AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780036719.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780036719.01.T01 MTR_7g017690 92.185 627 25 2 1 604 1 626 0.0 1105
MsG0780036719.01.T01 MTR_3g086660 48.889 585 226 8 7 525 17 594 7.05e-146 435
MsG0780036719.01.T01 MTR_2g075260 52.703 74 35 0 295 368 2 75 1.19e-13 70.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780036719.01.T01 AT5G11390 37.255 663 335 14 10 593 37 697 1.47e-104 332
MsG0780036719.01.T01 AT1G68910 32.039 618 351 11 24 592 26 623 4.22e-73 246
MsG0780036719.01.T01 AT1G68910 33.511 564 309 10 24 541 26 569 1.71e-71 241
MsG0780036719.01.T01 AT1G68910 33.511 564 309 10 24 541 26 569 1.71e-71 241

Find 124 sgRNAs with CRISPR-Local

Find 352 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TACCAATTGAAGAATGAAAT+TGG 0.147225 7:-12428436 None:intergenic
ACACTTCATGCTGAGATTTC+TGG 0.165736 7:+12429594 MsG0780036719.01.T01:CDS
CAAGCTTTCTCAGTTCAATT+TGG 0.215388 7:+12430649 MsG0780036719.01.T01:CDS
TGAATCTTACATTTGCAATA+TGG 0.264094 7:+12434568 MsG0780036719.01.T01:three_prime_UTR
GGTTCTGAGGTTAGAGATTT+GGG 0.265934 7:+12429558 MsG0780036719.01.T01:CDS
GGGTTCTGAGGTTAGAGATT+TGG 0.291296 7:+12429557 MsG0780036719.01.T01:CDS
AGGAAGAAGCAATCGAAGTT+TGG 0.300071 7:+12430555 MsG0780036719.01.T01:CDS
TGATTTGTTATGTGGGGTGC+TGG 0.301024 7:+12429536 MsG0780036719.01.T01:CDS
ATGACAACTGCAAAGAATAT+TGG 0.308994 7:+12431369 MsG0780036719.01.T01:CDS
ACAGCTGAAGCAGTTAATTT+AGG 0.314252 7:+12430773 MsG0780036719.01.T01:CDS
TGATGAAGAAAACATCGATA+TGG 0.316839 7:+12429488 MsG0780036719.01.T01:CDS
CGCGACCTTTCTGTATTTCA+AGG 0.320361 7:+12434209 MsG0780036719.01.T01:CDS
GCTGTAGAGGATCCCAGGTC+TGG 0.325143 7:+12434412 MsG0780036719.01.T01:three_prime_UTR
TATGATGAATTTGGAAACTT+TGG 0.334665 7:+12429440 MsG0780036719.01.T01:CDS
GAGGATGCTTGAGAAATCTT+TGG 0.339008 7:+12430430 MsG0780036719.01.T01:CDS
GTTGGAGGTGTTTCAGATAA+TGG 0.340110 7:+12429348 MsG0780036719.01.T01:CDS
CTTCATTTGAAATTCCCTTC+AGG 0.351204 7:-12430613 None:intergenic
CAGCAGGCAGTAGCGTCTGC+TGG 0.352082 7:+12431117 MsG0780036719.01.T01:intron
ACCCAATTTCATTCTTCAAT+TGG 0.353122 7:+12428434 MsG0780036719.01.T01:five_prime_UTR
TTTGAGTTTGATTTGTTATG+TGG 0.355398 7:+12429528 MsG0780036719.01.T01:CDS
TTTGCTGACACAGTTGGCTT+TGG 0.366680 7:+12431416 MsG0780036719.01.T01:CDS
AGAGACTACTGTTGGGATCT+AGG 0.370282 7:+12434291 MsG0780036719.01.T01:three_prime_UTR
AACTTTGGAAGGTGAATTAG+AGG 0.372115 7:+12429455 MsG0780036719.01.T01:CDS
AGCAAGCGAGAACAAACTTT+TGG 0.375212 7:+12432439 MsG0780036719.01.T01:CDS
GTGTTACACAATTGAAGATA+TGG 0.376803 7:+12431167 MsG0780036719.01.T01:CDS
TTGAGTTTGATTTGTTATGT+GGG 0.386095 7:+12429529 MsG0780036719.01.T01:CDS
AAGTTTCTTGAGGAGTAGAT+TGG 0.388441 7:+12431305 MsG0780036719.01.T01:CDS
TTTCTTTCAATTCTACGATA+AGG 0.399271 7:-12430925 None:intergenic
GAGATTCTTCTTTGAACGAT+TGG 0.400387 7:+12429628 MsG0780036719.01.T01:CDS
TAGGCAGGGACTTGCGGATT+GGG 0.407479 7:+12434310 MsG0780036719.01.T01:three_prime_UTR
GGAAGAAGCAATCGAAGTTT+GGG 0.409580 7:+12430556 MsG0780036719.01.T01:CDS
CTGTAGAGGATCCCAGGTTC+GGG 0.413179 7:+12434599 MsG0780036719.01.T01:three_prime_UTR
AGATATGGAACATGTGATAA+AGG 0.420057 7:+12431182 MsG0780036719.01.T01:CDS
ACCAATTGAAGAATGAAATT+GGG 0.423735 7:-12428435 None:intergenic
GACCATCTATCTCCCGAACC+TGG 0.427669 7:-12434611 None:intergenic
TCGAAGTTTGATCATCCTCT+TGG 0.428130 7:-12430355 None:intergenic
CTTTCTCAGTTCAATTTGGT+TGG 0.429559 7:+12430653 MsG0780036719.01.T01:CDS
GCTGTAGAGGATCCCAGGTT+CGG 0.433892 7:+12434598 MsG0780036719.01.T01:three_prime_UTR
CTCCTCACAGTCCCAACATC+TGG 0.435438 7:-12434120 None:intergenic
GACTTTGTCTTCTTATAAGA+AGG 0.441599 7:+12429719 MsG0780036719.01.T01:CDS
TCCCAGGTTCGGGAGATAGA+TGG 0.457958 7:+12434609 MsG0780036719.01.T01:three_prime_UTR
GGGAATTTCAAATGAAGTGT+TGG 0.466188 7:+12430619 MsG0780036719.01.T01:CDS
TATTGCAAATGTAAGATTCA+AGG 0.466758 7:-12434565 None:intergenic
TTCCAGCTTATCTCTAAGCT+CGG 0.467512 7:-12430693 None:intergenic
CGTCTAACTGAAAATTGAAT+CGG 0.468948 7:-12428360 None:intergenic
AGACTTTCACATTCACCAAC+TGG 0.472930 7:-12430841 None:intergenic
CTAGGCAGGGACTTGCGGAT+TGG 0.473182 7:+12434309 MsG0780036719.01.T01:three_prime_UTR
ACTGAAGCAAACATATAAGA+AGG 0.478500 7:+12432469 MsG0780036719.01.T01:CDS
ATCCGAGCTTAGAGATAAGC+TGG 0.490624 7:+12430691 MsG0780036719.01.T01:CDS
TACAAGGACAATGACATTGT+AGG 0.493849 7:+12434640 MsG0780036719.01.T01:three_prime_UTR
TTAACTCGTCTTCTAAAGAA+AGG 0.496891 7:-12430523 None:intergenic
CTGTAGAGGATCCCAGGTCT+GGG 0.499023 7:+12434413 MsG0780036719.01.T01:three_prime_UTR
GATTTGTTATGTGGGGTGCT+GGG 0.499035 7:+12429537 MsG0780036719.01.T01:CDS
CAGATTCAATACCAGATGTT+GGG 0.500850 7:+12434109 MsG0780036719.01.T01:CDS
ATGTGGGGTGCTGGGTTCTG+AGG 0.507959 7:+12429545 MsG0780036719.01.T01:CDS
CTGCAGCTGTAGAGGATCCC+AGG 0.510548 7:+12434593 MsG0780036719.01.T01:three_prime_UTR
GAACGATTGGCAAGAGAGGT+TGG 0.512420 7:+12429641 MsG0780036719.01.T01:CDS
ACTACTGTTGGGATCTAGGC+AGG 0.517981 7:+12434295 MsG0780036719.01.T01:three_prime_UTR
GAGAGAGCGTCTTAATAAGA+AGG 0.518789 7:+12431440 MsG0780036719.01.T01:CDS
GAGTAGATTGGAATGCTTGG+AGG 0.519165 7:+12431317 MsG0780036719.01.T01:CDS
TCAGATTCAATACCAGATGT+TGG 0.521726 7:+12434108 MsG0780036719.01.T01:CDS
AAGTTTGTTCTCGCTTGCTA+AGG 0.523128 7:-12432435 None:intergenic
TACAATATATCTCCCAGACC+TGG 0.527080 7:-12434425 None:intergenic
