Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880044237.01.T01 | XP_039685589.1 | 94.203 | 69 | 3 | 1 | 1 | 69 | 243 | 310 | 5.60E-37 | 135 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880044237.01.T01 | F4IDI6 | 56.061 | 66 | 22 | 1 | 3 | 68 | 298 | 356 | 3.82E-17 | 76.3 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880044237.01.T01 | A0A396GPW6 | 94.203 | 69 | 3 | 1 | 1 | 69 | 243 | 310 | 2.67e-37 | 135 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047814.01 | MsG0880044237.01 | 0.840992 | 6.224854e-58 | 9.020142e-55 |
| MsG0080047825.01 | MsG0880044237.01 | 0.805840 | 1.099344e-49 | 5.876643e-47 |
| MsG0080047869.01 | MsG0880044237.01 | 0.819692 | 1.016075e-52 | 7.874588e-50 |
| MsG0080047944.01 | MsG0880044237.01 | 0.802709 | 4.933608e-49 | 2.433491e-46 |
| MsG0080047959.01 | MsG0880044237.01 | 0.804946 | 1.692248e-49 | 8.840971e-47 |
| MsG0080048058.01 | MsG0880044237.01 | 0.813174 | 2.925839e-51 | 1.896865e-48 |
| MsG0080048461.01 | MsG0880044237.01 | 0.859775 | 3.275511e-63 | 8.751769e-60 |
| MsG0080048462.01 | MsG0880044237.01 | 0.851630 | 7.832256e-61 | 1.595075e-57 |
| MsG0080048764.01 | MsG0880044237.01 | 0.825937 | 3.568842e-54 | 3.299759e-51 |
| MsG0080048856.01 | MsG0880044237.01 | 0.839593 | 1.444228e-57 | 2.003877e-54 |
| MsG0080048874.01 | MsG0880044237.01 | 0.813598 | 2.360690e-51 | 1.548366e-48 |
| MsG0080048928.01 | MsG0880044237.01 | 0.807118 | 5.909128e-50 | 3.263886e-47 |
| MsG0080048964.01 | MsG0880044237.01 | 0.814758 | 1.308782e-51 | 8.857771e-49 |
| MsG0180000001.01 | MsG0880044237.01 | 0.843159 | 1.662899e-58 | 2.578665e-55 |
| MsG0180000065.01 | MsG0880044237.01 | 0.845994 | 2.868713e-59 | 4.867847e-56 |
| MsG0180000123.01 | MsG0880044237.01 | 0.845419 | 4.108534e-59 | 6.842717e-56 |
| MsG0180000142.01 | MsG0880044237.01 | 0.812700 | 3.716462e-51 | 2.379359e-48 |
| MsG0180000145.01 | MsG0880044237.01 | 0.823329 | 1.468443e-53 | 1.260437e-50 |
| MsG0180000154.01 | MsG0880044237.01 | 0.812144 | 4.914041e-51 | 3.099821e-48 |
| MsG0180000178.01 | MsG0880044237.01 | 0.805986 | 1.024272e-49 | 5.495984e-47 |
| MsG0180000195.01 | MsG0880044237.01 | 0.861298 | 1.131770e-63 | 3.187620e-60 |
| MsG0180000197.01 | MsG0880044237.01 | 0.839208 | 1.817558e-57 | 2.492394e-54 |
| MsG0180000235.01 | MsG0880044237.01 | 0.833085 | 6.529810e-56 | 7.441424e-53 |
| MsG0180000332.01 | MsG0880044237.01 | 0.814636 | 1.392783e-51 | 9.395717e-49 |
| MsG0180000334.01 | MsG0880044237.01 | 0.835720 | 1.424010e-56 | 1.756159e-53 |
| MsG0180000335.01 | MsG0880044237.01 | 0.853120 | 2.948457e-61 | 6.302484e-58 |
| MsG0180000402.01 | MsG0880044237.01 | 0.837410 | 5.283933e-57 | 6.857353e-54 |
| MsG0180000470.01 | MsG0880044237.01 | 0.845229 | 4.627350e-59 | 7.659606e-56 |
| MsG0180000550.01 | MsG0880044237.01 | 0.804194 | 2.428055e-49 | 1.244068e-46 |
| MsG0180000555.01 | MsG0880044237.01 | 0.847874 | 8.775641e-60 | 1.581583e-56 |
| MsG0180000585.01 | MsG0880044237.01 | 0.838400 | 2.941422e-57 | 3.935144e-54 |
| MsG0180000702.01 | MsG0880044237.01 | 0.823116 | 1.646919e-53 | 1.405294e-50 |
