AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280010284.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280010284.01.T01 MTR_2g081110 98.592 497 7 0 68 564 173 669 0.0 1016
MsG0280010284.01.T01 MTR_8g464570 79.074 497 100 3 68 562 177 671 0.0 833
MsG0280010284.01.T01 MTR_7g012260 51.613 496 223 6 66 557 224 706 4.23e-171 502
MsG0280010284.01.T01 MTR_2g094860 39.262 461 261 9 64 518 186 633 8.30e-104 328
MsG0280010284.01.T01 MTR_4g058730 39.693 456 258 9 64 514 168 611 5.13e-103 323
MsG0280010284.01.T01 MTR_1g064240 36.145 498 299 8 64 555 180 664 2.85e-96 308
MsG0280010284.01.T01 MTR_3g088875 37.393 468 267 9 64 518 145 599 5.79e-96 307
MsG0280010284.01.T01 MTR_3g109030 38.217 471 269 11 64 525 187 644 1.90e-95 307
MsG0280010284.01.T01 MTR_2g460590 37.219 489 282 11 64 543 157 629 2.73e-95 305
MsG0280010284.01.T01 MTR_4g130820 37.634 465 260 12 64 515 209 656 1.19e-92 300
MsG0280010284.01.T01 MTR_3g091080 37.225 454 265 9 68 515 195 634 2.85e-91 295
MsG0280010284.01.T01 MTR_1g028370 34.292 487 281 10 68 545 197 653 6.77e-91 295
MsG0280010284.01.T01 MTR_7g034605 36.518 471 281 11 64 525 153 614 3.31e-88 286
MsG0280010284.01.T01 MTR_7g117310 35.408 466 269 8 64 515 139 586 2.21e-86 281
MsG0280010284.01.T01 MTR_7g117310 35.408 466 269 8 64 515 193 640 5.07e-86 282
MsG0280010284.01.T01 MTR_7g117310 35.408 466 269 8 64 515 205 652 7.95e-86 281
MsG0280010284.01.T01 MTR_8g027755 34.624 465 282 9 64 518 195 647 2.40e-84 277
MsG0280010284.01.T01 MTR_6g477760 34.328 469 285 8 68 523 237 695 1.41e-73 248
MsG0280010284.01.T01 MTR_6g075440 29.487 468 298 9 68 520 283 733 5.17e-67 232
MsG0280010284.01.T01 MTR_6g075440 29.487 468 298 9 68 520 283 733 6.13e-67 232
MsG0280010284.01.T01 MTR_6g075290 34.820 471 267 12 68 519 105 554 7.13e-66 224
MsG0280010284.01.T01 MTR_5g007630 33.405 467 276 10 68 520 283 728 9.66e-66 228
MsG0280010284.01.T01 MTR_6g075290 35.269 465 273 12 68 519 266 715 1.19e-65 227
MsG0280010284.01.T01 MTR_6g075290 35.269 465 273 12 68 519 307 756 3.78e-65 227
MsG0280010284.01.T01 MTR_6g076060 29.719 498 313 10 59 536 2 482 1.44e-60 209
MsG0280010284.01.T01 MTR_6g075390 29.508 427 268 10 68 480 229 636 9.64e-50 182
MsG0280010284.01.T01 MTR_6g075410 28.118 473 302 11 60 519 211 658 5.62e-48 177
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280010284.01.T01 AT5G54250 77.823 496 107 2 68 562 199 692 0.0 804
MsG0280010284.01.T01 AT5G54250 77.823 496 107 2 68 562 199 692 0.0 804
MsG0280010284.01.T01 AT5G54250 77.823 496 107 2 68 562 199 692 0.0 804
MsG0280010284.01.T01 AT5G54250 76.815 496 107 3 68 562 199 687 0.0 788
MsG0280010284.01.T01 AT5G15410 49.491 491 240 6 72 557 235 722 3.99e-155 461
MsG0280010284.01.T01 AT5G15410 49.491 491 240 6 72 557 234 721 5.36e-155 461
MsG0280010284.01.T01 AT2G28260 39.913 461 258 8 64 518 137 584 5.57e-107 335
MsG0280010284.01.T01 AT2G28260 40.043 462 256 9 64 518 177 624 1.37e-106 335
MsG0280010284.01.T01 AT5G57940 39.530 468 256 11 64 518 198 651 1.49e-98 315
MsG0280010284.01.T01 AT5G57940 39.530 468 256 11 64 518 198 651 1.49e-98 315
MsG0280010284.01.T01 AT5G57940 39.530 468 256 11 64 518 191 644 1.61e-98 315
MsG0280010284.01.T01 AT2G24610 38.197 466 268 11 68 525 188 641 5.66e-96 308
MsG0280010284.01.T01 AT1G19780 38.621 435 252 8 92 518 23 450 8.81e-96 302
MsG0280010284.01.T01 AT2G24610 38.197 466 268 11 68 525 203 656 1.71e-95 307
MsG0280010284.01.T01 AT4G30360 37.288 472 275 9 64 527 185 643 4.03e-95 306
MsG0280010284.01.T01 AT2G23980 39.278 443 250 8 92 524 213 646 8.70e-95 305
MsG0280010284.01.T01 AT2G23980 39.278 443 250 8 92 524 240 673 1.16e-94 305
MsG0280010284.01.T01 AT2G23980 39.278 443 250 8 92 524 240 673 1.16e-94 305
MsG0280010284.01.T01 AT2G23980 39.278 443 250 8 92 524 240 673 1.16e-94 305
MsG0280010284.01.T01 AT2G23980 39.278 443 250 8 92 524 240 673 1.16e-94 305
MsG0280010284.01.T01 AT2G23980 39.278 443 250 8 92 524 240 673 1.16e-94 305
MsG0280010284.01.T01 AT1G15990 38.514 444 242 9 91 518 227 655 4.55e-94 303
MsG0280010284.01.T01 AT1G19780 38.621 435 252 8 92 518 234 661 7.96e-94 303
MsG0280010284.01.T01 AT1G01340 36.066 488 281 9 64 545 178 640 1.51e-93 301
MsG0280010284.01.T01 AT1G01340 36.066 488 281 9 64 545 173 635 1.71e-93 301
MsG0280010284.01.T01 AT5G53130 37.391 460 255 10 68 515 198 636 2.02e-93 301
MsG0280010284.01.T01 AT4G30560 37.975 474 267 13 64 524 187 646 2.08e-93 301
MsG0280010284.01.T01 AT4G30560 37.975 474 267 13 64 524 187 646 2.08e-93 301
MsG0280010284.01.T01 AT4G30560 37.975 474 267 13 64 524 187 646 2.08e-93 301
MsG0280010284.01.T01 AT4G30560 37.975 474 267 13 64 524 213 672 2.65e-93 301
MsG0280010284.01.T01 AT4G30560 37.975 474 267 13 64 524 213 672 2.65e-93 301
MsG0280010284.01.T01 AT4G01010 35.378 489 284 10 64 545 178 641 3.33e-92 298
MsG0280010284.01.T01 AT4G01010 35.378 489 284 10 64 545 178 641 3.33e-92 298
MsG0280010284.01.T01 AT3G48010 36.247 469 273 9 64 518 154 610 2.45e-90 293
MsG0280010284.01.T01 AT2G23980 37.339 466 250 9 92 524 240 696 1.34e-89 293
MsG0280010284.01.T01 AT2G23980 37.339 466 250 9 92 524 240 696 1.34e-89 293
MsG0280010284.01.T01 AT2G23980 37.339 466 250 9 92 524 240 696 1.34e-89 293
MsG0280010284.01.T01 AT2G23980 37.339 466 250 9 92 524 240 696 1.34e-89 293
MsG0280010284.01.T01 AT5G14870 36.617 467 277 11 68 525 153 609 1.34e-87 286
MsG0280010284.01.T01 AT2G46430 34.836 488 283 12 64 544 182 641 2.88e-83 274
MsG0280010284.01.T01 AT2G46430 34.836 488 283 12 64 544 182 641 2.88e-83 274
