AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380016765.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380016765.01.T01 MTR_3g095080 97.541 244 5 1 1 243 1 244 0.0 501
MsG0380016765.01.T01 MTR_3g095080 87.705 244 5 2 1 243 1 220 5.86e-159 439
MsG0380016765.01.T01 MTR_3g095080 95.789 190 7 1 1 189 1 190 8.67e-137 382
MsG0380016765.01.T01 MTR_8g092140 62.857 245 70 13 6 243 4 234 5.51e-88 260
MsG0380016765.01.T01 MTR_8g007270 79.121 91 19 0 143 233 130 220 6.29e-48 158
MsG0380016765.01.T01 MTR_5g043880 66.667 81 27 0 143 223 100 180 1.39e-33 122
MsG0380016765.01.T01 MTR_7g079010 33.953 215 117 4 32 234 6 207 1.48e-32 118
MsG0380016765.01.T01 MTR_1g086790 60.638 94 35 2 139 232 131 222 7.24e-32 119
MsG0380016765.01.T01 MTR_3g031220 64.103 78 28 0 146 223 344 421 1.43e-30 118
MsG0380016765.01.T01 MTR_3g031220 47.887 71 32 2 157 223 184 253 1.08e-14 73.2
MsG0380016765.01.T01 MTR_3g104750 57.500 80 34 0 147 226 84 163 2.04e-30 111
MsG0380016765.01.T01 MTR_4g094588 70.423 71 21 0 153 223 164 234 3.28e-30 115
MsG0380016765.01.T01 MTR_2g033820 68.493 73 23 0 151 223 187 259 3.62e-30 115
MsG0380016765.01.T01 MTR_5g074400 41.420 169 79 4 69 223 314 476 5.08e-30 117
MsG0380016765.01.T01 MTR_5g074400 56.140 57 24 1 167 223 243 298 1.76e-14 72.8
MsG0380016765.01.T01 MTR_5g094430 60.526 76 30 0 148 223 211 286 6.00e-30 115
MsG0380016765.01.T01 MTR_5g094430 43.182 88 46 2 152 236 51 137 8.65e-14 70.5
MsG0380016765.01.T01 MTR_5g094430 60.526 76 30 0 148 223 233 308 7.50e-30 115
MsG0380016765.01.T01 MTR_5g094430 43.182 88 46 2 152 236 73 159 8.17e-14 70.5
MsG0380016765.01.T01 MTR_5g094430 60.526 76 30 0 148 223 345 420 1.04e-29 116
MsG0380016765.01.T01 MTR_5g094430 43.182 88 46 2 152 236 185 271 1.01e-13 70.5
MsG0380016765.01.T01 MTR_3g056100 60.526 76 30 0 148 223 239 314 3.48e-29 114
MsG0380016765.01.T01 MTR_3g056100 56.140 57 24 1 167 223 99 154 2.46e-14 72.0
MsG0380016765.01.T01 MTR_7g109800 53.846 104 42 3 124 223 100 201 4.13e-29 111
MsG0380016765.01.T01 MTR_3g056100 60.526 76 30 0 148 223 383 458 4.40e-29 115
MsG0380016765.01.T01 MTR_3g056100 56.140 57 24 1 167 223 243 298 1.48e-14 72.8
MsG0380016765.01.T01 MTR_3g009470 49.558 113 44 1 124 223 439 551 4.59e-29 115
MsG0380016765.01.T01 MTR_3g009470 56.140 57 24 1 167 223 280 335 1.08e-14 73.6
MsG0380016765.01.T01 MTR_3g056100 60.526 76 30 0 148 223 396 471 4.74e-29 115
MsG0380016765.01.T01 MTR_3g056100 56.140 57 24 1 167 223 243 298 1.56e-14 72.8
MsG0380016765.01.T01 MTR_7g011820 61.039 77 30 0 147 223 390 466 4.98e-29 114
MsG0380016765.01.T01 MTR_7g011820 59.649 57 22 1 167 223 228 283 5.29e-16 77.0
MsG0380016765.01.T01 MTR_3g056100 60.526 76 30 0 148 223 252 327 5.06e-29 114
MsG0380016765.01.T01 MTR_3g056100 56.140 57 24 1 167 223 99 154 2.69e-14 72.0
MsG0380016765.01.T01 MTR_5g042920 61.842 76 29 0 148 223 301 376 5.15e-29 113
MsG0380016765.01.T01 MTR_5g042920 49.367 79 34 3 167 241 151 227 5.11e-15 73.9
MsG0380016765.01.T01 MTR_4g013260 44.928 138 59 3 97 223 261 392 1.13e-28 113
MsG0380016765.01.T01 MTR_4g013260 52.632 57 27 0 167 223 184 240 5.28e-15 74.3
MsG0380016765.01.T01 MTR_5g091390 66.197 71 24 0 153 223 143 213 1.60e-28 110
MsG0380016765.01.T01 MTR_4g122530 67.123 73 24 0 151 223 192 264 2.19e-28 111
MsG0380016765.01.T01 MTR_4g082580 59.211 76 31 0 148 223 259 334 5.02e-28 110
MsG0380016765.01.T01 MTR_4g082580 54.386 57 26 0 167 223 145 201 1.73e-14 72.4
MsG0380016765.01.T01 MTR_7g028415 63.768 69 25 0 155 223 81 149 8.01e-28 104
MsG0380016765.01.T01 MTR_7g028710 63.768 69 25 0 155 223 81 149 8.01e-28 104
MsG0380016765.01.T01 MTR_7g080000 56.627 83 36 0 141 223 406 488 2.44e-27 110
MsG0380016765.01.T01 MTR_7g080000 52.381 63 29 1 165 227 232 293 1.91e-15 75.5
MsG0380016765.01.T01 MTR_7g080020 55.422 83 37 0 141 223 467 549 5.41e-27 109
MsG0380016765.01.T01 MTR_7g080020 55.172 58 25 1 167 224 280 336 1.34e-15 76.3
MsG0380016765.01.T01 MTR_7g071120 59.211 76 31 0 148 223 305 380 1.39e-26 107
MsG0380016765.01.T01 MTR_7g071120 50.000 76 35 2 167 240 166 240 8.80e-15 73.6
MsG0380016765.01.T01 MTR_1g015140 58.442 77 31 1 147 223 83 158 1.71e-26 101
MsG0380016765.01.T01 MTR_8g096730 45.918 98 51 2 145 242 48 143 7.84e-26 99.0
MsG0380016765.01.T01 MTR_1g077780 48.936 94 48 0 148 241 43 136 2.45e-25 97.4
MsG0380016765.01.T01 MTR_3g095040 57.895 76 31 1 153 227 104 179 5.19e-25 98.6
MsG0380016765.01.T01 MTR_7g100510 56.944 72 31 0 152 223 346 417 1.22e-23 99.0
MsG0380016765.01.T01 MTR_7g100510 57.143 56 23 1 168 223 190 244 1.93e-14 72.4
MsG0380016765.01.T01 MTR_8g092010 42.424 99 51 1 131 223 66 164 3.38e-22 90.5
MsG0380016765.01.T01 MTR_1g078260 47.727 88 45 1 154 240 234 321 1.14e-21 93.6
MsG0380016765.01.T01 MTR_7g062220 45.361 97 52 1 128 223 84 180 2.97e-21 90.9
MsG0380016765.01.T01 MTR_5g097490 51.351 74 36 0 152 225 237 310 7.08e-21 90.5
MsG0380016765.01.T01 MTR_1g009613 36.735 147 74 4 86 231 199 327 1.86e-20 89.0
MsG0380016765.01.T01 MTR_2g088000 46.067 89 46 2 150 236 332 420 2.10e-19 87.0
MsG0380016765.01.T01 MTR_4g130900 49.315 73 37 0 151 223 343 415 2.49e-19 86.7
MsG0380016765.01.T01 MTR_6g086555 48.611 72 36 1 153 223 192 263 4.43e-19 85.9
MsG0380016765.01.T01 MTR_4g107970 47.368 76 39 1 150 224 161 236 4.68e-19 86.3
MsG0380016765.01.T01 MTR_4g107970 47.368 76 39 1 150 224 238 313 5.27e-19 85.9
MsG0380016765.01.T01 MTR_4g132430 48.000 75 38 1 150 223 110 184 1.10e-18 84.3
MsG0380016765.01.T01 MTR_4g132430 48.000 75 38 1 150 223 244 318 2.85e-18 83.6
