Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680031264.01.T01 | XP_003629468.2 | 93.782 | 193 | 11 | 1 | 6 | 198 | 282 | 473 | 4.99E-112 | 338 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680031264.01.T01 | Q8L7A0 | 63.536 | 181 | 65 | 1 | 14 | 193 | 295 | 475 | 1.33E-67 | 217 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680031264.01.T01 | G7LEU1 | 93.782 | 193 | 11 | 1 | 6 | 198 | 282 | 473 | 2.38e-112 | 338 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048660.01 | MsG0680031264.01 | 0.821561 | 3.782027e-53 | 3.087550e-50 |
| MsG0180000129.01 | MsG0680031264.01 | 0.802815 | 4.689335e-49 | 2.319392e-46 |
| MsG0180000139.01 | MsG0680031264.01 | 0.800336 | 1.511737e-48 | 7.021041e-46 |
| MsG0180000241.01 | MsG0680031264.01 | 0.810476 | 1.131025e-50 | 6.824560e-48 |
| MsG0180000404.01 | MsG0680031264.01 | 0.805354 | 1.390018e-49 | 7.338175e-47 |
| MsG0180000777.01 | MsG0680031264.01 | 0.806010 | 1.012135e-49 | 5.434214e-47 |
| MsG0180000782.01 | MsG0680031264.01 | 0.812279 | 4.592206e-51 | 2.907485e-48 |
| MsG0180001002.01 | MsG0680031264.01 | 0.831460 | 1.648773e-55 | 1.790436e-52 |
| MsG0180001886.01 | MsG0680031264.01 | 0.813192 | 2.899376e-51 | 1.880672e-48 |
| MsG0180001892.01 | MsG0680031264.01 | 0.807068 | 6.054511e-50 | 3.339944e-47 |
| MsG0180002794.01 | MsG0680031264.01 | 0.805099 | 1.571764e-49 | 8.243449e-47 |
| MsG0180003403.01 | MsG0680031264.01 | 0.843664 | 1.219596e-58 | 1.921859e-55 |
| MsG0180003741.01 | MsG0680031264.01 | 0.818367 | 2.034355e-52 | 1.519902e-49 |
| MsG0180004481.01 | MsG0680031264.01 | 0.828614 | 8.151473e-55 | 8.143908e-52 |
| MsG0180004482.01 | MsG0680031264.01 | 0.820952 | 5.224944e-53 | 4.194151e-50 |
| MsG0180004493.01 | MsG0680031264.01 | 0.824685 | 7.059440e-54 | 6.298462e-51 |
| MsG0180004509.01 | MsG0680031264.01 | 0.801052 | 1.079939e-48 | 5.107738e-46 |
| MsG0180004765.01 | MsG0680031264.01 | 0.826832 | 2.185022e-54 | 2.072339e-51 |
| MsG0180004928.01 | MsG0680031264.01 | 0.800402 | 1.465926e-48 | 6.819576e-46 |
| MsG0180005113.01 | MsG0680031264.01 | 0.816420 | 5.580955e-52 | 3.952520e-49 |
| MsG0180005153.01 | MsG0680031264.01 | 0.837212 | 5.938742e-57 | 7.660222e-54 |
| MsG0180006024.01 | MsG0680031264.01 | 0.812909 | 3.344254e-51 | 2.152830e-48 |
| MsG0180006096.01 | MsG0680031264.01 | 0.810203 | 1.295424e-50 | 7.760244e-48 |
| MsG0180006134.01 | MsG0680031264.01 | 0.805376 | 1.375672e-49 | 7.266397e-47 |
| MsG0280006306.01 | MsG0680031264.01 | -0.807858 | 4.115356e-50 | 2.317315e-47 |
| MsG0280006360.01 | MsG0680031264.01 | 0.812717 | 3.683088e-51 | 2.359081e-48 |
| MsG0280010722.01 | MsG0680031264.01 | 0.805587 | 1.242456e-49 | 6.598460e-47 |
| MsG0280010788.01 | MsG0680031264.01 | 0.810050 | 1.397365e-50 | 8.338114e-48 |
| MsG0280011109.01 | MsG0680031264.01 | 0.819381 | 1.196858e-52 | 9.194751e-50 |
| MsG0280011329.01 | MsG0680031264.01 | 0.850298 | 1.858418e-60 | 3.623639e-57 |
| MsG0280011339.01 | MsG0680031264.01 | 0.803395 | 3.558784e-49 | 1.786366e-46 |
| MsG0380013183.01 | MsG0680031264.01 | 0.805963 | 1.035478e-49 | 5.552832e-47 |
| MsG0380014103.01 | MsG0680031264.01 | 0.802057 | 6.721210e-49 | 3.260583e-46 |
| MsG0380014221.01 | MsG0680031264.01 | 0.877915 | 4.283105e-69 | 2.192955e-65 |
| MsG0380014225.01 | MsG0680031264.01 | -0.858091 | 1.044920e-62 | 2.636098e-59 |
| MsG0680030882.01 | MsG0680031264.01 | 0.811408 | 7.106368e-51 | 4.395546e-48 |
| MsG0680031263.01 | MsG0680031264.01 | 0.912055 | 3.017630e-83 | 6.657368e-79 |
| MsG0680031264.01 | MsG0680031344.01 | 0.826953 | 2.043509e-54 | 1.945109e-51 |
| MsG0680031264.01 | MsG0680031621.01 | 0.898734 | 3.966896e-77 | 4.751577e-73 |