MsG0280010284.01.T01 AT3G17690 34.416 462 278 11 66 518 270 715 2.13e-75 254
MsG0280010284.01.T01 AT3G17700 35.982 453 262 11 71 512 310 745 1.65e-73 249
MsG0280010284.01.T01 AT2G46450 33.333 441 259 13 92 518 127 546 1.02e-67 231
MsG0280010284.01.T01 AT2G46450 33.333 441 259 13 92 518 140 559 1.31e-67 231
MsG0280010284.01.T01 AT2G46450 33.333 441 259 13 92 518 163 582 1.79e-67 231
MsG0280010284.01.T01 AT2G46450 33.333 441 259 13 92 518 163 582 1.79e-67 231
MsG0280010284.01.T01 AT3G17690 34.127 378 233 8 66 442 270 632 1.67e-62 217
MsG0280010284.01.T01 AT3G17700 36.533 375 220 9 71 444 310 667 1.17e-61 216
MsG0280010284.01.T01 AT2G46440 32.798 436 254 10 122 544 12 421 4.86e-59 203
MsG0280010284.01.T01 AT2G46440 32.403 466 273 13 92 544 163 599 2.06e-58 206
MsG0280010284.01.T01 AT3G17690 30.739 257 167 5 66 321 270 516 3.71e-32 130
MsG0280010284.01.T01 AT5G37500 25.116 215 154 5 239 450 261 471 4.69e-15 79.0
MsG0280010284.01.T01 AT5G37500 25.234 214 153 5 240 450 262 471 5.80e-15 79.0
MsG0280010284.01.T01 AT5G37500 25.234 214 153 5 240 450 208 417 6.03e-15 78.6
MsG0280010284.01.T01 AT5G37500 25.234 214 153 5 240 450 262 471 6.34e-15 78.6
MsG0280010284.01.T01 AT3G02850 22.430 214 159 5 240 450 279 488 5.32e-13 72.4
MsG0280010284.01.T01 AT3G02850 22.430 214 159 5 240 450 279 488 5.81e-13 72.4
MsG0280010284.01.T01 AT3G02850 22.326 215 160 5 240 451 279 489 6.23e-13 72.0

Find 108 sgRNAs with CRISPR-Local

Find 309 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTGATGTTGTCAGCACTTT+TGG 0.210717 2:+67215925 MsG0280010284.01.T01:intron
AGATACTCCTTCCTATCTTT+TGG 0.215218 2:+67215073 MsG0280010284.01.T01:CDS
CTTCTAGTCACTATGCTAAT+TGG 0.241612 2:+67216015 MsG0280010284.01.T01:CDS
TGAATTCTTTGTCCTTTATT+AGG 0.242505 2:+67217360 MsG0280010284.01.T01:CDS
TTTGTCAAGGTCTACTTCTT+TGG 0.268654 2:+67217394 MsG0280010284.01.T01:CDS
TATCAAGTACCATCTTTGTT+TGG 0.281982 2:+67216577 MsG0280010284.01.T01:CDS
AGTGCTGATAACTATGAATT+TGG 0.287072 2:+67215000 MsG0280010284.01.T01:CDS
GTTGGAAGACGTTCTATAAA+TGG 0.317969 2:-67217007 None:intergenic
GGCTGCTGTGGCAATTCAAT+TGG 0.324383 2:+67217307 MsG0280010284.01.T01:CDS
GTTAAAAGCTGTTGTATGTT+AGG 0.328738 2:+67216935 MsG0280010284.01.T01:CDS
ATCAAGTACCATCTTTGTTT+GGG 0.333486 2:+67216578 MsG0280010284.01.T01:CDS
TAACTCCATCTCTTAGGAAT+TGG 0.337128 2:-67216916 None:intergenic
ACTCACCTGGTTGGAGAACT+TGG 0.342981 2:+67217285 MsG0280010284.01.T01:CDS
AGGGTCATGTTGGTATTTGT+TGG 0.347194 2:+67214798 MsG0280010284.01.T01:CDS
TTATAGTTTCCATAGTATAT+TGG 0.355926 2:-67214904 None:intergenic
GTACCATCTTTGTTTGGGTT+TGG 0.357835 2:+67216583 MsG0280010284.01.T01:CDS
TAGACAGAACAAGGTTGGTT+TGG 0.386399 2:+67214941 MsG0280010284.01.T01:CDS
TCATCTCCACTGAAGTTTCC+TGG 0.390660 2:-67216959 None:intergenic
ATGAATTTGGAGTTTATGAA+TGG 0.394019 2:+67215013 MsG0280010284.01.T01:CDS
GGGTCATGTTGGTATTTGTT+GGG 0.397628 2:+67214799 MsG0280010284.01.T01:CDS
ACAAATAGCATTCTACGAAC+TGG 0.398087 2:-67216869 None:intergenic
AATTGGCTTGGAGAAGGTAT+AGG 0.400107 2:+67217324 MsG0280010284.01.T01:CDS
CAATTAGCATAGTGACTAGA+AGG 0.401970 2:-67216014 None:intergenic
TTAGGAATTGGCTACTTTGA+AGG 0.405487 2:-67216904 None:intergenic
TGCAAAGAACCAATATACTA+TGG 0.411249 2:+67214895 MsG0280010284.01.T01:CDS
AAACTTGAGTGATGTTGATC+GGG 0.429397 2:-67212016 None:intergenic
TTGTTTGGGTTTGGTGAGAC+AGG 0.441635 2:+67216592 MsG0280010284.01.T01:CDS
GAGTCAAAATCATCGACATT+AGG 0.441734 2:-67217464 None:intergenic
AGGCCTACGAGGCCTAATAA+AGG 0.444915 2:-67217372 None:intergenic
CCATCCTTTCTGTTGTACTC+TGG 0.448749 2:-67215954 None:intergenic
TCCAACATCATCATCAACTT+TGG 0.456307 2:+67217024 MsG0280010284.01.T01:CDS
GTCATTAGGCCCCAAAAGAT+AGG 0.457093 2:-67215084 None:intergenic
AAATCATCGACATTAGGCTT+TGG 0.461854 2:-67217458 None:intergenic
GTAGAATGCTATTTGTGGTA+AGG 0.461877 2:+67216876 MsG0280010284.01.T01:CDS
GTGCGTCGAAACCTAACAAA+TGG 0.464641 2:+67214501 MsG0280010284.01.T01:CDS
TTTGGGGCCTAATGACTCTC+AGG 0.466761 2:+67215091 MsG0280010284.01.T01:CDS
AATAAAGGACAAAGAATTCA+AGG 0.472507 2:-67217357 None:intergenic
TTCTATCATGGTGTTTAAGA+AGG 0.475341 2:+67216984 MsG0280010284.01.T01:CDS
GAAATTAGACAGAACAAGGT+TGG 0.478036 2:+67214936 MsG0280010284.01.T01:CDS
CTGTGGCAATTCAATTGGCT+TGG 0.478572 2:+67217312 MsG0280010284.01.T01:CDS
AAGTCCCTTGTATTCACAAA+AGG 0.487195 2:+67216743 MsG0280010284.01.T01:CDS
AAGGTCTACTTCTTTGGAAG+AGG 0.489376 2:+67217400 MsG0280010284.01.T01:CDS
TCCTTTCTGTTGTACTCTGG+AGG 0.494095 2:-67215951 None:intergenic
TAGAATGCTATTTGTGGTAA+GGG 0.494337 2:+67216877 MsG0280010284.01.T01:CDS
AGTTCGTAGAATGCTATTTG+TGG 0.494344 2:+67216871 MsG0280010284.01.T01:CDS
AAAACTTGAGTGATGTTGAT+CGG 0.495921 2:-67212017 None:intergenic
ATATCCCTTCTCAAACCCTC+CGG 0.502776 2:-67216557 None:intergenic
GATCCTTGCTCTAACAAAGA+TGG 0.503367 2:-67214399 None:intergenic
GGTATTTGTTGGGACTTCAA+AGG 0.518699 2:+67214809 MsG0280010284.01.T01:CDS
TATATGGTGAAACAGGCAGC+AGG 0.526412 2:+67214778 MsG0280010284.01.T01:intron
TTGGAGAACTTGGGCTGCTG+TGG 0.530447 2:+67217295 MsG0280010284.01.T01:CDS
TAACTACGAGAGACAGTGTT+GGG 0.530575 2:+67216490 MsG0280010284.01.T01:CDS
CAATTCAATTGGCTTGGAGA+AGG 0.530721 2:+67217318 MsG0280010284.01.T01:CDS
TGTCCTTTATTAGGCCTCGT+AGG 0.534654 2:+67217369 MsG0280010284.01.T01:CDS
CAAATAGCATTCTACGAACT+GGG 0.537490 2:-67216868 None:intergenic
ATTCCATCTTTGTTAGAGCA+AGG 0.537624 2:+67214396 MsG0280010284.01.T01:CDS
AGTAGCCAATTCCTAAGAGA+TGG 0.538975 2:+67216911 MsG0280010284.01.T01:CDS