MsG0380016765.01.T01 MTR_4g094908 45.455 88 44 2 140 226 242 326 3.60e-18 82.4
MsG0380016765.01.T01 MTR_3g108960 46.988 83 40 3 142 223 292 371 3.61e-18 83.2
MsG0380016765.01.T01 MTR_5g016610 45.455 88 44 2 140 226 175 259 4.19e-18 81.3
MsG0380016765.01.T01 MTR_3g053330 44.737 76 41 1 150 224 234 309 4.62e-18 83.2
MsG0380016765.01.T01 MTR_2g023930 46.667 75 39 1 150 223 288 362 4.66e-18 83.2
MsG0380016765.01.T01 MTR_7g110720 47.297 74 38 1 151 223 200 273 8.15e-18 82.0
MsG0380016765.01.T01 MTR_7g110720 47.297 74 38 1 151 223 173 246 8.60e-18 82.0
MsG0380016765.01.T01 MTR_2g105060 46.154 78 39 2 149 223 74 151 1.05e-17 79.7
MsG0380016765.01.T01 MTR_2g105060 46.154 78 39 2 149 223 149 226 1.35e-17 80.5
MsG0380016765.01.T01 MTR_4g127040 37.500 112 55 4 114 224 206 303 1.74e-16 77.4
MsG0380016765.01.T01 MTR_7g009730 47.887 71 36 1 154 223 206 276 2.07e-16 78.6
MsG0380016765.01.T01 MTR_4g049790 45.882 85 44 2 154 236 299 383 2.63e-16 78.2
MsG0380016765.01.T01 MTR_2g045360 34.014 147 87 4 99 242 150 289 5.15e-16 77.0
MsG0380016765.01.T01 MTR_1g013760 52.632 57 26 1 168 223 141 197 5.33e-16 75.9
MsG0380016765.01.T01 MTR_0117s0040 51.613 62 29 1 163 223 70 131 1.06e-15 74.3
MsG0380016765.01.T01 MTR_4g094412 44.595 74 40 1 151 223 218 291 1.30e-15 75.9
MsG0380016765.01.T01 MTR_4g094412 44.595 74 40 1 151 223 227 300 1.32e-15 75.9
MsG0380016765.01.T01 MTR_3g106060 50.000 60 29 1 166 224 137 196 1.33e-15 74.7
MsG0380016765.01.T01 MTR_1g070455 40.476 84 46 2 142 224 271 351 1.63e-15 75.1
MsG0380016765.01.T01 MTR_1g013790 44.615 65 35 1 165 228 99 163 2.37e-15 73.6
MsG0380016765.01.T01 MTR_8g028565 37.500 120 63 6 124 239 120 231 5.88e-15 73.6
MsG0380016765.01.T01 MTR_3g031220 47.887 71 32 2 157 223 184 253 6.72e-15 73.6
MsG0380016765.01.T01 MTR_3g031220 66.667 42 14 0 146 187 344 385 2.38e-13 68.9
MsG0380016765.01.T01 MTR_4g007060 43.478 69 38 1 165 232 126 194 9.55e-15 72.4
MsG0380016765.01.T01 MTR_8g099350 53.125 64 27 1 167 227 132 195 1.18e-14 72.8
MsG0380016765.01.T01 MTR_4g007060 43.478 69 38 1 165 232 160 228 1.28e-14 72.4
MsG0380016765.01.T01 MTR_3g009470 56.140 57 24 1 167 223 280 335 1.35e-14 73.2
MsG0380016765.01.T01 MTR_3g009470 45.455 77 29 1 124 187 439 515 4.93e-13 68.6
MsG0380016765.01.T01 MTR_3g090860 53.333 60 25 1 166 222 132 191 1.48e-14 72.4
MsG0380016765.01.T01 MTR_5g067680 53.448 58 24 1 167 221 202 259 2.98e-14 71.6
MsG0380016765.01.T01 MTR_5g097500 43.243 74 42 0 152 225 215 288 5.17e-14 70.5
MsG0380016765.01.T01 MTR_7g117200 40.196 102 50 3 125 222 82 176 1.31e-13 69.3
MsG0380016765.01.T01 MTR_2g075750 45.902 61 30 1 165 222 26 86 1.45e-13 67.4
MsG0380016765.01.T01 MTR_4g049760 39.130 92 54 2 154 243 277 368 2.02e-13 69.7
MsG0380016765.01.T01 MTR_5g074200 43.836 73 39 2 167 238 220 291 2.39e-13 68.9
MsG0380016765.01.T01 MTR_7g073430 50.847 59 26 1 167 222 122 180 2.81e-13 68.2
MsG0380016765.01.T01 MTR_2g075610 46.667 60 29 1 165 221 27 86 4.85e-13 65.9
MsG0380016765.01.T01 MTR_2g075700 50.820 61 27 1 165 222 142 202 5.32e-13 67.8
MsG0380016765.01.T01 MTR_2g075680 39.362 94 51 3 132 222 116 206 6.85e-13 67.4
MsG0380016765.01.T01 MTR_8g087000 48.276 58 29 1 168 224 78 135 1.02e-12 66.2
MsG0380016765.01.T01 MTR_8g087000 48.276 58 29 1 168 224 77 134 1.11e-12 65.9
MsG0380016765.01.T01 MTR_5g029850 67.500 40 13 0 144 183 28 67 1.30e-12 62.0
MsG0380016765.01.T01 MTR_2g032030 32.673 101 60 2 131 223 224 324 1.82e-12 66.6
MsG0380016765.01.T01 MTR_2g024350 42.424 66 37 1 160 224 1 66 2.18e-12 65.1
MsG0380016765.01.T01 MTR_2g032030 32.673 101 60 2 131 223 224 324 2.37e-12 66.2
MsG0380016765.01.T01 MTR_2g016770 38.372 86 47 3 144 224 1 85 2.45e-12 64.3
MsG0380016765.01.T01 MTR_8g098945 46.667 60 31 1 165 223 127 186 2.47e-12 65.5
MsG0380016765.01.T01 MTR_2g016770 46.552 58 30 1 168 224 36 93 2.51e-12 64.7
MsG0380016765.01.T01 MTR_8g005750 38.372 86 49 2 145 227 82 166 5.24e-12 64.3
MsG0380016765.01.T01 MTR_2g024380 41.429 70 38 2 156 224 242 309 6.30e-12 65.1
MsG0380016765.01.T01 MTR_7g073380 40.000 85 47 2 141 222 98 181 6.65e-12 64.3
MsG0380016765.01.T01 MTR_7g079040 46.053 76 37 3 168 239 155 230 6.81e-12 64.7
MsG0380016765.01.T01 MTR_7g109600 49.123 57 28 1 168 223 54 110 9.18e-12 63.5
MsG0380016765.01.T01 MTR_8g027860 41.096 73 40 1 166 235 135 207 9.94e-12 64.3
MsG0380016765.01.T01 MTR_0002s1250 44.068 59 30 1 167 222 111 169 2.06e-11 62.8
MsG0380016765.01.T01 MTR_2g083870 46.552 58 30 1 168 224 81 138 5.28e-11 61.6
MsG0380016765.01.T01 MTR_8g067635 36.047 86 53 2 140 223 321 406 5.47e-11 62.4
MsG0380016765.01.T01 MTR_1g099600 36.709 79 48 2 147 224 166 243 5.57e-11 61.6
MsG0380016765.01.T01 MTR_8g067650 37.363 91 54 3 140 227 311 401 7.76e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380016765.01.T01 AT4G39410 70.896 134 23 3 126 243 171 304 5.97e-62 196
MsG0380016765.01.T01 AT2G44745 82.558 86 15 0 143 228 121 206 5.91e-48 158
MsG0380016765.01.T01 AT1G69310 63.218 87 31 1 137 223 118 203 1.28e-34 125
MsG0380016765.01.T01 AT1G69310 63.218 87 31 1 137 223 118 203 1.28e-34 125
MsG0380016765.01.T01 AT1G69310 63.218 87 31 1 137 223 118 203 1.28e-34 125
MsG0380016765.01.T01 AT5G41570 57.843 102 39 2 131 232 65 162 8.54e-33 117
MsG0380016765.01.T01 AT1G64000 62.222 90 33 1 143 232 90 178 1.23e-32 118
MsG0380016765.01.T01 AT2G46130 59.770 87 34 1 148 234 11 96 5.12e-32 113
MsG0380016765.01.T01 AT5G49520 68.493 73 23 0 151 223 205 277 1.07e-30 117
MsG0380016765.01.T01 AT5G07100 51.923 104 44 1 120 223 100 197 1.33e-30 113