TTTGTTCTCGCTTGCTAAGG+AGG 0.527329 7:-12432432 None:intergenic
GATAAAGGATCTTAAGTCAA+AGG 0.527438 7:+12431197 MsG0780036719.01.T01:CDS
TAAAAGTTTGCTGACACAGT+TGG 0.530211 7:+12431410 MsG0780036719.01.T01:CDS
GAAAGGCAAGAGACTACTGT+TGG 0.530914 7:+12434283 MsG0780036719.01.T01:three_prime_UTR
CTTTGAACGATTGGCAAGAG+AGG 0.530964 7:+12429637 MsG0780036719.01.T01:CDS
GGGATCTAGGCAGGGACTTG+CGG 0.532776 7:+12434304 MsG0780036719.01.T01:three_prime_UTR
CAAAGTGTTGAAGATAATAC+CGG 0.537217 7:+12429315 MsG0780036719.01.T01:CDS
GAGGAGTAGATTGGAATGCT+TGG 0.538497 7:+12431314 MsG0780036719.01.T01:CDS
AGATAATGGAGAAGTTATTG+TGG 0.538820 7:+12429362 MsG0780036719.01.T01:CDS
ACGAGGAAGTAAGTTTCTTG+AGG 0.550455 7:+12431295 MsG0780036719.01.T01:CDS
ATCACCGTACTGCACTCGTA+AGG 0.555245 7:-12434386 None:intergenic
ACAGTGTACTTCAAGTGTTG+TGG 0.556505 7:+12428333 None:intergenic
TGTCATTGTCCTTGTAACCT+AGG 0.557055 7:-12434633 None:intergenic
ACCATCTATCTCCCGAACCT+GGG 0.559019 7:-12434610 None:intergenic
CAAGTCCTTGAAATACAGAA+AGG 0.560321 7:-12434214 None:intergenic
AGTTTGGGAAAGATTGTTTG+AGG 0.560777 7:+12430571 MsG0780036719.01.T01:CDS
GACTTTGTCTTCTGAGCATG+AGG 0.562788 7:+12432514 MsG0780036719.01.T01:CDS
ATGCGGCTGTAGAGGATCCC+AGG 0.565226 7:+12434407 MsG0780036719.01.T01:three_prime_UTR
GTACGGTGATGCGGCTGTAG+AGG 0.567254 7:+12434399 MsG0780036719.01.T01:three_prime_UTR
ATGAATTTGGAAACTTTGGA+AGG 0.568364 7:+12429444 MsG0780036719.01.T01:CDS
ATACTGTTGCTGATATTCAT+CGG 0.568555 7:-12430867 None:intergenic
ATATATTGTACTAGATTACA+AGG 0.569223 7:+12434438 MsG0780036719.01.T01:three_prime_UTR
TTCGGGAGATAGATGGTCCT+AGG 0.572663 7:+12434616 MsG0780036719.01.T01:three_prime_UTR
TGAGTTTGATTTGTTATGTG+GGG 0.573199 7:+12429530 MsG0780036719.01.T01:CDS
TCTTATAAGAAGGAAGAGAA+TGG 0.577851 7:+12429729 MsG0780036719.01.T01:CDS
ACCTCCAACATCAACATCAC+CGG 0.581822 7:-12429334 None:intergenic
ACCGGTGATGTTGATGTTGG+AGG 0.584105 7:+12429333 MsG0780036719.01.T01:CDS
AGTAGATTGGAATGCTTGGA+GGG 0.587529 7:+12431318 MsG0780036719.01.T01:CDS
TGCACTGTCAGCTAGACTCT+CGG 0.590430 7:-12431229 None:intergenic
ATAGATGGTCCTAGGTTACA+AGG 0.591080 7:+12434624 MsG0780036719.01.T01:three_prime_UTR
ATATGGTGCTGCAGCTGTAG+AGG 0.594837 7:+12434585 MsG0780036719.01.T01:three_prime_UTR
AATACCGGTGATGTTGATGT+TGG 0.597119 7:+12429330 MsG0780036719.01.T01:CDS
GAATCCTTACGAGTGCAGTA+CGG 0.598877 7:+12434382 MsG0780036719.01.T01:three_prime_UTR
AGAGAGGTTGGTTGAATCCG+AGG 0.600549 7:+12429653 MsG0780036719.01.T01:CDS
AAAGGCAAGAGACTACTGTT+GGG 0.602120 7:+12434284 MsG0780036719.01.T01:three_prime_UTR
ACTGTGAGGAGAATAGATGC+AGG 0.607917 7:+12434132 MsG0780036719.01.T01:CDS
GGAGGGATCACTGCAGAAAG+CGG 0.612584 7:+12431335 MsG0780036719.01.T01:CDS
CTGAAGCAAACATATAAGAA+GGG 0.621626 7:+12432470 MsG0780036719.01.T01:CDS
GTGTTCTCAAGTTAGAGACA+TGG 0.624574 7:+12430898 MsG0780036719.01.T01:CDS
GAGTCTAGCTGACAGTGCAG+AGG 0.624641 7:+12431233 MsG0780036719.01.T01:CDS
AATCTCGTAAAACTGCTCCT+CGG 0.624682 7:-12429670 None:intergenic
GGGAAATGACATCATACGAA+AGG 0.624990 7:+12434330 MsG0780036719.01.T01:three_prime_UTR
ACAATATATCTCCCAGACCT+GGG 0.627584 7:-12434424 None:intergenic
TTGAAGAAAAGCTAAATCTG+AGG 0.628560 7:+12430498 MsG0780036719.01.T01:CDS
CTTGAAATACAGAAAGGTCG+CGG 0.630513 7:-12434208 None:intergenic
TACCAGATGTTGGGACTGTG+AGG 0.630861 7:+12434118 MsG0780036719.01.T01:CDS
AGACGAGTTAATTCAAACAG+AGG 0.633790 7:+12430535 MsG0780036719.01.T01:CDS
ACAAGAAACTGAATGCCAGT+TGG 0.639494 7:+12430826 MsG0780036719.01.T01:CDS
GTGATGAATATTTCAGACAA+CGG 0.643744 7:-12428392 None:intergenic
CTACTGTTGGGATCTAGGCA+GGG 0.644668 7:+12434296 MsG0780036719.01.T01:three_prime_UTR
ACTTTGGAAGGTGAATTAGA+GGG 0.646483 7:+12429456 MsG0780036719.01.T01:CDS
ACGAGTGCAGTACGGTGATG+CGG 0.647729 7:+12434390 MsG0780036719.01.T01:three_prime_UTR
CAATGCGCGTGAGATCCTGA+AGG 0.651405 7:+12430598 MsG0780036719.01.T01:CDS
TACAAGGACACTGACACTGT+AGG 0.658264 7:+12434454 MsG0780036719.01.T01:three_prime_UTR
AACTAATGAAGAACTCAACA+AGG 0.662178 7:+12431009 MsG0780036719.01.T01:CDS
GGGATCACTGCAGAAAGCGG+AGG 0.666512 7:+12431338 MsG0780036719.01.T01:CDS
ACAACAGGGAATGTTGAAGA+CGG 0.671738 7:+12430323 MsG0780036719.01.T01:intron
AATGCGCGTGAGATCCTGAA+GGG 0.678003 7:+12430599 MsG0780036719.01.T01:CDS
ATCTAATGCTGATTTAAACG+AGG 0.690867 7:+12431278 MsG0780036719.01.T01:CDS
ACAGGGAATGTTGAAGACGG+TGG 0.694865 7:+12430326 MsG0780036719.01.T01:intron
AGACGGTGGAAATGTCCAAG+AGG 0.721239 7:+12430340 MsG0780036719.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACCATTATTATTATTATATA+AGG + Chr7:12431782-12431801 MsG0780036719.01.T01:intron 10.0%
!! ACCTTATATAATAATAATAA+TGG - Chr7:12431786-12431805 None:intergenic 10.0%
!! TTACTAGAAATAAAAATTTA+GGG - Chr7:12430265-12430284 None:intergenic 10.0%
!! TTTACTAGAAATAAAAATTT+AGG - Chr7:12430266-12430285 None:intergenic 10.0%
!!! AGTTAAATTTTTTCTTTTTA+TGG + Chr7:12433146-12433165 MsG0780036719.01.T01:intron 10.0%
!!! ATTTTTTTAAAGTTTTTATC+GGG + Chr7:12428724-12428743 MsG0780036719.01.T01:intron 10.0%
!!! TTGTTTTAAAAATTAAGAAA+AGG + Chr7:12429980-12429999 MsG0780036719.01.T01:intron 10.0%
!! AAAAAATAAAGAACAATATC+AGG - Chr7:12433896-12433915 None:intergenic 15.0%
!! ATTCAAATACTGAAATATAT+AGG - Chr7:12432107-12432126 None:intergenic 15.0%
!!! ATATTTTGAAACAATTGTTA+AGG - Chr7:12433037-12433056 None:intergenic 15.0%
!!! TACTATTTCTATTAAATTGT+TGG + Chr7:12433377-12433396 MsG0780036719.01.T01:intron 15.0%