| MsG0180000732.01 | MsG0880044237.01 | 0.837439 | 5.193625e-57 | 6.746811e-54 |
| MsG0180000741.01 | MsG0880044237.01 | 0.837326 | 5.551784e-57 | 7.186826e-54 |
| MsG0180000797.01 | MsG0880044237.01 | 0.831978 | 1.228228e-55 | 1.354443e-52 |
| MsG0180000821.01 | MsG0880044237.01 | 0.829185 | 5.929130e-55 | 6.023938e-52 |
| MsG0180000822.01 | MsG0880044237.01 | 0.852459 | 4.554385e-61 | 9.522480e-58 |
| MsG0180000836.01 | MsG0880044237.01 | 0.808287 | 3.335721e-50 | 1.899801e-47 |
| MsG0180001006.01 | MsG0880044237.01 | 0.800737 | 1.252624e-48 | 5.876922e-46 |
| MsG0180001009.01 | MsG0880044237.01 | 0.816035 | 6.805160e-52 | 4.769349e-49 |
| MsG0180001023.01 | MsG0880044237.01 | 0.842260 | 2.881884e-58 | 4.345255e-55 |
| MsG0180001117.01 | MsG0880044237.01 | 0.834523 | 2.852855e-56 | 3.394467e-53 |
| MsG0180001141.01 | MsG0880044237.01 | 0.807817 | 4.200175e-50 | 2.362576e-47 |
| MsG0180001173.01 | MsG0880044237.01 | 0.839873 | 1.221417e-57 | 1.709438e-54 |
| MsG0180001178.01 | MsG0880044237.01 | 0.805212 | 1.488454e-49 | 7.829115e-47 |
| MsG0180001294.01 | MsG0880044237.01 | 0.839822 | 1.259219e-57 | 1.759638e-54 |
| MsG0180001312.01 | MsG0880044237.01 | 0.803118 | 4.060411e-49 | 2.023681e-46 |
| MsG0180001565.01 | MsG0880044237.01 | 0.857109 | 2.040988e-62 | 4.981867e-59 |
| MsG0180001566.01 | MsG0880044237.01 | 0.846835 | 1.691582e-59 | 2.949168e-56 |
| MsG0180001570.01 | MsG0880044237.01 | 0.808791 | 2.603157e-50 | 1.502169e-47 |
| MsG0180001662.01 | MsG0880044237.01 | 0.801024 | 1.094282e-48 | 5.171994e-46 |
| MsG0180001687.01 | MsG0880044237.01 | 0.819079 | 1.401790e-52 | 1.068019e-49 |
| MsG0180001884.01 | MsG0880044237.01 | 0.805400 | 1.359563e-49 | 7.185766e-47 |
| MsG0180001911.01 | MsG0880044237.01 | 0.810834 | 9.462793e-51 | 5.764893e-48 |
| MsG0180002071.01 | MsG0880044237.01 | 0.834351 | 3.152589e-56 | 3.731467e-53 |
| MsG0180002075.01 | MsG0880044237.01 | 0.835333 | 1.783494e-56 | 2.174316e-53 |
| MsG0180002273.01 | MsG0880044237.01 | 0.837917 | 3.916236e-57 | 5.162623e-54 |
| MsG0880043992.01 | MsG0880044237.01 | 0.831266 | 1.839756e-55 | 1.986197e-52 |
| MsG0880043994.01 | MsG0880044237.01 | 0.820731 | 5.873415e-53 | 4.685116e-50 |
| MsG0880044075.01 | MsG0880044237.01 | 0.827582 | 1.444728e-54 | 1.400467e-51 |
| MsG0880044237.01 | MsG0880044415.01 | 0.855688 | 5.334884e-62 | 1.241983e-58 |
| MsG0880044237.01 | MsG0880044477.01 | 0.818709 | 1.701300e-52 | 1.283024e-49 |
| MsG0880044237.01 | MsG0880044486.01 | 0.803503 | 3.379428e-49 | 1.701143e-46 |
| MsG0880044237.01 | MsG0880044510.01 | 0.854196 | 1.445787e-61 | 3.203835e-58 |
| MsG0880044237.01 | MsG0880044542.01 | 0.826154 | 3.169885e-54 | 2.948805e-51 |
| MsG0880044237.01 | MsG0880044554.01 | 0.813480 | 2.505717e-51 | 1.638276e-48 |
| MsG0880044237.01 | MsG0880044565.01 | 0.814565 | 1.444221e-51 | 9.724221e-49 |
| MsG0880044237.01 | MsG0880044574.01 | 0.849986 | 2.273948e-60 | 4.388611e-57 |
| MsG0880044237.01 | MsG0880044782.01 | 0.822691 | 2.068923e-53 | 1.744213e-50 |
