGA+TGG 0.576801 2:+57499555 MsG0280009748.01.T01:CDS
ATCTGTAGAGGTCATGGTGA+TGG 0.577651 2:+57495480 MsG0280009748.01.T01:exon
AAATGAAGAATGAGGAAAAG+GGG 0.582281 2:-57494780 None:intergenic
CATCAAGCAAAGGATGGAGA+TGG 0.583990 2:+57499561 MsG0280009748.01.T01:CDS
TGTCATTTGAAAGAAATGCA+AGG 0.588628 2:-57498005 None:intergenic
AAATTCTCAGATTCAACTGG+TGG 0.588839 2:-57498147 None:intergenic
CTGTCAGTTTCATCAAGCAA+AGG 0.589407 2:+57499551 MsG0280009748.01.T01:CDS
CTGTTCAAGTAAAAGTGGGA+TGG 0.589512 2:+57497959 MsG0280009748.01.T01:CDS
TTTGTGGCGGCTAAATCCAA+GGG 0.591814 2:-57498322 None:intergenic
GTGGTGAATTATAAGAGCCA+AGG 0.591876 2:+57500590 MsG0280009748.01.T01:three_prime_UTR
GAAATGCAAGGTTTATGGCA+AGG 0.596267 2:-57497993 None:intergenic
TGTTTACATGGAAGCTCGGT+CGG 0.599305 2:-57500186 None:intergenic
ATTCAATTGATGAAATGAGA+AGG 0.599840 2:+57498271 MsG0280009748.01.T01:CDS
TGTAGAGGTCATGGTGATGG+AGG 0.601487 2:+57495483 MsG0280009748.01.T01:exon
TTTCAGAACTGAGCATGAGT+CGG 0.608276 2:+57500722 MsG0280009748.01.T01:three_prime_UTR
TTACATGGAAGCTCGGTCGG+TGG 0.608397 2:-57500183 None:intergenic
TTTGCGAGTCCTCAAAACGC+AGG 0.609028 2:+57500341 MsG0280009748.01.T01:CDS
ACGAAGAGGCATTTGACCTG+TGG 0.610097 2:+57500290 MsG0280009748.01.T01:CDS
GAGCAACCCCTGCATACCAT+CGG 0.610183 2:-57495628 None:intergenic
TTACCTGATGTGAACTGCTG+TGG 0.612719 2:-57499087 None:intergenic
TATTCTGTTCAAGTAAAAGT+GGG 0.614296 2:+57497955 MsG0280009748.01.T01:CDS
GTAACTCAAGTAGATTCCCA+TGG 0.614310 2:+57500236 MsG0280009748.01.T01:CDS
GGAGCAAGGCCAAAGCAAGA+TGG 0.614781 2:+57499410 MsG0280009748.01.T01:CDS
AATTCTCAGATTCAACTGGT+GGG 0.617335 2:-57498146 None:intergenic
GGGTTGTTCAATCAAGTTTG+GGG 0.617373 2:+57495511 MsG0280009748.01.T01:CDS
TTATTAGCATGTATATACAA+AGG 0.617487 2:-57500837 None:intergenic
CTGCTTATCAACAACTGATG+TGG 0.617904 2:-57498208 None:intergenic
TTTGTAAGTGGAATCTGTAG+AGG 0.618896 2:+57495468 MsG0280009748.01.T01:five_prime_UTR
TGAGTAACTCCTATAAACCT+AGG 0.619287 2:-57500683 None:intergenic
ACAACTGATGTGGTGACAGC+AGG 0.620614 2:-57498198 None:intergenic
ATCTACTTGAGTTACAGGAA+TGG 0.621712 2:-57500228 None:intergenic
TTTCATTGCCTACATCCCAA+AGG 0.622491 2:+57500458 MsG0280009748.01.T01:three_prime_UTR
TAACTCAAGTAGATTCCCAT+GGG 0.623997 2:+57500237 MsG0280009748.01.T01:CDS
CTAAACGGGTAAAAGGGTCA+AGG 0.625600 2:+57494946 MsG0280009748.01.T01:five_prime_UTR
AGTGGAATCTGTAGAGGTCA+TGG 0.628752 2:+57495474 MsG0280009748.01.T01:exon
GGTATGCACCAACAGGAGCA+AGG 0.632037 2:+57499396 MsG0280009748.01.T01:CDS
CGGATACAGTGCACAAAGTG+CGG 0.640827 2:+57499358 MsG0280009748.01.T01:CDS
GATGATGGATGAAGACGAAG+AGG 0.646374 2:+57500276 MsG0280009748.01.T01:CDS
TTTCGGCGTCCAAATCCCAT+GGG 0.650751 2:-57500252 None:intergenic
AACAGAATACATAGCATATG+CGG 0.653102 2:-57497941 None:intergenic
TCCGCACAAACAAAAGCACG+TGG 0.655503 2:-57499720 None:intergenic
TGATGCTCTTGCTTATAATG+TGG 0.655740 2:+57495740 MsG0280009748.01.T01:CDS
CATTGGCCGATGGTATGCAG+GGG 0.658782 2:+57495622 MsG0280009748.01.T01:CDS
ACCGAGCTTCCATGTAAACA+TGG 0.658792 2:+57500189 MsG0280009748.01.T01:CDS
ATCGTTCCGAAGAATCCAGA+CGG 0.659900 2:+57499338 MsG0280009748.01.T01:CDS
GGTCACGAAAAGATGCCTGT+TGG 0.663139 2:+57495542 MsG0280009748.01.T01:CDS
ACTGATGTGGTGACAGCAGG+TGG 0.695798 2:-57498195 None:intergenic
GATGAGTCATGAGAGCATTG+TGG 0.727305 2:+57500571 MsG0280009748.01.T01:three_prime_UTR
CCGCACAAACAAAAGCACGT+GGG 0.749499 2:-57499719 None:intergenic
TTTAGCGCAACATTGCAAGG+TGG 0.757506 2:-57498475 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTAAATTATTATATAAATT+AGG - Chr2:57497772-57497791 None:intergenic 0.0%
!!! TTTTAATGAAAATTCATAAA+TGG - Chr2:57495898-57495917 None:intergenic 10.0%
!! AAAGCATAAAAAATTGAAAA+TGG - Chr2:57497232-57497251 None:intergenic 15.0%
!! AAGCATAAAAAATTGAAAAT+GGG - Chr2:57497231-57497250 None:intergenic 15.0%
!! AAGGAAAAAAAAAATCAAAT+AGG - Chr2:57497181-57497200 None:intergenic 15.0%
!! CTATCTTATAATTGATATAT+TGG + Chr2:57498883-57498902 MsG0280009748.01.T01:intron 15.0%
!! TCCTAATAGATTATATATTA+AGG - Chr2:57499185-57499204 None:intergenic 15.0%
!! TCCTTAATATATAATCTATT+AGG + Chr2:57499181-57499200 MsG0280009748.01.T01:intron 15.0%
!! TTGAACAATTAAAGAAAAAA+AGG + Chr2:57499289-57499308 MsG0280009748.01.T01:intron 15.0%
!! TTTAATATTTGTTTGTGTTT+GGG + Chr2:57497149-57497168 MsG0280009748.01.T01:intron 15.0%
!!! ATTATACAAATTTTATGTAG+AGG + Chr2:57496062-57496081 MsG0280009748.01.T01:intron 15.0%
!!! ATTTTAAGAAAAAAAGTCAA+AGG - Chr2:57496034-57496053 None:intergenic 15.0%
!!! TATTATAAGAACTTTTAACA+AGG - Chr2:57497679-57497698 None:intergenic 15.0%
!!! TTATATTGAAATTTTGATTC+TGG + Chr2:57496806-57496825 MsG0280009748.01.T01:intron 15.0%
!!! TTTTCAATTTTTTATGCTTT+TGG + Chr2:57497232-57497251 MsG0280009748.01.T01:intron 15.0%
!!! TTTTTCTTTAATTGTTCAAA+AGG - Chr2:57499288-57499307 None:intergenic 15.0%
!! AAATATTTGATGTATCAGAA+TGG + Chr2:57499748-57499767 MsG0280009748.01.T01:CDS 20.0%
!! AACAACATATTTAACACTAA+AGG - Chr2:57497101-57497120 None:intergenic 20.0%
!! AATATTTGATGTATCAGAAT+GGG + Chr2:57499749-57499768 MsG0280009748.01.T01:CDS 20.0%
!! AATTAAAGACTTCAAATTCA+CGG - Chr2:57495258-57495277 None:intergenic 20.0%
!! AGTTCTTATAATAAAGTCAT+TGG + Chr2:57497686-57497705 MsG0280009748.01.T01:intron 20.0%
!! ATCAAGGTTATTTATTTGAT+GGG + Chr2:57495327-57495346 MsG0280009748.01.T01:five_prime_UTR 20.0%
!! CATAAAATATATGTACACTA+AGG + Chr2:57500643-57500662 MsG0280009748.01.T01:three_prime_UTR 20.0%
!! GTTAATATAATGTTCTATGA+CGG + Chr2:57497599-57497618 MsG0280009748.01.T01:intron 20.0%
!! GTTCTTATAATAAAGTCATT+GGG + Chr2:57497687-57497706 MsG0280009748.01.T01:intron 20.0%
!! GTTTAATATTTGTTTGTGTT+TGG + Chr2:57497148-57497167 MsG0280009748.01.T01:intron 20.0%