GAAAATACCTGAGAGTCATT+AGG 0.541685 2:-67215098 None:intergenic
AGTGATGTTGATCGGGGCCA+TGG 0.545642 2:-67212009 None:intergenic
GTATTTGTTGGGACTTCAAA+GGG 0.546964 2:+67214810 MsG0280010284.01.T01:CDS
CAGTGTTGGGCTGCCATGCG+CGG 0.554243 2:+67216503 MsG0280010284.01.T01:CDS
CTTGGAGAAGGTATAGGCAT+AGG 0.554858 2:+67217330 MsG0280010284.01.T01:CDS
TTAGATATTACTCACCTGGT+TGG 0.563077 2:+67217276 MsG0280010284.01.T01:CDS
CCAGAGTACAACAGAAAGGA+TGG 0.563680 2:+67215954 MsG0280010284.01.T01:CDS
TCACCAAACCCAAACAAAGA+TGG 0.566389 2:-67216586 None:intergenic
CTCACCTGGTTGGAGAACTT+GGG 0.567396 2:+67217286 MsG0280010284.01.T01:CDS
TGCATACAGTTAACAAGAGA+AGG 0.570005 2:+67216842 MsG0280010284.01.T01:intron
AACACTATTATATTAACTAG+TGG 0.571292 2:+67215988 MsG0280010284.01.T01:CDS
GACAGTTACCACAAGGACTT+CGG 0.573129 2:+67216456 MsG0280010284.01.T01:CDS
AGCTGTTGTATGTTAGGACC+AGG 0.573868 2:+67216941 MsG0280010284.01.T01:CDS
GTGGAGATGAGCTTCTATCA+TGG 0.575590 2:+67216972 MsG0280010284.01.T01:CDS
ACATTCATCAACGCCGCGCA+TGG 0.577989 2:-67216516 None:intergenic
TATGCTAATTGGAAACATCA+AGG 0.582197 2:+67216026 MsG0280010284.01.T01:CDS
ATCTCCCGGAGGGTTTGAGA+AGG 0.585770 2:+67216552 MsG0280010284.01.T01:CDS
TATCCCTTCTCAAACCCTCC+GGG 0.586412 2:-67216556 None:intergenic
AGTGTTAGATATTACTCACC+TGG 0.588815 2:+67217272 MsG0280010284.01.T01:CDS
AACAGGCAGCAGGGTCATGT+TGG 0.591008 2:+67214788 MsG0280010284.01.T01:intron
ACCAAAGTTGATGATGATGT+TGG 0.592070 2:-67217025 None:intergenic
TGTGAGACAACACCTGGTTG+TGG 0.593093 2:+67214856 MsG0280010284.01.T01:CDS
GGCCTCGTAGGCCTTTGTCA+AGG 0.598683 2:+67217381 MsG0280010284.01.T01:CDS
TGAAGAAATTAGACAGAACA+AGG 0.603321 2:+67214932 MsG0280010284.01.T01:CDS
TGAATACAAGGGACTTGACA+CGG 0.609591 2:-67216736 None:intergenic
TTAGGCCCCAAAAGATAGGA+AGG 0.610853 2:-67215080 None:intergenic
ATCGACATTAGGCTTTGGTG+AGG 0.612185 2:-67217453 None:intergenic
GGTCACAGAATTCAGAAGCA+AGG 0.613640 2:+67214962 MsG0280010284.01.T01:CDS
GATAGCGAATCCCCACCAAA+CGG 0.616213 2:-67214538 None:intergenic
TCTCCCGGAGGGTTTGAGAA+GGG 0.616232 2:+67216553 MsG0280010284.01.T01:CDS
AGAGCAAGGATCAATTGCGC+GGG 0.622769 2:+67214410 MsG0280010284.01.T01:CDS
GCAGCCCAAGTTCTCCAACC+AGG 0.629666 2:-67217290 None:intergenic
ACCTCCAGAGTACAACAGAA+AGG 0.635309 2:+67215950 MsG0280010284.01.T01:CDS
AGAATGCTATTTGTGGTAAG+GGG 0.637257 2:+67216878 MsG0280010284.01.T01:CDS
AACTTGAGTGATGTTGATCG+GGG 0.642762 2:-67212015 None:intergenic
TAGAGCAAGGATCAATTGCG+CGG 0.643328 2:+67214409 MsG0280010284.01.T01:CDS
GAGCAATGTGAGACAACACC+TGG 0.645036 2:+67214850 MsG0280010284.01.T01:CDS
ACACGCTGCCGAAGTCCTTG+TGG 0.649683 2:-67216464 None:intergenic
TTAGGACCAGGAAACTTCAG+TGG 0.652388 2:+67216953 MsG0280010284.01.T01:CDS
GAAATTGAAGATGACAAACA+TGG 0.653767 2:+67216415 MsG0280010284.01.T01:CDS
GACCTTGACAAAGGCCTACG+AGG 0.673725 2:-67217383 None:intergenic
TGAAGATGACAAACATGGAG+TGG 0.674136 2:+67216420 MsG0280010284.01.T01:CDS
AACAAAAGACAGTTACCACA+AGG 0.678519 2:+67216449 MsG0280010284.01.T01:CDS
ATATGGTGAAACAGGCAGCA+GGG 0.685470 2:+67214779 MsG0280010284.01.T01:intron
AGATGACAAACATGGAGTGG+TGG 0.685912 2:+67216423 MsG0280010284.01.T01:CDS
GTAACTACGAGAGACAGTGT+TGG 0.686561 2:+67216489 MsG0280010284.01.T01:CDS
AAAGAAGTAGACCTTGACAA+AGG 0.689518 2:-67217392 None:intergenic
CGATAGCGACGAGTACGATG+AGG 0.693290 2:+67212115 MsG0280010284.01.T01:CDS
CGACGATATCGTCAACAACG+AGG 0.696721 2:+67212085 MsG0280010284.01.T01:CDS
TTAGCATAGTGACTAGAAGG+AGG 0.697558 2:-67216011 None:intergenic
AGTGTTCTTAGTCCACAACC+AGG 0.703025 2:-67214868 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAAACAAATAAAATATGT+TGG - Chr2:67213778-67213797 None:intergenic 10.0%
!! ATATATCTATATATAGATAT+AGG + Chr2:67215449-67215468 MsG0280010284.01.T01:intron 10.0%
!! CAAATATTATTCTTATAAAT+AGG + Chr2:67212867-67212886 MsG0280010284.01.T01:intron 10.0%
!! CTATTTATAAGAATAATATT+TGG - Chr2:67212869-67212888 None:intergenic 10.0%
!! TAAATGTATTAAGATTAATT+TGG + Chr2:67213649-67213668 MsG0280010284.01.T01:intron 10.0%
!! TTCAATTAAAATACTTATTT+GGG + Chr2:67215520-67215539 MsG0280010284.01.T01:intron 10.0%
!!! AAATAAGTATTTTAATTGAA+GGG - Chr2:67215520-67215539 None:intergenic 10.0%
!!! ACAATGTAAATAATTTTTAT+CGG + Chr2:67214622-67214641 MsG0280010284.01.T01:intron 10.0%
!!! ATTTTATTTTTTACAAAAGA+GGG + Chr2:67216631-67216650 MsG0280010284.01.T01:intron 10.0%
!!! ATTTTTCTTAAAAAAATTGA+AGG - Chr2:67216182-67216201 None:intergenic 10.0%
!!! TATTTTATTTTTTACAAAAG+AGG + Chr2:67216630-67216649 MsG0280010284.01.T01:intron 10.0%
!!! TGAAATTTTTAAAATGTATT+TGG + Chr2:67214327-67214346 MsG0280010284.01.T01:intron 10.0%
!!! TTTTTCTTAAAAAAATTGAA+GGG - Chr2:67216181-67216200 None:intergenic 10.0%
!! AAAAAATTAAGGGATATTTA+TGG - Chr2:67213737-67213756 None:intergenic 15.0%
!! CTTCAATTAAAATACTTATT+TGG + Chr2:67215519-67215538 MsG0280010284.01.T01:intron 15.0%
!! TAAATAGACTTATTTGAATT+TGG - Chr2:67215279-67215298 None:intergenic 15.0%
!! TATTTAAAAATATCACTTCT+AGG + Chr2:67213608-67213627 MsG0280010284.01.T01:intron 15.0%
!!! ATAAGCAAAATCAATTTTTT+AGG - Chr2:67213108-67213127 None:intergenic 15.0%
!!! CAAAAAAAAACTCTTTTTAT+TGG + Chr2:67215348-67215367 MsG0280010284.01.T01:intron 15.0%
!!! CAAATAAGTATTTTAATTGA+AGG - Chr2:67215521-67215540 None:intergenic 15.0%
!!! TACATTTTGATTTTTTTTGT+TGG + Chr2:67216342-67216361 MsG0280010284.01.T01:intron 15.0%
!!! TGTGAATTTTGTTATTATAT+TGG + Chr2:67213201-67213220 MsG0280010284.01.T01:intron 15.0%
!!! TTAAAATTAGTCATCTTTTT+AGG + Chr2:67213401-67213420 MsG0280010284.01.T01:intron 15.0%