| MsG0880044237.01 | MsG0880044917.01 | 0.820910 | 5.342772e-53 | 4.283454e-50 |
| MsG0880044237.01 | MsG0880045106.01 | 0.819864 | 9.282397e-53 | 7.228590e-50 |
| MsG0880044237.01 | MsG0880045111.01 | 0.803711 | 3.059264e-49 | 1.548131e-46 |
| MsG0880044237.01 | MsG0880045372.01 | 0.828923 | 6.864576e-55 | 6.919627e-52 |
| MsG0880044237.01 | MsG0880045393.01 | 0.846198 | 2.525634e-59 | 4.313084e-56 |
| MsG0880044237.01 | MsG0880045415.01 | 0.801807 | 7.564770e-49 | 3.646482e-46 |
| MsG0880044237.01 | MsG0880045429.01 | 0.816176 | 6.328962e-52 | 4.452617e-49 |
| MsG0880044237.01 | MsG0880045583.01 | 0.810860 | 9.341740e-51 | 5.695157e-48 |
| MsG0880044237.01 | MsG0880045639.01 | 0.826688 | 2.365318e-54 | 2.234055e-51 |
| MsG0880044237.01 | MsG0880045653.01 | 0.832521 | 9.016089e-56 | 1.010206e-52 |
| MsG0880044237.01 | MsG0880045687.01 | 0.810057 | 1.392874e-50 | 8.312703e-48 |
| MsG0880044237.01 | MsG0880045736.01 | 0.828715 | 7.704207e-55 | 7.719306e-52 |
| MsG0880044237.01 | MsG0880045895.01 | 0.812047 | 5.158836e-51 | 3.245415e-48 |
| MsG0880044237.01 | MsG0880045897.01 | -0.800827 | 1.200495e-48 | 5.645212e-46 |
| MsG0880044237.01 | MsG0880045914.01 | 0.810397 | 1.176212e-50 | 7.082037e-48 |
| MsG0880044237.01 | MsG0880045937.01 | 0.829995 | 3.767431e-55 | 3.918915e-52 |
| MsG0880044237.01 | MsG0880046012.01 | 0.842466 | 2.542355e-58 | 3.858417e-55 |
| MsG0880044237.01 | MsG0880046020.01 | 0.834503 | 2.886600e-56 | 3.432493e-53 |
| MsG0880044237.01 | MsG0880046027.01 | 0.849046 | 4.156363e-60 | 7.780534e-57 |
| MsG0880044237.01 | MsG0880046047.01 | 0.800206 | 1.606895e-48 | 7.438126e-46 |
| MsG0880044237.01 | MsG0880046091.01 | 0.804672 | 1.930555e-49 | 1.001420e-46 |
| MsG0880044237.01 | MsG0880046113.01 | 0.809311 | 2.014746e-50 | 1.178924e-47 |
| MsG0880044237.01 | MsG0880046425.01 | 0.810756 | 9.841548e-51 | 5.983117e-48 |
| MsG0880044237.01 | MsG0880046479.01 | 0.877302 | 7.008947e-69 | 3.507143e-65 |
| MsG0880044237.01 | MsG0880046669.01 | 0.843401 | 1.433417e-58 | 2.240366e-55 |
| MsG0880044237.01 | MsG0880046733.01 | 0.805150 | 1.534006e-49 | 8.055984e-47 |
| MsG0880044237.01 | MsG0880046762.01 | 0.875960 | 2.040146e-68 | 9.716532e-65 |
| MsG0880044237.01 | MsG0880046933.01 | 0.822609 | 2.161644e-53 | 1.818364e-50 |
| MsG0880044237.01 | MsG0880046973.01 | 0.838567 | 2.662959e-57 | 3.580845e-54 |
| MsG0880044237.01 | MsG0880047016.01 | 0.837297 | 5.649482e-57 | 7.306230e-54 |
| MsG0880044237.01 | MsG0880047120.01 | 0.831366 | 1.739052e-55 | 1.883121e-52 |
| MsG0880044237.01 | MsG0880047143.01 | 0.812665 | 3.781817e-51 | 2.418945e-48 |
| MsG0880044237.01 | MsG0880047191.01 | 0.836695 | 8.047439e-57 | 1.022031e-53 |
| MsG0880044237.01 | MsG0880047192.01 | 0.827771 | 1.301354e-54 | 1.268509e-51 |
| MsG0880044237.01 | MsG0880047391.01 | 0.800711 | 1.268126e-48 | 5.945452e-46 |
| MsG0880044237.01 | MsG0880047437.01 | 0.829534 | 4.879073e-55 | 5.007409e-52 |
| MsG0880044237.01 | MsG0880047472.01 | 0.815614 | 8.448959e-52 | 5.853804e-49 |
| MsG0880044237.01 | MsG0880047473.01 | 0.802681 | 4.998590e-49 | 2.463738e-46 |