!! TTATTAGCATGTATATACAA+AGG - Chr2:57500840-57500859 None:intergenic 20.0%
!!! AAGTCTTTAATTTATGATGT+CGG + Chr2:57495266-57495285 MsG0280009748.01.T01:five_prime_UTR 20.0%
!!! AATTTGAGTTCAAAATATTG+TGG + Chr2:57496339-57496358 MsG0280009748.01.T01:intron 20.0%
!!! ACATTTTACAATTACCTTAT+TGG + Chr2:57495967-57495986 MsG0280009748.01.T01:intron 20.0%
!!! ATGAATTTTCATTAAAACTG+CGG + Chr2:57495901-57495920 MsG0280009748.01.T01:intron 20.0%
!!! ATGATTTTAATTTATCTCTG+TGG + Chr2:57496261-57496280 MsG0280009748.01.T01:intron 20.0%
!!! CAATATTTTGAACTCAAATT+AGG - Chr2:57496339-57496358 None:intergenic 20.0%
!!! CTTAGTGTACATATATTTTA+TGG - Chr2:57500645-57500664 None:intergenic 20.0%
!!! TATTTTATGGATATGAAATG+TGG - Chr2:57500632-57500651 None:intergenic 20.0%
!!! TGATACATTAGTTTGTTTAT+AGG + Chr2:57500088-57500107 MsG0280009748.01.T01:intron 20.0%
!!! TTACATTATCGTTGATTTTT+TGG + Chr2:57495668-57495687 MsG0280009748.01.T01:CDS 20.0%
!!! TTCAAGTTCATATTTTTGAT+GGG + Chr2:57494894-57494913 MsG0280009748.01.T01:five_prime_UTR 20.0%
!!! TTTTAACAAGGATGAAAAAA+TGG - Chr2:57497667-57497686 None:intergenic 20.0%
!!! TTTTGATGATGTTTTAGTTT+TGG + Chr2:57495415-57495434 MsG0280009748.01.T01:five_prime_UTR 20.0%
! AAAAGTAAAAAATCCTACCT+AGG - Chr2:57497357-57497376 None:intergenic 25.0%
! AAACAAAATTTCAGGATTGT+AGG - Chr2:57497856-57497875 None:intergenic 25.0%
! AAGAGAATGAAGAAGAATAT+TGG - Chr2:57494747-57494766 None:intergenic 25.0%
! AATAATCATGCAACAGAAAA+AGG - Chr2:57497200-57497219 None:intergenic 25.0%
! AGGATAAATCACTTCAATAA+AGG - Chr2:57494928-57494947 None:intergenic 25.0%
! AGTAAGAACAAAAATTCAGA+CGG - Chr2:57495842-57495861 None:intergenic 25.0%
! AGTGTATACAATACAAAAGA+CGG - Chr2:57496687-57496706 None:intergenic 25.0%
! AGTTAATACCACATTACTAT+AGG - Chr2:57498510-57498529 None:intergenic 25.0%
! ATAAGAACAGAGATACAATA+AGG - Chr2:57500765-57500784 None:intergenic 25.0%
! ATGAAGAAGAATATTGGATT+TGG - Chr2:57494741-57494760 None:intergenic 25.0%
! ATTAAGAAAAGAAGAATCCA+TGG + Chr2:57499042-57499061 MsG0280009748.01.T01:CDS 25.0%
! ATTCAATTGATGAAATGAGA+AGG + Chr2:57498271-57498290 MsG0280009748.01.T01:CDS 25.0%
! ATTGTTCAAAAGGTAAATGA+AGG - Chr2:57499278-57499297 None:intergenic 25.0%
! CATCAAAAATATGAACTTGA+AGG - Chr2:57494895-57494914 None:intergenic 25.0%
! GATCAAGGTTATTTATTTGA+TGG + Chr2:57495326-57495345 MsG0280009748.01.T01:five_prime_UTR 25.0%
! TAAAATCCACAAACTCAAAA+TGG - Chr2:57497063-57497082 None:intergenic 25.0%
! TATTCTGTTCAAGTAAAAGT+GGG + Chr2:57497955-57497974 MsG0280009748.01.T01:CDS 25.0%
! TGATTGACAAACAAAATTTC+AGG - Chr2:57497864-57497883 None:intergenic 25.0%
! TGGAATTTACAAGAATATGT+CGG - Chr2:57499137-57499156 None:intergenic 25.0%
! TGTATCTCTGTTCTTATATT+AGG + Chr2:57500768-57500787 MsG0280009748.01.T01:three_prime_UTR 25.0%
! TTCAAAATTTAGGAGAGTAA+TGG + Chr2:57496139-57496158 MsG0280009748.01.T01:intron 25.0%
! TTGAAGTGATTTATCCTAAA+CGG + Chr2:57494931-57494950 MsG0280009748.01.T01:five_prime_UTR 25.0%
! TTGTTCAAAAGGTAAATGAA+GGG - Chr2:57499277-57499296 None:intergenic 25.0%
! TTTCAGTCTTTCATTAAGTT+TGG + Chr2:57495712-57495731 MsG0280009748.01.T01:CDS 25.0%
!! ACATTGTGTTTTGTGAAAAA+GGG + Chr2:57495024-57495043 MsG0280009748.01.T01:five_prime_UTR 25.0%
!! ATTACTCTCCTAAATTTTGA+AGG - Chr2:57496140-57496159 None:intergenic 25.0%
!! ATTTTTGACCTATAGTAATG+TGG + Chr2:57498499-57498518 MsG0280009748.01.T01:intron 25.0%
!! CTGAATTTTTGTTCTTACTT+TGG + Chr2:57495843-57495862 MsG0280009748.01.T01:intron 25.0%
!! TACTCTACAAGCAATATTTT+TGG + Chr2:57499790-57499809 MsG0280009748.01.T01:intron 25.0%
!! TATTAACTAGCTGACTTAAT+GGG + Chr2:57498522-57498541 MsG0280009748.01.T01:intron 25.0%
!! TGATAAGCAGAAAGAAATTT+TGG + Chr2:57498221-57498240 MsG0280009748.01.T01:CDS 25.0%
!! TGTTATCATTTTCATCATGT+AGG + Chr2:57498752-57498771 MsG0280009748.01.T01:intron 25.0%
!! TTACTCTCCTAAATTTTGAA+GGG - Chr2:57496139-57496158 None:intergenic 25.0%
!! TTCTTTTGCATTGTAATGAA+CGG - Chr2:57499250-57499269 None:intergenic 25.0%
!! TTTTAGGCTTTTATGAATAG+TGG + Chr2:57495074-57495093 MsG0280009748.01.T01:five_prime_UTR 25.0%
!! TTTTGAATTTTCTGCTTCAA+TGG + Chr2:57498028-57498047 MsG0280009748.01.T01:CDS 25.0%
!!! ATAGTGTTAGATTTTTCAGT+AGG + Chr2:57494972-57494991 MsG0280009748.01.T01:five_prime_UTR 25.0%
!!! ATATTCTAGAATGACCAATA+AGG - Chr2:57495984-57496003 None:intergenic 25.0%
!!! ATGATGCTTTTATTGTTGTT+TGG + Chr2:57496600-57496619 MsG0280009748.01.T01:intron 25.0%
!!! ATTATCGTTGATTTTTTGGA+AGG + Chr2:57495672-57495691 MsG0280009748.01.T01:CDS 25.0%
!!! CATTGAGTTCTAATTTTAGT+CGG + Chr2:57496233-57496252 MsG0280009748.01.T01:intron 25.0%
!!! CTTCAAGTTCATATTTTTGA+TGG + Chr2:57494893-57494912 MsG0280009748.01.T01:five_prime_UTR 25.0%
!!! CTTTGTGTTGTTTTGTTTTT+AGG + Chr2:57495058-57495077 MsG0280009748.01.T01:five_prime_UTR 25.0%
!!! TACAAAGTATTGTCAAATAG+CGG + Chr2:57499924-57499943 MsG0280009748.01.T01:intron 25.0%
!!! TACTGTTCAAGTTTTTAAGA+AGG - Chr2:57498647-57498666 None:intergenic 25.0%
!!! TAGTGTTAGATTTTTCAGTA+GGG + Chr2:57494973-57494992 MsG0280009748.01.T01:five_prime_UTR 25.0%
!!! TGATGCTTTTATTGTTGTTT+GGG + Chr2:57496601-57496620 MsG0280009748.01.T01:intron 25.0%
!!! TTCTGATTTGTATTTTAAGC+AGG + Chr2:57497279-57497298 MsG0280009748.01.T01:intron 25.0%
!!! TTGAAAAGTTTTGTAAAGAG+AGG - Chr2:57494636-57494655 None:intergenic 25.0%
!!! TTTTGAGTTTGTGGATTTTA+AGG + Chr2:57497063-57497082 MsG0280009748.01.T01:intron 25.0%
!!! TTTTTGCTATCCTTATTTTG+TGG + Chr2:57496529-57496548 MsG0280009748.01.T01:CDS 25.0%
AAAAGAAAGGGAAAAAGCAA+TGG + Chr2:57500392-57500411 MsG0280009748.01.T01:CDS 30.0%