!!! TTTTTAAGAAAAATGAATCT+TGG + Chr2:67216188-67216207 MsG0280010284.01.T01:intron 15.0%
!! AATAAGAGAAGTAAATATTG+TGG - Chr2:67213175-67213194 None:intergenic 20.0%
!! ATAAGAGAAGTAAATATTGT+GGG - Chr2:67213174-67213193 None:intergenic 20.0%
!! ATTAATCTTGCTAAACAAAA+TGG - Chr2:67216122-67216141 None:intergenic 20.0%
!! CATTGAGTAAATAATGTATT+TGG - Chr2:67213083-67213102 None:intergenic 20.0%
!! CTAAATTGCATTATTATTCT+AGG + Chr2:67216780-67216799 MsG0280010284.01.T01:intron 20.0%
!! GAAAAGATTCAAAAACTAAA+AGG + Chr2:67213500-67213519 MsG0280010284.01.T01:intron 20.0%
!! GATAAAGATGTTAAAGAAAA+AGG - Chr2:67212523-67212542 None:intergenic 20.0%
!! TAATTATGTCACACATATTA+TGG - Chr2:67216146-67216165 None:intergenic 20.0%
!! TATCTTATAAAAAGAACCAA+TGG - Chr2:67212634-67212653 None:intergenic 20.0%
!! TATGTAAATAATACTCCATT+CGG + Chr2:67212760-67212779 MsG0280010284.01.T01:intron 20.0%
!! TATTACATTGTAAATACCAT+TGG + Chr2:67212615-67212634 MsG0280010284.01.T01:intron 20.0%
!! TCCATTATTAATACTTTATC+CGG - Chr2:67213139-67213158 None:intergenic 20.0%
!! TTATAGTTTCCATAGTATAT+TGG - Chr2:67214907-67214926 None:intergenic 20.0%
!! TTGGAATATAACAAATTTAG+AGG - Chr2:67215260-67215279 None:intergenic 20.0%
!! TTGTCTTGTATAAAAAGAAT+TGG + Chr2:67212721-67212740 MsG0280010284.01.T01:intron 20.0%
!!! AAAAGATGACTAATTTTAAG+TGG - Chr2:67213400-67213419 None:intergenic 20.0%
!!! AACTTCATGATTTTAAATTG+TGG + Chr2:67215134-67215153 MsG0280010284.01.T01:intron 20.0%
!!! ATGCAATTTTATCTATATGA+CGG + Chr2:67214661-67214680 MsG0280010284.01.T01:intron 20.0%
!!! CAACATCTTTTAAATTTACA+AGG - Chr2:67215552-67215571 None:intergenic 20.0%
!!! CAACTAGTTTTTCTTTTTTA+AGG - Chr2:67213838-67213857 None:intergenic 20.0%
!!! CACAACATATTTTTTTTGAA+TGG - Chr2:67215317-67215336 None:intergenic 20.0%
!!! TTAAAATACTTATTTGGGTT+CGG + Chr2:67215525-67215544 MsG0280010284.01.T01:intron 20.0%
!!! TTTTTGTTGGTGAATATAAT+AGG + Chr2:67216355-67216374 MsG0280010284.01.T01:intron 20.0%
! AACAAAGCTAAGTATTTGTA+TGG - Chr2:67214148-67214167 None:intergenic 25.0%
! AAGGTACGTAATAATTAACA+AGG + Chr2:67216045-67216064 MsG0280010284.01.T01:intron 25.0%
! AATAAAGGACAAAGAATTCA+AGG - Chr2:67217360-67217379 None:intergenic 25.0%
! ATCCATAAATAATTACCTGA+GGG - Chr2:67212557-67212576 None:intergenic 25.0%
! ATGCAAACATACACTATATA+TGG + Chr2:67214762-67214781 MsG0280010284.01.T01:intron 25.0%
! ATGTCATCATGAATTTCAAT+TGG - Chr2:67215788-67215807 None:intergenic 25.0%
! ATTCATTTGAGAGAAAAAGT+TGG - Chr2:67215756-67215775 None:intergenic 25.0%
! ATTCTTATAAATAGGACAAG+AGG + Chr2:67212875-67212894 MsG0280010284.01.T01:intron 25.0%
! CAAAAATGAAACCATTTGTT+AGG - Chr2:67214515-67214534 None:intergenic 25.0%
! CAAATGTGTACCTAAAATTA+GGG - Chr2:67217232-67217251 None:intergenic 25.0%
! CAACAAATCTTCAATTTAAG+AGG + Chr2:67215652-67215671 MsG0280010284.01.T01:intron 25.0%
! CCAAACTTTCTCTTATAAAT+AGG - Chr2:67212787-67212806 None:intergenic 25.0%
! CCTATTTATAAGAGAAAGTT+TGG + Chr2:67212784-67212803 MsG0280010284.01.T01:intron 25.0%
! CTTTATATTACGGTAAAATG+TGG + Chr2:67215195-67215214 MsG0280010284.01.T01:intron 25.0%
! GTCATATAGATAAAATTGCA+TGG - Chr2:67214662-67214681 None:intergenic 25.0%
! TAATTAACAAGGACTTACTT+AGG + Chr2:67216056-67216075 MsG0280010284.01.T01:intron 25.0%
! TCTTGTATAAAAAGAATTGG+AGG + Chr2:67212724-67212743 MsG0280010284.01.T01:intron 25.0%
! TGAATTCTTTGTCCTTTATT+AGG + Chr2:67217360-67217379 MsG0280010284.01.T01:CDS 25.0%
! TGAATTTCAATTGGGTATAA+TGG - Chr2:67215779-67215798 None:intergenic 25.0%
! TGAGTTAACAAAAAATTACG+TGG + Chr2:67212658-67212677 MsG0280010284.01.T01:intron 25.0%
! TGTCATCATGAATTTCAATT+GGG - Chr2:67215787-67215806 None:intergenic 25.0%
! TTCTTATAAATAGGACAAGA+GGG + Chr2:67212876-67212895 MsG0280010284.01.T01:intron 25.0%
!! AAAAACTAAAAGGACTTGTT+TGG + Chr2:67213510-67213529 MsG0280010284.01.T01:intron 25.0%
!! AAAACTAAAAGGACTTGTTT+GGG + Chr2:67213511-67213530 MsG0280010284.01.T01:intron 25.0%
!! AATATGTGACGCAAAATTTT+AGG + Chr2:67217095-67217114 MsG0280010284.01.T01:CDS 25.0%
!! ACCGGATAAAGTATTAATAA+TGG + Chr2:67213135-67213154 MsG0280010284.01.T01:intron 25.0%
!! ATGAATCTTGGTAATTCATT+TGG + Chr2:67216200-67216219 MsG0280010284.01.T01:intron 25.0%
!! ATGAATTTGGAGTTTATGAA+TGG + Chr2:67215013-67215032 MsG0280010284.01.T01:CDS 25.0%
!! ATTTTGCTTATAATAGTGAC+CGG + Chr2:67213117-67213136 MsG0280010284.01.T01:intron 25.0%
!! CAAAAACTAAAAGACTTGTT+TGG - Chr2:67213291-67213310 None:intergenic 25.0%
!! CACATTTTACCGTAATATAA+AGG - Chr2:67215197-67215216 None:intergenic 25.0%
!! CTAACAAATGGTTTCATTTT+TGG + Chr2:67214513-67214532 MsG0280010284.01.T01:CDS 25.0%
!! TTTCAAACAAGTCTTTTTAG+CGG - Chr2:67213484-67213503 None:intergenic 25.0%
!! TTTTCAACATATGGATGAAT+TGG + Chr2:67216694-67216713 MsG0280010284.01.T01:CDS 25.0%
!!! ATGTTAATCTCTGGAATATT+TGG + Chr2:67212403-67212422 MsG0280010284.01.T01:intron 25.0%
!!! TCATTCTCACAAAAGTTTTT+TGG + Chr2:67215904-67215923 MsG0280010284.01.T01:intron 25.0%
!!! TTCATCTTTTTCATTGAGTA+GGG + Chr2:67212199-67212218 MsG0280010284.01.T01:CDS 25.0%
!!! TTGGACTTTTGAAACTTAAA+GGG - Chr2:67213272-67213291 None:intergenic 25.0%
!!! TTTGGACTTTTGAAACTTAA+AGG - Chr2:67213273-67213292 None:intergenic 25.0%
AAAACTTGAGTGATGTTGAT+CGG - Chr2:67212020-67212039 None:intergenic 30.0%
AAGGGATATTTATGGTGAAT+GGG - Chr2:67213729-67213748 None:intergenic 30.0%
AATGCTTCAAAATCTTGTTC+AGG + Chr2:67216664-67216683 MsG0280010284.01.T01:intron 30.0%
AGTAATCGTTAGTACTTACA+TGG - Chr2:67214590-67214609 None:intergenic 30.0%