| MsG0880044237.01 | MsG0880047497.01 | 0.814683 | 1.360058e-51 | 9.186336e-49 |
| MsG0880044237.01 | MsG0880047590.01 | 0.826965 | 2.031057e-54 | 1.933952e-51 |
| MsG0180002870.01 | MsG0880044237.01 | 0.822796 | 1.955365e-53 | 1.653374e-50 |
| MsG0180002894.01 | MsG0880044237.01 | 0.817306 | 3.531997e-52 | 2.562780e-49 |
| MsG0180002895.01 | MsG0880044237.01 | 0.811642 | 6.321860e-51 | 3.934088e-48 |
| MsG0180002912.01 | MsG0880044237.01 | 0.805396 | 1.361900e-49 | 7.197415e-47 |
| MsG0180002952.01 | MsG0880044237.01 | 0.854534 | 1.154649e-61 | 2.587004e-58 |
| MsG0180003031.01 | MsG0880044237.01 | 0.836439 | 9.349854e-57 | 1.178356e-53 |
| MsG0180003097.01 | MsG0880044237.01 | 0.802988 | 4.318859e-49 | 2.145368e-46 |
| MsG0180003257.01 | MsG0880044237.01 | 0.810940 | 8.977068e-51 | 5.484753e-48 |
| MsG0180003281.01 | MsG0880044237.01 | 0.808428 | 3.112191e-50 | 1.779065e-47 |
| MsG0180003303.01 | MsG0880044237.01 | 0.809108 | 2.227376e-50 | 1.296311e-47 |
| MsG0180003337.01 | MsG0880044237.01 | 0.801753 | 7.758010e-49 | 3.734461e-46 |
| MsG0180003444.01 | MsG0880044237.01 | 0.858498 | 7.904394e-63 | 2.021315e-59 |
| MsG0180003669.01 | MsG0880044237.01 | 0.862842 | 3.804685e-64 | 1.130086e-60 |
| MsG0180003673.01 | MsG0880044237.01 | 0.802048 | 6.748345e-49 | 3.273011e-46 |
| MsG0180003864.01 | MsG0880044237.01 | 0.812010 | 5.257514e-51 | 3.304263e-48 |
| MsG0180003977.01 | MsG0880044237.01 | 0.806843 | 6.754321e-50 | 3.704537e-47 |
| MsG0180004060.01 | MsG0880044237.01 | 0.827223 | 1.761719e-54 | 1.690133e-51 |
| MsG0180004091.01 | MsG0880044237.01 | 0.839500 | 1.526924e-57 | 2.112690e-54 |
| MsG0180004147.01 | MsG0880044237.01 | 0.808059 | 3.729318e-50 | 2.111143e-47 |
| MsG0180004157.01 | MsG0880044237.01 | 0.800108 | 1.682233e-48 | 7.767514e-46 |
| MsG0180004162.01 | MsG0880044237.01 | 0.800686 | 1.282754e-48 | 6.010477e-46 |
| MsG0180004180.01 | MsG0880044237.01 | 0.806960 | 6.380645e-50 | 3.510028e-47 |
| MsG0180004264.01 | MsG0880044237.01 | 0.832527 | 8.986323e-56 | 1.007064e-52 |
| MsG0180004295.01 | MsG0880044237.01 | 0.817173 | 3.782674e-52 | 2.734810e-49 |
| MsG0180004320.01 | MsG0880044237.01 | 0.841091 | 5.862764e-58 | 8.520955e-55 |
| MsG0180004331.01 | MsG0880044237.01 | 0.803386 | 3.573299e-49 | 1.793229e-46 |
| MsG0180004357.01 | MsG0880044237.01 | 0.820728 | 5.883837e-53 | 4.693033e-50 |
| MsG0180004372.01 | MsG0880044237.01 | 0.817515 | 3.168196e-52 | 2.312209e-49 |
| MsG0180004388.01 | MsG0880044237.01 | 0.859258 | 4.684508e-63 | 1.229427e-59 |
| MsG0180004389.01 | MsG0880044237.01 | 0.816383 | 5.688011e-52 | 4.024402e-49 |
| MsG0180004598.01 | MsG0880044237.01 | 0.811191 | 7.919012e-51 | 4.870098e-48 |
| MsG0180004689.01 | MsG0880044237.01 | 0.834797 | 2.434314e-56 | 2.919815e-53 |
| MsG0180004730.01 | MsG0880044237.01 | 0.822824 | 1.926689e-53 | 1.630499e-50 |
| MsG0180004802.01 | MsG0880044237.01 | 0.811849 | 5.698209e-51 | 3.565711e-48 |
| MsG0180004943.01 | MsG0880044237.01 | 0.820227 | 7.668418e-53 | 6.032116e-50 |