| MsG0680031264.01 | MsG0680031702.01 | 0.815496 | 8.972915e-52 | 6.196640e-49 |
| MsG0680031264.01 | MsG0680031708.01 | 0.835858 | 1.313317e-56 | 1.626336e-53 |
| MsG0680031264.01 | MsG0680031939.01 | 0.819411 | 1.177927e-52 | 9.057530e-50 |
| MsG0680031264.01 | MsG0680032771.01 | 0.816068 | 6.689493e-52 | 4.692571e-49 |
| MsG0680031264.01 | MsG0680034230.01 | 0.808909 | 2.456922e-50 | 1.422205e-47 |
| MsG0680031264.01 | MsG0680034739.01 | 0.812208 | 4.759453e-51 | 3.007540e-48 |
| MsG0680031264.01 | MsG0680035580.01 | 0.801938 | 7.111243e-49 | 3.439232e-46 |
| MsG0680031264.01 | MsG0780036593.01 | 0.826075 | 3.310476e-54 | 3.072540e-51 |
| MsG0680031264.01 | MsG0780036602.01 | 0.831656 | 1.475356e-55 | 1.611404e-52 |
| MsG0680031264.01 | MsG0780036659.01 | 0.826337 | 2.867875e-54 | 2.681859e-51 |
| MsG0680031264.01 | MsG0780036766.01 | 0.807907 | 4.019143e-50 | 2.265960e-47 |
| MsG0680031264.01 | MsG0780036979.01 | 0.822714 | 2.043778e-53 | 1.724146e-50 |
| MsG0680031264.01 | MsG0780037054.01 | 0.814464 | 1.520101e-51 | 1.020728e-48 |
| MsG0680031264.01 | MsG0780038377.01 | 0.823140 | 1.626171e-53 | 1.388548e-50 |
| MsG0680031264.01 | MsG0780038907.01 | 0.854830 | 9.477711e-62 | 2.144384e-58 |
| MsG0680031264.01 | MsG0780039139.01 | 0.800835 | 1.196103e-48 | 5.625816e-46 |
| MsG0680031264.01 | MsG0780039170.01 | 0.830065 | 3.622992e-55 | 3.775983e-52 |
| MsG0680031264.01 | MsG0780039369.01 | 0.813540 | 2.431157e-51 | 1.592075e-48 |
| MsG0680031264.01 | MsG0780039443.01 | 0.803861 | 2.848459e-49 | 1.447090e-46 |
| MsG0680031264.01 | MsG0780039940.01 | 0.904207 | 1.561891e-79 | 2.390939e-75 |
| MsG0680031264.01 | MsG0780040430.01 | 0.852051 | 5.946722e-61 | 1.227421e-57 |
| MsG0680031264.01 | MsG0780040431.01 | 0.828900 | 6.952369e-55 | 7.003347e-52 |
| MsG0680031264.01 | MsG0780040888.01 | 0.829893 | 3.988274e-55 | 4.136783e-52 |
| MsG0680031264.01 | MsG0780041416.01 | 0.803758 | 2.991442e-49 | 1.515726e-46 |
| MsG0680031264.01 | MsG0780041440.01 | 0.842527 | 2.449323e-58 | 3.724228e-55 |
| MsG0680031264.01 | MsG0780041673.01 | 0.811741 | 6.017000e-51 | 3.754422e-48 |
| MsG0680031264.01 | MsG0880041861.01 | 0.817351 | 3.449920e-52 | 2.506359e-49 |
| MsG0680031264.01 | MsG0880041897.01 | 0.822254 | 2.614348e-53 | 2.176705e-50 |
| MsG0680031264.01 | MsG0880042324.01 | 0.804324 | 2.281217e-49 | 1.172759e-46 |
| MsG0680031264.01 | MsG0880043037.01 | 0.807107 | 5.941368e-50 | 3.280718e-47 |
| MsG0680031264.01 | MsG0880043157.01 | 0.801926 | 7.149717e-49 | 3.456885e-46 |
| MsG0680031264.01 | MsG0880044611.01 | -0.808544 | 2.939655e-50 | 1.685494e-47 |
| MsG0680031264.01 | MsG0880045111.01 | 0.804914 | 1.718454e-49 | 8.970742e-47 |
| MsG0680031264.01 | MsG0880045162.01 | 0.819478 | 1.137138e-52 | 8.760737e-50 |
| MsG0680031264.01 | MsG0880045164.01 | 0.868876 | 4.713918e-66 | 1.732731e-62 |
| MsG0680031264.01 | MsG0880045362.01 | 0.807867 | 4.098776e-50 | 2.308477e-47 |
| MsG0680031264.01 | MsG0880045735.01 | 0.885941 | 5.266048e-72 | 3.685597e-68 |
| MsG0680031264.01 | MsG0880045765.01 | 0.803062 | 4.170337e-49 | 2.075461e-46 |
| MsG0680031264.01 | MsG0880046004.01 | 0.852000 | 6.151587e-61 | 1.267382e-57 |
| MsG0680031264.01 | MsG0880046421.01 | 0.857693 | 1.371324e-62 | 3.413873e-59 |
| MsG0680031264.01 | MsG0880046457.01 | 0.801264 | 9.773499e-49 | 4.647094e-46 |
| MsG0680031264.01 | MsG0880046516.01 | 0.816923 | 4.305682e-52 | 3.091734e-49 |
| MsG0680031264.01 | MsG0880046724.01 | 0.822875 | 1.874843e-53 | 1.588845e-50 |
| MsG0680031264.01 | MsG0880046790.01 | 0.807566 | 4.747743e-50 | 2.653119e-47 |
| MsG0680031264.01 | MsG0880046820.01 | 0.822245 | 2.626212e-53 | 2.186040e-50 |