AAACTGCGATGTTTATTGAA+CGG + Chr2:57495599-57495618 MsG0280009748.01.T01:CDS 30.0%
AAAGAGAGAAAGAGGTAAAA+TGG - Chr2:57495202-57495221 None:intergenic 30.0%
AAATCAGAACTAATCTGAAC+TGG - Chr2:57497268-57497287 None:intergenic 30.0%
AAATGAAGAATGAGGAAAAG+GGG - Chr2:57494783-57494802 None:intergenic 30.0%
AACAGAATACATAGCATATG+CGG - Chr2:57497944-57497963 None:intergenic 30.0%
AAGTTTCATCCTTGTTAAAG+AGG - Chr2:57498977-57498996 None:intergenic 30.0%
AATCCAAAAAAGAGAGAAAG+AGG - Chr2:57495210-57495229 None:intergenic 30.0%
ACAAAAGACGGATATACAAT+AGG - Chr2:57496675-57496694 None:intergenic 30.0%
ACAGTTCAATTGAATGTTTC+AGG + Chr2:57496446-57496465 MsG0280009748.01.T01:intron 30.0%
ACTTTCATCAAGTTTGTAAG+TGG + Chr2:57495456-57495475 MsG0280009748.01.T01:five_prime_UTR 30.0%
AGAAATGAAGAATGAGGAAA+AGG - Chr2:57494785-57494804 None:intergenic 30.0%
ATGAAATAAAGTAGGTTGTC+AGG - Chr2:57500136-57500155 None:intergenic 30.0%
ATTTATCCTAAACGGGTAAA+AGG + Chr2:57494939-57494958 MsG0280009748.01.T01:five_prime_UTR 30.0%
CCTAAAATCTGATTGAAAGA+GGG - Chr2:57494850-57494869 None:intergenic 30.0%
GAAATGAAGAATGAGGAAAA+GGG - Chr2:57494784-57494803 None:intergenic 30.0%
GAAATTAAGAGAAAGAAGGA+AGG - Chr2:57499479-57499498 None:intergenic 30.0%
GAAGATCAAGATTGAAACTT+TGG - Chr2:57494811-57494830 None:intergenic 30.0%
GATGATTTAGCATCACAAAA+GGG + Chr2:57495357-57495376 MsG0280009748.01.T01:five_prime_UTR 30.0%
GCATGAAATTAAGAGAAAGA+AGG - Chr2:57499483-57499502 None:intergenic 30.0%
GGATTGAACAATGAAAACTT+TGG - Chr2:57494720-57494739 None:intergenic 30.0%
GTAAAGAAAATTAGCAACCT+TGG - Chr2:57500610-57500629 None:intergenic 30.0%
GTAAGAACAAAAATTCAGAC+GGG - Chr2:57495841-57495860 None:intergenic 30.0%
GTATTCTGTTCAAGTAAAAG+TGG + Chr2:57497954-57497973 MsG0280009748.01.T01:CDS 30.0%
GTGCATCCTGATAAAAATAT+GGG + Chr2:57498783-57498802 MsG0280009748.01.T01:CDS 30.0%
GTTACTCACATTGATCATTA+AGG + Chr2:57500698-57500717 MsG0280009748.01.T01:three_prime_UTR 30.0%
TCAAATTGCCTCAAAAGAAA+GGG + Chr2:57500380-57500399 MsG0280009748.01.T01:CDS 30.0%
TCAATGCAAATCCAATCAAA+TGG - Chr2:57500071-57500090 None:intergenic 30.0%
TGAAAGAAATGCAAGGTTTA+TGG - Chr2:57498001-57498020 None:intergenic 30.0%
TGAAGTGATTTATCCTAAAC+GGG + Chr2:57494932-57494951 MsG0280009748.01.T01:five_prime_UTR 30.0%
TGATGAAAATGATAACAAGC+TGG - Chr2:57498749-57498768 None:intergenic 30.0%
TGATGATTTAGCATCACAAA+AGG + Chr2:57495356-57495375 MsG0280009748.01.T01:five_prime_UTR 30.0%
TTAATTTATGATGTCGGAGT+AGG + Chr2:57495272-57495291 MsG0280009748.01.T01:five_prime_UTR 30.0%
TTACTGAGATCAAAACTAGA+AGG + Chr2:57500524-57500543 MsG0280009748.01.T01:three_prime_UTR 30.0%
TTCAAATTGCCTCAAAAGAA+AGG + Chr2:57500379-57500398 MsG0280009748.01.T01:CDS 30.0%
TTGATCTCAGTAATCCATTT+CGG - Chr2:57500517-57500536 None:intergenic 30.0%
TTGCTACCACTTCATTATAT+TGG + Chr2:57497466-57497485 MsG0280009748.01.T01:intron 30.0%
TTTATCCTAAACGGGTAAAA+GGG + Chr2:57494940-57494959 MsG0280009748.01.T01:five_prime_UTR 30.0%
TTTGTTTAAGAAACCCGAAA+TGG + Chr2:57500500-57500519 MsG0280009748.01.T01:three_prime_UTR 30.0%
! AAATTTAGGAGAGTAATGGA+TGG + Chr2:57496143-57496162 MsG0280009748.01.T01:intron 30.0%
! AACCTACTTTATTTCATGCA+GGG + Chr2:57500139-57500158 MsG0280009748.01.T01:intron 30.0%
! ATTGAAAGAGGGTATGAAAT+TGG - Chr2:57494839-57494858 None:intergenic 30.0%
! CCTCTTTCAATCAGATTTTA+GGG + Chr2:57494848-57494867 MsG0280009748.01.T01:five_prime_UTR 30.0%
! GACATTGTGTTTTGTGAAAA+AGG + Chr2:57495023-57495042 MsG0280009748.01.T01:five_prime_UTR 30.0%
! GCTTTAAGCTTATCATTCAA+TGG + Chr2:57495937-57495956 MsG0280009748.01.T01:intron 30.0%
! GGATTTTGTCTTGAGTATAT+GGG + Chr2:57497708-57497727 MsG0280009748.01.T01:intron 30.0%
! GTATTAACTAGCTGACTTAA+TGG + Chr2:57498521-57498540 MsG0280009748.01.T01:intron 30.0%
! TAACGATGAATACCTTTTTC+CGG - Chr2:57498380-57498399 None:intergenic 30.0%
! TAGGGTTTTTCACTGTAAAA+GGG + Chr2:57494866-57494885 MsG0280009748.01.T01:five_prime_UTR 30.0%
! TATCAAAAGTGCAAAAACCT+AGG + Chr2:57500666-57500685 MsG0280009748.01.T01:three_prime_UTR 30.0%
! TGGTTACTAAGGATTTCTTT+TGG + Chr2:57500813-57500832 MsG0280009748.01.T01:three_prime_UTR 30.0%
! TGTCATTTGAAAGAAATGCA+AGG - Chr2:57498008-57498027 None:intergenic 30.0%
! TTAGGGTTTTTCACTGTAAA+AGG + Chr2:57494865-57494884 MsG0280009748.01.T01:five_prime_UTR 30.0%
! TTGAAAGAGGGTATGAAATT+GGG - Chr2:57494838-57494857 None:intergenic 30.0%
!! AAAAAAAGGTACTCTATTGC+AGG + Chr2:57499303-57499322 MsG0280009748.01.T01:intron 30.0%
!! GGTCATTCTAGAATATAAAG+TGG + Chr2:57495988-57496007 MsG0280009748.01.T01:intron 30.0%
!! GTGAAATTTGTTGTAGATCA+AGG + Chr2:57495311-57495330 MsG0280009748.01.T01:five_prime_UTR 30.0%
!! TTGAATGTGAGAGTATTTAG+TGG + Chr2:57495144-57495163 MsG0280009748.01.T01:five_prime_UTR 30.0%
!!! ATGAATAGTGGTTGCTTTTT+TGG + Chr2:57495086-57495105 MsG0280009748.01.T01:five_prime_UTR 30.0%
!!! CAGTTTTGAAAAAGGAATAC+CGG + Chr2:57498358-57498377 MsG0280009748.01.T01:CDS 30.0%
!!! GCTTTTTTGGAAGCTTATTT+CGG + Chr2:57495099-57495118 MsG0280009748.01.T01:five_prime_UTR 30.0%
!!! TTACCTCTTTCTCTCTTTTT+TGG + Chr2:57495204-57495223 MsG0280009748.01.T01:five_prime_UTR 30.0%
!!! TTAGAAAGTGCTCTTTTCAA+TGG + Chr2:57500793-57500812 MsG0280009748.01.T01:three_prime_UTR 30.0%
!!! TTCTTTTGAGGCAATTTGAA+TGG - Chr2:57500379-57500398 None:intergenic 30.0%
AAATAGAAGCTAAGCCTCTT+TGG - Chr2:57497528-57497547 None:intergenic 35.0%
AAATCCTACCTAGGATAATG+AGG - Chr2:57497348-57497367 None:intergenic 35.0%
AAATTCTCAGATTCAACTGG+TGG - Chr2:57498150-57498169 None:intergenic 35.0%
AATACTTGGGTTATACTCCT+GGG + Chr2:57496490-57496509 MsG0280009748.01.T01:CDS 35.0%
AATTCTCAGATTCAACTGGT+GGG - Chr2:57498149-57498168 None:intergenic 35.0%