MsG0380016765.01.T01 AT5G07100 47.826 69 36 0 155 223 12 80 9.63e-15 71.2
MsG0380016765.01.T01 AT5G07100 51.923 104 44 1 120 223 100 197 1.33e-30 113
MsG0380016765.01.T01 AT5G07100 47.826 69 36 0 155 223 12 80 9.63e-15 71.2
MsG0380016765.01.T01 AT5G07100 51.923 104 44 1 120 223 100 197 1.33e-30 113
MsG0380016765.01.T01 AT5G07100 47.826 69 36 0 155 223 12 80 9.63e-15 71.2
MsG0380016765.01.T01 AT5G07100 51.923 104 44 1 120 223 100 197 1.33e-30 113
MsG0380016765.01.T01 AT5G07100 47.826 69 36 0 155 223 12 80 9.63e-15 71.2
MsG0380016765.01.T01 AT4G18170 59.375 96 37 2 133 227 139 233 1.53e-30 115
MsG0380016765.01.T01 AT5G07100 51.923 104 44 1 120 223 193 290 2.21e-30 115
MsG0380016765.01.T01 AT5G07100 47.826 69 36 0 155 223 105 173 1.04e-14 72.4
MsG0380016765.01.T01 AT5G26170 66.216 74 25 0 154 227 100 173 2.91e-30 111
MsG0380016765.01.T01 AT4G26640 53.846 91 35 1 140 223 171 261 2.48e-29 113
MsG0380016765.01.T01 AT4G26640 54.237 59 26 1 165 223 33 90 8.07e-14 70.5
MsG0380016765.01.T01 AT4G26640 53.846 91 35 1 140 223 171 261 2.48e-29 113
MsG0380016765.01.T01 AT4G26640 54.237 59 26 1 165 223 33 90 8.07e-14 70.5
MsG0380016765.01.T01 AT4G26640 53.846 91 35 1 140 223 171 261 2.48e-29 113
MsG0380016765.01.T01 AT4G26640 54.237 59 26 1 165 223 33 90 8.07e-14 70.5
MsG0380016765.01.T01 AT4G26640 53.846 91 35 1 140 223 171 261 2.48e-29 113
MsG0380016765.01.T01 AT4G26640 54.237 59 26 1 165 223 33 90 8.07e-14 70.5
MsG0380016765.01.T01 AT1G13960 63.158 76 28 0 148 223 237 312 2.73e-29 113
MsG0380016765.01.T01 AT1G13960 55.932 59 25 1 167 225 76 133 9.39e-15 73.2
MsG0380016765.01.T01 AT1G13960 63.158 76 28 0 148 223 390 465 3.04e-29 115
MsG0380016765.01.T01 AT1G13960 55.932 59 25 1 167 225 229 286 3.04e-15 75.1
MsG0380016765.01.T01 AT2G03340 63.158 76 28 0 148 223 396 471 3.30e-29 115
MsG0380016765.01.T01 AT2G03340 56.140 57 24 1 167 223 250 305 6.85e-14 70.9
MsG0380016765.01.T01 AT4G26640 53.846 91 35 1 140 223 307 397 3.49e-29 115
MsG0380016765.01.T01 AT4G26640 54.237 59 26 1 165 223 169 226 4.85e-14 71.6
MsG0380016765.01.T01 AT4G26640 53.846 91 35 1 140 223 275 365 4.17e-29 114
MsG0380016765.01.T01 AT4G26640 54.237 59 26 1 165 223 137 194 6.00e-14 71.2
MsG0380016765.01.T01 AT4G26640 53.846 91 35 1 140 223 347 437 5.15e-29 114
MsG0380016765.01.T01 AT4G26640 54.237 59 26 1 165 223 209 266 5.36e-14 71.2
MsG0380016765.01.T01 AT1G29860 65.753 73 25 0 151 223 120 192 5.24e-29 110
MsG0380016765.01.T01 AT1G69310 58.621 87 31 2 137 223 118 199 5.76e-29 110
MsG0380016765.01.T01 AT2G47260 61.176 85 32 1 139 223 147 230 6.45e-29 111
MsG0380016765.01.T01 AT3G01080 55.435 92 37 1 136 223 309 400 8.29e-29 113
MsG0380016765.01.T01 AT3G01080 56.140 57 24 1 167 223 205 260 3.23e-15 74.7
MsG0380016765.01.T01 AT5G56270 63.158 76 28 0 148 223 468 543 1.01e-28 114
MsG0380016765.01.T01 AT5G56270 50.769 65 31 1 159 223 265 328 1.97e-15 75.9
MsG0380016765.01.T01 AT5G13080 64.286 70 25 0 154 223 54 123 1.13e-28 106
MsG0380016765.01.T01 AT3G01080 55.435 92 37 1 136 223 271 362 1.36e-28 112
MsG0380016765.01.T01 AT3G01080 56.140 57 24 1 167 223 167 222 6.20e-15 73.9
MsG0380016765.01.T01 AT2G38470 63.158 76 28 0 148 223 343 418 1.69e-28 113
MsG0380016765.01.T01 AT2G38470 54.386 57 25 1 167 223 184 239 1.62e-13 70.1
MsG0380016765.01.T01 AT2G30250 58.824 85 35 0 148 232 309 393 5.01e-28 110
MsG0380016765.01.T01 AT2G30250 47.222 72 36 2 167 238 166 235 2.08e-12 66.2
MsG0380016765.01.T01 AT5G46350 64.789 71 25 0 153 223 169 239 3.18e-27 107
MsG0380016765.01.T01 AT4G26440 59.211 76 31 0 148 223 353 428 6.52e-27 108
MsG0380016765.01.T01 AT4G26440 30.698 215 97 7 21 224 61 234 1.93e-16 78.6
MsG0380016765.01.T01 AT3G01970 53.409 88 38 1 154 238 52 139 8.09e-27 101
MsG0380016765.01.T01 AT2G46130 55.172 87 34 2 148 234 11 92 1.59e-26 99.4
MsG0380016765.01.T01 AT3G62340 59.036 83 32 1 141 223 94 174 6.92e-25 99.8
MsG0380016765.01.T01 AT5G64810 58.571 70 29 0 154 223 97 166 7.42e-25 97.8
MsG0380016765.01.T01 AT2G37260 62.903 62 23 0 162 223 262 323 4.99e-23 96.3
MsG0380016765.01.T01 AT2G37260 49.333 75 36 2 168 241 84 157 1.06e-13 70.1
MsG0380016765.01.T01 AT2G37260 62.903 62 23 0 162 223 264 325 5.22e-23 96.3
MsG0380016765.01.T01 AT2G37260 49.333 75 36 2 168 241 86 159 1.08e-13 70.1
MsG0380016765.01.T01 AT2G37260 65.000 60 21 0 164 223 346 405 9.38e-23 96.3
MsG0380016765.01.T01 AT2G37260 49.333 75 36 2 168 241 166 239 9.34e-14 70.5
MsG0380016765.01.T01 AT2G04880 42.202 109 50 2 123 223 236 339 1.06e-21 93.6
MsG0380016765.01.T01 AT2G04880 55.932 59 25 1 165 223 109 166 2.67e-14 72.0
MsG0380016765.01.T01 AT5G15130 40.800 125 51 4 105 224 137 243 1.38e-21 93.6
MsG0380016765.01.T01 AT2G04880 42.202 109 50 2 123 223 260 363 1.42e-21 93.2
MsG0380016765.01.T01 AT2G04880 55.932 59 25 1 165 223 109 166 2.97e-14 72.0
MsG0380016765.01.T01 AT5G15130 40.800 125 51 4 105 224 179 285 1.60e-21 93.2
MsG0380016765.01.T01 AT1G55600 50.000 80 40 0 144 223 284 363 4.25e-21 92.0
MsG0380016765.01.T01 AT2G21900 46.667 90 42 3 143 226 80 169 2.51e-20 85.9
MsG0380016765.01.T01 AT2G23320 51.136 88 39 3 140 226 216 300 4.63e-19 84.7
MsG0380016765.01.T01 AT4G31550 40.952 105 57 3 140 243 222 322 1.28e-18 83.6
MsG0380016765.01.T01 AT4G31550 40.952 105 57 3 140 243 221 321 1.37e-18 83.6
MsG0380016765.01.T01 AT4G30935 50.000 70 35 0 154 223 318 387 1.78e-18 84.3
MsG0380016765.01.T01 AT4G04450 49.333 75 37 1 150 223 181 255 2.57e-18 83.6
MsG0380016765.01.T01 AT4G04450 49.333 75 37 1 150 223 275 349 6.56e-18 82.8