!! AAATGTATTTGTTTCATCTT+AGG + Chr7:12432614-12432633 MsG0780036719.01.T01:intron 20.0%
!! AATAAATGTAAAACAGTACT+TGG + Chr7:12433286-12433305 MsG0780036719.01.T01:intron 20.0%
!! AATAGCATTAAATACAATGA+AGG - Chr7:12433540-12433559 None:intergenic 20.0%
!! AATGTATTTGTTTCATCTTA+GGG + Chr7:12432615-12432634 MsG0780036719.01.T01:intron 20.0%
!! AGAAAAAATTTAACTAAGCT+AGG - Chr7:12433141-12433160 None:intergenic 20.0%
!! ATAAAAATATTCTCATTGGT+CGG - Chr7:12430042-12430061 None:intergenic 20.0%
!! ATATATTGTACTAGATTACA+AGG + Chr7:12434438-12434457 MsG0780036719.01.T01:three_prime_UTR 20.0%
!! ATATCACATGAAAATTAATG+TGG - Chr7:12429893-12429912 None:intergenic 20.0%
!! ATTAATCAACATAAATAACC+AGG + Chr7:12431573-12431592 MsG0780036719.01.T01:intron 20.0%
!! ATTGTATTGTATTCACTTTA+TGG + Chr7:12428565-12428584 MsG0780036719.01.T01:intron 20.0%
!! TAATTCAAATACACAATCAA+TGG - Chr7:12430240-12430259 None:intergenic 20.0%
!! TCAGATAAAAATATTCTCAT+TGG - Chr7:12430046-12430065 None:intergenic 20.0%
!! TTAATCAACATAAATAACCA+GGG + Chr7:12431574-12431593 MsG0780036719.01.T01:intron 20.0%
!! TTCATTTAGTTGTTAGAAAA+GGG + Chr7:12429852-12429871 MsG0780036719.01.T01:intron 20.0%
!! TTTCATTTAGTTGTTAGAAA+AGG + Chr7:12429851-12429870 MsG0780036719.01.T01:intron 20.0%
!!! AACAATCTTTTAGTTTTGAA+AGG + Chr7:12429697-12429716 MsG0780036719.01.T01:CDS 20.0%
!!! ATTTTTTACGATTAGAACAA+TGG + Chr7:12429287-12429306 MsG0780036719.01.T01:exon 20.0%
!!! CAATAGTATGTATTTTCTTT+TGG + Chr7:12434708-12434727 MsG0780036719.01.T01:three_prime_UTR 20.0%
!!! GAGTATTTTTATGATGAATT+TGG + Chr7:12429431-12429450 MsG0780036719.01.T01:CDS 20.0%
!!! GTAATCAAATTTTGTTTCAA+TGG + Chr7:12434499-12434518 MsG0780036719.01.T01:three_prime_UTR 20.0%
!!! GTATGTTTAAGTTACATAAA+AGG - Chr7:12431842-12431861 None:intergenic 20.0%
!!! TAAAGTGTTATTTGTTAGTT+AGG + Chr7:12433251-12433270 MsG0780036719.01.T01:intron 20.0%
!!! TGTTTCATCTATAGTTTTTT+TGG + Chr7:12432973-12432992 MsG0780036719.01.T01:intron 20.0%
!!! TTAATTTTGAGTTTTCTTTC+AGG + Chr7:12429242-12429261 MsG0780036719.01.T01:intron 20.0%
! AAAATCAAAGAGGAGAAAAA+AGG - Chr7:12432150-12432169 None:intergenic 25.0%
! AAATCAAAGAGGAGAAAAAA+GGG - Chr7:12432149-12432168 None:intergenic 25.0%
! AAGGACAAAAATTTCAACTA+AGG - Chr7:12432399-12432418 None:intergenic 25.0%
! AATACTGAAATATATAGGTG+AGG - Chr7:12432102-12432121 None:intergenic 25.0%
! AATTGAAATACGCAATTGAA+GGG - Chr7:12428472-12428491 None:intergenic 25.0%
! ACAATTAAAATGAGAAGAGT+TGG + Chr7:12433592-12433611 MsG0780036719.01.T01:intron 25.0%
! ACCAATTGAAGAATGAAATT+GGG - Chr7:12428438-12428457 None:intergenic 25.0%
! AGCATTATTGAAGTGTATTA+TGG - Chr7:12433567-12433586 None:intergenic 25.0%
! AGTTCAGTGTAAAAAATTGA+CGG + Chr7:12430985-12431004 MsG0780036719.01.T01:CDS 25.0%
! ATAAAGAACAATATCAGGAA+AGG - Chr7:12433891-12433910 None:intergenic 25.0%
! ATAATACACTTCAATAATGC+TGG + Chr7:12433566-12433585 MsG0780036719.01.T01:intron 25.0%
! ATTATGGTATTATCTTCTGT+TGG + Chr7:12433762-12433781 MsG0780036719.01.T01:intron 25.0%
! CTTAAAAATGGACCTATAAT+AGG + Chr7:12431993-12432012 MsG0780036719.01.T01:intron 25.0%
! GAAAAATAGAGACGTTAATT+TGG + Chr7:12430733-12430752 MsG0780036719.01.T01:CDS 25.0%
! GAAAATCCAACACATAAAAA+AGG - Chr7:12430299-12430318 None:intergenic 25.0%
! GTAAAACATTGTCTTGTATT+AGG + Chr7:12432913-12432932 MsG0780036719.01.T01:intron 25.0%
! GTAATAACAGAAGAGAAATA+TGG + Chr7:12433996-12434015 MsG0780036719.01.T01:intron 25.0%
! GTGAATACAATACAATATAC+TGG - Chr7:12428561-12428580 None:intergenic 25.0%
! TAAAATCTCATACTATAGTC+AGG - Chr7:12432363-12432382 None:intergenic 25.0%
! TAACAACTAAATGAAAAGAC+AGG - Chr7:12429847-12429866 None:intergenic 25.0%
! TACCAATTGAAGAATGAAAT+TGG - Chr7:12428439-12428458 None:intergenic 25.0%
! TATGATGAATTTGGAAACTT+TGG + Chr7:12429440-12429459 MsG0780036719.01.T01:CDS 25.0%
! TATTCAAGAGAGATATTATC+AGG - Chr7:12431523-12431542 None:intergenic 25.0%
! TATTGCAAATGTAAGATTCA+AGG - Chr7:12434568-12434587 None:intergenic 25.0%
! TGAATCTTACATTTGCAATA+TGG + Chr7:12434568-12434587 MsG0780036719.01.T01:three_prime_UTR 25.0%
! TGGCAATAAATCTCATAAAA+GGG + Chr7:12433612-12433631 MsG0780036719.01.T01:intron 25.0%
! TTAACAACTGTAGTTATGTA+TGG + Chr7:12432189-12432208 MsG0780036719.01.T01:intron 25.0%
! TTGGCAATAAATCTCATAAA+AGG + Chr7:12433611-12433630 MsG0780036719.01.T01:intron 25.0%
! TTTCAATGTACTAACATTCA+TGG + Chr7:12433101-12433120 MsG0780036719.01.T01:intron 25.0%
! TTTCTTTCAATTCTACGATA+AGG - Chr7:12430928-12430947 None:intergenic 25.0%
!! AACTACATTTTTACAAAAGC+TGG + Chr7:12429197-12429216 MsG0780036719.01.T01:intron 25.0%
!! AGAAAATAAAAAGCATAGTC+TGG - Chr7:12431695-12431714 None:intergenic 25.0%
!! ATTTGATTCTAAAAAAGTGC+TGG - Chr7:12431738-12431757 None:intergenic 25.0%
!! GTTTAAGTTACATAAAAGGT+TGG - Chr7:12431838-12431857 None:intergenic 25.0%
!! TAGATTGTTACTTAACTTCA+TGG + Chr7:12428871-12428890 MsG0780036719.01.T01:intron 25.0%
!! TTTTACGACAAAGTTATCTT+TGG + Chr7:12432714-12432733 MsG0780036719.01.T01:intron 25.0%
!!! AAAAGTTGATACGACATATA+AGG - Chr7:12433221-12433240 None:intergenic 25.0%
!!! AAATTGGGTTGATTTTAGAT+CGG - Chr7:12428423-12428442 None:intergenic 25.0%
!!! CAACGAATCATTGTTTTTAA+GGG - Chr7:12434363-12434382 None:intergenic 25.0%
!!! CAGCAAACTTTTAAAAACTT+TGG - Chr7:12431403-12431422 None:intergenic 25.0%
!!! CATGAAACATTCATGTTTTT+TGG + Chr7:12433488-12433507 MsG0780036719.01.T01:intron 25.0%