| MsG0180004991.01 | MsG0880044237.01 | 0.817175 | 3.779714e-52 | 2.732779e-49 |
| MsG0180005050.01 | MsG0880044237.01 | 0.851459 | 8.753576e-61 | 1.772896e-57 |
| MsG0180005125.01 | MsG0880044237.01 | 0.832762 | 7.854562e-56 | 8.864431e-53 |
| MsG0180005185.01 | MsG0880044237.01 | 0.806967 | 6.360932e-50 | 3.499750e-47 |
| MsG0180005233.01 | MsG0880044237.01 | 0.841790 | 3.837713e-58 | 5.700950e-55 |
| MsG0180005250.01 | MsG0880044237.01 | 0.830819 | 2.369646e-55 | 2.524748e-52 |
| MsG0180005371.01 | MsG0880044237.01 | 0.834970 | 2.201838e-56 | 2.655145e-53 |
| MsG0180005419.01 | MsG0880044237.01 | 0.801473 | 8.858037e-49 | 4.234006e-46 |
| MsG0180005443.01 | MsG0880044237.01 | 0.827284 | 1.703637e-54 | 1.637394e-51 |
| MsG0180005445.01 | MsG0880044237.01 | 0.853890 | 1.771735e-61 | 3.886279e-58 |
| MsG0180005451.01 | MsG0880044237.01 | 0.809960 | 1.461185e-50 | 8.698615e-48 |
| MsG0180005493.01 | MsG0880044237.01 | 0.809840 | 1.551260e-50 | 9.205573e-48 |
| MsG0180005575.01 | MsG0880044237.01 | 0.807864 | 4.104532e-50 | 2.311567e-47 |
| MsG0180005664.01 | MsG0880044237.01 | 0.835434 | 1.681536e-56 | 2.056056e-53 |
| MsG0180005708.01 | MsG0880044237.01 | 0.802711 | 4.926954e-49 | 2.430389e-46 |
| MsG0180005765.01 | MsG0880044237.01 | 0.820067 | 8.344327e-53 | 6.535394e-50 |
| MsG0180005842.01 | MsG0880044237.01 | 0.834085 | 3.674908e-56 | 4.314986e-53 |
| MsG0180005860.01 | MsG0880044237.01 | 0.842662 | 2.255669e-58 | 3.443793e-55 |
| MsG0180005944.01 | MsG0880044237.01 | 0.834105 | 3.632066e-56 | 4.267409e-53 |
| MsG0180005993.01 | MsG0880044237.01 | 0.818716 | 1.695364e-52 | 1.278788e-49 |
| MsG0180006013.01 | MsG0880044237.01 | 0.807454 | 5.016290e-50 | 2.795212e-47 |
| MsG0180006016.01 | MsG0880044237.01 | 0.818274 | 2.135480e-52 | 1.591163e-49 |
| MsG0180006023.01 | MsG0880044237.01 | 0.857921 | 1.173602e-62 | 2.944151e-59 |
| MsG0180006207.01 | MsG0880044237.01 | 0.815048 | 1.128818e-51 | 7.699788e-49 |
| MsG0180006235.01 | MsG0880044237.01 | 0.853953 | 1.698735e-61 | 3.734058e-58 |
| MsG0180006260.01 | MsG0880044237.01 | 0.805631 | 1.216119e-49 | 6.465969e-47 |
| MsG0280006375.01 | MsG0880044237.01 | 0.823346 | 1.455452e-53 | 1.249845e-50 |
| MsG0780040261.01 | MsG0880044237.01 | 0.816483 | 5.404050e-52 | 3.833746e-49 |
| MsG0780040262.01 | MsG0880044237.01 | 0.819895 | 9.133425e-53 | 7.118826e-50 |
| MsG0780040445.01 | MsG0880044237.01 | 0.815219 | 1.034000e-51 | 7.085797e-49 |
| MsG0780040488.01 | MsG0880044237.01 | 0.875628 | 2.651642e-68 | 1.247023e-64 |
| MsG0780040669.01 | MsG0880044237.01 | 0.811814 | 5.799607e-51 | 3.625821e-48 |
| MsG0780040704.01 | MsG0880044237.01 | 0.834666 | 2.627308e-56 | 3.138901e-53 |
| MsG0780040712.01 | MsG0880044237.01 | 0.809981 | 1.446539e-50 | 8.615930e-48 |
| MsG0780040726.01 | MsG0880044237.01 | 0.831983 | 1.225335e-55 | 1.351414e-52 |
| MsG0780040841.01 | MsG0880044237.01 | 0.802447 | 5.585756e-49 | 2.736833e-46 |
| MsG0780040861.01 | MsG0880044237.01 | 0.844837 | 5.903750e-59 | 9.651764e-56 |
| MsG0780040926.01 | MsG0880044237.01 | 0.816533 | 5.266653e-52 | 3.741452e-49 |