MsG0380016765.01.T01 AT5G43290 50.704 71 34 1 154 223 100 170 1.14e-17 80.5
MsG0380016765.01.T01 AT1G62300 48.000 75 38 1 150 223 295 369 1.41e-17 82.0
MsG0380016765.01.T01 AT4G22070 48.000 75 38 1 150 223 280 354 1.85e-17 81.6
MsG0380016765.01.T01 AT4G22070 48.000 75 38 1 150 223 280 354 1.85e-17 81.6
MsG0380016765.01.T01 AT4G22070 48.000 75 38 1 150 223 280 354 1.85e-17 81.6
MsG0380016765.01.T01 AT4G22070 48.000 75 38 1 150 223 280 354 1.85e-17 81.6
MsG0380016765.01.T01 AT2G25000 51.667 60 28 1 166 224 102 161 2.31e-17 78.6
MsG0380016765.01.T01 AT2G25000 51.667 60 28 1 166 224 102 161 2.31e-17 78.6
MsG0380016765.01.T01 AT2G25000 50.820 61 29 1 165 224 123 183 3.50e-17 78.6
MsG0380016765.01.T01 AT4G01720 48.649 74 37 1 151 223 223 296 4.52e-17 80.1
MsG0380016765.01.T01 AT4G31800 51.667 60 28 1 165 223 109 168 4.57e-17 78.2
MsG0380016765.01.T01 AT2G25000 51.667 60 28 1 166 224 145 204 5.10e-17 78.6
MsG0380016765.01.T01 AT5G28650 43.023 86 45 2 140 224 238 320 6.12e-17 79.0
MsG0380016765.01.T01 AT2G30590 44.706 85 43 2 140 223 289 370 6.99e-17 79.3
MsG0380016765.01.T01 AT4G31800 51.667 60 28 1 165 223 174 233 7.70e-17 78.6
MsG0380016765.01.T01 AT2G24570 38.938 113 56 3 112 223 200 300 1.71e-16 77.8
MsG0380016765.01.T01 AT1G18860 44.000 75 41 1 150 223 222 296 2.29e-16 78.2
MsG0380016765.01.T01 AT3G04670 41.860 86 46 2 140 224 238 320 4.09e-16 76.6
MsG0380016765.01.T01 AT4G24240 41.860 86 46 2 140 224 257 339 9.07e-16 75.9
MsG0380016765.01.T01 AT3G01080 56.140 57 24 1 167 223 205 260 9.69e-16 75.5
MsG0380016765.01.T01 AT1G68150 38.776 98 56 2 130 223 195 292 1.37e-15 75.5
MsG0380016765.01.T01 AT1G80840 44.828 87 43 4 142 223 117 203 2.27e-15 74.3
MsG0380016765.01.T01 AT4G01250 42.308 78 42 2 147 223 110 185 1.52e-14 72.0
MsG0380016765.01.T01 AT1G69810 43.421 76 41 2 150 223 128 203 5.30e-14 70.9
MsG0380016765.01.T01 AT1G66550 38.776 98 55 2 130 222 69 166 6.80e-14 69.7
MsG0380016765.01.T01 AT1G69810 43.421 76 41 2 150 223 186 261 6.81e-14 70.9
MsG0380016765.01.T01 AT1G29280 38.202 89 44 2 136 223 53 131 1.15e-13 68.9
MsG0380016765.01.T01 AT1G66550 47.458 59 28 1 167 222 103 161 2.28e-13 68.2
MsG0380016765.01.T01 AT3G56400 33.654 104 65 2 135 234 87 190 2.87e-13 68.2
MsG0380016765.01.T01 AT1G66560 47.458 59 28 1 167 222 103 161 3.86e-13 67.4
MsG0380016765.01.T01 AT2G34830 38.202 89 52 3 138 223 184 272 8.36e-13 67.8
MsG0380016765.01.T01 AT2G34830 38.202 89 52 3 138 223 193 281 9.68e-13 67.4
MsG0380016765.01.T01 AT1G66600 40.506 79 43 2 166 241 102 179 1.06e-12 65.9
MsG0380016765.01.T01 AT1G30650 33.333 99 58 2 133 223 176 274 1.72e-12 66.6
MsG0380016765.01.T01 AT5G01900 45.312 64 32 2 161 221 104 167 2.79e-12 65.1
MsG0380016765.01.T01 AT2G40740 50.000 58 26 1 167 221 173 230 2.91e-12 65.5
MsG0380016765.01.T01 AT5G52830 49.123 57 28 1 168 223 166 222 3.00e-12 65.9
MsG0380016765.01.T01 AT4G23550 44.262 61 33 1 164 223 137 197 3.31e-12 65.5
MsG0380016765.01.T01 AT2G40740 50.000 58 26 1 167 221 182 239 3.61e-12 65.1
MsG0380016765.01.T01 AT4G12020 43.478 69 38 1 166 234 467 534 3.65e-12 66.2
MsG0380016765.01.T01 AT4G12020 70.000 40 12 0 148 187 622 661 7.49e-12 65.5
MsG0380016765.01.T01 AT4G12020 43.478 69 38 1 166 234 467 534 3.68e-12 66.2
MsG0380016765.01.T01 AT4G12020 70.000 40 12 0 148 187 622 661 7.41e-12 65.5
MsG0380016765.01.T01 AT4G12020 43.478 69 38 1 166 234 467 534 3.73e-12 66.2
MsG0380016765.01.T01 AT4G12020 70.000 40 12 0 148 187 622 661 7.44e-12 65.5
MsG0380016765.01.T01 AT4G12020 43.478 69 38 1 166 234 467 534 3.73e-12 66.2
MsG0380016765.01.T01 AT4G12020 70.000 40 12 0 148 187 622 661 7.44e-12 65.5
MsG0380016765.01.T01 AT4G12020 43.478 69 38 1 166 234 467 534 3.75e-12 66.2
MsG0380016765.01.T01 AT4G12020 70.000 40 12 0 148 187 622 661 7.84e-12 65.1
MsG0380016765.01.T01 AT4G12020 43.478 69 38 1 166 234 467 534 3.86e-12 66.2
MsG0380016765.01.T01 AT4G12020 70.000 40 12 0 148 187 622 661 7.69e-12 65.5
MsG0380016765.01.T01 AT4G12020 43.478 69 38 1 166 234 467 534 3.95e-12 66.2
MsG0380016765.01.T01 AT4G12020 70.000 40 12 0 148 187 622 661 7.80e-12 65.1
MsG0380016765.01.T01 AT4G12020 43.478 69 38 1 166 234 400 467 3.95e-12 66.2
MsG0380016765.01.T01 AT4G12020 70.000 40 12 0 148 187 555 594 8.58e-12 65.1
MsG0380016765.01.T01 AT4G12020 43.478 69 38 1 166 234 467 534 4.06e-12 66.2
MsG0380016765.01.T01 AT4G12020 70.000 40 12 0 148 187 622 661 7.88e-12 65.1
MsG0380016765.01.T01 AT4G12020 43.478 69 38 1 166 234 467 534 4.06e-12 66.2
MsG0380016765.01.T01 AT4G12020 70.000 40 12 0 148 187 622 661 7.88e-12 65.1
MsG0380016765.01.T01 AT4G12020 43.478 69 38 1 166 234 467 534 5.71e-12 65.5
MsG0380016765.01.T01 AT4G12020 70.000 40 12 0 148 187 622 661 9.90e-12 65.1
MsG0380016765.01.T01 AT1G80590 46.552 58 28 1 168 222 86 143 1.76e-11 62.4
MsG0380016765.01.T01 AT5G45050 35.165 91 58 1 134 223 1008 1098 3.08e-11 63.5
MsG0380016765.01.T01 AT5G22570 46.552 58 28 1 168 222 111 168 3.20e-11 62.4
MsG0380016765.01.T01 AT5G24110 39.759 83 38 2 165 235 111 193 3.42e-11 62.4
MsG0380016765.01.T01 AT5G45050 35.165 91 58 1 134 223 1147 1237 3.46e-11 63.2
MsG0380016765.01.T01 AT5G45050 35.165 91 58 1 134 223 1119 1209 3.65e-11 63.2
MsG0380016765.01.T01 AT2G40750 34.188 117 69 2 120 228 100 216 5.20e-11 62.0

Find 85 sgRNAs with CRISPR-Local

Find 172 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATATTATCTATACCTATTCT+AGG 0.247192 3:-87609350 MsG0380016765.01.T01:three_prime_UTR
AATTAGTGAAAAGTTGAAAA+TGG 0.254141 3:+87609272 None:intergenic