ACAGGATTACTACTCATAGT+TGG + Chr2:57496573-57496592 MsG0280009748.01.T01:CDS 35.0%
ACTCCACTATCAAAATTGTG+AGG + Chr2:57496704-57496723 MsG0280009748.01.T01:intron 35.0%
AGAAGTGAGAACACTGTAAT+GGG - Chr2:57497811-57497830 None:intergenic 35.0%
AGGGTTGTTCAATCAAGTTT+GGG + Chr2:57495510-57495529 MsG0280009748.01.T01:CDS 35.0%
ATATTTAGCGCAACATTGCA+AGG - Chr2:57498481-57498500 None:intergenic 35.0%
ATCTACTTGAGTTACAGGAA+TGG - Chr2:57500231-57500250 None:intergenic 35.0%
ATCTCATAGGTAATCCAACA+CGG - Chr2:57496771-57496790 None:intergenic 35.0%
CAAAAGGGTCATTGGATTTA+TGG + Chr2:57495372-57495391 MsG0280009748.01.T01:five_prime_UTR 35.0%
CAACGACCAATATAATGAAG+TGG - Chr2:57497475-57497494 None:intergenic 35.0%
CCCTAAAATCTGATTGAAAG+AGG - Chr2:57494851-57494870 None:intergenic 35.0%
CGTGCATCCTGATAAAAATA+TGG + Chr2:57498782-57498801 MsG0280009748.01.T01:CDS 35.0%
CTTAATCATTATGATGCCCT+TGG + Chr2:57498306-57498325 MsG0280009748.01.T01:CDS 35.0%
CTTATGATTCTTCAAACTCG+TGG - Chr2:57499157-57499176 None:intergenic 35.0%
GAAAAAGGAATACCGGAAAA+AGG + Chr2:57498365-57498384 MsG0280009748.01.T01:CDS 35.0%
GAAACTTCAATGTGCATATG+AGG + Chr2:57498833-57498852 MsG0280009748.01.T01:CDS 35.0%
GCTTTGATCTTGTCTTTCAT+AGG + Chr2:57499689-57499708 MsG0280009748.01.T01:intron 35.0%
GGTTGAATATAAGGGATCTT+TGG + Chr2:57499587-57499606 MsG0280009748.01.T01:CDS 35.0%
GTCTTCATCCATCATCATTT+CGG - Chr2:57500272-57500291 None:intergenic 35.0%
GTGCAAAAACCTAGGTTTAT+AGG + Chr2:57500674-57500693 MsG0280009748.01.T01:three_prime_UTR 35.0%
TAACTCAAGTAGATTCCCAT+GGG + Chr2:57500237-57500256 MsG0280009748.01.T01:CDS 35.0%
TAATCCTGTGATCAGAAAGT+TGG - Chr2:57496562-57496581 None:intergenic 35.0%
TAGGGTTGTTCAATCAAGTT+TGG + Chr2:57495509-57495528 MsG0280009748.01.T01:CDS 35.0%
TAGTGACCATAAAAGAAGAG+AGG + Chr2:57496644-57496663 MsG0280009748.01.T01:intron 35.0%
TCCAGAGAAGATGTAAATTC+AGG - Chr2:57499521-57499540 None:intergenic 35.0%
TCCTGAATTTACATCTTCTC+TGG + Chr2:57499517-57499536 MsG0280009748.01.T01:intron 35.0%
TCTTGCTGAAAAGCTCAATA+GGG + Chr2:57500424-57500443 MsG0280009748.01.T01:exon 35.0%
TGAGTAACTCCTATAAACCT+AGG - Chr2:57500686-57500705 None:intergenic 35.0%
TGATCAGTGTTGTCAAATAG+CGG + Chr2:57499834-57499853 MsG0280009748.01.T01:intron 35.0%
TGATCTCAGTAATCCATTTC+GGG - Chr2:57500516-57500535 None:intergenic 35.0%
TGATGCTCTTGCTTATAATG+TGG + Chr2:57495740-57495759 MsG0280009748.01.T01:CDS 35.0%
TGCAAATTCTCAGATTCAAC+TGG - Chr2:57498153-57498172 None:intergenic 35.0%
TGCATTGTAATGAACGGATA+TGG - Chr2:57499244-57499263 None:intergenic 35.0%
TGGCATACATCCACAAAATA+AGG - Chr2:57496542-57496561 None:intergenic 35.0%
TGTGAGAAGCAATGTATTCT+TGG - Chr2:57496429-57496448 None:intergenic 35.0%
TGTTGGATTACCTATGAGAT+CGG + Chr2:57496771-57496790 MsG0280009748.01.T01:intron 35.0%
TTAACAAGGATGAAACTTCC+AGG + Chr2:57498979-57498998 MsG0280009748.01.T01:intron 35.0%
TTCCCTGCATGAAATAAAGT+AGG - Chr2:57500144-57500163 None:intergenic 35.0%
TTTGTAAGTGGAATCTGTAG+AGG + Chr2:57495468-57495487 MsG0280009748.01.T01:five_prime_UTR 35.0%
! AAGAGTGTAGTACACAAGAA+AGG - Chr2:57497747-57497766 None:intergenic 35.0%
! ACTTTATTTCATGCAGGGAA+TGG + Chr2:57500144-57500163 MsG0280009748.01.T01:intron 35.0%
! AGTACACAAGAAAGGCATAT+GGG - Chr2:57497739-57497758 None:intergenic 35.0%
! CAACCTACTTTATTTCATGC+AGG + Chr2:57500138-57500157 MsG0280009748.01.T01:intron 35.0%
! CACTGTTTTCCTCTTTAACA+AGG + Chr2:57498965-57498984 MsG0280009748.01.T01:intron 35.0%
! CCCTCTTTCAATCAGATTTT+AGG + Chr2:57494847-57494866 MsG0280009748.01.T01:five_prime_UTR 35.0%
! GCATATCCTCTCTTCTTTTA+TGG - Chr2:57496653-57496672 None:intergenic 35.0%
! GCTCTTTTCAATGGTTACTA+AGG + Chr2:57500802-57500821 MsG0280009748.01.T01:three_prime_UTR 35.0%
! GGGATTTTGTCTTGAGTATA+TGG + Chr2:57497707-57497726 MsG0280009748.01.T01:intron 35.0%
! TAGTACACAAGAAAGGCATA+TGG - Chr2:57497740-57497759 None:intergenic 35.0%
! TGTCTGCTCTTTTACAACTT+TGG - Chr2:57498250-57498269 None:intergenic 35.0%
! TGTGTTTTGTGAAAAAGGGA+TGG + Chr2:57495028-57495047 MsG0280009748.01.T01:five_prime_UTR 35.0%
! TTTTGTAAAGAGAGGAGTGA+GGG - Chr2:57494628-57494647 None:intergenic 35.0%
!! AGATGGATGGGTTGAATATA+AGG + Chr2:57499578-57499597 MsG0280009748.01.T01:CDS 35.0%
!! GAACTGCCCATATTTTTATC+AGG - Chr2:57498792-57498811 None:intergenic 35.0%
!! GAGAGTATTTAGTGGTATCA+TGG + Chr2:57495152-57495171 MsG0280009748.01.T01:five_prime_UTR 35.0%
!! GATGGATGGGTTGAATATAA+GGG + Chr2:57499579-57499598 MsG0280009748.01.T01:CDS 35.0%
!!! TAGTTTTGGTCTTAGTAGTG+AGG + Chr2:57495429-57495448 MsG0280009748.01.T01:five_prime_UTR 35.0%
!!! TGCTTTTTCCCTTTCTTTTG+AGG - Chr2:57500391-57500410 None:intergenic 35.0%
AACTCAAAATGGTGCTCATC+AGG - Chr2:57497052-57497071 None:intergenic 40.0%
AAGTAGATTCCCATGGGATT+TGG + Chr2:57500243-57500262 MsG0280009748.01.T01:CDS 40.0%
ACCATGTTTACATGGAAGCT+CGG - Chr2:57500193-57500212 None:intergenic 40.0%
AGCTTCCATGTAAACATGGT+TGG + Chr2:57500193-57500212 MsG0280009748.01.T01:CDS 40.0%
AGGAGGAAAGCTTGTAACTT+AGG - Chr2:57497328-57497347 None:intergenic 40.0%
AGGTAATCCAACACGGTTTA+GGG - Chr2:57496764-57496783 None:intergenic 40.0%
AGTAGACTGAGTACCAAATC+AGG - Chr2:57500034-57500053 None:intergenic 40.0%
AGTGCGGTAATTCACATGTT+TGG + Chr2:57499374-57499393 MsG0280009748.01.T01:CDS 40.0%
ATCAAATGGAACACTGTCTC+TGG - Chr2:57500057-57500076 None:intergenic 40.0%
CAATACTTGGGTTATACTCC+TGG + Chr2:57496489-57496508 MsG0280009748.01.T01:CDS 40.0%
CAGTTTCATCAAGCAAAGGA+TGG + Chr2:57499555-57499574 MsG0280009748.01.T01:CDS 40.0%
CGATGTTTATTGAACGGCAT+TGG + Chr2:57495605-57495624 MsG0280009748.01.T01:CDS 40.0%
CTGCTTATCAACAACTGATG+TGG - Chr2:57498211-57498230 None:intergenic 40.0%