!!! CTATTATAGGTCCATTTTTA+AGG - Chr7:12431995-12432014 None:intergenic 25.0%
!!! CTTCAATCAAGTTGATTTAT+AGG - Chr7:12432247-12432266 None:intergenic 25.0%
!!! GATATGGATTGTGTTTTAAA+GGG + Chr7:12429504-12429523 MsG0780036719.01.T01:CDS 25.0%
!!! TAGATTGTTATTTCAATTCG+CGG + Chr7:12429087-12429106 MsG0780036719.01.T01:intron 25.0%
!!! TCAACGAATCATTGTTTTTA+AGG - Chr7:12434364-12434383 None:intergenic 25.0%
!!! TTGAGTTTGATTTGTTATGT+GGG + Chr7:12429529-12429548 MsG0780036719.01.T01:CDS 25.0%
!!! TTTAAAGTTTTTATCGGGAT+CGG + Chr7:12428729-12428748 MsG0780036719.01.T01:intron 25.0%
!!! TTTGAGTTTGATTTGTTATG+TGG + Chr7:12429528-12429547 MsG0780036719.01.T01:CDS 25.0%
!!! TTTTGAAACAATTGTTAAGG+AGG - Chr7:12433034-12433053 None:intergenic 25.0%
AAAAAGACTAACAAGCTCAT+AGG - Chr7:12431879-12431898 None:intergenic 30.0%
AAACAATTTGAACACACTAG+TGG - Chr7:12432958-12432977 None:intergenic 30.0%
AACAGAAATATACTGCCAAT+AGG - Chr7:12433083-12433102 None:intergenic 30.0%
AACTAATGAAGAACTCAACA+AGG + Chr7:12431009-12431028 MsG0780036719.01.T01:CDS 30.0%
AACTACAGTTGTTAAACTCA+AGG - Chr7:12432184-12432203 None:intergenic 30.0%
AATTTCAACTAAGGATGAAC+AGG - Chr7:12432390-12432409 None:intergenic 30.0%
ACCCAATTTCATTCTTCAAT+TGG + Chr7:12428434-12428453 MsG0780036719.01.T01:five_prime_UTR 30.0%
ACTGAAGCAAACATATAAGA+AGG + Chr7:12432469-12432488 MsG0780036719.01.T01:CDS 30.0%
AGATATGGAACATGTGATAA+AGG + Chr7:12431182-12431201 MsG0780036719.01.T01:CDS 30.0%
AGTTAGAACATTAACATTGC+TGG - Chr7:12430185-12430204 None:intergenic 30.0%
ATACTGTTGCTGATATTCAT+CGG - Chr7:12430870-12430889 None:intergenic 30.0%
ATGAACTAGTGGGAAAAAAA+AGG - Chr7:12432879-12432898 None:intergenic 30.0%
ATGAATTTGGAAACTTTGGA+AGG + Chr7:12429444-12429463 MsG0780036719.01.T01:CDS 30.0%
ATGACAACTGCAAAGAATAT+TGG + Chr7:12431369-12431388 MsG0780036719.01.T01:CDS 30.0%
ATGGACCTATAATAGGTAAT+AGG + Chr7:12432000-12432019 MsG0780036719.01.T01:intron 30.0%
CAACTTGATTGAAGATTCAT+AGG + Chr7:12432253-12432272 MsG0780036719.01.T01:intron 30.0%
CGTCTAACTGAAAATTGAAT+CGG - Chr7:12428363-12428382 None:intergenic 30.0%
CTGAAGCAAACATATAAGAA+GGG + Chr7:12432470-12432489 MsG0780036719.01.T01:CDS 30.0%
GAAACAAGATTTCAAAAGCT+TGG - Chr7:12431472-12431491 None:intergenic 30.0%
GAATTGAAATACGCAATTGA+AGG - Chr7:12428473-12428492 None:intergenic 30.0%
GACTTTGTCTTCTTATAAGA+AGG + Chr7:12429719-12429738 MsG0780036719.01.T01:CDS 30.0%
GAGTTCCATTAATGCAAAAT+AGG - Chr7:12429953-12429972 None:intergenic 30.0%
GATAAAGGATCTTAAGTCAA+AGG + Chr7:12431197-12431216 MsG0780036719.01.T01:CDS 30.0%
GTGATGAATATTTCAGACAA+CGG - Chr7:12428395-12428414 None:intergenic 30.0%
GTGTTACACAATTGAAGATA+TGG + Chr7:12431167-12431186 MsG0780036719.01.T01:CDS 30.0%
TAAACAACTTTCAAAATGCC+AGG + Chr7:12431965-12431984 MsG0780036719.01.T01:intron 30.0%
TATGAAGTCACACATATGAT+TGG - Chr7:12430136-12430155 None:intergenic 30.0%
TCTTATAAGAAGGAAGAGAA+TGG + Chr7:12429729-12429748 MsG0780036719.01.T01:CDS 30.0%
TGAAAGTGGAAAAATCAAAG+AGG - Chr7:12432160-12432179 None:intergenic 30.0%
TGATGAAGAAAACATCGATA+TGG + Chr7:12429488-12429507 MsG0780036719.01.T01:CDS 30.0%
TTAAACACAATTACTTCCTC+CGG + Chr7:12433445-12433464 MsG0780036719.01.T01:intron 30.0%
TTGAAGAAAAGCTAAATCTG+AGG + Chr7:12430498-12430517 MsG0780036719.01.T01:CDS 30.0%
! AAAATGACTTGCATAAGTAG+TGG + Chr7:12432685-12432704 MsG0780036719.01.T01:intron 30.0%
! AAACGCCTATTTTGCATTAA+TGG + Chr7:12429945-12429964 MsG0780036719.01.T01:intron 30.0%
! AGCAACATAGAAACATTTTG+AGG + Chr7:12430411-12430430 MsG0780036719.01.T01:CDS 30.0%
! ATAATTTGTGTCAACAAGAG+GGG + Chr7:12431620-12431639 MsG0780036719.01.T01:intron 30.0%
! ATGACTACTTTGAGAATGTT+AGG - Chr7:12432037-12432056 None:intergenic 30.0%
! CAAGGAATCGTAGTTTTTAA+GGG - Chr7:12434550-12434569 None:intergenic 30.0%
! GATAATTTGTGTCAACAAGA+GGG + Chr7:12431619-12431638 MsG0780036719.01.T01:intron 30.0%
! TCAAGGAATCGTAGTTTTTA+AGG - Chr7:12434551-12434570 None:intergenic 30.0%
! TGATAATTTGTGTCAACAAG+AGG + Chr7:12431618-12431637 MsG0780036719.01.T01:intron 30.0%
! TTAACTCGTCTTCTAAAGAA+AGG - Chr7:12430526-12430545 None:intergenic 30.0%
! TTGGATTTTCAATGACAACA+GGG + Chr7:12430309-12430328 MsG0780036719.01.T01:intron 30.0%
!! AGATAATGGAGAAGTTATTG+TGG + Chr7:12429362-12429381 MsG0780036719.01.T01:CDS 30.0%
!! ATCTAATGCTGATTTAAACG+AGG + Chr7:12431278-12431297 MsG0780036719.01.T01:CDS 30.0%
!! CAAAGTGTTGAAGATAATAC+CGG + Chr7:12429315-12429334 MsG0780036719.01.T01:CDS 30.0%
!! CGATATGGATTGTGTTTTAA+AGG + Chr7:12429503-12429522 MsG0780036719.01.T01:CDS 30.0%
!! TAGAGATTTGGGTTTGTTTT+TGG + Chr7:12429569-12429588 MsG0780036719.01.T01:CDS 30.0%
!! TGAGTTTGATTTGTTATGTG+GGG + Chr7:12429530-12429549 MsG0780036719.01.T01:CDS 30.0%
!! TGCACATATTATTTCTAACC+AGG - Chr7:12433329-12433348 None:intergenic 30.0%
!!! ACCTTTCTCTATTTTTGGAA+AGG + Chr7:12434266-12434285 MsG0780036719.01.T01:three_prime_UTR 30.0%
!!! TTTTGGTTCTCTCTAACTAT+TGG + Chr7:12432990-12433009 MsG0780036719.01.T01:intron 30.0%
!!! TTTTTTTTCCCACTAGTTCA+TGG + Chr7:12432878-12432897 MsG0780036719.01.T01:intron 30.0%
AAAGGAAAGGACAATTTGGA+AGG - Chr7:12433873-12433892 None:intergenic 35.0%
AAATACGCAATTGAAGGGAA+TGG - Chr7:12428467-12428486 None:intergenic 35.0%
AACACATCTTTGATCAGAAG+TGG - Chr7:12428664-12428683 None:intergenic 35.0%
AAGTTTCTTGAGGAGTAGAT+TGG + Chr7:12431305-12431324 MsG0780036719.01.T01:CDS 35.0%