GATCATCTTACTTCTAGTTT+TGG 0.279525 3:-87611331 MsG0380016765.01.T01:CDS
GGTACCACTTCTCCAACTTT+AGG 0.294988 3:-87611695 MsG0380016765.01.T01:five_prime_UTR
TCAGCAAAATTTGCAGCTTC+AGG 0.298513 3:+87611397 None:intergenic
ACTAGCTAGCTACAAGTTAA+TGG 0.299451 3:-87611781 MsG0380016765.01.T01:five_prime_UTR
TATGTGGTTATCACCATTCT+TGG 0.301275 3:+87609580 None:intergenic
GATTCTTCAAGTTCATTTGA+TGG 0.326616 3:+87609535 None:intergenic
AAACATGACCTTACCTCCTT+TGG 0.332541 3:-87611479 MsG0380016765.01.T01:CDS
CTGAACTTACTAATTTCTTC+TGG 0.337305 3:-87609501 MsG0380016765.01.T01:CDS
ACAGATCCAAAGTGAATTCA+TGG 0.376673 3:-87611282 MsG0380016765.01.T01:intron
CTTTGGATCTGTTCAAAGAA+AGG 0.382028 3:+87611293 None:intergenic
ACCAACATATATTTCTCTCT+TGG 0.391421 3:-87609459 MsG0380016765.01.T01:three_prime_UTR
GGTTGTAGATCTAGAGAGTT+GGG 0.396794 3:-87611674 MsG0380016765.01.T01:five_prime_UTR
GTTGGGTAGAGATTATAGAT+TGG 0.397834 3:-87611657 MsG0380016765.01.T01:five_prime_UTR
AATGGGAGGAGCAGATAGAA+AGG 0.414527 3:+87609290 None:intergenic
ATTAGTGAAAAGTTGAAAAT+GGG 0.419690 3:+87609273 None:intergenic
AAAGGAGGTAAGGTCATGTT+TGG 0.420084 3:+87611481 None:intergenic
TCATGAGATCCCTATGCAAA+TGG 0.425861 3:-87611524 MsG0380016765.01.T01:CDS
CCATAGCTTGTTTGATCAAG+AGG 0.452922 3:-87611551 MsG0380016765.01.T01:CDS
TTCTGAAAAGAAAACTCTAT+AGG 0.453642 3:-87611716 MsG0380016765.01.T01:five_prime_UTR
AACATATATTTCTCTCTTGG+AGG 0.453995 3:-87609456 MsG0380016765.01.T01:three_prime_UTR
TATGATTGAATTTAGGGCAT+GGG 0.455045 3:-87610935 MsG0380016765.01.T01:intron
CATCATCATAATCAACAACT+AGG 0.465924 3:-87610856 MsG0380016765.01.T01:CDS
TACCTTTCAAAGATTGATGA+TGG 0.466958 3:+87611449 None:intergenic
TGAAGAAAATGAAGGGAAGA+AGG 0.467112 3:-87610816 MsG0380016765.01.T01:CDS
CATGAGATCCCTATGCAAAT+GGG 0.477999 3:-87611523 MsG0380016765.01.T01:CDS
ATCTCACCATGAATTCACTT+TGG 0.483028 3:+87611276 None:intergenic
GAAGGAAGGTGAGGGAGCCT+AGG 0.492345 3:-87610798 MsG0380016765.01.T01:CDS
CTAGATCTACAACCTAAAGT+TGG 0.495671 3:+87611683 None:intergenic
TATGCATGATTTCCTAGAAT+AGG 0.499233 3:+87609338 None:intergenic
CATAAAGATGAAGAAAATGA+AGG 0.501193 3:-87610824 MsG0380016765.01.T01:CDS
AGAAGTAACTGATAGCTTGA+TGG 0.501267 3:-87610911 MsG0380016765.01.T01:CDS
AAGGTCATGTTTGGAGGGAA+AGG 0.503288 3:+87611490 None:intergenic
ACGTGTGGAGCGGTTGGCTG+AGG 0.504103 3:-87609605 MsG0380016765.01.T01:CDS
TTGAACAGCTGTTGCAAGGA+GGG 0.504686 3:+87611372 None:intergenic
AGCAATGGAAAAGGGAAAGT+TGG 0.504789 3:-87611825 None:intergenic
ATTAAGACTGAATAATTAAG+TGG 0.508809 3:-87609410 MsG0380016765.01.T01:three_prime_UTR
TGAAGGGAAGAAGGAAGGTG+AGG 0.508932 3:-87610807 MsG0380016765.01.T01:CDS
ATCTGTTCAAAGAAAGGAGT+TGG 0.513213 3:+87611299 None:intergenic
CCTCTTGATCAAACAAGCTA+TGG 0.514036 3:+87611551 None:intergenic
GAAGTAACTGATAGCTTGAT+GGG 0.521967 3:-87610910 MsG0380016765.01.T01:CDS
AGCATGTCTTCCTTCATATG+TGG 0.525478 3:+87609564 None:intergenic
GCAATTATCCAAAGGAGGTA+AGG 0.525699 3:+87611471 None:intergenic
GAAAATGAAGGGAAGAAGGA+AGG 0.526149 3:-87610812 MsG0380016765.01.T01:CDS
ATGATTGAATTTAGGGCATG+GGG 0.530214 3:-87610934 MsG0380016765.01.T01:intron
GAAGGGAAGAAGGAAGGTGA+GGG 0.532669 3:-87610806 MsG0380016765.01.T01:CDS
AGGTTGTAGATCTAGAGAGT+TGG 0.538572 3:-87611675 MsG0380016765.01.T01:five_prime_UTR
TCTCCTTCTCTATATAACCT+TGG 0.538852 3:+87611630 None:intergenic
GGAGGTAAGGTCATGTTTGG+AGG 0.539020 3:+87611484 None:intergenic
GGTTACAAGTGGAGGAAGTA+CGG 0.540793 3:-87610733 MsG0380016765.01.T01:CDS
GACTGAATAATTAAGTGGTG+TGG 0.542090 3:-87609405 MsG0380016765.01.T01:three_prime_UTR
ATCATCATAATCAACAACTA+GGG 0.543445 3:-87610855 MsG0380016765.01.T01:CDS
TGCCATCATCAATCTTTGAA+AGG 0.544773 3:-87611451 MsG0380016765.01.T01:CDS
TATTGAACCCCATTTGCATA+GGG 0.544992 3:+87611515 None:intergenic
ATATTGAACCCCATTTGCAT+AGG 0.547777 3:+87611514 None:intergenic
ATGGTGATAACCACATATGA+AGG 0.551016 3:-87609574 MsG0380016765.01.T01:CDS
AAAGAAACGTGTGGAGCGGT+TGG 0.558270 3:-87609611 MsG0380016765.01.T01:CDS
GATTATAGATTGGATTGCCA+AGG 0.559310 3:-87611647 MsG0380016765.01.T01:five_prime_UTR
GCTTCAGGAGAAAGTGATGA+AGG 0.566189 3:+87611412 None:intergenic
GACGTGGATGTGTTGGATGA+TGG 0.572793 3:-87610754 MsG0380016765.01.T01:CDS
CATGAGCGACGTGGATGTGT+TGG 0.578149 3:-87610761 MsG0380016765.01.T01:CDS
GAGGTAAGGTCATGTTTGGA+GGG 0.578786 3:+87611485 None:intergenic
GAGGAAGTACGGACAGAAAG+TGG 0.580020 3:-87610722 MsG0380016765.01.T01:CDS
TCCAAGAGAGAAATATATGT+TGG 0.580358 3:+87609458 None:intergenic
ATAAAGATGAAGAAAATGAA+GGG 0.586041 3:-87610823 MsG0380016765.01.T01:CDS
ACAACCTAAAGTTGGAGAAG+TGG 0.587621 3:+87611691 None:intergenic
GTTGGCTGAGGATCCAAGAA+TGG 0.588263 3:-87609593 MsG0380016765.01.T01:CDS
TAAAGAACACACAGCATCCA+AGG 0.591239 3:-87610699 MsG0380016765.01.T01:intron
TTGCCAAGGTTATATAGAGA+AGG 0.592512 3:-87611633 MsG0380016765.01.T01:five_prime_UTR
CAACACATCCACGTCGCTCA+TGG 0.593426 3:+87610762 None:intergenic
AGATGATCTTCAAATTCTCG+TGG 0.612771 3:+87611346 None:intergenic
AGTGAAAAGTTGAAAATGGG+AGG 0.612976 3:+87609276 None:intergenic
GACAATTATCTTGTGTGCAA+CGG 0.619219 3:+87609638 None:intergenic
CTTCAAGACCATGAGCGACG+TGG 0.626402 3:-87610770 MsG0380016765.01.T01:CDS
TGGATGATGGTTACAAGTGG+AGG 0.635586 3:-87610741 MsG0380016765.01.T01:CDS
ATGAGATCCCTATGCAAATG+GGG 0.638441 3:-87611522 MsG0380016765.01.T01:CDS
TGATGATGGCAATTATCCAA+AGG 0.643521 3:+87611463 None:intergenic
ATGGTCTTGAAGCAAAACCT+AGG 0.654328 3:+87610781 None:intergenic
TTGTCGAGTAAAGAAACGTG+TGG 0.654452 3:-87609620 MsG0380016765.01.T01:CDS