| MsG0680031264.01 | MsG0880047055.01 | -0.802638 | 5.101450e-49 | 2.511682e-46 |
| MsG0680031264.01 | MsG0880047063.01 | 0.837137 | 6.205456e-57 | 7.986354e-54 |
| MsG0680031264.01 | MsG0880047135.01 | 0.848779 | 4.931643e-60 | 9.151389e-57 |
| MsG0680031264.01 | MsG0880047394.01 | 0.801126 | 1.043256e-48 | 4.943282e-46 |
| MsG0680031264.01 | MsG0880047473.01 | 0.806283 | 8.868818e-50 | 4.794744e-47 |
| MsG0680031264.01 | MsG0880047754.01 | 0.814351 | 1.610226e-51 | 1.077905e-48 |
| MsG0680031264.01 | MsG0880047764.01 | 0.854059 | 1.583177e-61 | 3.492693e-58 |
| MsG0480018653.01 | MsG0680031264.01 | 0.802179 | 6.343392e-49 | 3.086772e-46 |
| MsG0480018883.01 | MsG0680031264.01 | 0.802817 | 4.685673e-49 | 2.317697e-46 |
| MsG0480018911.01 | MsG0680031264.01 | 0.801272 | 9.736630e-49 | 4.630505e-46 |
| MsG0480019148.01 | MsG0680031264.01 | 0.829883 | 4.011317e-55 | 4.159535e-52 |
| MsG0480019206.01 | MsG0680031264.01 | 0.813076 | 3.074138e-51 | 1.987761e-48 |
| MsG0480019711.01 | MsG0680031264.01 | 0.812597 | 3.912668e-51 | 2.498191e-48 |
| MsG0480020765.01 | MsG0680031264.01 | 0.803456 | 3.456798e-49 | 1.737891e-46 |
| MsG0480020935.01 | MsG0680031264.01 | -0.811320 | 7.426017e-51 | 4.582249e-48 |
| MsG0480021056.01 | MsG0680031264.01 | 0.874086 | 8.886227e-68 | 3.947271e-64 |
| MsG0480021189.01 | MsG0680031264.01 | 0.807171 | 5.758610e-50 | 3.185227e-47 |
| MsG0480022054.01 | MsG0680031264.01 | 0.846451 | 2.153703e-59 | 3.708992e-56 |
| MsG0480022711.01 | MsG0680031264.01 | 0.809490 | 1.843833e-50 | 1.084061e-47 |
| MsG0480023055.01 | MsG0680031264.01 | 0.808792 | 2.602426e-50 | 1.501782e-47 |
| MsG0480023138.01 | MsG0680031264.01 | 0.841501 | 4.574110e-58 | 6.734348e-55 |
| MsG0480023150.01 | MsG0680031264.01 | 0.802747 | 4.843735e-49 | 2.391521e-46 |
| MsG0480023489.01 | MsG0680031264.01 | 0.824054 | 9.937679e-54 | 8.706044e-51 |
| MsG0480023601.01 | MsG0680031264.01 | 0.806567 | 7.726689e-50 | 4.207692e-47 |
| MsG0580024197.01 | MsG0680031264.01 | 0.824801 | 6.629285e-54 | 5.934341e-51 |
| MsG0580024790.01 | MsG0680031264.01 | -0.832738 | 7.965223e-56 | 8.982804e-53 |
| MsG0580024952.01 | MsG0680031264.01 | 0.890823 | 6.953485e-74 | 5.941642e-70 |
| MsG0580025053.01 | MsG0680031264.01 | 0.886404 | 3.523257e-72 | 2.513360e-68 |
| MsG0580025332.01 | MsG0680031264.01 | 0.806160 | 9.415640e-50 | 5.074590e-47 |
| MsG0580025369.01 | MsG0680031264.01 | -0.838706 | 2.452662e-57 | 3.312317e-54 |
| MsG0580025407.01 | MsG0680031264.01 | -0.813160 | 2.945665e-51 | 1.909003e-48 |
| MsG0580025612.01 | MsG0680031264.01 | 0.816453 | 5.488352e-52 | 3.890244e-49 |
| MsG0580025661.01 | MsG0680031264.01 | 0.822033 | 2.941149e-53 | 2.433347e-50 |
| MsG0580025987.01 | MsG0680031264.01 | 0.803233 | 3.844425e-49 | 1.921708e-46 |
| MsG0380014948.01 | MsG0680031264.01 | 0.801279 | 9.707085e-49 | 4.617213e-46 |
| MsG0380016347.01 | MsG0680031264.01 | -0.817699 | 2.880501e-52 | 2.112747e-49 |
| MsG0380017293.01 | MsG0680031264.01 | 0.800165 | 1.637934e-48 | 7.573714e-46 |
| MsG0380017893.01 | MsG0680031264.01 | 0.838016 | 3.694517e-57 | 4.885697e-54 |
| MsG0380017931.01 | MsG0680031264.01 | 0.802229 | 6.195940e-49 | 3.018884e-46 |
| MsG0580026086.01 | MsG0680031264.01 | 0.828771 | 7.469652e-55 | 7.496209e-52 |
| MsG0580027655.01 | MsG0680031264.01 | 0.809040 | 2.303449e-50 | 1.338084e-47 |
| MsG0580027925.01 | MsG0680031264.01 | 0.803895 | 2.801559e-49 | 1.424577e-46 |
| MsG0580027980.01 | MsG0680031264.01 | 0.820697 | 5.981074e-53 | 4.766508e-50 |
| MsG0580028407.01 | MsG0680031264.01 | 0.901314 | 3.037831e-78 | 4.081344e-74 |
| MsG0580028613.01 | MsG0680031264.01 | -0.800968 | 1.123610e-48 | 5.302914e-46 |