AATATCTGTTCGCATTGTAC+AGG - Chr7:12433427-12433446 None:intergenic 35.0%
ACAGCTGAAGCAGTTAATTT+AGG + Chr7:12430773-12430792 MsG0780036719.01.T01:CDS 35.0%
ACCATAATACTTACTCCCTT+CGG - Chr7:12433750-12433769 None:intergenic 35.0%
ACTGAAATATATAGGTGAGG+TGG - Chr7:12432099-12432118 None:intergenic 35.0%
AGACGAGTTAATTCAAACAG+AGG + Chr7:12430535-12430554 MsG0780036719.01.T01:CDS 35.0%
AGAGTGTAGAGTTACTTGAA+AGG + Chr7:12431067-12431086 MsG0780036719.01.T01:intron 35.0%
AGTTTGGGAAAGATTGTTTG+AGG + Chr7:12430571-12430590 MsG0780036719.01.T01:CDS 35.0%
ATAGGATGAACATTTAGCAG+TGG + Chr7:12432271-12432290 MsG0780036719.01.T01:intron 35.0%
CAAGCTTTCTCAGTTCAATT+TGG + Chr7:12430649-12430668 MsG0780036719.01.T01:CDS 35.0%
CAAGTCCTTGAAATACAGAA+AGG - Chr7:12434217-12434236 None:intergenic 35.0%
CAGATTCAATACCAGATGTT+GGG + Chr7:12434109-12434128 MsG0780036719.01.T01:CDS 35.0%
CATATGTGTGACTTCATAAG+TGG + Chr7:12430138-12430157 MsG0780036719.01.T01:intron 35.0%
CTGAAATATATAGGTGAGGT+GGG - Chr7:12432098-12432117 None:intergenic 35.0%
CTTCTGATCAAAGATGTGTT+TGG + Chr7:12428664-12428683 MsG0780036719.01.T01:intron 35.0%
CTTTCTCAGTTCAATTTGGT+TGG + Chr7:12430653-12430672 MsG0780036719.01.T01:CDS 35.0%
GAACAATATCAGGAAAGGAA+AGG - Chr7:12433886-12433905 None:intergenic 35.0%
GAGATATTATCAGGTCTCTA+TGG - Chr7:12431514-12431533 None:intergenic 35.0%
GAGATTCTTCTTTGAACGAT+TGG + Chr7:12429628-12429647 MsG0780036719.01.T01:CDS 35.0%
GATCGTGAAACAAAAAGTCA+TGG - Chr7:12429147-12429166 None:intergenic 35.0%
GCCTTTCCAAAAATAGAGAA+AGG - Chr7:12434270-12434289 None:intergenic 35.0%
GGGAATTTCAAATGAAGTGT+TGG + Chr7:12430619-12430638 MsG0780036719.01.T01:CDS 35.0%
GTTAAGGAGGATTGATAAGA+AGG - Chr7:12433021-12433040 None:intergenic 35.0%
GTTAATCACGTTCAAAAGTG+TGG + Chr7:12429050-12429069 MsG0780036719.01.T01:intron 35.0%
GTTGATCACGGTAAAAAGTA+TGG + Chr7:12428834-12428853 MsG0780036719.01.T01:intron 35.0%
TACAAGGACAATGACATTGT+AGG + Chr7:12434640-12434659 MsG0780036719.01.T01:three_prime_UTR 35.0%
TATACTGCCAATAGGATGTT+TGG - Chr7:12433075-12433094 None:intergenic 35.0%
TCAGATTCAATACCAGATGT+TGG + Chr7:12434108-12434127 MsG0780036719.01.T01:CDS 35.0%
TCTATGGCAGTATAATGTAG+TGG - Chr7:12431498-12431517 None:intergenic 35.0%
TCTGGCCTATTACCTATTAT+AGG - Chr7:12432008-12432027 None:intergenic 35.0%
TTCCCCTGGAAAAGAAAAAT+AGG - Chr7:12434045-12434064 None:intergenic 35.0%
! AACTTTGGAAGGTGAATTAG+AGG + Chr7:12429455-12429474 MsG0780036719.01.T01:CDS 35.0%
! ACTTTGGAAGGTGAATTAGA+GGG + Chr7:12429456-12429475 MsG0780036719.01.T01:CDS 35.0%
! ACTTTTGAACGTGATTAACC+AGG - Chr7:12429049-12429068 None:intergenic 35.0%
! ATAAAAAGCATAGTCTGGCT+TGG - Chr7:12431690-12431709 None:intergenic 35.0%
! ATGGCACGTATTTTCTTTTG+CGG + Chr7:12434518-12434537 MsG0780036719.01.T01:three_prime_UTR 35.0%
! CTTCATTTGAAATTCCCTTC+AGG - Chr7:12430616-12430635 None:intergenic 35.0%
! GATCGACCTTTCTCTATTTT+TGG + Chr7:12434261-12434280 MsG0780036719.01.T01:three_prime_UTR 35.0%
! GTTGGATTTTCAATGACAAC+AGG + Chr7:12430308-12430327 MsG0780036719.01.T01:intron 35.0%
! TAAAAAGCATAGTCTGGCTT+GGG - Chr7:12431689-12431708 None:intergenic 35.0%
! TTTTTGCTTACAATCGAGAC+CGG - Chr7:12433467-12433486 None:intergenic 35.0%
!! CTATTGTATGGCTTTGGATA+TGG + Chr7:12432795-12432814 MsG0780036719.01.T01:intron 35.0%
!! CTCCTATTTTTCTTTTCCAG+GGG + Chr7:12434040-12434059 MsG0780036719.01.T01:intron 35.0%
!! GCTCCTATTTTTCTTTTCCA+GGG + Chr7:12434039-12434058 MsG0780036719.01.T01:intron 35.0%
!! TAAAAGTTTGCTGACACAGT+TGG + Chr7:12431410-12431429 MsG0780036719.01.T01:CDS 35.0%
!! TAGAAAAGGGTATCGTATGT+GGG + Chr7:12429865-12429884 MsG0780036719.01.T01:intron 35.0%
!! TCTTTTTATGGTAGTCTTGC+TGG + Chr7:12433158-12433177 MsG0780036719.01.T01:intron 35.0%
!! TGCTCCTATTTTTCTTTTCC+AGG + Chr7:12434038-12434057 MsG0780036719.01.T01:intron 35.0%
!! TTAGAAAAGGGTATCGTATG+TGG + Chr7:12429864-12429883 MsG0780036719.01.T01:intron 35.0%
!!! AACTTCTACCTGTTTTTGTC+TGG + Chr7:12432831-12432850 MsG0780036719.01.T01:intron 35.0%
!!! TAAATTGTTGGCTCCGATTT+TGG + Chr7:12433389-12433408 MsG0780036719.01.T01:intron 35.0%
!!! TGCTGTCCTTTTTTATGTGT+TGG + Chr7:12430290-12430309 MsG0780036719.01.T01:intron 35.0%
!!! TGTGGATTTTGAAATGAGTG+TGG + Chr7:12429380-12429399 MsG0780036719.01.T01:CDS 35.0%
AAAGGCAAGAGACTACTGTT+GGG + Chr7:12434284-12434303 MsG0780036719.01.T01:three_prime_UTR 40.0%
AACATTCATGGCATGCTTCT+AGG + Chr7:12433113-12433132 MsG0780036719.01.T01:intron 40.0%
AATACCGGTGATGTTGATGT+TGG + Chr7:12429330-12429349 MsG0780036719.01.T01:CDS 40.0%
AATACTTACTCCCTTCGGTT+CGG - Chr7:12433745-12433764 None:intergenic 40.0%
AATCTCGTAAAACTGCTCCT+CGG - Chr7:12429673-12429692 None:intergenic 40.0%
ACAACAGGGAATGTTGAAGA+CGG + Chr7:12430323-12430342 MsG0780036719.01.T01:intron 40.0%
ACAACTTTCAAAATGCCAGG+CGG + Chr7:12431968-12431987 MsG0780036719.01.T01:intron 40.0%
ACAAGAAACTGAATGCCAGT+TGG + Chr7:12430826-12430845 MsG0780036719.01.T01:CDS 40.0%
ACAATATATCTCCCAGACCT+GGG - Chr7:12434427-12434446 None:intergenic 40.0%
ACACTTCATGCTGAGATTTC+TGG + Chr7:12429594-12429613 MsG0780036719.01.T01:CDS 40.0%
ACATCTTTGATCAGAAGTGG+CGG - Chr7:12428661-12428680 None:intergenic 40.0%
ACCGAAGGGAGTAAGTATTA+TGG + Chr7:12433746-12433765 MsG0780036719.01.T01:intron 40.0%
ACGAGGAAGTAAGTTTCTTG+AGG + Chr7:12431295-12431314 MsG0780036719.01.T01:CDS 40.0%
ACTCTCCTATGATTCAGTTC+AGG - Chr7:12433790-12433809 None:intergenic 40.0%