TCATCATAATCAACAACTAG+GGG 0.662114 3:-87610854 MsG0380016765.01.T01:CDS
TGTTGGATGATGGTTACAAG+TGG 0.666245 3:-87610744 MsG0380016765.01.T01:CDS
TTTGAACAGCTGTTGCAAGG+AGG 0.670990 3:+87611371 None:intergenic
TGATGGCAATTATCCAAAGG+AGG 0.672690 3:+87611466 None:intergenic
GAGTAAAGAAACGTGTGGAG+CGG 0.683085 3:-87609615 MsG0380016765.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAATAAATCTTAACATTTT+GGG + Chr3:87610721-87610740 None:intergenic 10.0%
!!! ATTTGCTTATATTTTTTTAA+GGG - Chr3:87609945-87609964 MsG0380016765.01.T01:intron 10.0%
!!! GTTTATTAGAATTTTATATT+TGG - Chr3:87610381-87610400 MsG0380016765.01.T01:intron 10.0%
!!! TAAAATAAATCTTAACATTT+TGG + Chr3:87610722-87610741 None:intergenic 10.0%
!!! TATTTGCTTATATTTTTTTA+AGG - Chr3:87609944-87609963 MsG0380016765.01.T01:intron 10.0%
!! ATTTACCTATCAAAAAATAT+AGG - Chr3:87609907-87609926 MsG0380016765.01.T01:intron 15.0%
!!! TAACATTATTGTTTTTTTAG+AGG + Chr3:87611795-87611814 None:intergenic 15.0%
!!! TTTGCTTATATTTTTTTAAG+GGG - Chr3:87609946-87609965 MsG0380016765.01.T01:intron 15.0%
!! AATTAGTGAAAAGTTGAAAA+TGG + Chr3:87611701-87611720 None:intergenic 20.0%
!! ATAAAGATGAAGAAAATGAA+GGG - Chr3:87610147-87610166 MsG0380016765.01.T01:intron 20.0%
!! ATATTATCTATACCTATTCT+AGG - Chr3:87611620-87611639 MsG0380016765.01.T01:five_prime_UTR 20.0%
!! ATTAAGACTGAATAATTAAG+TGG - Chr3:87611560-87611579 MsG0380016765.01.T01:CDS 20.0%
!! ATTAGTGAAAAGTTGAAAAT+GGG + Chr3:87611700-87611719 None:intergenic 20.0%
!! CAAAGATATGTTATATATGT+AGG - Chr3:87609819-87609838 MsG0380016765.01.T01:intron 20.0%
!! GTGGAATATTTGAAAATTTA+AGG + Chr3:87609727-87609746 None:intergenic 20.0%
!! TTCTAATAAACAATAATGAG+AGG + Chr3:87610372-87610391 None:intergenic 20.0%
!!! ATTTGCCTATATTTTTTGAT+AGG + Chr3:87609915-87609934 None:intergenic 20.0%
!!! TATAGTACTATTTTCCTTTT+TGG + Chr3:87611257-87611276 None:intergenic 20.0%
!!! TATTTGGCTTATGATTATTT+TGG - Chr3:87610397-87610416 MsG0380016765.01.T01:intron 20.0%
!!! TTTGTTAAGTTTTCATTTGA+GGG + Chr3:87610867-87610886 None:intergenic 20.0%
!!! TTTTGTTAAGTTTTCATTTG+AGG + Chr3:87610868-87610887 None:intergenic 20.0%
! AAAAGAGAGAAAATTTGAAG+TGG + Chr3:87610312-87610331 None:intergenic 25.0%
! AAACTTAACTCTCTTTACAA+AGG + Chr3:87610005-87610024 None:intergenic 25.0%
! AAGTAAAAACCATCATTACT+AGG + Chr3:87611134-87611153 None:intergenic 25.0%
! ATCATCATAATCAACAACTA+GGG - Chr3:87610115-87610134 MsG0380016765.01.T01:intron 25.0%
! CATAAAGATGAAGAAAATGA+AGG - Chr3:87610146-87610165 MsG0380016765.01.T01:intron 25.0%
! GGTTATACTCTAACATATAT+AGG + Chr3:87610607-87610626 None:intergenic 25.0%
! GTACAGCATAAATAAAAAAC+AGG + Chr3:87611159-87611178 None:intergenic 25.0%
! GTATTAAGGACAAAGAAAAT+GGG + Chr3:87611194-87611213 None:intergenic 25.0%
! GTTGGATATGATTGAATTTA+GGG - Chr3:87610029-87610048 MsG0380016765.01.T01:intron 25.0%
! GTTTGTGATTAATATGTAAG+TGG + Chr3:87609886-87609905 None:intergenic 25.0%
! TAATAAACAATAATGAGAGG+AGG + Chr3:87610369-87610388 None:intergenic 25.0%
! TAATACCTTCCTATATAACT+TGG - Chr3:87611208-87611227 MsG0380016765.01.T01:intron 25.0%
!! CTTCATTTTCTTCATCTTTA+TGG + Chr3:87610148-87610167 None:intergenic 25.0%
!! TTCTGAAAAGAAAACTCTAT+AGG - Chr3:87609254-87609273 MsG0380016765.01.T01:three_prime_UTR 25.0%
!! TTGTTAAGTTTTCATTTGAG+GGG + Chr3:87610866-87610885 None:intergenic 25.0%
!!! AGTTATATAGGAAGGTATTA+AGG + Chr3:87611208-87611227 None:intergenic 25.0%
!!! TTTACTTTTAGAACAAGTCT+TGG - Chr3:87611743-87611762 MsG0380016765.01.T01:five_prime_UTR 25.0%
AAATATAGATACTAGCTGTC+TGG - Chr3:87609781-87609800 MsG0380016765.01.T01:intron 30.0%
AACATATATTTCTCTCTTGG+AGG - Chr3:87611514-87611533 MsG0380016765.01.T01:CDS 30.0%
AACATTTGCTTGAATTTGTG+TGG - Chr3:87610991-87611010 MsG0380016765.01.T01:intron 30.0%
ACATTTGCTTGAATTTGTGT+GGG - Chr3:87610992-87611011 MsG0380016765.01.T01:intron 30.0%
ACCAACATATATTTCTCTCT+TGG - Chr3:87611511-87611530 MsG0380016765.01.T01:CDS 30.0%
AGATTTCACTATATGTCTTC+TGG - Chr3:87610465-87610484 MsG0380016765.01.T01:intron 30.0%
CATCATCATAATCAACAACT+AGG - Chr3:87610114-87610133 MsG0380016765.01.T01:intron 30.0%
CTGAACTTACTAATTTCTTC+TGG - Chr3:87611469-87611488 MsG0380016765.01.T01:CDS 30.0%
CTGTGTAATCCAAGTTATAT+AGG + Chr3:87611220-87611239 None:intergenic 30.0%
GATTTCACTATATGTCTTCT+GGG - Chr3:87610466-87610485 MsG0380016765.01.T01:intron 30.0%
GGTATTAAGGACAAAGAAAA+TGG + Chr3:87611195-87611214 None:intergenic 30.0%
GGTTGGATATGATTGAATTT+AGG - Chr3:87610028-87610047 MsG0380016765.01.T01:intron 30.0%
GTAATCCAAGTTATATAGGA+AGG + Chr3:87611216-87611235 None:intergenic 30.0%
TACCTTTCAAAGATTGATGA+TGG + Chr3:87609524-87609543 None:intergenic 30.0%
TATATACTGAATGAGTGCAA+AGG + Chr3:87610648-87610667 None:intergenic 30.0%
TATGCATGATTTCCTAGAAT+AGG + Chr3:87611635-87611654 None:intergenic 30.0%
TATGCGTAATGTTGAAAGTT+AGG - Chr3:87610539-87610558 MsG0380016765.01.T01:intron 30.0%
TATGTACTTTAGCACCAAAA+AGG - Chr3:87611240-87611259 MsG0380016765.01.T01:intron 30.0%
TCATCATAATCAACAACTAG+GGG - Chr3:87610116-87610135 MsG0380016765.01.T01:intron 30.0%
TCCAAGAGAGAAATATATGT+TGG + Chr3:87611515-87611534 None:intergenic 30.0%
! AGAGTCCTAATTTTCAACAT+CGG + Chr3:87610508-87610527 None:intergenic 30.0%
! ATATGATTGAATTTAGGGCA+TGG - Chr3:87610034-87610053 MsG0380016765.01.T01:intron 30.0%
! GATTCTTCAAGTTCATTTGA+TGG + Chr3:87611438-87611457 None:intergenic 30.0%
! GTAAAGAGAGTTAAGTTTTG+TGG - Chr3:87610007-87610026 MsG0380016765.01.T01:intron 30.0%
! TATGATTGAATTTAGGGCAT+GGG - Chr3:87610035-87610054 MsG0380016765.01.T01:intron 30.0%