| MsG0580028630.01 | MsG0680031264.01 | 0.805796 | 1.122752e-49 | 5.995012e-47 |
| MsG0580029236.01 | MsG0680031264.01 | 0.844713 | 6.373520e-59 | 1.037913e-55 |
| MsG0580029596.01 | MsG0680031264.01 | 0.806613 | 7.554964e-50 | 4.118914e-47 |
| MsG0580029736.01 | MsG0680031264.01 | 0.844644 | 6.655390e-59 | 1.081427e-55 |
| MsG0680030413.01 | MsG0680031264.01 | 0.823107 | 1.654974e-53 | 1.411808e-50 |
| MsG0680030616.01 | MsG0680031264.01 | 0.803689 | 3.091900e-49 | 1.563812e-46 |
| MsG0280006592.01 | MsG0680031264.01 | 0.843174 | 1.647660e-58 | 2.556293e-55 |
| MsG0280006593.01 | MsG0680031264.01 | 0.805242 | 1.467472e-49 | 7.724509e-47 |
| MsG0280006601.01 | MsG0680031264.01 | 0.823328 | 1.469287e-53 | 1.261125e-50 |
| MsG0280007062.01 | MsG0680031264.01 | 0.811502 | 6.781548e-51 | 4.205070e-48 |
| MsG0280007506.01 | MsG0680031264.01 | 0.801522 | 8.652821e-49 | 4.141119e-46 |
| MsG0280007575.01 | MsG0680031264.01 | 0.821638 | 3.629331e-53 | 2.969268e-50 |
| MsG0280007955.01 | MsG0680031264.01 | 0.835734 | 1.412394e-56 | 1.742605e-53 |
| MsG0280008106.01 | MsG0680031264.01 | 0.800212 | 1.602064e-48 | 7.417010e-46 |
| MsG0280008112.01 | MsG0680031264.01 | 0.801555 | 8.520518e-49 | 4.081059e-46 |
| MsG0280008390.01 | MsG0680031264.01 | 0.828493 | 8.717265e-55 | 8.678845e-52 |
| MsG0280008660.01 | MsG0680031264.01 | -0.801562 | 8.494088e-49 | 4.069070e-46 |
| MsG0280008899.01 | MsG0680031264.01 | 0.816513 | 5.320964e-52 | 3.777973e-49 |
| MsG0280008928.01 | MsG0680031264.01 | 0.803756 | 2.995210e-49 | 1.517525e-46 |
| MsG0280009421.01 | MsG0680031264.01 | 0.825355 | 4.905362e-54 | 4.460429e-51 |
| MsG0280010058.01 | MsG0680031264.01 | 0.802749 | 4.839404e-49 | 2.389540e-46 |
| MsG0280010284.01 | MsG0680031264.01 | 0.826578 | 2.511691e-54 | 2.364792e-51 |
| MsG0280010290.01 | MsG0680031264.01 | 0.837849 | 4.076758e-57 | 5.363428e-54 |
| MsG0280010366.01 | MsG0680031264.01 | 0.821893 | 3.169745e-53 | 2.612175e-50 |
| MsG0280010517.01 | MsG0680031264.01 | 0.808099 | 3.657782e-50 | 2.072850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680031264.01.T01 | MTR_8g077830 | 93.782 | 193 | 11 | 1 | 6 | 198 | 282 | 473 | 6.04e-116 | 338 |
| MsG0680031264.01.T01 | MTR_5g019950 | 78.333 | 180 | 38 | 1 | 14 | 192 | 291 | 470 | 8.48e-72 | 225 |
| MsG0680031264.01.T01 | MTR_3g109950 | 65.000 | 180 | 62 | 1 | 15 | 193 | 290 | 469 | 1.09e-70 | 222 |
| MsG0680031264.01.T01 | MTR_8g088080 | 67.403 | 181 | 58 | 1 | 14 | 193 | 296 | 476 | 1.32e-59 | 193 |
| MsG0680031264.01.T01 | MTR_8g088070 | 63.889 | 180 | 64 | 1 | 14 | 192 | 291 | 470 | 3.77e-58 | 189 |
| MsG0680031264.01.T01 | MTR_3g109950 | 64.935 | 154 | 53 | 1 | 15 | 167 | 290 | 443 | 2.99e-55 | 182 |
| MsG0680031264.01.T01 | MTR_5g019970 | 84.466 | 103 | 16 | 0 | 88 | 190 | 6 | 108 | 2.25e-49 | 156 |
| MsG0680031264.01.T01 | MTR_1g026910 | 49.721 | 179 | 89 | 1 | 14 | 191 | 278 | 456 | 1.60e-48 | 164 |
| MsG0680031264.01.T01 | MTR_7g103300 | 47.594 | 187 | 91 | 1 | 11 | 190 | 183 | 369 | 1.35e-37 | 134 |
| MsG0680031264.01.T01 | MTR_7g103300 | 47.594 | 187 | 91 | 1 | 11 | 190 | 225 | 411 | 2.97e-37 | 134 |
| MsG0680031264.01.T01 | MTR_7g103300 | 47.594 | 187 | 91 | 1 | 11 | 190 | 273 | 459 | 5.32e-37 | 134 |
| MsG0680031264.01.T01 | MTR_1g026910 | 49.677 | 155 | 77 | 1 | 14 | 167 | 278 | 432 | 6.88e-36 | 130 |
| MsG0680031264.01.T01 | MTR_3g109950 | 61.111 | 108 | 41 | 1 | 15 | 121 | 290 | 397 | 4.39e-31 | 117 |
| MsG0680031264.01.T01 | MTR_7g103300 | 49.390 | 164 | 76 | 1 | 11 | 167 | 273 | 436 | 3.02e-30 | 115 |
| MsG0680031264.01.T01 | MTR_1g061710 | 52.941 | 102 | 48 | 0 | 89 | 190 | 427 | 528 | 3.38e-28 | 110 |