AGACTTTCACATTCACCAAC+TGG - Chr7:12430844-12430863 None:intergenic 40.0%
AGCTACTACCAGACAAAAAC+AGG - Chr7:12432842-12432861 None:intergenic 40.0%
AGGAAGAAGCAATCGAAGTT+TGG + Chr7:12430555-12430574 MsG0780036719.01.T01:CDS 40.0%
AGTAGATTGGAATGCTTGGA+GGG + Chr7:12431318-12431337 MsG0780036719.01.T01:CDS 40.0%
ATAGATGGTCCTAGGTTACA+AGG + Chr7:12434624-12434643 MsG0780036719.01.T01:three_prime_UTR 40.0%
ATAGGATGTTTGGACATGAG+TGG - Chr7:12433065-12433084 None:intergenic 40.0%
ATCACCAATCCATGAACTAG+TGG - Chr7:12432890-12432909 None:intergenic 40.0%
ATGCAGATCAATTGATACCC+TGG - Chr7:12431594-12431613 None:intergenic 40.0%
CAGGAAAGGAAAGGACAATT+TGG - Chr7:12433877-12433896 None:intergenic 40.0%
CTCATGTCCAAACATCCTAT+TGG + Chr7:12433065-12433084 MsG0780036719.01.T01:intron 40.0%
CTTGAAATACAGAAAGGTCG+CGG - Chr7:12434211-12434230 None:intergenic 40.0%
GAGGATGCTTGAGAAATCTT+TGG + Chr7:12430430-12430449 MsG0780036719.01.T01:CDS 40.0%
GGAAGAAGCAATCGAAGTTT+GGG + Chr7:12430556-12430575 MsG0780036719.01.T01:CDS 40.0%
GGGAAATGACATCATACGAA+AGG + Chr7:12434330-12434349 MsG0780036719.01.T01:three_prime_UTR 40.0%
GTGTTCTCAAGTTAGAGACA+TGG + Chr7:12430898-12430917 MsG0780036719.01.T01:CDS 40.0%
GTTAAACTCAAGGCTGAAAG+TGG - Chr7:12432174-12432193 None:intergenic 40.0%
GTTACTTGAAAGGCAGCTAA+AGG + Chr7:12431077-12431096 MsG0780036719.01.T01:intron 40.0%
TACAATATATCTCCCAGACC+TGG - Chr7:12434428-12434447 None:intergenic 40.0%
TATATAGGTGAGGTGGGAAT+CGG - Chr7:12432092-12432111 None:intergenic 40.0%
TCAATTCGCGGCTAAAATTG+TGG + Chr7:12429099-12429118 MsG0780036719.01.T01:intron 40.0%
TCACCAATCCATGAACTAGT+GGG - Chr7:12432889-12432908 None:intergenic 40.0%
TCGAAGTTTGATCATCCTCT+TGG - Chr7:12430358-12430377 None:intergenic 40.0%
TGTCATTGTCCTTGTAACCT+AGG - Chr7:12434636-12434655 None:intergenic 40.0%
TGTGCATAAAGCATGCTATG+TGG + Chr7:12433343-12433362 MsG0780036719.01.T01:intron 40.0%
TTCCAGCTTATCTCTAAGCT+CGG - Chr7:12430696-12430715 None:intergenic 40.0%
TTCTCAAAGTAGTCATGCTC+AGG + Chr7:12432041-12432060 MsG0780036719.01.T01:intron 40.0%
TTTCCCACTAGTTCATGGAT+TGG + Chr7:12432883-12432902 MsG0780036719.01.T01:intron 40.0%
! AAGTTTGTTCTCGCTTGCTA+AGG - Chr7:12432438-12432457 None:intergenic 40.0%
! AGAGTCTAGACTTTTCACAC+TGG - Chr7:12430100-12430119 None:intergenic 40.0%
! AGCAAGCGAGAACAAACTTT+TGG + Chr7:12432439-12432458 MsG0780036719.01.T01:CDS 40.0%
! AGGGTATCAATTGATCTGCA+TGG + Chr7:12431593-12431612 MsG0780036719.01.T01:intron 40.0%
! GCTTTGGATATGGTTTCTGT+TGG + Chr7:12432805-12432824 MsG0780036719.01.T01:intron 40.0%
!! ACATTTAGCAGTGGTTTGCT+TGG + Chr7:12432280-12432299 MsG0780036719.01.T01:intron 40.0%
!! AGAAAAGGGTATCGTATGTG+GGG + Chr7:12429866-12429885 MsG0780036719.01.T01:intron 40.0%
!! CGTATCAACTTTTTCTTCGC+TGG + Chr7:12433228-12433247 MsG0780036719.01.T01:intron 40.0%
!! GAGAGAGCGTCTTAATAAGA+AGG + Chr7:12431440-12431459 MsG0780036719.01.T01:CDS 40.0%
!! GCTGACTCTTTTAAAGACTG+TGG + Chr7:12431033-12431052 MsG0780036719.01.T01:CDS 40.0%
!! GGTTCTGAGGTTAGAGATTT+GGG + Chr7:12429558-12429577 MsG0780036719.01.T01:CDS 40.0%
!! GTTGGAGGTGTTTCAGATAA+TGG + Chr7:12429348-12429367 MsG0780036719.01.T01:CDS 40.0%
!!! ACACCCACTTTTTGTAAACC+TGG + Chr7:12429017-12429036 MsG0780036719.01.T01:intron 40.0%
!!! CACCCACTTTTTGTAAACCT+GGG + Chr7:12429018-12429037 MsG0780036719.01.T01:intron 40.0%
!!! TGGGTTGATTTTAGATCGGT+TGG - Chr7:12428419-12428438 None:intergenic 40.0%
AAAGTAGTCATGCTCAGGTC+GGG + Chr7:12432046-12432065 MsG0780036719.01.T01:intron 45.0%
ACCTCCAACATCAACATCAC+CGG - Chr7:12429337-12429356 None:intergenic 45.0%
ACTGTGAGGAGAATAGATGC+AGG + Chr7:12434132-12434151 MsG0780036719.01.T01:CDS 45.0%
AGAGACTACTGTTGGGATCT+AGG + Chr7:12434291-12434310 MsG0780036719.01.T01:three_prime_UTR 45.0%
AGGAGGATAGCTGCAAGTAA+AGG - Chr7:12432418-12432437 None:intergenic 45.0%
AGGGGAATAGGAAGATTGTC+AGG + Chr7:12431638-12431657 MsG0780036719.01.T01:intron 45.0%
AGTACTTGGCATAGAGTGCA+TGG + Chr7:12433300-12433319 MsG0780036719.01.T01:intron 45.0%
ATAACAGAGACCGAACCGAA+GGG + Chr7:12433732-12433751 MsG0780036719.01.T01:intron 45.0%
ATCCGAGCTTAGAGATAAGC+TGG + Chr7:12430691-12430710 MsG0780036719.01.T01:CDS 45.0%
CAAAGTAGTCATGCTCAGGT+CGG + Chr7:12432045-12432064 MsG0780036719.01.T01:intron 45.0%
CACTGTAGCATTGTTGTGTC+CGG + Chr7:12428951-12428970 MsG0780036719.01.T01:intron 45.0%
CGCCCAGGTTTACAAAAAGT+GGG - Chr7:12429023-12429042 None:intergenic 45.0%
CGCGACCTTTCTGTATTTCA+AGG + Chr7:12434209-12434228 MsG0780036719.01.T01:CDS 45.0%
CTGCTGCTATTGTATGGCTT+TGG + Chr7:12432789-12432808 MsG0780036719.01.T01:intron 45.0%
CTTTGAACGATTGGCAAGAG+AGG + Chr7:12429637-12429656 MsG0780036719.01.T01:CDS 45.0%
GAAAGGCAAGAGACTACTGT+TGG + Chr7:12434283-12434302 MsG0780036719.01.T01:three_prime_UTR 45.0%
GAATCCTTACGAGTGCAGTA+CGG + Chr7:12434382-12434401 MsG0780036719.01.T01:three_prime_UTR 45.0%
GACTTTGTCTTCTGAGCATG+AGG + Chr7:12432514-12432533 MsG0780036719.01.T01:CDS 45.0%
GAGAATGTTAGGCTCGAATC+TGG - Chr7:12432026-12432045 None:intergenic 45.0%
GAGGAGTAGATTGGAATGCT+TGG + Chr7:12431314-12431333 MsG0780036719.01.T01:CDS 45.0%
GAGTAGATTGGAATGCTTGG+AGG + Chr7:12431317-12431336 MsG0780036719.01.T01:CDS 45.0%
GCTATGCTGCTGCTATTGTA+TGG + Chr7:12432783-12432802 MsG0780036719.01.T01:intron 45.0%
TACAAGGACACTGACACTGT+AGG + Chr7:12434454-12434473 MsG0780036719.01.T01:three_prime_UTR 45.0%
TATAACAGAGACCGAACCGA+AGG + Chr7:12433731-12433750 MsG0780036719.01.T01:intron 45.0%