ATTACTTTCCAAGAGGAAAA+TGG + Chr2:67212223-67212242 MsG0280010284.01.T01:intron 30.0%
GAAATTGAAGATGACAAACA+TGG + Chr2:67216415-67216434 MsG0280010284.01.T01:CDS 30.0%
GATCCATAAATAATTACCTG+AGG - Chr2:67212558-67212577 None:intergenic 30.0%
GCAAATGTGTACCTAAAATT+AGG - Chr2:67217233-67217252 None:intergenic 30.0%
GTAATCGTTAGTACTTACAT+GGG - Chr2:67214589-67214608 None:intergenic 30.0%
GTCTATTGTAGATAGCATAT+TGG + Chr2:67213326-67213345 MsG0280010284.01.T01:intron 30.0%
GTTAAAAGCTGTTGTATGTT+AGG + Chr2:67216935-67216954 MsG0280010284.01.T01:CDS 30.0%
TAAGGGATATTTATGGTGAA+TGG - Chr2:67213730-67213749 None:intergenic 30.0%
TACACTATATATGGTGAAAC+AGG + Chr2:67214771-67214790 MsG0280010284.01.T01:intron 30.0%
TATCAAGTACCATCTTTGTT+TGG + Chr2:67216577-67216596 MsG0280010284.01.T01:CDS 30.0%
TATGCTAATTGGAAACATCA+AGG + Chr2:67216026-67216045 MsG0280010284.01.T01:CDS 30.0%
TCATCCATATGTTGAAAAAG+TGG - Chr2:67216692-67216711 None:intergenic 30.0%
TGAAGAAATTAGACAGAACA+AGG + Chr2:67214932-67214951 MsG0280010284.01.T01:CDS 30.0%
TGCAAAGAACCAATATACTA+TGG + Chr2:67214895-67214914 MsG0280010284.01.T01:CDS 30.0%
TTACTTTCCAAGAGGAAAAT+GGG + Chr2:67212224-67212243 MsG0280010284.01.T01:intron 30.0%
TTCTATCATGGTGTTTAAGA+AGG + Chr2:67216984-67217003 MsG0280010284.01.T01:CDS 30.0%
TTTAAGGATCATGACAAAGT+AGG - Chr2:67213822-67213841 None:intergenic 30.0%
! AGCTTATGATTACACACTTT+TGG + Chr2:67214086-67214105 MsG0280010284.01.T01:intron 30.0%
! ATCAAGTACCATCTTTGTTT+GGG + Chr2:67216578-67216597 MsG0280010284.01.T01:CDS 30.0%
! ATGCATGACTTTATCTGTTT+TGG + Chr2:67214005-67214024 MsG0280010284.01.T01:intron 30.0%
! ATGGAATAGAGTTTTTCTTC+TGG + Chr2:67212254-67212273 MsG0280010284.01.T01:intron 30.0%
! CAGACTGAGTGATAAATTTT+AGG - Chr2:67214477-67214496 None:intergenic 30.0%
! GAAAAAGATGAACGTTTTTG+TGG - Chr2:67212191-67212210 None:intergenic 30.0%
! GAAACTTAAAGGACTTGTTT+GGG + Chr2:67213540-67213559 MsG0280010284.01.T01:intron 30.0%
! GATATAAGATGTGTACGTTT+TGG + Chr2:67214027-67214046 MsG0280010284.01.T01:intron 30.0%
! GTTAAAGAAAAAGGCTTTGT+TGG - Chr2:67212514-67212533 None:intergenic 30.0%
! TAGAATGCTATTTGTGGTAA+GGG + Chr2:67216877-67216896 MsG0280010284.01.T01:CDS 30.0%
! TGAAACTTAAAGGACTTGTT+TGG + Chr2:67213539-67213558 MsG0280010284.01.T01:intron 30.0%
! TGTTTTGCAGATTGTGTTAT+GGG + Chr2:67214368-67214387 MsG0280010284.01.T01:intron 30.0%
! TTCTCCTTTTGTGAATACAA+GGG - Chr2:67216750-67216769 None:intergenic 30.0%
! TTGTTTTCATACATGCAGAT+TGG + Chr2:67213912-67213931 MsG0280010284.01.T01:intron 30.0%
! TTTCTCCTTTTGTGAATACA+AGG - Chr2:67216751-67216770 None:intergenic 30.0%
!! AGTGCTGATAACTATGAATT+TGG + Chr2:67215000-67215019 MsG0280010284.01.T01:CDS 30.0%
!! ATTAGTCATCTTTTTAGGCA+TGG + Chr2:67213406-67213425 MsG0280010284.01.T01:intron 30.0%
!! CTGAGTGATAAATTTTAGGA+AGG - Chr2:67214473-67214492 None:intergenic 30.0%
!! GACTAATTTTAAGTGGTGTT+AGG - Chr2:67213393-67213412 None:intergenic 30.0%
!! GTTCATCTTTTTCATTGAGT+AGG + Chr2:67212198-67212217 MsG0280010284.01.T01:CDS 30.0%
!!! GAAGGAGTATCTTTTCAATT+CGG - Chr2:67215065-67215084 None:intergenic 30.0%
!!! GTTTGGGACTTTTGATTTAA+AGG + Chr2:67213556-67213575 MsG0280010284.01.T01:intron 30.0%
!!! TGTATGTGTCTGTTTTTAGA+TGG + Chr2:67212337-67212356 MsG0280010284.01.T01:intron 30.0%
!!! TTGGGACTTTTGAAACTTAA+AGG + Chr2:67213529-67213548 MsG0280010284.01.T01:intron 30.0%
!!! TTTTAGGAAGGTATTGAAAC+AGG - Chr2:67214461-67214480 None:intergenic 30.0%
AAACTTGAGTGATGTTGATC+GGG - Chr2:67212019-67212038 None:intergenic 35.0%
AAAGAAGTAGACCTTGACAA+AGG - Chr2:67217395-67217414 None:intergenic 35.0%
AAATAATTACCTGAGGGAGA+GGG - Chr2:67212551-67212570 None:intergenic 35.0%
AAATCATCGACATTAGGCTT+TGG - Chr2:67217461-67217480 None:intergenic 35.0%
AACAAAAGACAGTTACCACA+AGG + Chr2:67216449-67216468 MsG0280010284.01.T01:CDS 35.0%
AAGTCCCTTGTATTCACAAA+AGG + Chr2:67216743-67216762 MsG0280010284.01.T01:CDS 35.0%
ACAAATAGCATTCTACGAAC+TGG - Chr2:67216872-67216891 None:intergenic 35.0%
AGGTTGAAATATCATTGCAG+AGG + Chr2:67215234-67215253 MsG0280010284.01.T01:intron 35.0%
AGTGTTAGATATTACTCACC+TGG + Chr2:67217272-67217291 MsG0280010284.01.T01:CDS 35.0%
ATGATGAATGAAGCCAAAAG+AGG - Chr2:67212460-67212479 None:intergenic 35.0%
ATTCCATCTTTGTTAGAGCA+AGG + Chr2:67214396-67214415 MsG0280010284.01.T01:CDS 35.0%
CAAATAGCATTCTACGAACT+GGG - Chr2:67216871-67216890 None:intergenic 35.0%
CAATTAGCATAGTGACTAGA+AGG - Chr2:67216017-67216036 None:intergenic 35.0%
CATGTTGCATAATACTGAGT+TGG + Chr2:67213859-67213878 MsG0280010284.01.T01:intron 35.0%
CGCTGCAAACCTTTATATTA+CGG + Chr2:67215185-67215204 MsG0280010284.01.T01:intron 35.0%
CGGTAAAATGTGGATAATCA+CGG + Chr2:67215205-67215224 MsG0280010284.01.T01:intron 35.0%
CGGTTAAATTGTGAGAATCA+TGG + Chr2:67214681-67214700 MsG0280010284.01.T01:intron 35.0%
CTCCCTCAGGTAATTATTTA+TGG + Chr2:67212552-67212571 MsG0280010284.01.T01:intron 35.0%
CTCTTATAAATAGGACCGAA+TGG - Chr2:67212778-67212797 None:intergenic 35.0%
CTTCTAGTCACTATGCTAAT+TGG + Chr2:67216015-67216034 MsG0280010284.01.T01:CDS 35.0%
GAAAATACCTGAGAGTCATT+AGG - Chr2:67215101-67215120 None:intergenic 35.0%
GAAATTAGACAGAACAAGGT+TGG + Chr2:67214936-67214955 MsG0280010284.01.T01:CDS 35.0%
GAGTCAAAATCATCGACATT+AGG - Chr2:67217467-67217486 None:intergenic 35.0%
GTGGATAATCACGGTATTTA+AGG + Chr2:67215214-67215233 MsG0280010284.01.T01:intron 35.0%
GTTGGAAGACGTTCTATAAA+TGG - Chr2:67217010-67217029 None:intergenic 35.0%
TAAATAATTACCTGAGGGAG+AGG - Chr2:67212552-67212571 None:intergenic 35.0%