CTGTCAGTTTCATCAAGCAA+AGG + Chr2:57499551-57499570 MsG0280009748.01.T01:CDS 40.0%
CTGTTCAAGTAAAAGTGGGA+TGG + Chr2:57497959-57497978 MsG0280009748.01.T01:CDS 40.0%
GAAATGCAAGGTTTATGGCA+AGG - Chr2:57497996-57498015 None:intergenic 40.0%
GAGAAGTGAGAACACTGTAA+TGG - Chr2:57497812-57497831 None:intergenic 40.0%
GAGACAGTGTTCCATTTGAT+TGG + Chr2:57500057-57500076 MsG0280009748.01.T01:intron 40.0%
GAGGAAAAGGGGTTTCAAAA+GGG - Chr2:57494772-57494791 None:intergenic 40.0%
GCTATTTGACAACACTGATC+AGG - Chr2:57499835-57499854 None:intergenic 40.0%
GGATTACTACTCATAGTTGG+AGG + Chr2:57496576-57496595 MsG0280009748.01.T01:CDS 40.0%
GGGTTGTTCAATCAAGTTTG+GGG + Chr2:57495511-57495530 MsG0280009748.01.T01:CDS 40.0%
GGTCATTGGATTTATGGTGA+TGG + Chr2:57495378-57495397 MsG0280009748.01.T01:five_prime_UTR 40.0%
GTAACTCAAGTAGATTCCCA+TGG + Chr2:57500236-57500255 MsG0280009748.01.T01:CDS 40.0%
GTCTTGCTGAAAAGCTCAAT+AGG + Chr2:57500423-57500442 MsG0280009748.01.T01:exon 40.0%
GTGCGGTAATTCACATGTTT+GGG + Chr2:57499375-57499394 MsG0280009748.01.T01:CDS 40.0%
GTGGTGAATTATAAGAGCCA+AGG + Chr2:57500590-57500609 MsG0280009748.01.T01:three_prime_UTR 40.0%
GTTCTGTCTAAAAACTGCAG+AGG + Chr2:57498860-57498879 MsG0280009748.01.T01:intron 40.0%
GTTGGATTACCTATGAGATC+GGG + Chr2:57496772-57496791 MsG0280009748.01.T01:intron 40.0%
TAGCATCACAAAAGGGTCAT+TGG + Chr2:57495364-57495383 MsG0280009748.01.T01:five_prime_UTR 40.0%
TAGCGGCTATATAAACGCTA+TGG + Chr2:57499941-57499960 MsG0280009748.01.T01:intron 40.0%
TAGGGTCGTTGAAAAAGTAG+AGG + Chr2:57494991-57495010 MsG0280009748.01.T01:five_prime_UTR 40.0%
TAGGTAATCCAACACGGTTT+AGG - Chr2:57496765-57496784 None:intergenic 40.0%
TATGCCAACTTTCTGATCAC+AGG + Chr2:57496555-57496574 MsG0280009748.01.T01:CDS 40.0%
TCTGACTTCGATGTATTGCT+TGG + Chr2:57495777-57495796 MsG0280009748.01.T01:CDS 40.0%
TGAGGAAAAGGGGTTTCAAA+AGG - Chr2:57494773-57494792 None:intergenic 40.0%
TGGAGCAGAAATGAAGAATG+AGG - Chr2:57494791-57494810 None:intergenic 40.0%
TGGGAATCTACTTGAGTTAC+AGG - Chr2:57500236-57500255 None:intergenic 40.0%
TGTTCAATCAAGTTTGGGGA+TGG + Chr2:57495515-57495534 MsG0280009748.01.T01:CDS 40.0%
TGTTGTCAATCTCAGATCGT+GGG - Chr2:57500006-57500025 None:intergenic 40.0%
TGTTTGTCAATCACGAATGC+AGG + Chr2:57497871-57497890 MsG0280009748.01.T01:intron 40.0%
TTACTCCATCCAATCCCTTT+GGG - Chr2:57500476-57500495 None:intergenic 40.0%
TTCATTGCCTACATCCCAAA+GGG + Chr2:57500459-57500478 MsG0280009748.01.T01:three_prime_UTR 40.0%
TTTACTCCATCCAATCCCTT+TGG - Chr2:57500477-57500496 None:intergenic 40.0%
TTTCAGAACTGAGCATGAGT+CGG + Chr2:57500722-57500741 MsG0280009748.01.T01:three_prime_UTR 40.0%
TTTCATTGCCTACATCCCAA+AGG + Chr2:57500458-57500477 MsG0280009748.01.T01:three_prime_UTR 40.0%
! CAGGAGTATAACCCAAGTAT+TGG - Chr2:57496491-57496510 None:intergenic 40.0%
! GGTTTACGTGCTTGTTAGTA+TGG + Chr2:57495798-57495817 MsG0280009748.01.T01:CDS 40.0%
! GTTTTGTAAAGAGAGGAGTG+AGG - Chr2:57494629-57494648 None:intergenic 40.0%
! TAACTAGCTGACTTAATGGG+TGG + Chr2:57498525-57498544 MsG0280009748.01.T01:intron 40.0%
! TTTACATCTTCTCTGGAAGC+AGG + Chr2:57499524-57499543 MsG0280009748.01.T01:intron 40.0%
!! AATGTTTCAGGTTACTGCTG+GGG + Chr2:57496458-57496477 MsG0280009748.01.T01:intron 40.0%
!! ATCAGAATGGGCTATATGTC+AGG + Chr2:57499761-57499780 MsG0280009748.01.T01:CDS 40.0%
!! GAATGTTTCAGGTTACTGCT+GGG + Chr2:57496457-57496476 MsG0280009748.01.T01:intron 40.0%
!! GTGCCTCACAATTTTGATAG+TGG - Chr2:57496710-57496729 None:intergenic 40.0%
!! TCATGGTGATGGAGGATATA+GGG + Chr2:57495491-57495510 MsG0280009748.01.T01:exon 40.0%
!! TGAATGTTTCAGGTTACTGC+TGG + Chr2:57496456-57496475 MsG0280009748.01.T01:intron 40.0%
!!! AGGGATCTTTGGTTTTTGAC+AGG + Chr2:57499598-57499617 MsG0280009748.01.T01:CDS 40.0%
!!! CGATGCAGCAGTTTTGAAAA+AGG + Chr2:57498350-57498369 MsG0280009748.01.T01:CDS 40.0%
!!! GTGGATTTTAAGGCTCTAGA+TGG + Chr2:57497073-57497092 MsG0280009748.01.T01:intron 40.0%
!!! TGAGCACCATTTTGAGTTTG+TGG + Chr2:57497054-57497073 MsG0280009748.01.T01:intron 40.0%
AAGCAAAGGATGGAGATGGA+TGG + Chr2:57499565-57499584 MsG0280009748.01.T01:CDS 45.0%
AAGCTAAGCCTCTTTGGTTG+GGG - Chr2:57497522-57497541 None:intergenic 45.0%
ACCGAGCTTCCATGTAAACA+TGG + Chr2:57500189-57500208 MsG0280009748.01.T01:CDS 45.0%
AGAAGCTAAGCCTCTTTGGT+TGG - Chr2:57497524-57497543 None:intergenic 45.0%
AGCAAAGGATGGAGATGGAT+GGG + Chr2:57499566-57499585 MsG0280009748.01.T01:CDS 45.0%
AGGTTGTCAGGTACAGAAAG+TGG - Chr2:57500124-57500143 None:intergenic 45.0%
AGTGGAATCTGTAGAGGTCA+TGG + Chr2:57495474-57495493 MsG0280009748.01.T01:exon 45.0%
ATAGCAGTGCTACAACGTAG+CGG + Chr2:57499859-57499878 MsG0280009748.01.T01:intron 45.0%
ATCAAGTTTGGGGATGGCTT+CGG + Chr2:57495521-57495540 MsG0280009748.01.T01:CDS 45.0%
ATCGTTCCGAAGAATCCAGA+CGG + Chr2:57499338-57499357 MsG0280009748.01.T01:CDS 45.0%
ATCTGTAGAGGTCATGGTGA+TGG + Chr2:57495480-57495499 MsG0280009748.01.T01:exon 45.0%
ATGTTTGGGTATGCACCAAC+AGG + Chr2:57499389-57499408 MsG0280009748.01.T01:CDS 45.0%
ATTTGACCTGTGGCTTCAAC+AGG + Chr2:57500300-57500319 MsG0280009748.01.T01:CDS 45.0%
CAAGTAAAAGTGGGATGGCT+TGG + Chr2:57497964-57497983 MsG0280009748.01.T01:CDS 45.0%
CACGACGTGATGTAAGTGTA+TGG - Chr2:57496935-57496954 None:intergenic 45.0%
CATCAAGCAAAGGATGGAGA+TGG + Chr2:57499561-57499580 MsG0280009748.01.T01:CDS 45.0%
CCAAGCCAACCATGTTTACA+TGG - Chr2:57500201-57500220 None:intergenic 45.0%
CTAAACGGGTAAAAGGGTCA+AGG + Chr2:57494946-57494965 MsG0280009748.01.T01:five_prime_UTR 45.0%
CTGTATCCGTCTGGATTCTT+CGG - Chr2:57499347-57499366 None:intergenic 45.0%
GAAGCAATCGGAGACAGTTA+TGG + Chr2:57498089-57498108 MsG0280009748.01.T01:CDS 45.0%
GAAGCTAAGCCTCTTTGGTT+GGG - Chr2:57497523-57497542 None:intergenic 45.0%