TCGCCCAGGTTTACAAAAAG+TGG - Chr7:12429024-12429043 None:intergenic 45.0%
TGGCACCTGAACTGAATCAT+AGG + Chr7:12433782-12433801 MsG0780036719.01.T01:intron 45.0%
TGTGTCAACAAGAGGGGAAT+AGG + Chr7:12431626-12431645 MsG0780036719.01.T01:intron 45.0%
! TTTGCTGACACAGTTGGCTT+TGG + Chr7:12431416-12431435 MsG0780036719.01.T01:CDS 45.0%
! TTTGTTCTCGCTTGCTAAGG+AGG - Chr7:12432435-12432454 None:intergenic 45.0%
!! GATTTGTTATGTGGGGTGCT+GGG + Chr7:12429537-12429556 MsG0780036719.01.T01:CDS 45.0%
!! GGGTTCTGAGGTTAGAGATT+TGG + Chr7:12429557-12429576 MsG0780036719.01.T01:CDS 45.0%
!! TGATTTGTTATGTGGGGTGC+TGG + Chr7:12429536-12429555 MsG0780036719.01.T01:CDS 45.0%
!! TGGTTTGCTTGGCTGATGAT+GGG + Chr7:12432291-12432310 MsG0780036719.01.T01:intron 45.0%
!! TTGGCTGATGATGGGATGTA+TGG + Chr7:12432299-12432318 MsG0780036719.01.T01:intron 45.0%
!! TTTTCGATGTCTTGTTCCCC+TGG - Chr7:12434059-12434078 None:intergenic 45.0%
!! TTACAAAAAAAAAATATTAA+TGG - Chr7:12428510-12428529 None:intergenic 5.0%
!!! TATTTTTTTAAAGTTTTTAT+CGG + Chr7:12428723-12428742 MsG0780036719.01.T01:intron 5.0%
AATGCGCGTGAGATCCTGAA+GGG + Chr7:12430599-12430618 MsG0780036719.01.T01:CDS 50.0%
ACAGGGAATGTTGAAGACGG+TGG + Chr7:12430326-12430345 MsG0780036719.01.T01:intron 50.0%
ACCATCTATCTCCCGAACCT+GGG - Chr7:12434613-12434632 None:intergenic 50.0%
ACCGGTGATGTTGATGTTGG+AGG + Chr7:12429333-12429352 MsG0780036719.01.T01:CDS 50.0%
ACTACTGTTGGGATCTAGGC+AGG + Chr7:12434295-12434314 MsG0780036719.01.T01:three_prime_UTR 50.0%
ACTGACCACTTGAGTGGTGT+AGG + Chr7:12431913-12431932 MsG0780036719.01.T01:intron 50.0%
AGACGGTGGAAATGTCCAAG+AGG + Chr7:12430340-12430359 MsG0780036719.01.T01:CDS 50.0%
ATCACCGTACTGCACTCGTA+AGG - Chr7:12434389-12434408 None:intergenic 50.0%
ATCAGAAGTGGCGGTAGTGT+CGG - Chr7:12428652-12428671 None:intergenic 50.0%
CACACTACTGACCACTTGAG+TGG + Chr7:12431907-12431926 MsG0780036719.01.T01:intron 50.0%
CACTCAAGTGGTCAGTAGTG+TGG - Chr7:12431909-12431928 None:intergenic 50.0%
CTACTGTTGGGATCTAGGCA+GGG + Chr7:12434296-12434315 MsG0780036719.01.T01:three_prime_UTR 50.0%
CTGTTCGCATTGTACAGGTG+AGG - Chr7:12433422-12433441 None:intergenic 50.0%
GAAAGCCTACACCACTCAAG+TGG - Chr7:12431921-12431940 None:intergenic 50.0%
GAACGATTGGCAAGAGAGGT+TGG + Chr7:12429641-12429660 MsG0780036719.01.T01:CDS 50.0%
GCATAGAGTGCATGGTTTCC+TGG + Chr7:12433308-12433327 MsG0780036719.01.T01:intron 50.0%
GGAAGATTGTCAGGAGCCTA+TGG + Chr7:12431647-12431666 MsG0780036719.01.T01:intron 50.0%
GTGAGGAGGCAGTCCAAAAT+CGG - Chr7:12433405-12433424 None:intergenic 50.0%
TACCAGATGTTGGGACTGTG+AGG + Chr7:12434118-12434137 MsG0780036719.01.T01:CDS 50.0%
TGCACTGTCAGCTAGACTCT+CGG - Chr7:12431232-12431251 None:intergenic 50.0%
TGCCAGGCGGTCCTTAAAAA+TGG + Chr7:12431981-12432000 MsG0780036719.01.T01:intron 50.0%
TTCGCATTGTACAGGTGAGG+AGG - Chr7:12433419-12433438 None:intergenic 50.0%
TTCGGGAGATAGATGGTCCT+AGG + Chr7:12434616-12434635 MsG0780036719.01.T01:three_prime_UTR 50.0%
TTGCTTACAATCGAGACCGG+AGG - Chr7:12433464-12433483 None:intergenic 50.0%
TTGTCAGGAGCCTATGGTCT+AGG + Chr7:12431653-12431672 MsG0780036719.01.T01:intron 50.0%
! AGAGAGGTTGGTTGAATCCG+AGG + Chr7:12429653-12429672 MsG0780036719.01.T01:CDS 50.0%
! CAGTGTCGAGTAGTGCTCTA+TGG - Chr7:12433819-12433838 None:intergenic 50.0%
! GACTGATTTACAGCTGCAGC+AGG + Chr7:12431101-12431120 MsG0780036719.01.T01:intron 50.0%
!! ATATGGTGCTGCAGCTGTAG+AGG + Chr7:12434585-12434604 MsG0780036719.01.T01:three_prime_UTR 50.0%
!! GCTGATGATGGGATGTATGG+AGG + Chr7:12432302-12432321 MsG0780036719.01.T01:intron 50.0%
!! GTCCATTTTTAAGGACCGCC+TGG - Chr7:12431986-12432005 None:intergenic 50.0%
!! GTGGTTTGCTTGGCTGATGA+TGG + Chr7:12432290-12432309 MsG0780036719.01.T01:intron 50.0%
ACGAGTGCAGTACGGTGATG+CGG + Chr7:12434390-12434409 MsG0780036719.01.T01:three_prime_UTR 55.0%
CAATGCGCGTGAGATCCTGA+AGG + Chr7:12430598-12430617 MsG0780036719.01.T01:CDS 55.0%
CCTATGGTCTAGGCAACGTC+AGG + Chr7:12431663-12431682 MsG0780036719.01.T01:intron 55.0%
CCTGACGTTGCCTAGACCAT+AGG - Chr7:12431666-12431685 None:intergenic 55.0%
CTCCTCACAGTCCCAACATC+TGG - Chr7:12434123-12434142 None:intergenic 55.0%
CTGTAGAGGATCCCAGGTCT+GGG + Chr7:12434413-12434432 MsG0780036719.01.T01:three_prime_UTR 55.0%
CTGTAGAGGATCCCAGGTTC+GGG + Chr7:12434599-12434618 MsG0780036719.01.T01:three_prime_UTR 55.0%
GACCATCTATCTCCCGAACC+TGG - Chr7:12434614-12434633 None:intergenic 55.0%
GAGTCTAGCTGACAGTGCAG+AGG + Chr7:12431233-12431252 MsG0780036719.01.T01:CDS 55.0%
GCGCGACACATGGTTGATCA+CGG + Chr7:12428822-12428841 MsG0780036719.01.T01:intron 55.0%
GCTGTAGAGGATCCCAGGTT+CGG + Chr7:12434598-12434617 MsG0780036719.01.T01:three_prime_UTR 55.0%
GGAGGGATCACTGCAGAAAG+CGG + Chr7:12431335-12431354 MsG0780036719.01.T01:CDS 55.0%
GTCGTGTTCGTGTCAGACAC+CGG - Chr7:12428973-12428992 None:intergenic 55.0%
TAGGCAGGGACTTGCGGATT+GGG + Chr7:12434310-12434329 MsG0780036719.01.T01:three_prime_UTR 55.0%
TAGGTGAGGTGGGAATCGGT+AGG - Chr7:12432088-12432107 None:intergenic 55.0%
TCCCAGGTTCGGGAGATAGA+TGG + Chr7:12434609-12434628 MsG0780036719.01.T01:three_prime_UTR 55.0%
TTGTAAACCTGGGCGACACC+TGG + Chr7:12429028-12429047 MsG0780036719.01.T01:intron 55.0%
! TGATTAACCAGGTGTCGCCC+AGG - Chr7:12429038-12429057 None:intergenic 55.0%
!! TCGGGATCGGTGTTAGTGTC+TGG + Chr7:12428742-12428761 MsG0780036719.01.T01:intron 55.0%
ACACTCACTCGCGCGACACA+TGG + Chr7:12428812-12428831 MsG0780036719.01.T01:intron 60.0%