! TGTTAAGTTTTCATTTGAGG+GGG + Chr3:87610865-87610884 None:intergenic 30.0%
!! AGTAAGAAGTGTCATATTGT+TGG + Chr3:87610952-87610971 None:intergenic 30.0%
!!! GAGAGTTTGTTTTTGAACTT+TGG + Chr3:87609226-87609245 None:intergenic 30.0%
!!! GATCATCTTACTTCTAGTTT+TGG - Chr3:87609639-87609658 MsG0380016765.01.T01:CDS 30.0%
!!! GATTATTTTGGTGCTTAAGA+GGG - Chr3:87610409-87610428 MsG0380016765.01.T01:intron 30.0%
!!! TGATTATTTTGGTGCTTAAG+AGG - Chr3:87610408-87610427 MsG0380016765.01.T01:intron 30.0%
!!! TTGTTTTTGAACTTTGGTTG+AGG + Chr3:87609220-87609239 None:intergenic 30.0%
AACCATCATTACTAGGAGAA+AGG + Chr3:87611127-87611146 None:intergenic 35.0%
ACAGATCCAAAGTGAATTCA+TGG - Chr3:87609688-87609707 MsG0380016765.01.T01:intron 35.0%
ACCATCATTACTAGGAGAAA+GGG + Chr3:87611126-87611145 None:intergenic 35.0%
ACTAGCTAGCTACAAGTTAA+TGG - Chr3:87609189-87609208 MsG0380016765.01.T01:three_prime_UTR 35.0%
AGAAGTAACTGATAGCTTGA+TGG - Chr3:87610059-87610078 MsG0380016765.01.T01:intron 35.0%
AGATGATCTTCAAATTCTCG+TGG + Chr3:87609627-87609646 None:intergenic 35.0%
AGTGAAAAGTTGAAAATGGG+AGG + Chr3:87611697-87611716 None:intergenic 35.0%
ATATTGAACCCCATTTGCAT+AGG + Chr3:87609459-87609478 None:intergenic 35.0%
ATCTCACCATGAATTCACTT+TGG + Chr3:87609697-87609716 None:intergenic 35.0%
ATCTGTTCAAAGAAAGGAGT+TGG + Chr3:87609674-87609693 None:intergenic 35.0%
ATGGTGATAACCACATATGA+AGG - Chr3:87611396-87611415 MsG0380016765.01.T01:CDS 35.0%
CTAGATCTACAACCTAAAGT+TGG + Chr3:87609290-87609309 None:intergenic 35.0%
CTCATAATTCATCCACCTAT+AGG + Chr3:87610814-87610833 None:intergenic 35.0%
CTTTGGATCTGTTCAAAGAA+AGG + Chr3:87609680-87609699 None:intergenic 35.0%
GAAGTAACTGATAGCTTGAT+GGG - Chr3:87610060-87610079 MsG0380016765.01.T01:intron 35.0%
GACAACACTGATAATCATTG+AGG - Chr3:87610431-87610450 MsG0380016765.01.T01:intron 35.0%
GACAATTATCTTGTGTGCAA+CGG + Chr3:87611335-87611354 None:intergenic 35.0%
GACTGAATAATTAAGTGGTG+TGG - Chr3:87611565-87611584 MsG0380016765.01.T01:CDS 35.0%
GATTATAGATTGGATTGCCA+AGG - Chr3:87609323-87609342 MsG0380016765.01.T01:three_prime_UTR 35.0%
GGAGATAATGAATACTACCT+TGG + Chr3:87610291-87610310 None:intergenic 35.0%
GTTGGGTAGAGATTATAGAT+TGG - Chr3:87609313-87609332 MsG0380016765.01.T01:three_prime_UTR 35.0%
GTTTGCCGATGTTGAAAATT+AGG - Chr3:87610500-87610519 MsG0380016765.01.T01:intron 35.0%
TATGTGGTTATCACCATTCT+TGG + Chr3:87611393-87611412 None:intergenic 35.0%
TATTGAACCCCATTTGCATA+GGG + Chr3:87609458-87609477 None:intergenic 35.0%
TCTCCTTCTCTATATAACCT+TGG + Chr3:87609343-87609362 None:intergenic 35.0%
TGAAGAAAATGAAGGGAAGA+AGG - Chr3:87610154-87610173 MsG0380016765.01.T01:intron 35.0%
TGCCATCATCAATCTTTGAA+AGG - Chr3:87609519-87609538 MsG0380016765.01.T01:CDS 35.0%
TTGATGGGAAAAAGAAGTAG+TGG - Chr3:87610075-87610094 MsG0380016765.01.T01:intron 35.0%
TTGCCAAGGTTATATAGAGA+AGG - Chr3:87609337-87609356 MsG0380016765.01.T01:three_prime_UTR 35.0%
! ACAATTTTGCTTGACGACAT+AGG - Chr3:87610671-87610690 MsG0380016765.01.T01:intron 35.0%
! ATGATTGAATTTAGGGCATG+GGG - Chr3:87610036-87610055 MsG0380016765.01.T01:intron 35.0%
! ATGTATTTTGTGGGTCATGA+GGG - Chr3:87610785-87610804 MsG0380016765.01.T01:CDS 35.0%
! TTGCACGACATGTATTTTGT+GGG - Chr3:87610776-87610795 MsG0380016765.01.T01:CDS 35.0%
! TTTGCACGACATGTATTTTG+TGG - Chr3:87610775-87610794 MsG0380016765.01.T01:CDS 35.0%
!! AGAGAGTTAAGTTTTGTGGT+TGG - Chr3:87610011-87610030 MsG0380016765.01.T01:intron 35.0%
!! TGATGATGGCAATTATCCAA+AGG + Chr3:87609510-87609529 None:intergenic 35.0%
!!! CATCTTACTTCTAGTTTTGG+AGG - Chr3:87609642-87609661 MsG0380016765.01.T01:CDS 35.0%
AAACATGACCTTACCTCCTT+TGG - Chr3:87609491-87609510 MsG0380016765.01.T01:exon 40.0%
AAAGGAGGTAAGGTCATGTT+TGG + Chr3:87609492-87609511 None:intergenic 40.0%
AACGGTAGTAGCTTCTACAA+AGG + Chr3:87611317-87611336 None:intergenic 40.0%
ACAACCTAAAGTTGGAGAAG+TGG + Chr3:87609282-87609301 None:intergenic 40.0%
ACCCTTTCTCCTAGTAATGA+TGG - Chr3:87611122-87611141 MsG0380016765.01.T01:intron 40.0%
AGCATGTCTTCCTTCATATG+TGG + Chr3:87611409-87611428 None:intergenic 40.0%
AGGAGAAACTTCTTGGTACT+TGG + Chr3:87610628-87610647 None:intergenic 40.0%
AGGTTGTAGATCTAGAGAGT+TGG - Chr3:87609295-87609314 MsG0380016765.01.T01:three_prime_UTR 40.0%
AGTGCAAAGGAGAAACTTCT+TGG + Chr3:87610635-87610654 None:intergenic 40.0%
ATGAGATCCCTATGCAAATG+GGG - Chr3:87609448-87609467 MsG0380016765.01.T01:three_prime_UTR 40.0%
ATGGGAAAAAGAAGTAGTGG+AGG - Chr3:87610078-87610097 MsG0380016765.01.T01:intron 40.0%
CATGAGATCCCTATGCAAAT+GGG - Chr3:87609447-87609466 MsG0380016765.01.T01:three_prime_UTR 40.0%
CCTCTTGATCAAACAAGCTA+TGG + Chr3:87609422-87609441 None:intergenic 40.0%
GAAAATGAAGGGAAGAAGGA+AGG - Chr3:87610158-87610177 MsG0380016765.01.T01:intron 40.0%
GCAATTATCCAAAGGAGGTA+AGG + Chr3:87609502-87609521 None:intergenic 40.0%
GGTTGTAGATCTAGAGAGTT+GGG - Chr3:87609296-87609315 MsG0380016765.01.T01:three_prime_UTR 40.0%
TAAAGAACACACAGCATCCA+AGG - Chr3:87610271-87610290 MsG0380016765.01.T01:intron 40.0%
TCAGCAAAATTTGCAGCTTC+AGG + Chr3:87609576-87609595 None:intergenic 40.0%
TCATGAGATCCCTATGCAAA+TGG - Chr3:87609446-87609465 MsG0380016765.01.T01:three_prime_UTR 40.0%
TGATGGCAATTATCCAAAGG+AGG + Chr3:87609507-87609526 None:intergenic 40.0%
TGTGGGAGCTAATAAAAGTG+TGG - Chr3:87611009-87611028 MsG0380016765.01.T01:intron 40.0%
TTGTCGAGTAAAGAAACGTG+TGG - Chr3:87611350-87611369 MsG0380016765.01.T01:CDS 40.0%
! ATGGTCTTGAAGCAAAACCT+AGG + Chr3:87610192-87610211 None:intergenic 40.0%
! CATGTATTTTGTGGGTCATG+AGG - Chr3:87610784-87610803 MsG0380016765.01.T01:CDS 40.0%