GACGCTGCCCTTCAAAATTT+AGG + Chr2:57496129-57496148 MsG0280009748.01.T01:intron 45.0%
GAGAGAGAGAGAGATTGATG+TGG - Chr2:57494577-57494596 None:intergenic 45.0%
GCTTTCCTCCTCATTATCCT+AGG + Chr2:57497337-57497356 MsG0280009748.01.T01:intron 45.0%
GGTAATCCAACACGGTTTAG+GGG - Chr2:57496763-57496782 None:intergenic 45.0%
GTGTTGTCAATCTCAGATCG+TGG - Chr2:57500007-57500026 None:intergenic 45.0%
TACACTTACATCACGTCGTG+TGG + Chr2:57496935-57496954 MsG0280009748.01.T01:intron 45.0%
TACATCCCAAAGGGATTGGA+TGG + Chr2:57500468-57500487 MsG0280009748.01.T01:three_prime_UTR 45.0%
TACCTGATGTGAACTGCTGT+GGG - Chr2:57499089-57499108 None:intergenic 45.0%
TCACAGAGTCAGAAAGAACC+TGG - Chr2:57499000-57499019 None:intergenic 45.0%
TCAGATTCAACTGGTGGGAT+AGG - Chr2:57498144-57498163 None:intergenic 45.0%
TCCTACCTAGGATAATGAGG+AGG - Chr2:57497345-57497364 None:intergenic 45.0%
TCCTCCTCATTATCCTAGGT+AGG + Chr2:57497341-57497360 MsG0280009748.01.T01:intron 45.0%
TCCTGAAGAGCAGAAGCAAT+CGG + Chr2:57498077-57498096 MsG0280009748.01.T01:CDS 45.0%
TCTCAGATCGTGGGAAATAG+CGG - Chr2:57499997-57500016 None:intergenic 45.0%
TGACAACACTGGACCTGATT+TGG + Chr2:57500018-57500037 MsG0280009748.01.T01:intron 45.0%
TGACCTTCTTTCCCTTTGCT+TGG + Chr2:57497013-57497032 MsG0280009748.01.T01:intron 45.0%
TGTTTAAGCTCAGCTTGCCA+AGG - Chr2:57496859-57496878 None:intergenic 45.0%
TGTTTACATGGAAGCTCGGT+CGG - Chr2:57500189-57500208 None:intergenic 45.0%
TTACCTGATGTGAACTGCTG+TGG - Chr2:57499090-57499109 None:intergenic 45.0%
TTGGAAGGACTCTGCTGTAA+GGG + Chr2:57495687-57495706 MsG0280009748.01.T01:CDS 45.0%
TTTAGCGCAACATTGCAAGG+TGG - Chr2:57498478-57498497 None:intergenic 45.0%
TTTGGAAGGACTCTGCTGTA+AGG + Chr2:57495686-57495705 MsG0280009748.01.T01:CDS 45.0%
TTTGGACGCCGAAATGATGA+TGG + Chr2:57500261-57500280 MsG0280009748.01.T01:CDS 45.0%
TTTGTGGCGGCTAAATCCAA+GGG - Chr2:57498325-57498344 None:intergenic 45.0%
! ACTCCTGGGCTTTTTATCGT+AGG + Chr2:57496504-57496523 MsG0280009748.01.T01:CDS 45.0%
! CCATGTAAACATGGTTGGCT+TGG + Chr2:57500198-57500217 MsG0280009748.01.T01:CDS 45.0%
! CGATCTGAGATTGACAACAC+TGG + Chr2:57500007-57500026 MsG0280009748.01.T01:intron 45.0%
! CTCCTGGGCTTTTTATCGTA+GGG + Chr2:57496505-57496524 MsG0280009748.01.T01:CDS 45.0%
! CTTCAACAGGCTTTAGCATC+TGG + Chr2:57500313-57500332 MsG0280009748.01.T01:CDS 45.0%
! CTTGACCCTTTTACCCGTTT+AGG - Chr2:57494948-57494967 None:intergenic 45.0%
! GCACGCTTGGTGGTATTAAT+TGG + Chr2:57497916-57497935 MsG0280009748.01.T01:CDS 45.0%
! TTTTGTGGCGGCTAAATCCA+AGG - Chr2:57498326-57498345 None:intergenic 45.0%
! TTTTTGCCCCTAAACCGTGT+TGG + Chr2:57496754-57496773 MsG0280009748.01.T01:intron 45.0%
!! ATCCAATCCCTTTGGGATGT+AGG - Chr2:57500469-57500488 None:intergenic 45.0%
!! CTGCATCGATCTTTTTGTGG+CGG - Chr2:57498338-57498357 None:intergenic 45.0%
!! CTGCTGCATCGATCTTTTTG+TGG - Chr2:57498341-57498360 None:intergenic 45.0%
!! GATGAGTCATGAGAGCATTG+TGG + Chr2:57500571-57500590 MsG0280009748.01.T01:three_prime_UTR 45.0%
!! GATGATGGATGAAGACGAAG+AGG + Chr2:57500276-57500295 MsG0280009748.01.T01:CDS 45.0%
!! GTCATGGTGATGGAGGATAT+AGG + Chr2:57495490-57495509 MsG0280009748.01.T01:exon 45.0%
ACAACTGATGTGGTGACAGC+AGG - Chr2:57498201-57498220 None:intergenic 50.0%
AGCCCTACGATAAAAAGCCC+AGG - Chr2:57496510-57496529 None:intergenic 50.0%
AGCTAAGCCTCTTTGGTTGG+GGG - Chr2:57497521-57497540 None:intergenic 50.0%
ATACGACGGCACCAAGCAAA+GGG - Chr2:57497027-57497046 None:intergenic 50.0%
ATCCCACAGCAGTTCACATC+AGG + Chr2:57499084-57499103 MsG0280009748.01.T01:CDS 50.0%
ATGCAGGGGTTGCTCGAAAT+TGG + Chr2:57495636-57495655 MsG0280009748.01.T01:CDS 50.0%
ATTTCGGCGTCCAAATCCCA+TGG - Chr2:57500256-57500275 None:intergenic 50.0%
CAAAGGGAAAGAAGGTCACG+CGG - Chr2:57497011-57497030 None:intergenic 50.0%
CACCAAGCGTGCACGATTTA+GGG - Chr2:57497908-57497927 None:intergenic 50.0%
CCTCAAAACGCAGGAAGAGT+TGG + Chr2:57500350-57500369 MsG0280009748.01.T01:CDS 50.0%
CGGATACAGTGCACAAAGTG+CGG + Chr2:57499358-57499377 MsG0280009748.01.T01:CDS 50.0%
CTAAAGCCTGTTGAAGCCAC+AGG - Chr2:57500309-57500328 None:intergenic 50.0%
CTATGAGATCGGGAGCTGTT+GGG + Chr2:57496782-57496801 MsG0280009748.01.T01:intron 50.0%
CTATTTCCCCCCAACCAAAG+AGG + Chr2:57497511-57497530 MsG0280009748.01.T01:intron 50.0%
CTTTGTGCACTGTATCCGTC+TGG - Chr2:57499356-57499375 None:intergenic 50.0%
GACCTGACACCATCTTGCTT+TGG - Chr2:57499422-57499441 None:intergenic 50.0%
GCACCAAGCAAAGGGAAAGA+AGG - Chr2:57497019-57497038 None:intergenic 50.0%
GGGGTTGCTGTCCAATACTT+GGG + Chr2:57496477-57496496 MsG0280009748.01.T01:CDS 50.0%
GGTCACGAAAAGATGCCTGT+TGG + Chr2:57495542-57495561 MsG0280009748.01.T01:CDS 50.0%
GTGAACTGCTGTGGGATTTC+TGG - Chr2:57499081-57499100 None:intergenic 50.0%
GTGCTCATCAGGTGATACGA+CGG - Chr2:57497041-57497060 None:intergenic 50.0%
TCCAGGATCATTCGATGCGA+TGG - Chr2:57496832-57496851 None:intergenic 50.0%
TCCGATTGCTTCTGCTCTTC+AGG - Chr2:57498081-57498100 None:intergenic 50.0%
TCCTACTCGAGACTGTAGCA+CGG - Chr2:57497394-57497413 None:intergenic 50.0%
TGCAGGGGTTGCTCGAAATT+GGG + Chr2:57495637-57495656 MsG0280009748.01.T01:CDS 50.0%
TGCCTACATCCCAAAGGGAT+TGG + Chr2:57500464-57500483 MsG0280009748.01.T01:three_prime_UTR 50.0%
TGGAAGGACTCTGCTGTAAG+GGG + Chr2:57495688-57495707 MsG0280009748.01.T01:CDS 50.0%
TGGGGTTGCTGTCCAATACT+TGG + Chr2:57496476-57496495 MsG0280009748.01.T01:CDS 50.0%
TTCTTCATCGTCACACCTCG+TGG + Chr2:57496961-57496980 MsG0280009748.01.T01:intron 50.0%
TTTCGGCGTCCAAATCCCAT+GGG - Chr2:57500255-57500274 None:intergenic 50.0%
TTTGCGAGTCCTCAAAACGC+AGG + Chr2:57500341-57500360 MsG0280009748.01.T01:CDS 50.0%
! CCAACTCTTCCTGCGTTTTG+AGG - Chr2:57500353-57500372 None:intergenic 50.0%