AGTCATGCTCAGGTCGGGCA+AGG + Chr7:12432051-12432070 MsG0780036719.01.T01:intron 60.0%
ATGCGGCTGTAGAGGATCCC+AGG + Chr7:12434407-12434426 MsG0780036719.01.T01:three_prime_UTR 60.0%
CTAGGCAGGGACTTGCGGAT+TGG + Chr7:12434309-12434328 MsG0780036719.01.T01:three_prime_UTR 60.0%
CTGCAGCTGTAGAGGATCCC+AGG + Chr7:12434593-12434612 MsG0780036719.01.T01:three_prime_UTR 60.0%
GAGGTGGGAATCGGTAGGCT+AGG - Chr7:12432083-12432102 None:intergenic 60.0%
GCTGTAGAGGATCCCAGGTC+TGG + Chr7:12434412-12434431 MsG0780036719.01.T01:three_prime_UTR 60.0%
GGAATCGGTAGGCTAGGCTC+GGG - Chr7:12432077-12432096 None:intergenic 60.0%
GGGAATCGGTAGGCTAGGCT+CGG - Chr7:12432078-12432097 None:intergenic 60.0%
GGGATCACTGCAGAAAGCGG+AGG + Chr7:12431338-12431357 MsG0780036719.01.T01:CDS 60.0%
GGGATCTAGGCAGGGACTTG+CGG + Chr7:12434304-12434323 MsG0780036719.01.T01:three_prime_UTR 60.0%
GTACGGTGATGCGGCTGTAG+AGG + Chr7:12434399-12434418 MsG0780036719.01.T01:three_prime_UTR 60.0%
!! ATGTGGGGTGCTGGGTTCTG+AGG + Chr7:12429545-12429564 MsG0780036719.01.T01:CDS 60.0%
CAGCAGGCAGTAGCGTCTGC+TGG + Chr7:12431117-12431136 MsG0780036719.01.T01:intron 65.0%
Chromosome Type Strat End Strand Name
Chr7 gene 12428345 12434731 12428345 ID=MsG0780036719.01;Name=MsG0780036719.01
Chr7 mRNA 12428345 12434731 12428345 ID=MsG0780036719.01.T01;Parent=MsG0780036719.01;Name=MsG0780036719.01.T01;_AED=0.31;_eAED=0.31;_QI=153|0.8|0.66|1|0.8|0.66|6|474|604
Chr7 exon 12428345 12428455 12428345 ID=MsG0780036719.01.T01:exon:2555;Parent=MsG0780036719.01.T01
Chr7 exon 12429264 12429750 12429264 ID=MsG0780036719.01.T01:exon:2556;Parent=MsG0780036719.01.T01
Chr7 exon 12430330 12431054 12430330 ID=MsG0780036719.01.T01:exon:2557;Parent=MsG0780036719.01.T01
Chr7 exon 12431123 12431461 12431123 ID=MsG0780036719.01.T01:exon:2558;Parent=MsG0780036719.01.T01
Chr7 exon 12432428 12432535 12432428 ID=MsG0780036719.01.T01:exon:2559;Parent=MsG0780036719.01.T01
Chr7 exon 12434060 12434731 12434060 ID=MsG0780036719.01.T01:exon:2560;Parent=MsG0780036719.01.T01
Chr7 five_prime_UTR 12428345 12428455 12428345 ID=MsG0780036719.01.T01:five_prime_utr;Parent=MsG0780036719.01.T01
Chr7 five_prime_UTR 12429264 12429305 12429264 ID=MsG0780036719.01.T01:five_prime_utr;Parent=MsG0780036719.01.T01
Chr7 CDS 12429306 12429750 12429306 ID=MsG0780036719.01.T01:cds;Parent=MsG0780036719.01.T01
Chr7 CDS 12430330 12431054 12430330 ID=MsG0780036719.01.T01:cds;Parent=MsG0780036719.01.T01
Chr7 CDS 12431123 12431461 12431123 ID=MsG0780036719.01.T01:cds;Parent=MsG0780036719.01.T01
Chr7 CDS 12432428 12432535 12432428 ID=MsG0780036719.01.T01:cds;Parent=MsG0780036719.01.T01
Chr7 CDS 12434060 12434257 12434060 ID=MsG0780036719.01.T01:cds;Parent=MsG0780036719.01.T01
Chr7 three_prime_UTR 12434258 12434731 12434258 ID=MsG0780036719.01.T01:three_prime_utr;Parent=MsG0780036719.01.T01
Gene Sequence

>MsG0780036719.01.T01

ATGGAAACTCAAAGTGTTGAAGATAATACCGGTGATGTTGATGTTGGAGGTGTTTCAGATAATGGAGAAGTTATTGTGGATTTTGAAATGAGTGTGGTATATTTCTCTGAGAAAGTTTCAAATTTGAGTATTTTTATGATGAATTTGGAAACTTTGGAAGGTGAATTAGAGGGTTTAGTTTGTGATGAAGAAAACATCGATATGGATTGTGTTTTAAAGGGTTTTGAGTTTGATTTGTTATGTGGGGTGCTGGGTTCTGAGGTTAGAGATTTGGGTTTGTTTTTGGATACACTTCATGCTGAGATTTCTGGTTCTAGAGAGAGAGATTCTTCTTTGAACGATTGGCAAGAGAGGTTGGTTGAATCCGAGGAGCAGTTTTACGAGATTAAGAAACAATCTTTTAGTTTTGAAAGGACTTTGTCTTCTTATAAGAAGGAAGAGAATGGGAATGTTGAAGACGGTGGAAATGTCCAAGAGGATGATCAAACTTCGAATGTAAACAACATGATGAACATGCAAACGACTGAGCAACATAGAAACATTTTGAGGATGCTTGAGAAATCTTTGGCAAATGAAATAGATCTCGAGAAGAATTTCAACGACTCGAAGAAAATTGAAGAAAAGCTAAATCTGAGGATCCTTTCTTTAGAAGACGAGTTAATTCAAACAGAGGAAGAAGCAATCGAAGTTTGGGAAAGATTGTTTGAGGCAGACAATGCGCGTGAGATCCTGAAGGGAATTTCAAATGAAGTGTTGGCTAAACTCAAGCTTTCTCAGTTCAATTTGGTTGGTTTAAGAAAAAGTGAATCCGAGCTTAGAGATAAGCTGGAAACTTCTATAGAGCAATTGAAAAATAGAGACGTTAATTTGGAAAAGATTGAAAGCAGCACAGCTGAAGCAGTTAATTTAGGCGACAAAGTGTGCTCACTTGAGAAGCAGCTACAAGAAACTGAATGCCAGTTGGTGAATGTGAAAGTCTCTGCCGATGAATATCAGCAACAGTATAATGTTGTGTGTTCTCAAGTTAGAGACATGGATAACCTTATCGTAGAATTGAAAGAAAATGCAAAAAATGCAGAAAATCGAGCTAATGCTGCAGAAGTTCAGTGTAAAAAATTGACGGAAACTAATGAAGAACTCAACAAGGAGCTGACTCTTTTAAAGACTGTGGCAGTAGCGTCTGCTGGAGCTAGTGAAGAGAAGCAAAAGATGTTGTGTTACACAATTGAAGATATGGAACATGTGATAAAGGATCTTAAGTCAAAGGTTTCTAAAGCCGAGAGTCTAGCTGACAGTGCAGAGGACAAGTGTATCATATTATCTGAATCTAATGCTGATTTAAACGAGGAAGTAAGTTTCTTGAGGAGTAGATTGGAATGCTTGGAGGGATCACTGCAGAAAGCGGAGGAAGCGAAAATGACAACTGCAAAGAATATTGGAAAGCAAACCAAAGTTTTTAAAAGTTTGCTGACACAGTTGGCTTTGGAGAGAGAGCGTCTTAATAAGAAGCTATCCTCCTTAGCAAGCGAGAACAAACTTTTGGCAGTGAAACTGAAGCAAACATATAAGAAGGGTTCTTCTAAAGAAGTTAGTGCGACTTTGTCTTCTGAGCATGAGGGGAACAAGACATCGAAAAACTCATCTGCAAATGACAATGAAGTAAAGTCAGATTCAATACCAGATGTTGGGACTGTGAGGAGAATAGATGCAGGAGTTCTTACTTTTAAGCACTTATTGATATCATTGTTTGTCTTGCTGCTTTCAGCCGCGACCTTTCTGTATTTCAAGGACTTGAATGTTGATGTCAGTCTATGA

Protein sequence

>MsG0780036719.01.T01

METQSVEDNTGDVDVGGVSDNGEVIVDFEMSVVYFSEKVSNLSIFMMNLETLEGELEGLVCDEENIDMDCVLKGFEFDLLCGVLGSEVRDLGLFLDTLHAEISGSRERDSSLNDWQERLVESEEQFYEIKKQSFSFERTLSSYKKEENGNVEDGGNVQEDDQTSNVNNMMNMQTTEQHRNILRMLEKSLANEIDLEKNFNDSKKIEEKLNLRILSLEDELIQTEEEAIEVWERLFEADNAREILKGISNEVLAKLKLSQFNLVGLRKSESELRDKLETSIEQLKNRDVNLEKIESSTAEAVNLGDKVCSLEKQLQETECQLVNVKVSADEYQQQYNVVCSQVRDMDNLIVELKENAKNAENRANAAEVQCKKLTETNEELNKELTLLKTVAVASAGASEEKQKMLCYTIEDMEHVIKDLKSKVSKAESLADSAEDKCIILSESNADLNEEVSFLRSRLECLEGSLQKAEEAKMTTAKNIGKQTKVFKSLLTQLALERERLNKKLSSLASENKLLAVKLKQTYKKGSSKEVSATLSSEHEGNKTSKNSSANDNEVKSDSIPDVGTVRRIDAGVLTFKHLLISLFVLLLSAATFLYFKDLNVDVSL*