| MsG0680031264.01.T01 | MTR_3g110012 | 47.863 | 117 | 38 | 2 | 26 | 119 | 27 | 143 | 1.26e-18 | 79.0 |
| MsG0680031264.01.T01 | MTR_3g109980 | 47.863 | 117 | 38 | 2 | 26 | 119 | 27 | 143 | 1.26e-18 | 79.0 |
| MsG0680031264.01.T01 | MTR_2g010740 | 38.346 | 133 | 82 | 0 | 58 | 190 | 334 | 466 | 3.50e-16 | 76.3 |
| MsG0680031264.01.T01 | MTR_7g103300 | 46.667 | 120 | 57 | 1 | 11 | 123 | 273 | 392 | 3.59e-15 | 73.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680031264.01.T01 | AT2G25737 | 63.536 | 181 | 65 | 1 | 14 | 193 | 295 | 475 | 1.35e-68 | 217 |
| MsG0680031264.01.T01 | AT2G36630 | 44.845 | 194 | 98 | 3 | 5 | 190 | 264 | 456 | 3.25e-33 | 124 |
| MsG0680031264.01.T01 | AT1G11540 | 39.130 | 115 | 70 | 0 | 76 | 190 | 253 | 367 | 6.80e-17 | 78.2 |
| MsG0680031264.01.T01 | AT1G11540 | 39.130 | 115 | 70 | 0 | 76 | 190 | 336 | 450 | 1.62e-16 | 77.4 |
| MsG0680031264.01.T01 | AT1G61740 | 36.691 | 139 | 88 | 0 | 52 | 190 | 320 | 458 | 2.77e-15 | 73.6 |
| MsG0680031264.01.T01 | AT2G25737 | 54.545 | 77 | 34 | 1 | 14 | 89 | 295 | 371 | 8.64e-15 | 72.0 |
| MsG0680031264.01.T01 | AT4G21250 | 36.842 | 114 | 72 | 0 | 77 | 190 | 336 | 449 | 6.30e-13 | 67.0 |
| MsG0680031264.01.T01 | AT4G21260 | 35.345 | 116 | 71 | 2 | 77 | 190 | 280 | 393 | 5.93e-11 | 61.2 |
Find 49 sgRNAs with CRISPR-Local
Find 85 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTGTGCTATTTATCAATTTA+AGG | 0.127658 | 6:+17006015 | MsG0680031264.01.T01:CDS |
| TCTAGGAGGTGGCTTCATTT+TGG | 0.204042 | 6:+17006198 | MsG0680031264.01.T01:CDS |
| GATGGAAAATGAAGAATATA+TGG | 0.247767 | 6:+17007038 | MsG0680031264.01.T01:CDS |
| TGCAAGGTCTAACTGAAATT+TGG | 0.268814 | 6:+17005993 | MsG0680031264.01.T01:CDS |
| ATATATTGCACTTCAAACTA+TGG | 0.315520 | 6:-17007342 | None:intergenic |
| AGAAAGATAATTGCTATCTT+TGG | 0.319840 | 6:+17006769 | MsG0680031264.01.T01:CDS |
| TAAACGGTATGTTACATAAT+TGG | 0.337245 | 6:-17007316 | None:intergenic |
| AGTTCCTTTGCATAAGCATA+TGG | 0.364228 | 6:-17006071 | None:intergenic |
| TGTTTCTTACCATAGGGTAC+TGG | 0.386212 | 6:-17006585 | None:intergenic |
| ATCACAGGTGGGGTGGGAAT+AGG | 0.390427 | 6:+17007000 | MsG0680031264.01.T01:intron |
| GTTAGTGGTTTGCTTGGTCT+AGG | 0.405722 | 6:+17006181 | MsG0680031264.01.T01:CDS |
| TTTGTGAGCGCAATCAGTTT+AGG | 0.416463 | 6:+17006832 | MsG0680031264.01.T01:CDS |
| AGTGTAACAGAAATTGCAAT+AGG | 0.433950 | 6:-17006040 | None:intergenic |
| ATAATAGCTGGTATGGTTAG+TGG | 0.442928 | 6:+17006166 | MsG0680031264.01.T01:CDS |
| AGGCAACATGGTTGAGAAGA+TGG | 0.444124 | 6:+17007020 | MsG0680031264.01.T01:CDS |
| CTTCAAACTATGGTCATAAA+CGG | 0.445809 | 6:-17007332 | None:intergenic |
| ATGGAAAATGAAGAATATAT+GGG | 0.453528 | 6:+17007039 | MsG0680031264.01.T01:CDS |
| GCAACCATAGCTGCATTAAC+CGG | 0.462747 | 6:+17006733 | MsG0680031264.01.T01:CDS |
| GGTTTGCTTGGTCTAGGAGG+TGG | 0.469170 | 6:+17006187 | MsG0680031264.01.T01:CDS |
| GGAATTGGGAATTCCTCCTC+AGG | 0.483527 | 6:+17006234 | MsG0680031264.01.T01:CDS |
| CTGTGGAATAATAGCTGGTA+TGG | 0.485082 | 6:+17006159 | MsG0680031264.01.T01:CDS |
| AACTAGAGTAATTGCATCAA+GGG | 0.487063 | 6:+17006090 | MsG0680031264.01.T01:CDS |
| TGCTTCTGTGGAATAATAGC+TGG | 0.491856 | 6:+17006154 | MsG0680031264.01.T01:CDS |
| TTGGCTATCACAGGTGGGGT+GGG | 0.492087 | 6:+17006994 | MsG0680031264.01.T01:intron |
| TTTGGCTATCACAGGTGGGG+TGG | 0.493274 | 6:+17006993 | MsG0680031264.01.T01:intron |
| CTTTCTCACCACATGTTGGC+CGG | 0.494055 | 6:-17006752 | None:intergenic |
| GGTATGGTTAGTGGTTTGCT+TGG | 0.496243 | 6:+17006175 | MsG0680031264.01.T01:CDS |
| GCAGATTGTGTAACAATGAC+TGG | 0.507617 | 6:+17007205 | MsG0680031264.01.T01:three_prime_UTR |
| GAACTAGAGTAATTGCATCA+AGG | 0.511872 | 6:+17006089 | MsG0680031264.01.T01:CDS |