! CCGCACAAACAAAAGCACGT+GGG - Chr2:57499722-57499741 None:intergenic 50.0%
! TCATGCAGGGAATGGCTTGT+AGG + Chr2:57500152-57500171 MsG0280009748.01.T01:intron 50.0%
! TCCGCACAAACAAAAGCACG+TGG - Chr2:57499723-57499742 None:intergenic 50.0%
!! ACGAAGAGGCATTTGACCTG+TGG + Chr2:57500290-57500309 MsG0280009748.01.T01:CDS 50.0%
!! CCCACGTGCTTTTGTTTGTG+CGG + Chr2:57499719-57499738 MsG0280009748.01.T01:CDS 50.0%
!! TATTGAACGGCATTGGCCGA+TGG + Chr2:57495612-57495631 MsG0280009748.01.T01:CDS 50.0%
!! TGTAGAGGTCATGGTGATGG+AGG + Chr2:57495483-57495502 MsG0280009748.01.T01:exon 50.0%
ACTGATGTGGTGACAGCAGG+TGG - Chr2:57498198-57498217 None:intergenic 55.0%
CATTGGCCGATGGTATGCAG+GGG + Chr2:57495622-57495641 MsG0280009748.01.T01:CDS 55.0%
CCAACAGCTCCCGATCTCAT+AGG - Chr2:57496784-57496803 None:intergenic 55.0%
CCACCAAGCGTGCACGATTT+AGG - Chr2:57497909-57497928 None:intergenic 55.0%
CCTAAATCGTGCACGCTTGG+TGG + Chr2:57497906-57497925 MsG0280009748.01.T01:CDS 55.0%
CCTATGAGATCGGGAGCTGT+TGG + Chr2:57496781-57496800 MsG0280009748.01.T01:intron 55.0%
CTCCCTAAATCGTGCACGCT+TGG + Chr2:57497903-57497922 MsG0280009748.01.T01:CDS 55.0%
GAATGATCCTGGACGAGCCT+TGG + Chr2:57496839-57496858 MsG0280009748.01.T01:intron 55.0%
GAGCAACCCCTGCATACCAT+CGG - Chr2:57495631-57495650 None:intergenic 55.0%
GATACGACGGCACCAAGCAA+AGG - Chr2:57497028-57497047 None:intergenic 55.0%
GCAGGGGTTGCTCGAAATTG+GGG + Chr2:57495638-57495657 MsG0280009748.01.T01:CDS 55.0%
GCCATCGCATCGAATGATCC+TGG + Chr2:57496828-57496847 MsG0280009748.01.T01:intron 55.0%
GCTAAGCCTCTTTGGTTGGG+GGG - Chr2:57497520-57497539 None:intergenic 55.0%
GGAAGGACTCTGCTGTAAGG+GGG + Chr2:57495689-57495708 MsG0280009748.01.T01:CDS 55.0%
GGAGCAAGGCCAAAGCAAGA+TGG + Chr2:57499410-57499429 MsG0280009748.01.T01:CDS 55.0%
GGCCAAAGCAAGATGGTGTC+AGG + Chr2:57499417-57499436 MsG0280009748.01.T01:CDS 55.0%
GGTATGCACCAACAGGAGCA+AGG + Chr2:57499396-57499415 MsG0280009748.01.T01:CDS 55.0%
GGTGACAGCAGGTGGTTTAC+TGG - Chr2:57498190-57498209 None:intergenic 55.0%
TACATGGAAGCTCGGTCGGT+GGG - Chr2:57500185-57500204 None:intergenic 55.0%
TCCGTGCTACAGTCTCGAGT+AGG + Chr2:57497390-57497409 MsG0280009748.01.T01:intron 55.0%
TTACATGGAAGCTCGGTCGG+TGG - Chr2:57500186-57500205 None:intergenic 55.0%
! AAACACCCCCCTTTTCCCTG+TGG + Chr2:57496874-57496893 MsG0280009748.01.T01:intron 55.0%
! CTGGCACACGCTTTTAGCCA+TGG - Chr2:57499062-57499081 None:intergenic 55.0%
! GCATTGGCCGATGGTATGCA+GGG + Chr2:57495621-57495640 MsG0280009748.01.T01:CDS 55.0%
!! TATGGTGCTGTAGCGCGTAG+TGG + Chr2:57499959-57499978 MsG0280009748.01.T01:intron 55.0%
!! TGCTTTGGCCTTGCTCCTGT+TGG - Chr2:57499407-57499426 None:intergenic 55.0%
AAGCTCGGTCGGTGGGTGTT+AGG - Chr2:57500178-57500197 None:intergenic 60.0%
AGAGTCTGCGCACAGAGGCA+GGG - Chr2:57496911-57496930 None:intergenic 60.0%
ATGGCAGAGTCTGCGCACAG+AGG - Chr2:57496916-57496935 None:intergenic 60.0%
CACAGTTCGAGCACGCCAAC+AGG - Chr2:57495560-57495579 None:intergenic 60.0%
CTGTTGGCGTGCTCGAACTG+TGG + Chr2:57495558-57495577 MsG0280009748.01.T01:CDS 60.0%
!! GGCATTGGCCGATGGTATGC+AGG + Chr2:57495620-57495639 MsG0280009748.01.T01:CDS 60.0%
!! TGGGGGTGCCACAGGGAAAA+GGG - Chr2:57496885-57496904 None:intergenic 60.0%
CACCTCGTGGCCAATCCCTC+CGG + Chr2:57496974-57496993 MsG0280009748.01.T01:intron 65.0%
CAGAGTCTGCGCACAGAGGC+AGG - Chr2:57496912-57496931 None:intergenic 65.0%
CAGCTTGCCAAGGCTCGTCC+AGG - Chr2:57496849-57496868 None:intergenic 65.0%
CTAGAGTCCGCCGGAGGGAT+TGG - Chr2:57496987-57497006 None:intergenic 65.0%
GAGTCTGCGCACAGAGGCAG+GGG - Chr2:57496910-57496929 None:intergenic 65.0%
! CAATCCCTCCGGCGGACTCT+AGG + Chr2:57496985-57497004 MsG0280009748.01.T01:intron 65.0%
! CTTTTCCCTGTGGCACCCCC+AGG + Chr2:57496884-57496903 MsG0280009748.01.T01:intron 65.0%
! GGGGTGCCACAGGGAAAAGG+GGG - Chr2:57496883-57496902 None:intergenic 65.0%
! GGGTGCCACAGGGAAAAGGG+GGG - Chr2:57496882-57496901 None:intergenic 65.0%
!! CTGGGGGTGCCACAGGGAAA+AGG - Chr2:57496886-57496905 None:intergenic 65.0%
!! GGGGGTGCCACAGGGAAAAG+GGG - Chr2:57496884-57496903 None:intergenic 65.0%
CTCGTGGCCAATCCCTCCGG+CGG + Chr2:57496977-57496996 MsG0280009748.01.T01:intron 70.0%
TCACGCGGCCTAGAGTCCGC+CGG - Chr2:57496996-57497015 None:intergenic 70.0%
CGCACAGAGGCAGGGGCCTG+GGG - Chr2:57496903-57496922 None:intergenic 75.0%
GCACAGAGGCAGGGGCCTGG+GGG - Chr2:57496902-57496921 None:intergenic 75.0%
GCGCACAGAGGCAGGGGCCT+GGG - Chr2:57496904-57496923 None:intergenic 75.0%
GCGGCCTAGAGTCCGCCGGA+GGG - Chr2:57496992-57497011 None:intergenic 75.0%
TGCGCACAGAGGCAGGGGCC+TGG - Chr2:57496905-57496924 None:intergenic 75.0%
!! AGGGGCCTGGGGGTGCCACA+GGG - Chr2:57496892-57496911 None:intergenic 75.0%
!! CGCCGGAGGGATTGGCCACG+AGG - Chr2:57496979-57496998 None:intergenic 75.0%
! CGCGGCCTAGAGTCCGCCGG+AGG - Chr2:57496993-57497012 None:intergenic 80.0%
!!! CAGGGGCCTGGGGGTGCCAC+AGG - Chr2:57496893-57496912 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
Chr2 gene 57494551 57500885 57494551 ID=MsG0280009748.01;Name=MsG0280009748.01
Chr2 mRNA 57494551 57500885 57494551 ID=MsG0280009748.01.T01;Parent=MsG0280009748.01;Name=MsG0280009748.01.T01;_AED=0.26;_eAED=0.26;_QI=942|1|1|1|0.62|0.77|9|453|559
Chr2 exon 57494551 57495819 57494551 ID=MsG0280009748.01.T01:exon:18701;Parent=MsG0280009748.01.T01
Chr2 exon 57497893 57498386 57497893 ID=MsG0280009748.01.T01:exon:18703;Parent=MsG0280009748.01.T01
Chr2 exon 57498774 57498854 57498774 ID=MsG0280009748.01.T01:exon:18704;Parent=MsG0280009748.01.T01
Chr2 exon 57499001 57499105 57499001 ID=MsG0280009748.01.T01:exon:18705;Parent=MsG0280009748.01.T01
Chr2 exon 57499325 57499438 57499325 ID=MsG0280009748.01.T01:exon:18706;Parent=MsG0280009748.01.T01