! GTGGGAGCTAATAAAAGTGT+GGG - Chr3:87611010-87611029 MsG0380016765.01.T01:intron 40.0%
! GTTTTTGAACAGCTGTTGCA+AGG + Chr3:87609605-87609624 None:intergenic 40.0%
! TGGGAGCTAATAAAAGTGTG+GGG - Chr3:87611011-87611030 MsG0380016765.01.T01:intron 40.0%
! TGTATTTTGTGGGTCATGAG+GGG - Chr3:87610786-87610805 MsG0380016765.01.T01:CDS 40.0%
! TGTTGGATGATGGTTACAAG+TGG - Chr3:87610226-87610245 MsG0380016765.01.T01:intron 40.0%
!! CCATAGCTTGTTTGATCAAG+AGG - Chr3:87609419-87609438 MsG0380016765.01.T01:three_prime_UTR 40.0%
!!! CTTACTTCTAGTTTTGGAGG+AGG - Chr3:87609645-87609664 MsG0380016765.01.T01:CDS 40.0%
AAGGTCATGTTTGGAGGGAA+AGG + Chr3:87609483-87609502 None:intergenic 45.0%
AATGGGAGGAGCAGATAGAA+AGG + Chr3:87611683-87611702 None:intergenic 45.0%
GAGGTAAGGTCATGTTTGGA+GGG + Chr3:87609488-87609507 None:intergenic 45.0%
GAGTAAAGAAACGTGTGGAG+CGG - Chr3:87611355-87611374 MsG0380016765.01.T01:CDS 45.0%
GCTATAGTTCACATGCATGG+TGG + Chr3:87609746-87609765 None:intergenic 45.0%
GCTTCAGGAGAAAGTGATGA+AGG + Chr3:87609561-87609580 None:intergenic 45.0%
GGTACCACTTCTCCAACTTT+AGG - Chr3:87609275-87609294 MsG0380016765.01.T01:three_prime_UTR 45.0%
GGTTACAAGTGGAGGAAGTA+CGG - Chr3:87610237-87610256 MsG0380016765.01.T01:intron 45.0%
GTGGCTATAGTTCACATGCA+TGG + Chr3:87609749-87609768 None:intergenic 45.0%
TTGAACAGCTGTTGCAAGGA+GGG + Chr3:87609601-87609620 None:intergenic 45.0%
TTTGAACAGCTGTTGCAAGG+AGG + Chr3:87609602-87609621 None:intergenic 45.0%
TTTGCTTGACGACATAGGTG+TGG - Chr3:87610676-87610695 MsG0380016765.01.T01:intron 45.0%
! TGGATGATGGTTACAAGTGG+AGG - Chr3:87610229-87610248 MsG0380016765.01.T01:intron 45.0%
!! CTGACACCCATTTTTCTCCT+AGG - Chr3:87611817-87611836 MsG0380016765.01.T01:five_prime_UTR 45.0%
!!! ACTTCTAGTTTTGGAGGAGG+AGG - Chr3:87609648-87609667 MsG0380016765.01.T01:CDS 45.0%
!! TATATTTAATAAAAATTAAG+TGG + Chr3:87609768-87609787 None:intergenic 5.0%
AAAGAAACGTGTGGAGCGGT+TGG - Chr3:87611359-87611378 MsG0380016765.01.T01:CDS 50.0%
GAAGGGAAGAAGGAAGGTGA+GGG - Chr3:87610164-87610183 MsG0380016765.01.T01:intron 50.0%
GACGTGGATGTGTTGGATGA+TGG - Chr3:87610216-87610235 MsG0380016765.01.T01:intron 50.0%
GGAGGTAAGGTCATGTTTGG+AGG + Chr3:87609489-87609508 None:intergenic 50.0%
GTTGGCTGAGGATCCAAGAA+TGG - Chr3:87611377-87611396 MsG0380016765.01.T01:CDS 50.0%
TCGCTCAACCAACTTTCCCT+AGG + Chr3:87609156-87609175 None:intergenic 50.0%
TGAAGGGAAGAAGGAAGGTG+AGG - Chr3:87610163-87610182 MsG0380016765.01.T01:intron 50.0%
! GAGGAAGTACGGACAGAAAG+TGG - Chr3:87610248-87610267 MsG0380016765.01.T01:intron 50.0%
CAACACATCCACGTCGCTCA+TGG + Chr3:87610211-87610230 None:intergenic 55.0%
CATGAGCGACGTGGATGTGT+TGG - Chr3:87610209-87610228 MsG0380016765.01.T01:intron 55.0%
CTTCAAGACCATGAGCGACG+TGG - Chr3:87610200-87610219 MsG0380016765.01.T01:intron 55.0%
TCATGAGGGGAGCCTATAGG+TGG - Chr3:87610799-87610818 MsG0380016765.01.T01:CDS 55.0%
GAAGGAAGGTGAGGGAGCCT+AGG - Chr3:87610172-87610191 MsG0380016765.01.T01:intron 60.0%
GGGTCATGAGGGGAGCCTAT+AGG - Chr3:87610796-87610815 MsG0380016765.01.T01:CDS 60.0%
! ACGTGTGGAGCGGTTGGCTG+AGG - Chr3:87611365-87611384 MsG0380016765.01.T01:CDS 65.0%
! GAGGGGGAGCGTGTCGAGAT+GGG + Chr3:87610849-87610868 None:intergenic 65.0%
! TGAGGGGGAGCGTGTCGAGA+TGG + Chr3:87610850-87610869 None:intergenic 65.0%
! GGGGAGCGTGTCGAGATGGG+TGG + Chr3:87610846-87610865 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr3 gene 87609156 87611836 87609156 ID=MsG0380016765.01;Name=MsG0380016765.01
Chr3 mRNA 87609156 87611836 87609156 ID=MsG0380016765.01.T01;Parent=MsG0380016765.01;Name=MsG0380016765.01.T01;_AED=0.39;_eAED=0.39;_QI=237|1|1|1|1|1|3|342|243
Chr3 exon 87609156 87609669 87609156 ID=MsG0380016765.01.T01:exon:22199;Parent=MsG0380016765.01.T01
Chr3 exon 87610700 87610942 87610700 ID=MsG0380016765.01.T01:exon:22198;Parent=MsG0380016765.01.T01
Chr3 exon 87611283 87611836 87611283 ID=MsG0380016765.01.T01:exon:22197;Parent=MsG0380016765.01.T01
Chr3 five_prime_UTR 87611600 87611836 87611600 ID=MsG0380016765.01.T01:five_prime_utr;Parent=MsG0380016765.01.T01
Chr3 CDS 87611283 87611599 87611283 ID=MsG0380016765.01.T01:cds;Parent=MsG0380016765.01.T01
Chr3 CDS 87610700 87610942 87610700 ID=MsG0380016765.01.T01:cds;Parent=MsG0380016765.01.T01
Chr3 CDS 87609498 87609669 87609498 ID=MsG0380016765.01.T01:cds;Parent=MsG0380016765.01.T01
Chr3 three_prime_UTR 87609156 87609497 87609156 ID=MsG0380016765.01.T01:three_prime_utr;Parent=MsG0380016765.01.T01
Gene Sequence

>MsG0380016765.01.T01

ATGTCAACAACAAATATTGTTAATCACCATAGCTTGTTTGATCAAGAGGAAGATCATGAGATCCCTATGCAAATGGGGTTCAATATTCCTTTCCCTCCAAACATGACCTTACCTCCTTTGGATAATTGCCATCATCAATCTTTGAAAGGTATCAGTGCAATAACACCTTCATCACTTTCTCCTGAAGCTGCAAATTTTGCTGAAACCCTCCTTGCAACAGCTGTTCAAAAACCACGAGAATTTGAAGATCATCTTACTTCTAGTTTTGGAGGAGGAGGCCAACTCCTTTCTTTGAACAGATCCAAAGTGAATTCATGGGCATGGGGAGAAGTAACTGATAGCTTGATGGGAAAAAGAAGTAGTGGAGGAGATGATCAACATCATCATCATAATCAACAACTAGGGGTTTCTGCCATAAAGATGAAGAAAATGAAGGGAAGAAGGAAGGTGAGGGAGCCTAGGTTTTGCTTCAAGACCATGAGCGACGTGGATGTGTTGGATGATGGTTACAAGTGGAGGAAGTACGGACAGAAAGTGGTAAAGAACACACAGCATCCAAGAAGCTACTACCGTTGCACACAAGATAATTGTCGAGTAAAGAAACGTGTGGAGCGGTTGGCTGAGGATCCAAGAATGGTGATAACCACATATGAAGGAAGACATGCTCACTCTCCATCAAATGAACTTGAAGAATCACAAACTCAATCTGAACTTACTAATTTCTTCTGGTAG

Protein sequence

>MsG0380016765.01.T01

MSTTNIVNHHSLFDQEEDHEIPMQMGFNIPFPPNMTLPPLDNCHHQSLKGISAITPSSLSPEAANFAETLLATAVQKPREFEDHLTSSFGGGGQLLSLNRSKVNSWAWGEVTDSLMGKRSSGGDDQHHHHNQQLGVSAIKMKKMKGRRKVREPRFCFKTMSDVDVLDDGYKWRKYGQKVVKNTQHPRSYYRCTQDNCRVKKRVERLAEDPRMVITTYEGRHAHSPSNELEESQTQSELTNFFW*