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| MsG0280008615.01 | MsG0880044237.01 | 0.860152 | 2.521352e-63 | 6.825352e-60 |
| MsG0280008696.01 | MsG0880044237.01 | 0.815665 | 8.228231e-52 | 5.708484e-49 |
| MsG0280008885.01 | MsG0880044237.01 | 0.851515 | 8.440502e-61 | 1.712621e-57 |
| MsG0280008907.01 | MsG0880044237.01 | 0.821210 | 4.557248e-53 | 3.684401e-50 |
| MsG0280008970.01 | MsG0880044237.01 | 0.833706 | 4.570609e-56 | 5.305747e-53 |
| MsG0280008971.01 | MsG0880044237.01 | 0.840292 | 9.494619e-58 | 1.346267e-54 |
| MsG0280009024.01 | MsG0880044237.01 | 0.826360 | 2.831693e-54 | 2.649762e-51 |
| MsG0280009140.01 | MsG0880044237.01 | 0.807658 | 4.539580e-50 | 2.542910e-47 |
| MsG0280009514.01 | MsG0880044237.01 | 0.875049 | 4.184574e-68 | 1.926985e-64 |
| MsG0280009739.01 | MsG0880044237.01 | 0.806436 | 8.235517e-50 | 4.469726e-47 |
| MsG0280009748.01 | MsG0880044237.01 | 0.860773 | 1.635326e-63 | 4.522006e-60 |
| MsG0280009813.01 | MsG0880044237.01 | 0.804425 | 2.173184e-49 | 1.120095e-46 |
| MsG0280009868.01 | MsG0880044237.01 | 0.813279 | 2.773300e-51 | 1.803268e-48 |
| MsG0280009996.01 | MsG0880044237.01 | 0.827429 | 1.572603e-54 | 1.517830e-51 |
| MsG0280010233.01 | MsG0880044237.01 | 0.817180 | 3.769781e-52 | 2.725954e-49 |
| MsG0280010389.01 | MsG0880044237.01 | 0.871593 | 6.072530e-67 | 2.463596e-63 |
| MsG0280010443.01 | MsG0880044237.01 | 0.847219 | 1.328355e-59 | 2.344360e-56 |
| MsG0280010447.01 | MsG0880044237.01 | 0.822324 | 2.517192e-53 | 2.100116e-50 |
| MsG0280010459.01 | MsG0880044237.01 | 0.833023 | 6.766899e-56 | 7.697161e-53 |
| MsG0280010491.01 | MsG0880044237.01 | 0.852885 | 3.440668e-61 | 7.296067e-58 |
| MsG0680035663.01 | MsG0880044237.01 | 0.826071 | 3.317837e-54 | 3.079090e-51 |
| MsG0680035692.01 | MsG0880044237.01 | 0.842036 | 3.303793e-58 | 4.945893e-55 |
| MsG0780036018.01 | MsG0880044237.01 | 0.803625 | 3.188206e-49 | 1.609859e-46 |
| MsG0780036477.01 | MsG0880044237.01 | 0.865992 | 3.948602e-65 | 1.310119e-61 |
| MsG0780036609.01 | MsG0880044237.01 | 0.836563 | 8.698159e-57 | 1.100175e-53 |
| MsG0780036630.01 | MsG0880044237.01 | 0.814869 | 1.236429e-51 | 8.393009e-49 |
| MsG0780036663.01 | MsG0880044237.01 | 0.823777 | 1.154042e-53 | 1.003348e-50 |
| MsG0780036719.01 | MsG0880044237.01 | 0.857673 | 1.390298e-62 | 3.458778e-59 |
| MsG0780036773.01 | MsG0880044237.01 | 0.830853 | 2.324538e-55 | 2.479151e-52 |
| MsG0780036950.01 | MsG0880044237.01 | 0.813803 | 2.127549e-51 | 1.403203e-48 |
| MsG0780037146.01 | MsG0880044237.01 | 0.803865 | 2.842438e-49 | 1.444234e-46 |
| MsG0780037287.01 | MsG0880044237.01 | 0.827235 | 1.750077e-54 | 1.679587e-51 |
| MsG0780037604.01 | MsG0880044237.01 | 0.818020 | 2.437682e-52 | 1.803741e-49 |
| MsG0780037975.01 | MsG0880044237.01 | 0.829475 | 5.041306e-55 | 5.165098e-52 |
| MsG0780038323.01 | MsG0880044237.01 | 0.804828 | 1.791070e-49 | 9.328731e-47 |
| MsG0780038386.01 | MsG0880044237.01 | 0.844130 | 9.144685e-59 | 1.462214e-55 |
| MsG0780038391.01 | MsG0880044237.01 | 0.828729 | 7.644483e-55 | 7.662263e-52 |