| ATCTGTCTTTACTGCTTCTG+TGG | 0.513821 | 6:+17006142 | MsG0680031264.01.T01:CDS |
| CAAGGGGAAAGGAAATCACT+TGG | 0.523181 | 6:+17006107 | MsG0680031264.01.T01:CDS |
| GTTTCTTACCATAGGGTACT+GGG | 0.530425 | 6:-17006584 | None:intergenic |
| GATCGCTTCCCAGTACCCTA+TGG | 0.534547 | 6:+17006576 | MsG0680031264.01.T01:CDS |
| TTTCTCTTCCTCCATGTCAG+TGG | 0.546653 | 6:+17006536 | MsG0680031264.01.T01:CDS |
| AATATGTAGAAAATTTAGAA+AGG | 0.559766 | 6:-17007170 | None:intergenic |
| AGTGGTTTGCTTGGTCTAGG+AGG | 0.560215 | 6:+17006184 | MsG0680031264.01.T01:CDS |
| AGTAATTGCATCAAGGGGAA+AGG | 0.574209 | 6:+17006096 | MsG0680031264.01.T01:CDS |
| TGCATTAACCGGCCAACATG+TGG | 0.574265 | 6:+17006744 | MsG0680031264.01.T01:CDS |
| GAAGCCATATGCTTATGCAA+AGG | 0.580245 | 6:+17006067 | MsG0680031264.01.T01:CDS |
| TTGGCCGGTTAATGCAGCTA+TGG | 0.591965 | 6:-17006737 | None:intergenic |
| CATAAAACTATTTCTATGCA+AGG | 0.604509 | 6:+17005977 | None:intergenic |
| TGGAAAATGAAGAATATATG+GGG | 0.615202 | 6:+17007040 | MsG0680031264.01.T01:CDS |
| TTATCTTTCTCACCACATGT+TGG | 0.621904 | 6:-17006756 | None:intergenic |
| GAATGAGTTTGTACCTGAGG+AGG | 0.622331 | 6:-17006247 | None:intergenic |
| ATAATATTGTACCACTGACA+TGG | 0.629151 | 6:-17006547 | None:intergenic |
| ACTAGAGTAATTGCATCAAG+GGG | 0.654446 | 6:+17006091 | MsG0680031264.01.T01:CDS |
| TTTGACAATCTCTGCCACCA+TGG | 0.655124 | 6:+17007063 | MsG0680031264.01.T01:CDS |
| TGGGGTGGGAATAGGCAACA+TGG | 0.656926 | 6:+17007008 | MsG0680031264.01.T01:CDS |
| ATATTGTACCACTGACATGG+AGG | 0.737557 | 6:-17006544 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATGTAGAAAATTTAGAA+AGG | - | Chr6:17007173-17007192 | None:intergenic | 15.0% |
| !! | ATATCTTAAAAAAAACTGAA+AGG | - | Chr6:17006454-17006473 | None:intergenic | 15.0% |
| !! | TATCTTAAAAAAAACTGAAA+GGG | - | Chr6:17006453-17006472 | None:intergenic | 15.0% |
| !! | TTAAACTTTCTATCATAAAT+GGG | - | Chr6:17006915-17006934 | None:intergenic | 15.0% |
| !!! | ACATAAAAACAATTTTAAGA+TGG | - | Chr6:17007244-17007263 | None:intergenic | 15.0% |
| !!! | AGTAAGGATAAAATTTATTT+TGG | + | Chr6:17006941-17006960 | MsG0680031264.01.T01:intron | 15.0% |
| !!! | TAAATTTTATCCTTACTTTA+TGG | - | Chr6:17006938-17006957 | None:intergenic | 15.0% |
| !! | ATGGAAAATGAAGAATATAT+GGG | + | Chr6:17007039-17007058 | MsG0680031264.01.T01:CDS | 20.0% |
| !! | GTTAAACTTTCTATCATAAA+TGG | - | Chr6:17006916-17006935 | None:intergenic | 20.0% |
| !!! | ATATATTGTTTCTTACCATA+GGG | - | Chr6:17006594-17006613 | None:intergenic | 20.0% |
| !!! | TATATATTGTTTCTTACCAT+AGG | - | Chr6:17006595-17006614 | None:intergenic | 20.0% |
| !!! | TGTTTTTATGTGTTTTTGTT+TGG | + | Chr6:17007253-17007272 | MsG0680031264.01.T01:three_prime_UTR | 20.0% |
| !!! | TTGATGAATATTTTTGAATG+TGG | + | Chr6:17006478-17006497 | MsG0680031264.01.T01:intron | 20.0% |
| ! | AGAAAGATAATTGCTATCTT+TGG | + | Chr6:17006769-17006788 | MsG0680031264.01.T01:CDS | 25.0% |
| ! | ATATATTGCACTTCAAACTA+TGG | - | Chr6:17007345-17007364 | None:intergenic | 25.0% |
| ! | CTCAATCGAATATATTAATG+AGG | + | Chr6:17006318-17006337 | MsG0680031264.01.T01:intron | 25.0% |
| ! | GAAAGTTTAACCATAAAGTA+AGG | + | Chr6:17006925-17006944 | MsG0680031264.01.T01:intron | 25.0% |
| ! | GAATGTAGATATGATGATAT+TGG | + | Chr6:17006618-17006637 | MsG0680031264.01.T01:intron | 25.0% |
| ! | GATGGAAAATGAAGAATATA+TGG | + | Chr6:17007038-17007057 | MsG0680031264.01.T01:CDS | 25.0% |
| ! | TAAACGGTATGTTACATAAT+TGG | - | Chr6:17007319-17007338 | None:intergenic | 25.0% |
| ! | TGGAAAATGAAGAATATATG+GGG | + | Chr6:17007040-17007059 | MsG0680031264.01.T01:CDS | 25.0% |
| !! | TAGTAACAATGTCTCATTTT+TGG | + | Chr6:17006975-17006994 | MsG0680031264.01.T01:intron | 25.0% |