TAACTCCATCTCTTAGGAAT+TGG - Chr2:67216919-67216938 None:intergenic 35.0%
TACATGACCCAACATAATCA+CGG - Chr2:67215612-67215631 None:intergenic 35.0%
TCAGTTGATCAAAAATCTCC+CGG + Chr2:67216538-67216557 MsG0280010284.01.T01:CDS 35.0%
TCCAACATCATCATCAACTT+TGG + Chr2:67217024-67217043 MsG0280010284.01.T01:CDS 35.0%
TGAAGCTATAAGTGTAATGC+AGG - Chr2:67213948-67213967 None:intergenic 35.0%
TGCATACAGTTAACAAGAGA+AGG + Chr2:67216842-67216861 MsG0280010284.01.T01:intron 35.0%
TTAGATATTACTCACCTGGT+TGG + Chr2:67217276-67217295 MsG0280010284.01.T01:CDS 35.0%
TTATGCTAGAGATCAAATGC+AGG + Chr2:67216270-67216289 MsG0280010284.01.T01:intron 35.0%
TTCAAGTCCAAAAACTTCGA+CGG - Chr2:67217062-67217081 None:intergenic 35.0%
TTCGTGCATTATTTGTACCT+TGG + Chr2:67215844-67215863 MsG0280010284.01.T01:intron 35.0%
TTGTACCTTGGTTGAAGTTA+AGG + Chr2:67215856-67215875 MsG0280010284.01.T01:intron 35.0%
TTTGACGGGACAAAAATAAG+TGG + Chr2:67216306-67216325 MsG0280010284.01.T01:intron 35.0%
TTTGTCAAGGTCTACTTCTT+TGG + Chr2:67217394-67217413 MsG0280010284.01.T01:CDS 35.0%
! AAACATAAACGCTCCTCTTT+TGG + Chr2:67212444-67212463 MsG0280010284.01.T01:intron 35.0%
! AACAAGTGTGCCCTAATTTT+AGG + Chr2:67217219-67217238 MsG0280010284.01.T01:intron 35.0%
! AAGTTTTCGTTTTCCCAAAG+TGG + Chr2:67213246-67213265 MsG0280010284.01.T01:intron 35.0%
! AATACTGAGTTGGCAAATGA+AGG + Chr2:67213869-67213888 MsG0280010284.01.T01:intron 35.0%
! AGAATGCTATTTGTGGTAAG+GGG + Chr2:67216878-67216897 MsG0280010284.01.T01:CDS 35.0%
! AGATACTCCTTCCTATCTTT+TGG + Chr2:67215073-67215092 MsG0280010284.01.T01:CDS 35.0%
! AGTTCGTAGAATGCTATTTG+TGG + Chr2:67216871-67216890 MsG0280010284.01.T01:CDS 35.0%
! ATACTCCTTCCTATCTTTTG+GGG + Chr2:67215075-67215094 MsG0280010284.01.T01:CDS 35.0%
! CTGTTTTGCAGATTGTGTTA+TGG + Chr2:67214367-67214386 MsG0280010284.01.T01:intron 35.0%
! GATACTCCTTCCTATCTTTT+GGG + Chr2:67215074-67215093 MsG0280010284.01.T01:CDS 35.0%
! GTAGAATGCTATTTGTGGTA+AGG + Chr2:67216876-67216895 MsG0280010284.01.T01:CDS 35.0%
! GTATTTGTTGGGACTTCAAA+GGG + Chr2:67214810-67214829 MsG0280010284.01.T01:CDS 35.0%
! GTGATGATGACTAATGACTA+TGG + Chr2:67215159-67215178 MsG0280010284.01.T01:intron 35.0%
! TTAGGAATTGGCTACTTTGA+AGG - Chr2:67216907-67216926 None:intergenic 35.0%
!! ACCAAAGTTGATGATGATGT+TGG - Chr2:67217028-67217047 None:intergenic 35.0%
!! AGCTTTTAACTCCATCTCTT+AGG - Chr2:67216925-67216944 None:intergenic 35.0%
!! ATCTTTTTAGGCATGGCAAA+TGG + Chr2:67213413-67213432 MsG0280010284.01.T01:intron 35.0%
!! CACACTTTTGGAAAACTTGT+TGG + Chr2:67214098-67214117 MsG0280010284.01.T01:intron 35.0%
!!! GGTACCACTTTTTCAACATA+TGG + Chr2:67216685-67216704 MsG0280010284.01.T01:intron 35.0%
!!! GTTTCATTTTTGGAACCGTT+TGG + Chr2:67214523-67214542 MsG0280010284.01.T01:CDS 35.0%
!!! TCTTTTGGCTTCATTCATCA+TGG + Chr2:67212459-67212478 MsG0280010284.01.T01:intron 35.0%
!!! TGTGTCTGTTTTTAGATGGT+TGG + Chr2:67212341-67212360 MsG0280010284.01.T01:intron 35.0%
AACTTGAGTGATGTTGATCG+GGG - Chr2:67212018-67212037 None:intergenic 40.0%
AGCATCCTTAACTTCAACCA+AGG - Chr2:67215864-67215883 None:intergenic 40.0%
AGGGTCATGTTGGTATTTGT+TGG + Chr2:67214798-67214817 MsG0280010284.01.T01:CDS 40.0%
AGTAGCCAATTCCTAAGAGA+TGG + Chr2:67216911-67216930 MsG0280010284.01.T01:CDS 40.0%
CACATGACCGTGATTATGTT+GGG + Chr2:67215602-67215621 MsG0280010284.01.T01:intron 40.0%
CTCATCTTTGGTACCAAATC+TGG + Chr2:67213365-67213384 MsG0280010284.01.T01:intron 40.0%
GATCCTTGCTCTAACAAAGA+TGG - Chr2:67214402-67214421 None:intergenic 40.0%
GGCTCAATAAGCTCACAATA+GGG - Chr2:67215583-67215602 None:intergenic 40.0%
GGGTCATGTTGGTATTTGTT+GGG + Chr2:67214799-67214818 MsG0280010284.01.T01:CDS 40.0%
TAACTACGAGAGACAGTGTT+GGG + Chr2:67216490-67216509 MsG0280010284.01.T01:CDS 40.0%
TAATGCACGAATCACGTACA+TGG - Chr2:67215835-67215854 None:intergenic 40.0%
TCACCAAACCCAAACAAAGA+TGG - Chr2:67216589-67216608 None:intergenic 40.0%
TGAAACTTAAAGGGCCACTT+TGG - Chr2:67213263-67213282 None:intergenic 40.0%
TGAAGATGACAAACATGGAG+TGG + Chr2:67216420-67216439 MsG0280010284.01.T01:CDS 40.0%
TGAATACAAGGGACTTGACA+CGG - Chr2:67216739-67216758 None:intergenic 40.0%
TGCTTCCTTGAACTCATCTT+TGG + Chr2:67213353-67213372 MsG0280010284.01.T01:intron 40.0%
TGGCTCAATAAGCTCACAAT+AGG - Chr2:67215584-67215603 None:intergenic 40.0%
TGGTACCAAAGATGAGTTCA+AGG - Chr2:67213361-67213380 None:intergenic 40.0%
TTAACATGTCCGTCATGCAA+CGG - Chr2:67212390-67212409 None:intergenic 40.0%
TTAGCATAGTGACTAGAAGG+AGG - Chr2:67216014-67216033 None:intergenic 40.0%
TTGATCAAAAATCTCCCGGA+GGG + Chr2:67216542-67216561 MsG0280010284.01.T01:CDS 40.0%
TTTCTTCTGGTGTGTGCAAT+GGG + Chr2:67212267-67212286 MsG0280010284.01.T01:intron 40.0%
! AAGGTCTACTTCTTTGGAAG+AGG + Chr2:67217400-67217419 MsG0280010284.01.T01:CDS 40.0%
! AATGTCTGATTGCTGGTTAG+AGG - Chr2:67214124-67214143 None:intergenic 40.0%
! AGAGAGTGCATAGAAGAAAG+TGG - Chr2:67212305-67212324 None:intergenic 40.0%
! CTTACAACCGTCGAAGTTTT+TGG + Chr2:67217052-67217071 MsG0280010284.01.T01:CDS 40.0%
! GAAACTTAAAGGGCCACTTT+GGG - Chr2:67213262-67213281 None:intergenic 40.0%
! GAGAGTGCATAGAAGAAAGT+GGG - Chr2:67212304-67212323 None:intergenic 40.0%
! GGTATTTGTTGGGACTTCAA+AGG + Chr2:67214809-67214828 MsG0280010284.01.T01:CDS 40.0%
! GTACCATCTTTGTTTGGGTT+TGG + Chr2:67216583-67216602 MsG0280010284.01.T01:CDS 40.0%
! GTAGGGTATTACTTTCCAAG+AGG + Chr2:67212216-67212235 MsG0280010284.01.T01:intron 40.0%
! GTGATGTTGTCAGCACTTTT+GGG + Chr2:67215926-67215945 MsG0280010284.01.T01:intron 40.0%