| MsG0780038401.01 | MsG0880044237.01 | 0.837998 | 3.732164e-57 | 4.932595e-54 |
| MsG0780038443.01 | MsG0880044237.01 | 0.827419 | 1.581216e-54 | 1.525774e-51 |
| MsG0780038495.01 | MsG0880044237.01 | 0.840843 | 6.809822e-58 | 9.823194e-55 |
| MsG0780038602.01 | MsG0880044237.01 | 0.853139 | 2.911332e-61 | 6.226946e-58 |
| MsG0780038603.01 | MsG0880044237.01 | 0.830058 | 3.635395e-55 | 3.788195e-52 |
| MsG0780038837.01 | MsG0880044237.01 | 0.821440 | 4.032975e-53 | 3.281184e-50 |
| MsG0780038937.01 | MsG0880044237.01 | 0.853767 | 1.922677e-61 | 4.199780e-58 |
| MsG0780039059.01 | MsG0880044237.01 | 0.822910 | 1.839144e-53 | 1.560225e-50 |
| MsG0780039137.01 | MsG0880044237.01 | 0.843825 | 1.103863e-58 | 1.748245e-55 |
| MsG0780039243.01 | MsG0880044237.01 | 0.836822 | 7.470546e-57 | 9.523857e-54 |
| MsG0780039252.01 | MsG0880044237.01 | 0.842756 | 2.129611e-58 | 3.260797e-55 |
| MsG0780039443.01 | MsG0880044237.01 | 0.827454 | 1.550615e-54 | 1.497741e-51 |
| MsG0780039452.01 | MsG0880044237.01 | 0.800396 | 1.469814e-48 | 6.836613e-46 |
| MsG0780039570.01 | MsG0880044237.01 | 0.809766 | 1.608924e-50 | 9.529604e-48 |
| MsG0780039622.01 | MsG0880044237.01 | -0.802002 | 6.896046e-49 | 3.340700e-46 |
| MsG0780039655.01 | MsG0880044237.01 | 0.822932 | 1.818242e-53 | 1.543432e-50 |
| MsG0780039712.01 | MsG0880044237.01 | 0.809165 | 2.165429e-50 | 1.262172e-47 |
| MsG0780039777.01 | MsG0880044237.01 | 0.807965 | 3.905263e-50 | 2.205241e-47 |
| MsG0780039845.01 | MsG0880044237.01 | 0.810087 | 1.371963e-50 | 8.193963e-48 |
| MsG0780039858.01 | MsG0880044237.01 | 0.811978 | 5.341981e-51 | 3.354438e-48 |
| MsG0780039952.01 | MsG0880044237.01 | 0.829460 | 5.083754e-55 | 5.206470e-52 |
| MsG0780040044.01 | MsG0880044237.01 | 0.860567 | 1.888121e-63 | 5.184196e-60 |
| MsG0780040057.01 | MsG0880044237.01 | 0.829196 | 5.893986e-55 | 5.990175e-52 |
| MsG0780040176.01 | MsG0880044237.01 | 0.801737 | 7.818805e-49 | 3.762122e-46 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880044237.01.T01 | MTR_2g069350 | 53.333 | 60 | 28 | 0 | 9 | 68 | 306 | 365 | 9.75e-18 | 75.1 |
| MsG0880044237.01.T01 | MTR_2g028830 | 59.184 | 49 | 20 | 0 | 20 | 68 | 270 | 318 | 1.45e-15 | 68.9 |
| MsG0880044237.01.T01 | MTR_4g083540 | 55.102 | 49 | 22 | 0 | 20 | 68 | 244 | 292 | 5.46e-15 | 67.0 |
| MsG0880044237.01.T01 | MTR_5g013690 | 46.809 | 47 | 25 | 0 | 22 | 68 | 225 | 271 | 7.94e-11 | 55.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880044237.01.T01 | AT1G79110 | 56.061 | 66 | 22 | 1 | 3 | 68 | 273 | 331 | 3.74e-18 | 76.3 |
| MsG0880044237.01.T01 | AT1G79110 | 56.061 | 66 | 22 | 1 | 3 | 68 | 295 | 353 | 3.87e-18 | 76.3 |
| MsG0880044237.01.T01 | AT1G79110 | 56.061 | 66 | 22 | 1 | 3 | 68 | 298 | 356 | 3.90e-18 | 76.3 |
| MsG0880044237.01.T01 | AT3G12920 | 62.500 | 48 | 18 | 0 | 21 | 68 | 286 | 333 | 6.15e-17 | 72.8 |
| MsG0880044237.01.T01 | AT4G19700 | 55.102 | 49 | 20 | 1 | 22 | 68 | 254 | 302 | 2.72e-14 | 65.5 |
| MsG0880044237.01.T01 | AT5G45100 | 53.061 | 49 | 21 | 1 | 22 | 68 | 217 | 265 | 3.44e-13 | 62.0 |