| !!! | ATTATTTTACAACTGTTTCG+AGG | - | Chr6:17006401-17006420 | None:intergenic | 25.0% |
| !!! | GTGTGCTATTTATCAATTTA+AGG | + | Chr6:17006015-17006034 | MsG0680031264.01.T01:CDS | 25.0% |
| !!! | TGAATATTTTTGAATGTGGT+AGG | + | Chr6:17006482-17006501 | MsG0680031264.01.T01:intron | 25.0% |
| AACTAGAGTAATTGCATCAA+GGG | + | Chr6:17006090-17006109 | MsG0680031264.01.T01:CDS | 30.0% | |
| AACTTTCTATCATAAATGGG+TGG | - | Chr6:17006912-17006931 | None:intergenic | 30.0% | |
| AGTGTAACAGAAATTGCAAT+AGG | - | Chr6:17006043-17006062 | None:intergenic | 30.0% | |
| ATAATATTGTACCACTGACA+TGG | - | Chr6:17006550-17006569 | None:intergenic | 30.0% | |
| ATTCCCAATTCCAAAAACAA+TGG | - | Chr6:17006226-17006245 | None:intergenic | 30.0% | |
| CGAATATATTAATGAGGTCT+CGG | + | Chr6:17006324-17006343 | MsG0680031264.01.T01:intron | 30.0% | |
| CTTCAAACTATGGTCATAAA+CGG | - | Chr6:17007335-17007354 | None:intergenic | 30.0% | |
| !! | TGCTACATCAACTTTTTCTA+TGG | + | Chr6:17006512-17006531 | MsG0680031264.01.T01:CDS | 30.0% |
| !!! | AAACCCCAAATTTTTTTCCA+TGG | - | Chr6:17007083-17007102 | None:intergenic | 30.0% |
| AATGAATGAGTTTGTACCTG+AGG | - | Chr6:17006253-17006272 | None:intergenic | 35.0% | |
| ACTAGAGTAATTGCATCAAG+GGG | + | Chr6:17006091-17006110 | MsG0680031264.01.T01:CDS | 35.0% | |
| AGTTCCTTTGCATAAGCATA+TGG | - | Chr6:17006074-17006093 | None:intergenic | 35.0% | |
| ATAATAGCTGGTATGGTTAG+TGG | + | Chr6:17006166-17006185 | MsG0680031264.01.T01:CDS | 35.0% | |
| CCACCATGGAAAAAAATTTG+GGG | + | Chr6:17007077-17007096 | MsG0680031264.01.T01:CDS | 35.0% | |
| GAACTAGAGTAATTGCATCA+AGG | + | Chr6:17006089-17006108 | MsG0680031264.01.T01:CDS | 35.0% | |
| GCCACCATGGAAAAAAATTT+GGG | + | Chr6:17007076-17007095 | MsG0680031264.01.T01:CDS | 35.0% | |
| TGCAAGGTCTAACTGAAATT+TGG | + | Chr6:17005993-17006012 | MsG0680031264.01.T01:CDS | 35.0% | |
| TGCCACCATGGAAAAAAATT+TGG | + | Chr6:17007075-17007094 | MsG0680031264.01.T01:CDS | 35.0% | |
| TTAATGAGGTCTCGGTTTAA+TGG | + | Chr6:17006332-17006351 | MsG0680031264.01.T01:intron | 35.0% | |
| TTATCTTTCTCACCACATGT+TGG | - | Chr6:17006759-17006778 | None:intergenic | 35.0% | |
| !!! | CATTTTGGGACCATTGTTTT+TGG | + | Chr6:17006213-17006232 | MsG0680031264.01.T01:CDS | 35.0% |
| !!! | GGACCATTGTTTTTGGAATT+GGG | + | Chr6:17006220-17006239 | MsG0680031264.01.T01:CDS | 35.0% |
| ACTGATTGCGCTCACAAAAA+TGG | - | Chr6:17006830-17006849 | None:intergenic | 40.0% | |
| AGTAATTGCATCAAGGGGAA+AGG | + | Chr6:17006096-17006115 | MsG0680031264.01.T01:CDS | 40.0% | |
| ATATTGTACCACTGACATGG+AGG | - | Chr6:17006547-17006566 | None:intergenic | 40.0% | |
| ATCTGTCTTTACTGCTTCTG+TGG | + | Chr6:17006142-17006161 | MsG0680031264.01.T01:CDS | 40.0% | |
| CTGTGGAATAATAGCTGGTA+TGG | + | Chr6:17006159-17006178 | MsG0680031264.01.T01:CDS | 40.0% | |
| GAAGCCATATGCTTATGCAA+AGG | + | Chr6:17006067-17006086 | MsG0680031264.01.T01:CDS | 40.0% | |
| GCAGATTGTGTAACAATGAC+TGG | + | Chr6:17007205-17007224 | MsG0680031264.01.T01:three_prime_UTR | 40.0% | |
| TGCTTCTGTGGAATAATAGC+TGG | + | Chr6:17006154-17006173 | MsG0680031264.01.T01:CDS | 40.0% | |
| TGTTTCTTACCATAGGGTAC+TGG | - | Chr6:17006588-17006607 | None:intergenic | 40.0% | |
| TTTGTGAGCGCAATCAGTTT+AGG | + | Chr6:17006832-17006851 | MsG0680031264.01.T01:CDS | 40.0% | |
| ! | GTTTCTTACCATAGGGTACT+GGG | - | Chr6:17006587-17006606 | None:intergenic | 40.0% |
| !!! | ATTTTTGGCTATCACAGGTG+GGG | + | Chr6:17006990-17007009 | MsG0680031264.01.T01:intron | 40.0% |
| !!! | CATTTTTGGCTATCACAGGT+GGG | + | Chr6:17006989-17007008 | MsG0680031264.01.T01:intron | 40.0% |
| !!! | CCCCAAATTTTTTTCCATGG+TGG | - | Chr6:17007080-17007099 | None:intergenic | 40.0% |