! TAGACAGAACAAGGTTGGTT+TGG + Chr2:67214941-67214960 MsG0280010284.01.T01:CDS 40.0%
! TGAACGTTTTTGTGGCTGTT+TGG - Chr2:67212183-67212202 None:intergenic 40.0%
! TTTTCTTCTGGTGTGTGCAA+TGG + Chr2:67212266-67212285 MsG0280010284.01.T01:intron 40.0%
! TTTTGTCCCGTCAAATCGAT+CGG - Chr2:67216301-67216320 None:intergenic 40.0%
!! AATTGGCTTGGAGAAGGTAT+AGG + Chr2:67217324-67217343 MsG0280010284.01.T01:CDS 40.0%
!! ATGACGGACATGTTAATCTC+TGG + Chr2:67212394-67212413 MsG0280010284.01.T01:intron 40.0%
!! CAAGTCTTTTTAGCGGATGA+TGG - Chr2:67213477-67213496 None:intergenic 40.0%
!! CAATTCAATTGGCTTGGAGA+AGG + Chr2:67217318-67217337 MsG0280010284.01.T01:CDS 40.0%
!! CGAAGTTTTTGGACTTGAAG+CGG + Chr2:67217063-67217082 MsG0280010284.01.T01:CDS 40.0%
!! GGTATTTCCGATCGATTTGA+CGG + Chr2:67216291-67216310 MsG0280010284.01.T01:intron 40.0%
!! GTATTTCCGATCGATTTGAC+GGG + Chr2:67216292-67216311 MsG0280010284.01.T01:intron 40.0%
!! TGTGTGCAATGGGTTATTTG+TGG + Chr2:67212277-67212296 MsG0280010284.01.T01:intron 40.0%
!! TTTTTAGGCATGGCAAATGG+TGG + Chr2:67213416-67213435 MsG0280010284.01.T01:intron 40.0%
!!! ATTTTTGGAACCGTTTGGTG+GGG + Chr2:67214528-67214547 MsG0280010284.01.T01:CDS 40.0%
!!! CATTTTTGGAACCGTTTGGT+GGG + Chr2:67214527-67214546 MsG0280010284.01.T01:CDS 40.0%
!!! TCATTTTTGGAACCGTTTGG+TGG + Chr2:67214526-67214545 MsG0280010284.01.T01:CDS 40.0%
ACCTCCAGAGTACAACAGAA+AGG + Chr2:67215950-67215969 MsG0280010284.01.T01:CDS 45.0%
AGATGACAAACATGGAGTGG+TGG + Chr2:67216423-67216442 MsG0280010284.01.T01:CDS 45.0%
AGCTGTTGTATGTTAGGACC+AGG + Chr2:67216941-67216960 MsG0280010284.01.T01:CDS 45.0%
AGTGTTCTTAGTCCACAACC+AGG - Chr2:67214871-67214890 None:intergenic 45.0%
ATATCCCTTCTCAAACCCTC+CGG - Chr2:67216560-67216579 None:intergenic 45.0%
ATATGGTGAAACAGGCAGCA+GGG + Chr2:67214779-67214798 MsG0280010284.01.T01:intron 45.0%
CCAACATAATCACGGTCATG+TGG - Chr2:67215604-67215623 None:intergenic 45.0%
CCACATGACCGTGATTATGT+TGG + Chr2:67215601-67215620 MsG0280010284.01.T01:intron 45.0%
CCAGAGTACAACAGAAAGGA+TGG + Chr2:67215954-67215973 MsG0280010284.01.T01:CDS 45.0%
CCATCCTTTCTGTTGTACTC+TGG - Chr2:67215957-67215976 None:intergenic 45.0%
CTGTGGCAATTCAATTGGCT+TGG + Chr2:67217312-67217331 MsG0280010284.01.T01:CDS 45.0%
GACAGTTACCACAAGGACTT+CGG + Chr2:67216456-67216475 MsG0280010284.01.T01:CDS 45.0%
GGTCACAGAATTCAGAAGCA+AGG + Chr2:67214962-67214981 MsG0280010284.01.T01:CDS 45.0%
GTAACTACGAGAGACAGTGT+TGG + Chr2:67216489-67216508 MsG0280010284.01.T01:CDS 45.0%
GTATGGCAATGTCTGATTGC+TGG - Chr2:67214131-67214150 None:intergenic 45.0%
GTCATTAGGCCCCAAAAGAT+AGG - Chr2:67215087-67215106 None:intergenic 45.0%
GTGCGTCGAAACCTAACAAA+TGG + Chr2:67214501-67214520 MsG0280010284.01.T01:CDS 45.0%
GTGGAGATGAGCTTCTATCA+TGG + Chr2:67216972-67216991 MsG0280010284.01.T01:CDS 45.0%
GTTGATCAAAAATCTCCCGG+AGG + Chr2:67216541-67216560 MsG0280010284.01.T01:CDS 45.0%
TAGAGCAAGGATCAATTGCG+CGG + Chr2:67214409-67214428 MsG0280010284.01.T01:CDS 45.0%
TATATGGTGAAACAGGCAGC+AGG + Chr2:67214778-67214797 MsG0280010284.01.T01:intron 45.0%
TCATCTCCACTGAAGTTTCC+TGG - Chr2:67216962-67216981 None:intergenic 45.0%
TCCTTTCTGTTGTACTCTGG+AGG - Chr2:67215954-67215973 None:intergenic 45.0%
TGTCCTTTATTAGGCCTCGT+AGG + Chr2:67217369-67217388 MsG0280010284.01.T01:CDS 45.0%
TTAGGACCAGGAAACTTCAG+TGG + Chr2:67216953-67216972 MsG0280010284.01.T01:CDS 45.0%
TTAGGCCCCAAAAGATAGGA+AGG - Chr2:67215083-67215102 None:intergenic 45.0%
! ATCGACATTAGGCTTTGGTG+AGG - Chr2:67217456-67217475 None:intergenic 45.0%
! CTTGGAGAAGGTATAGGCAT+AGG + Chr2:67217330-67217349 MsG0280010284.01.T01:CDS 45.0%
! GGTGATGTTGTCAGCACTTT+TGG + Chr2:67215925-67215944 MsG0280010284.01.T01:intron 45.0%
! TCTTCAGCCCATTTTCCTCT+TGG - Chr2:67212234-67212253 None:intergenic 45.0%
!! AGTTTTTGGACTTGAAGCGG+AGG + Chr2:67217066-67217085 MsG0280010284.01.T01:CDS 45.0%
!! GAGGAAAATGGGCTGAAGAA+TGG + Chr2:67212235-67212254 MsG0280010284.01.T01:intron 45.0%
!! GGCTTTGTTGGCTTTGAAGA+AGG - Chr2:67212502-67212521 None:intergenic 45.0%
!! TTGTTTGGGTTTGGTGAGAC+AGG + Chr2:67216592-67216611 MsG0280010284.01.T01:CDS 45.0%
!! AAAGTAAAATAAAAAAATTA+AGG - Chr2:67213748-67213767 None:intergenic 5.0%
!! AAGTAAAATAAAAAAATTAA+GGG - Chr2:67213747-67213766 None:intergenic 5.0%
!! TGTAAAAAATAAAATAAATT+GGG - Chr2:67216626-67216645 None:intergenic 5.0%
!! TTGTAAAAAATAAAATAAAT+TGG - Chr2:67216627-67216646 None:intergenic 5.0%
ACTCACCTGGTTGGAGAACT+TGG + Chr2:67217285-67217304 MsG0280010284.01.T01:CDS 50.0%
AGAGCAAGGATCAATTGCGC+GGG + Chr2:67214410-67214429 MsG0280010284.01.T01:CDS 50.0%
AGGCCTACGAGGCCTAATAA+AGG - Chr2:67217375-67217394 None:intergenic 50.0%
CACCGTTATCCGTTGCATGA+CGG + Chr2:67212378-67212397 MsG0280010284.01.T01:intron 50.0%
CGACGATATCGTCAACAACG+AGG + Chr2:67212085-67212104 MsG0280010284.01.T01:CDS 50.0%
CTCACCTGGTTGGAGAACTT+GGG + Chr2:67217286-67217305 MsG0280010284.01.T01:CDS 50.0%
GAGCAATGTGAGACAACACC+TGG + Chr2:67214850-67214869 MsG0280010284.01.T01:CDS 50.0%
GATAGCGAATCCCCACCAAA+CGG - Chr2:67214541-67214560 None:intergenic 50.0%
GGCTGCTGTGGCAATTCAAT+TGG + Chr2:67217307-67217326 MsG0280010284.01.T01:CDS 50.0%
GTCCGTCATGCAACGGATAA+CGG - Chr2:67212383-67212402 None:intergenic 50.0%
TAATTACCTGAGGGAGAGGG+AGG - Chr2:67212548-67212567 None:intergenic 50.0%
TATCCCTTCTCAAACCCTCC+GGG - Chr2:67216559-67216578 None:intergenic 50.0%
TGTGAGACAACACCTGGTTG+TGG + Chr2:67214856-67214875 MsG0280010284.01.T01:CDS 50.0%
! CATGCAACGGATAACGGTGA+CGG - Chr2:67212377-67212396 None:intergenic 50.0%