| MsG0880044237.01.T01 | AT5G45100 | 53.061 | 49 | 21 | 1 | 22 | 68 | 244 | 292 | 3.78e-13 | 62.4 |
Find 14 sgRNAs with CRISPR-Local
Find 12 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTGTTCAATGTGTGGGGCTA+TGG | 0.402214 | 8:+38219688 | MsG0880044237.01.T01:CDS |
| AGTAATGACGGCGCAGGATA+AGG | 0.404721 | 8:+38219559 | None:intergenic |
| TATGTTTGTGTTCAATGTGT+GGG | 0.464104 | 8:+38219681 | MsG0880044237.01.T01:CDS |
| CACAAACATAAGTGTCTACA+AGG | 0.505076 | 8:-38219668 | None:intergenic |
| GATTTAACAGAATCACATAT+AGG | 0.518774 | 8:-38219722 | None:intergenic |
| AAGGATGAAGGTACTAGTAG+TGG | 0.520250 | 8:+38219578 | MsG0880044237.01.T01:CDS |
| ATAGATTATGCAGAAACTGT+GGG | 0.549558 | 8:+38219618 | MsG0880044237.01.T01:CDS |
| TTATGTTTGTGTTCAATGTG+TGG | 0.554213 | 8:+38219680 | MsG0880044237.01.T01:CDS |
| AATAGATTATGCAGAAACTG+TGG | 0.580193 | 8:+38219617 | MsG0880044237.01.T01:CDS |
| TTATGCAGAAACTGTGGGGA+AGG | 0.589265 | 8:+38219623 | MsG0880044237.01.T01:CDS |
| ATGTTTGTGTTCAATGTGTG+GGG | 0.595264 | 8:+38219682 | MsG0880044237.01.T01:CDS |
| ACGGCGCAGGATAAGGATGA+AGG | 0.596413 | 8:+38219566 | MsG0880044237.01.T01:CDS |
| TACGGTAGTAATGACGGCGC+AGG | 0.633033 | 8:+38219553 | None:intergenic |
| TAGATTATGCAGAAACTGTG+GGG | 0.699966 | 8:+38219619 | MsG0880044237.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | GATTTAACAGAATCACATAT+AGG | - | Chr8:38219725-38219744 | None:intergenic | 25.0% |
| AATAGATTATGCAGAAACTG+TGG | + | Chr8:38219617-38219636 | MsG0880044237.01.T01:CDS | 30.0% | |
| ATAGATTATGCAGAAACTGT+GGG | + | Chr8:38219618-38219637 | MsG0880044237.01.T01:CDS | 30.0% | |
| TATGTTTGTGTTCAATGTGT+GGG | + | Chr8:38219681-38219700 | MsG0880044237.01.T01:CDS | 30.0% | |
| TTATGTTTGTGTTCAATGTG+TGG | + | Chr8:38219680-38219699 | MsG0880044237.01.T01:CDS | 30.0% | |
| ATGTTTGTGTTCAATGTGTG+GGG | + | Chr8:38219682-38219701 | MsG0880044237.01.T01:CDS | 35.0% | |
| CACAAACATAAGTGTCTACA+AGG | - | Chr8:38219671-38219690 | None:intergenic | 35.0% | |
| TAGATTATGCAGAAACTGTG+GGG | + | Chr8:38219619-38219638 | MsG0880044237.01.T01:CDS | 35.0% | |
| !! | AAGGATGAAGGTACTAGTAG+TGG | + | Chr8:38219578-38219597 | MsG0880044237.01.T01:CDS | 40.0% |
| TTATGCAGAAACTGTGGGGA+AGG | + | Chr8:38219623-38219642 | MsG0880044237.01.T01:CDS | 45.0% | |
| GTGTTCAATGTGTGGGGCTA+TGG | + | Chr8:38219688-38219707 | MsG0880044237.01.T01:CDS | 50.0% | |
| ACGGCGCAGGATAAGGATGA+AGG | + | Chr8:38219566-38219585 | MsG0880044237.01.T01:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr8 | gene | 38219563 | 38219772 | 38219563 | ID=MsG0880044237.01;Name=MsG0880044237.01 |
| Chr8 | mRNA | 38219563 | 38219772 | 38219563 | ID=MsG0880044237.01.T01;Parent=MsG0880044237.01;Name=MsG0880044237.01.T01;_AED=0.43;_eAED=0.43;_QI=0|-1|0|1|-1|0|1|0|69 |
| Chr8 | exon | 38219563 | 38219772 | 38219563 | ID=MsG0880044237.01.T01:exon:16198;Parent=MsG0880044237.01.T01 |
| Chr8 | CDS | 38219563 | 38219772 | 38219563 | ID=MsG0880044237.01.T01:cds;Parent=MsG0880044237.01.T01 |
| Gene Sequence |
| Protein sequence |