| !!! | GGGACCATTGTTTTTGGAAT+TGG | + | Chr6:17006219-17006238 | MsG0680031264.01.T01:CDS | 40.0% |
| !!! | GTCTCATTTTTGGCTATCAC+AGG | + | Chr6:17006985-17007004 | MsG0680031264.01.T01:intron | 40.0% |
| !!! | TCATTTTTGGCTATCACAGG+TGG | + | Chr6:17006988-17007007 | MsG0680031264.01.T01:intron | 40.0% |
| AGGCAACATGGTTGAGAAGA+TGG | + | Chr6:17007020-17007039 | MsG0680031264.01.T01:CDS | 45.0% | |
| CAAGGGGAAAGGAAATCACT+TGG | + | Chr6:17006107-17006126 | MsG0680031264.01.T01:CDS | 45.0% | |
| GAATGAGTTTGTACCTGAGG+AGG | - | Chr6:17006250-17006269 | None:intergenic | 45.0% | |
| GCAACCATAGCTGCATTAAC+CGG | + | Chr6:17006733-17006752 | MsG0680031264.01.T01:CDS | 45.0% | |
| TTTCTCTTCCTCCATGTCAG+TGG | + | Chr6:17006536-17006555 | MsG0680031264.01.T01:CDS | 45.0% | |
| TTTGACAATCTCTGCCACCA+TGG | + | Chr6:17007063-17007082 | MsG0680031264.01.T01:CDS | 45.0% | |
| ! | CTAGGAGGTGGCTTCATTTT+GGG | + | Chr6:17006199-17006218 | MsG0680031264.01.T01:CDS | 45.0% |
| ! | TCTAGGAGGTGGCTTCATTT+TGG | + | Chr6:17006198-17006217 | MsG0680031264.01.T01:CDS | 45.0% |
| !! | GGTATGGTTAGTGGTTTGCT+TGG | + | Chr6:17006175-17006194 | MsG0680031264.01.T01:CDS | 45.0% |
| !! | GTTAGTGGTTTGCTTGGTCT+AGG | + | Chr6:17006181-17006200 | MsG0680031264.01.T01:CDS | 45.0% |
| CTTTCTCACCACATGTTGGC+CGG | - | Chr6:17006755-17006774 | None:intergenic | 50.0% | |
| GGAATTGGGAATTCCTCCTC+AGG | + | Chr6:17006234-17006253 | MsG0680031264.01.T01:CDS | 50.0% | |
| TGCATTAACCGGCCAACATG+TGG | + | Chr6:17006744-17006763 | MsG0680031264.01.T01:CDS | 50.0% | |
| TTGGCCGGTTAATGCAGCTA+TGG | - | Chr6:17006740-17006759 | None:intergenic | 50.0% | |
| !! | AGTGGTTTGCTTGGTCTAGG+AGG | + | Chr6:17006184-17006203 | MsG0680031264.01.T01:CDS | 50.0% |
| ATCACAGGTGGGGTGGGAAT+AGG | + | Chr6:17007000-17007019 | MsG0680031264.01.T01:intron | 55.0% | |
| GATCGCTTCCCAGTACCCTA+TGG | + | Chr6:17006576-17006595 | MsG0680031264.01.T01:CDS | 55.0% | |
| TGGGGTGGGAATAGGCAACA+TGG | + | Chr6:17007008-17007027 | MsG0680031264.01.T01:CDS | 55.0% | |
| TTGGCTATCACAGGTGGGGT+GGG | + | Chr6:17006994-17007013 | MsG0680031264.01.T01:intron | 55.0% | |
| TTTGGCTATCACAGGTGGGG+TGG | + | Chr6:17006993-17007012 | MsG0680031264.01.T01:intron | 55.0% | |
| ! | GGTTTGCTTGGTCTAGGAGG+TGG | + | Chr6:17006187-17006206 | MsG0680031264.01.T01:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr6 | gene | 17005992 | 17007375 | 17005992 | ID=MsG0680031264.01;Name=MsG0680031264.01 |
| Chr6 | mRNA | 17005992 | 17007375 | 17005992 | ID=MsG0680031264.01.T01;Parent=MsG0680031264.01;Name=MsG0680031264.01.T01;_AED=0.47;_eAED=0.47;_QI=0|1|0.75|1|1|1|4|271|198 |
| Chr6 | exon | 17005992 | 17006255 | 17005992 | ID=MsG0680031264.01.T01:exon:27748;Parent=MsG0680031264.01.T01 |
| Chr6 | exon | 17006504 | 17006597 | 17006504 | ID=MsG0680031264.01.T01:exon:27749;Parent=MsG0680031264.01.T01 |
| Chr6 | exon | 17006713 | 17006853 | 17006713 | ID=MsG0680031264.01.T01:exon:27750;Parent=MsG0680031264.01.T01 |
| Chr6 | exon | 17007007 | 17007375 | 17007007 | ID=MsG0680031264.01.T01:exon:27751;Parent=MsG0680031264.01.T01 |
| Chr6 | CDS | 17005992 | 17006255 | 17005992 | ID=MsG0680031264.01.T01:cds;Parent=MsG0680031264.01.T01 |
| Chr6 | CDS | 17006504 | 17006597 | 17006504 | ID=MsG0680031264.01.T01:cds;Parent=MsG0680031264.01.T01 |
| Chr6 | CDS | 17006713 | 17006853 | 17006713 | ID=MsG0680031264.01.T01:cds;Parent=MsG0680031264.01.T01 |
| Chr6 | CDS | 17007007 | 17007104 | 17007007 | ID=MsG0680031264.01.T01:cds;Parent=MsG0680031264.01.T01 |
| Chr6 | three_prime_UTR | 17007105 | 17007375 | 17007105 | ID=MsG0680031264.01.T01:three_prime_utr;Parent=MsG0680031264.01.T01 |
| Gene Sequence |
| Protein sequence |