! GTGGTGTTAGGAGCCAGATT+TGG - Chr2:67213381-67213400 None:intergenic 50.0%
! TTTGGGGCCTAATGACTCTC+AGG + Chr2:67215091-67215110 MsG0280010284.01.T01:CDS 50.0%
!! TGGGTTTGGTGAGACAGGTA+AGG + Chr2:67216597-67216616 MsG0280010284.01.T01:intron 50.0%
AACAGGCAGCAGGGTCATGT+TGG + Chr2:67214788-67214807 MsG0280010284.01.T01:intron 55.0%
ACATTCATCAACGCCGCGCA+TGG - Chr2:67216519-67216538 None:intergenic 55.0%
ATCTCCCGGAGGGTTTGAGA+AGG + Chr2:67216552-67216571 MsG0280010284.01.T01:CDS 55.0%
CGATAGCGACGAGTACGATG+AGG + Chr2:67212115-67212134 MsG0280010284.01.T01:CDS 55.0%
GACCTTGACAAAGGCCTACG+AGG - Chr2:67217386-67217405 None:intergenic 55.0%
TCTCCCGGAGGGTTTGAGAA+GGG + Chr2:67216553-67216572 MsG0280010284.01.T01:CDS 55.0%
TTGGAGAACTTGGGCTGCTG+TGG + Chr2:67217295-67217314 MsG0280010284.01.T01:CDS 55.0%
ACACGCTGCCGAAGTCCTTG+TGG - Chr2:67216467-67216486 None:intergenic 60.0%
GCAGCCCAAGTTCTCCAACC+AGG - Chr2:67217293-67217312 None:intergenic 60.0%
GGCCTCGTAGGCCTTTGTCA+AGG + Chr2:67217381-67217400 MsG0280010284.01.T01:CDS 60.0%
TATCCTCCTCCCTCTCCCTC+AGG + Chr2:67212539-67212558 MsG0280010284.01.T01:intron 60.0%
TTACCTGAGGGAGAGGGAGG+AGG - Chr2:67212545-67212564 None:intergenic 60.0%
! CAGTGTTGGGCTGCCATGCG+CGG + Chr2:67216503-67216522 MsG0280010284.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr2 gene 67212011 67217493 67212011 ID=MsG0280010284.01;Name=MsG0280010284.01
Chr2 mRNA 67212011 67217493 67212011 ID=MsG0280010284.01.T01;Parent=MsG0280010284.01;Name=MsG0280010284.01.T01;_AED=0.17;_eAED=0.17;_QI=0|0|0|1|1|1|8|0|564
Chr2 exon 67212011 67212220 67212011 ID=MsG0280010284.01.T01:exon:5527;Parent=MsG0280010284.01.T01
Chr2 exon 67214378 67214590 67214378 ID=MsG0280010284.01.T01:exon:5528;Parent=MsG0280010284.01.T01
Chr2 exon 67214793 67215112 67214793 ID=MsG0280010284.01.T01:exon:5529;Parent=MsG0280010284.01.T01
Chr2 exon 67215939 67216047 67215939 ID=MsG0280010284.01.T01:exon:5530;Parent=MsG0280010284.01.T01
Chr2 exon 67216377 67216613 67216377 ID=MsG0280010284.01.T01:exon:5531;Parent=MsG0280010284.01.T01
Chr2 exon 67216686 67216772 67216686 ID=MsG0280010284.01.T01:exon:5532;Parent=MsG0280010284.01.T01
Chr2 exon 67216851 67217116 67216851 ID=MsG0280010284.01.T01:exon:5533;Parent=MsG0280010284.01.T01
Chr2 exon 67217241 67217493 67217241 ID=MsG0280010284.01.T01:exon:5534;Parent=MsG0280010284.01.T01
Chr2 CDS 67212011 67212220 67212011 ID=MsG0280010284.01.T01:cds;Parent=MsG0280010284.01.T01
Chr2 CDS 67214378 67214590 67214378 ID=MsG0280010284.01.T01:cds;Parent=MsG0280010284.01.T01
Chr2 CDS 67214793 67215112 67214793 ID=MsG0280010284.01.T01:cds;Parent=MsG0280010284.01.T01
Chr2 CDS 67215939 67216047 67215939 ID=MsG0280010284.01.T01:cds;Parent=MsG0280010284.01.T01
Chr2 CDS 67216377 67216613 67216377 ID=MsG0280010284.01.T01:cds;Parent=MsG0280010284.01.T01
Chr2 CDS 67216686 67216772 67216686 ID=MsG0280010284.01.T01:cds;Parent=MsG0280010284.01.T01
Chr2 CDS 67216851 67217116 67216851 ID=MsG0280010284.01.T01:cds;Parent=MsG0280010284.01.T01
Chr2 CDS 67217241 67217493 67217241 ID=MsG0280010284.01.T01:cds;Parent=MsG0280010284.01.T01
Gene Sequence

>MsG0280010284.01.T01

ATGGCCCCGATCAACATCACTCAAGTTTTAATTCAAACATGCAACACTACTATTACAAACACTGACGATGACATCGACGATATCGTCAACAACGAGGTTGTTAACGATAGCGACGAGTACGATGAGGATGAGTATCAGTATCAGCACGAAGAAGATGAAAAAGAAGAAACCAAACAGCCACAAAAACGTTCATCTTTTTCATTGAGTAGGATTGTGTTATGGGTGACAATTCCATCTTTGTTAGAGCAAGGATCAATTGCGCGGGTGATAACTGTATTGTTGATTATGTTCCTGTTTCAATACCTTCCTAAAATTTATCACTCAGTCTGCTTCGTGCGTCGAAACCTAACAAATGGTTTCATTTTTGGAACCGTTTGGTGGGGATTCGCTATCAATATGATCGCTTATTTTGTCGCTTCCCATGCAGCAGGGTCATGTTGGTATTTGTTGGGACTTCAAAGGGCAGCAAAGTGTCTAGAAGAGCAATGTGAGACAACACCTGGTTGTGGACTAAGAACACTGTGTTGCAAAGAACCAATATACTATGGAAACTATAACATGTTGAAGAAATTAGACAGAACAAGGTTGGTTTGGTCACAGAATTCAGAAGCAAGGTCTACATGTTTAGCTAGTGCTGATAACTATGAATTTGGAGTTTATGAATGGAGTGTTCAACTTGTTACAAATAATAGCCGAATTGAAAAGATACTCCTTCCTATCTTTTGGGGCCTAATGACTCTCAGCACTTTTGGGAACCTCCAGAGTACAACAGAAAGGATGGAAGTCGTTTTCAACACTATTATATTAACTAGTGGCCTCCTTCTAGTCACTATGCTAATTGGAAACATCAAGGTATTTTTACATGCTACAACATCAAAGAAGCAAGCAATGAAATTGAAGATGACAAACATGGAGTGGTGGATGAACAAAAGACAGTTACCACAAGGACTTCGGCAGCGTGTGCGTAACTACGAGAGACAGTGTTGGGCTGCCATGCGCGGCGTTGATGAATGTCAGTTGATCAAAAATCTCCCGGAGGGTTTGAGAAGGGATATCAAGTACCATCTTTGTTTGGGTTTGGTGAGACAGGTACCACTTTTTCAACATATGGATGAATTGGTGCTAGAGTACATTTGTGACCGTGTCAAGTCCCTTGTATTCACAAAAGGAGAAACATTAACAAGAGAAGGAGACCCAGTTCGTAGAATGCTATTTGTGGTAAGGGGTCACCTTCAAAGTAGCCAATTCCTAAGAGATGGAGTTAAAAGCTGTTGTATGTTAGGACCAGGAAACTTCAGTGGAGATGAGCTTCTATCATGGTGTTTAAGAAGGCCATTTATAGAACGTCTTCCAACATCATCATCAACTTTGGTGACACTTACAACCGTCGAAGTTTTTGGACTTGAAGCGGAGGATGTCAAATATGTGACGCAAAATTTTAGGTACACATTTGCAAAAGAAAATGTTAGAAGAAGTGTTAGATATTACTCACCTGGTTGGAGAACTTGGGCTGCTGTGGCAATTCAATTGGCTTGGAGAAGGTATAGGCATAGGTTGACCTTGAATTCTTTGTCCTTTATTAGGCCTCGTAGGCCTTTGTCAAGGTCTACTTCTTTGGAAGAGGATAGACTTCGTCTCTATACAGCTTTGCTAACCTCACCAAAGCCTAATGTCGATGATTTTGACTCTTCATAA
Protein sequence

>MsG0280010284.01.T01

MAPINITQVLIQTCNTTITNTDDDIDDIVNNEVVNDSDEYDEDEYQYQHEEDEKEETKQPQKRSSFSLSRIVLWVTIPSLLEQGSIARVITVLLIMFLFQYLPKIYHSVCFVRRNLTNGFIFGTVWWGFAINMIAYFVASHAAGSCWYLLGLQRAAKCLEEQCETTPGCGLRTLCCKEPIYYGNYNMLKKLDRTRLVWSQNSEARSTCLASADNYEFGVYEWSVQLVTNNSRIEKILLPIFWGLMTLSTFGNLQSTTERMEVVFNTIILTSGLLLVTMLIGNIKVFLHATTSKKQAMKLKMTNMEWWMNKRQLPQGLRQRVRNYERQCWAAMRGVDECQLIKNLPEGLRRDIKYHLCLGLVRQVPLFQHMDELVLEYICDRVKSLVFTKGETLTREGDPVRRMLFVVRGHLQSSQFLRDGVKSCCMLGPGNFSGDELLSWCLRRPFIERLPTSSSTLVTLTTVEVFGLEAEDVKYVTQNFRYTFAKENVRRSVRYYSPGWRTWAAVAIQLAWRRYRHRLTLNSLSFIRPRRPLSRSTSLEEDRLRLYTALLTSPKPNVDDFDSS*