Chr2 exon 57499546 57499629 57499546 ID=MsG0280009748.01.T01:exon:18707;Parent=MsG0280009748.01.T01
Chr2 exon 57499711 57499782 57499711 ID=MsG0280009748.01.T01:exon:18708;Parent=MsG0280009748.01.T01
Chr2 exon 57500160 57500885 57500160 ID=MsG0280009748.01.T01:exon:18709;Parent=MsG0280009748.01.T01
Chr2 five_prime_UTR 57494551 57495492 57494551 ID=MsG0280009748.01.T01:five_prime_utr;Parent=MsG0280009748.01.T01
Chr2 CDS 57495493 57495819 57495493 ID=MsG0280009748.01.T01:cds;Parent=MsG0280009748.01.T01
Chr2 CDS 57496468 57496597 57496468 ID=MsG0280009748.01.T01:cds;Parent=MsG0280009748.01.T01
Chr2 CDS 57497893 57498386 57497893 ID=MsG0280009748.01.T01:cds;Parent=MsG0280009748.01.T01
Chr2 CDS 57498774 57498854 57498774 ID=MsG0280009748.01.T01:cds;Parent=MsG0280009748.01.T01
Chr2 CDS 57499001 57499105 57499001 ID=MsG0280009748.01.T01:cds;Parent=MsG0280009748.01.T01
Chr2 CDS 57499325 57499438 57499325 ID=MsG0280009748.01.T01:cds;Parent=MsG0280009748.01.T01
Chr2 CDS 57499546 57499629 57499546 ID=MsG0280009748.01.T01:cds;Parent=MsG0280009748.01.T01
Chr2 CDS 57499711 57499782 57499711 ID=MsG0280009748.01.T01:cds;Parent=MsG0280009748.01.T01
Chr2 CDS 57500160 57500432 57500160 ID=MsG0280009748.01.T01:cds;Parent=MsG0280009748.01.T01
Chr2 three_prime_UTR 57500433 57500885 57500433 ID=MsG0280009748.01.T01:three_prime_utr;Parent=MsG0280009748.01.T01
Chr2 mRNA 57495493 57498506 57495493 ID=MsG0280009748.01.T02;Parent=MsG0280009748.01;Name=MsG0280009748.01.T02;_AED=0.43;_eAED=0.43;_QI=0|0.5|0.33|1|1|1|3|0|294
Chr2 exon 57495493 57495633 57495493 ID=MsG0280009748.01.T02:exon:18710;Parent=MsG0280009748.01.T02
Chr2 exon 57497893 57498506 57497893 ID=MsG0280009748.01.T02:exon:18711;Parent=MsG0280009748.01.T02
Chr2 CDS 57495493 57495633 57495493 ID=MsG0280009748.01.T02:cds;Parent=MsG0280009748.01.T02
Chr2 CDS 57496468 57496597 57496468 ID=MsG0280009748.01.T02:cds;Parent=MsG0280009748.01.T02
Chr2 CDS 57497893 57498506 57497893 ID=MsG0280009748.01.T02:cds;Parent=MsG0280009748.01.T02
Gene Sequence

>MsG0280009748.01.T01

ATGGTGATGGAGGATATAGGGTTGTTCAATCAAGTTTGGGGATGGCTTCGGTCACGAAAAGATGCCTGTTGGCGTGCTCGAACTGTGGTGTTTTGTTGTAGAGACAAAACTGCGATGTTTATTGAACGGCATTGGCCGATGGTATGCAGGGGTTGCTCGAAATTGGGGAGCTTACTTACATTATCGTTGATTTTTTGGAAGGACTCTGCTGTAAGGGGGTTTCAGTCTTTCATTAAGTTTGGTTCAGTGATGCTCTTGCTTATAATGTGGAGCTGCTTTCTTAGTCTGACTTCGATGTATTGCTTGGTTTACGTGCTTGTTAGTATGGTTACTGCTGGGGTTGCTGTCCAATACTTGGGTTATACTCCTGGGCTTTTTATCGTAGGGCTTTTTGCTATCCTTATTTTGTGGATGTATGCCAACTTTCTGATCACAGGATTACTACTCATAGTTGGAGGTTGCTTGTTCTCCCTAAATCGTGCACGCTTGGTGGTATTAATTGGAACCGCATATGCTATGTATTCTGTTCAAGTAAAAGTGGGATGGCTTGGCGTTTTCCTTGCCATAAACCTTGCATTTCTTTCAAATGACATTTTGAATTTTCTGCTTCAATGGTTTGATAATGTGAGTGAAAGTTCACATCCTGAAGAGCAGAAGCAATCGGAGACAGTTATGGAAGACGACTTCGCTGAAGAGTGTGAATATCCTATCCCACCAGTTGAATCTGAGAATTTGCATTCATGCAAATCATCCAGTAAACCACCTGCTGTCACCACATCAGTTGTTGATAAGCAGAAAGAAATTTTGGTTACCAAAGTTGTAAAAGAGCAGACAAATTCAATTGATGAAATGAGAAGGATATTGAAGAGTCTTAATCATTATGATGCCCTTGGATTTAGCCGCCACAAAAAGATCGATGCAGCAGTTTTGAAAAAGGAATACCGGAAAAAGGCTATGCTCGTGCATCCTGATAAAAATATGGGCAGTTCTATGTCAAGCGAGTCATTCAAGAAACTTCAATGTGCATATGAGGTTCTTTCTGACTCTGTGAAGAAGCGAGACTATGATGAACAATTAAGAAAAGAAGAATCCATGGCTAAAAGCGTGTGCCAGAAATCCCACAGCAGTTCACATCAGGATAATACTGAATATCGTTCCGAAGAATCCAGACGGATACAGTGCACAAAGTGCGGTAATTCACATGTTTGGGTATGCACCAACAGGAGCAAGGCCAAAGCAAGATGGTGTCAGGATTGCTGTCAGTTTCATCAAGCAAAGGATGGAGATGGATGGGTTGAATATAAGGGATCTTTGGTTTTTGACAGGACTCAAAAAGTCGAGATCCCACGTGCTTTTGTTTGTGCGGAGAGCAAAATATTTGATGTATCAGAATGGGCTATATGTCAGGGAATGGCTTGTAGGCCTAACACCCACCGACCGAGCTTCCATGTAAACATGGTTGGCTTGGAGAAAAGCCATTCCTGTAACTCAAGTAGATTCCCATGGGATTTGGACGCCGAAATGATGATGGATGAAGACGAAGAGGCATTTGACCTGTGGCTTCAACAGGCTTTAGCATCTGGTCTCTTTTGCGAGTCCTCAAAACGCAGGAAGAGTTGGAGTCCATTCAAATTGCCTCAAAAGAAAGGGAAAAAGCAATGGCGAAGAACGTCTTGCTGA

>MsG0280009748.01.T02

ATGGTGATGGAGGATATAGGGTTGTTCAATCAAGTTTGGGGATGGCTTCGGTCACGAAAAGATGCCTGTTGGCGTGCTCGAACTGTGGTGTTTTGTTGTAGAGACAAAACTGCGATGTTTATTGAACGGCATTGGCCGATGGTTACTGCTGGGGTTGCTGTCCAATACTTGGGTTATACTCCTGGGCTTTTTATCGTAGGGCTTTTTGCTATCCTTATTTTGTGGATGTATGCCAACTTTCTGATCACAGGATTACTACTCATAGTTGGAGGTTGCTTGTTCTCCCTAAATCGTGCACGCTTGGTGGTATTAATTGGAACCGCATATGCTATGTATTCTGTTCAAGTAAAAGTGGGATGGCTTGGCGTTTTCCTTGCCATAAACCTTGCATTTCTTTCAAATGACATTTTGAATTTTCTGCTTCAATGGTTTGATAATGTGAGTGAAAGTTCACATCCTGAAGAGCAGAAGCAATCGGAGACAGTTATGGAAGACGACTTCGCTGAAGAGTGTGAATATCCTATCCCACCAGTTGAATCTGAGAATTTGCATTCATGCAAATCATCCAGTAAACCACCTGCTGTCACCACATCAGTTGTTGATAAGCAGAAAGAAATTTTGGTTACCAAAGTTGTAAAAGAGCAGACAAATTCAATTGATGAAATGAGAAGGATATTGAAGAGTCTTAATCATTATGATGCCCTTGGATTTAGCCGCCACAAAAAGATCGATGCAGCAGTTTTGAAAAAGGAATACCGGAAAAAGGTATTCATCGTTATCAAAATAGCTTCATCGTTATCAAAATATGTATTCAGTTTCACGCTGTTGCAAATTTGTTTAAGCATCATTAGTACCACCTTGCAATGTTGCGCTAAATATTTTTGA

Protein sequence

>MsG0280009748.01.T01

MVMEDIGLFNQVWGWLRSRKDACWRARTVVFCCRDKTAMFIERHWPMVCRGCSKLGSLLTLSLIFWKDSAVRGFQSFIKFGSVMLLLIMWSCFLSLTSMYCLVYVLVSMVTAGVAVQYLGYTPGLFIVGLFAILILWMYANFLITGLLLIVGGCLFSLNRARLVVLIGTAYAMYSVQVKVGWLGVFLAINLAFLSNDILNFLLQWFDNVSESSHPEEQKQSETVMEDDFAEECEYPIPPVESENLHSCKSSSKPPAVTTSVVDKQKEILVTKVVKEQTNSIDEMRRILKSLNHYDALGFSRHKKIDAAVLKKEYRKKAMLVHPDKNMGSSMSSESFKKLQCAYEVLSDSVKKRDYDEQLRKEESMAKSVCQKSHSSSHQDNTEYRSEESRRIQCTKCGNSHVWVCTNRSKAKARWCQDCCQFHQAKDGDGWVEYKGSLVFDRTQKVEIPRAFVCAESKIFDVSEWAICQGMACRPNTHRPSFHVNMVGLEKSHSCNSSRFPWDLDAEMMMDEDEEAFDLWLQQALASGLFCESSKRRKSWSPFKLPQKKGKKQWRRTSC*

>MsG0280009748.01.T02

MVMEDIGLFNQVWGWLRSRKDACWRARTVVFCCRDKTAMFIERHWPMVTAGVAVQYLGYTPGLFIVGLFAILILWMYANFLITGLLLIVGGCLFSLNRARLVVLIGTAYAMYSVQVKVGWLGVFLAINLAFLSNDILNFLLQWFDNVSESSHPEEQKQSETVMEDDFAEECEYPIPPVESENLHSCKSSSKPPAVTTSVVDKQKEILVTKVVKEQTNSIDEMRRILKSLNHYDALGFSRHKKIDAAVLKKEYRKKVFIVIKIASSLSKYVFSFTLLQICLSIISTTLQCCAKYF*