Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680031263.01.T01 | XP_003629468.2 | 81.07 | 243 | 7 | 1 | 1 | 204 | 1 | 243 | 2.39E-128 | 380 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680031263.01.T01 | Q8L7A0 | 72.789 | 147 | 40 | 0 | 48 | 194 | 53 | 199 | 1.66E-63 | 207 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680031263.01.T01 | G7LEU1 | 81.070 | 243 | 7 | 1 | 1 | 204 | 1 | 243 | 1.14e-128 | 380 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048660.01 | MsG0680031263.01 | 0.800741 | 1.250067e-48 | 5.865516e-46 |
| MsG0180000038.01 | MsG0680031263.01 | 0.805437 | 1.335589e-49 | 7.065738e-47 |
| MsG0180000404.01 | MsG0680031263.01 | 0.803309 | 3.707231e-49 | 1.856732e-46 |
| MsG0180000782.01 | MsG0680031263.01 | 0.823502 | 1.337901e-53 | 1.154126e-50 |
| MsG0180001002.01 | MsG0680031263.01 | 0.809694 | 1.667277e-50 | 9.856097e-48 |
| MsG0180001892.01 | MsG0680031263.01 | 0.818477 | 1.920528e-52 | 1.439195e-49 |
| MsG0180003403.01 | MsG0680031263.01 | 0.828236 | 1.005724e-54 | 9.937820e-52 |
| MsG0180003741.01 | MsG0680031263.01 | 0.830254 | 3.256601e-55 | 3.413104e-52 |
| MsG0180003951.01 | MsG0680031263.01 | 0.809443 | 1.887187e-50 | 1.108177e-47 |
| MsG0180004481.01 | MsG0680031263.01 | 0.801288 | 9.664818e-49 | 4.598155e-46 |
| MsG0180004493.01 | MsG0680031263.01 | 0.815290 | 9.970899e-52 | 6.846698e-49 |
| MsG0180004765.01 | MsG0680031263.01 | 0.820545 | 6.482745e-53 | 5.144656e-50 |
| MsG0180005113.01 | MsG0680031263.01 | 0.824503 | 7.793615e-54 | 6.915992e-51 |
| MsG0180005153.01 | MsG0680031263.01 | 0.842709 | 2.190487e-58 | 3.349309e-55 |
| MsG0180006017.01 | MsG0680031263.01 | 0.809398 | 1.930219e-50 | 1.132110e-47 |
| MsG0180006096.01 | MsG0680031263.01 | 0.807547 | 4.793247e-50 | 2.677266e-47 |
| MsG0180006134.01 | MsG0680031263.01 | 0.815179 | 1.055418e-51 | 7.224606e-49 |
| MsG0180006180.01 | MsG0680031263.01 | 0.822628 | 2.139457e-53 | 1.800660e-50 |
| MsG0280006360.01 | MsG0680031263.01 | 0.837251 | 5.805251e-57 | 7.496784e-54 |
| MsG0280010599.01 | MsG0680031263.01 | 0.813092 | 3.048947e-51 | 1.972295e-48 |
| MsG0280010788.01 | MsG0680031263.01 | 0.811656 | 6.276744e-51 | 3.907528e-48 |
| MsG0280011109.01 | MsG0680031263.01 | 0.814329 | 1.628336e-51 | 1.089399e-48 |
| MsG0280011329.01 | MsG0680031263.01 | 0.847126 | 1.408613e-59 | 2.479040e-56 |
| MsG0380014221.01 | MsG0680031263.01 | 0.893760 | 4.655895e-75 | 4.498523e-71 |
| MsG0380014225.01 | MsG0680031263.01 | -0.818872 | 1.562271e-52 | 1.183565e-49 |
| MsG0680031263.01 | MsG0680031264.01 | 0.912055 | 3.017630e-83 | 6.657368e-79 |
| MsG0680031263.01 | MsG0680031344.01 | 0.814820 | 1.267805e-51 | 8.594942e-49 |
| MsG0680031263.01 | MsG0680031428.01 | 0.819313 | 1.240099e-52 | 9.508978e-50 |
| MsG0680031263.01 | MsG0680031621.01 | 0.912245 | 2.428701e-83 | 5.414145e-79 |
| MsG0680031263.01 | MsG0680031702.01 | 0.804450 | 2.147298e-49 | 1.107487e-46 |
| MsG0680031263.01 | MsG0680031708.01 | 0.821759 | 3.403995e-53 | 2.794393e-50 |
| MsG0680031263.01 | MsG0680034739.01 | 0.808047 | 3.751547e-50 | 2.123043e-47 |
| MsG0680031263.01 | MsG0680035216.01 | 0.804241 | 2.374570e-49 | 1.218075e-46 |
| MsG0680031263.01 | MsG0680035580.01 | 0.803017 | 4.260729e-49 | 2.117987e-46 |
| MsG0680031263.01 | MsG0780036593.01 | 0.822684 | 2.076232e-53 | 1.750075e-50 |
| MsG0680031263.01 | MsG0780036602.01 | 0.831399 | 1.706142e-55 | 1.849300e-52 |
| MsG0680031263.01 | MsG0780036766.01 | 0.810804 | 9.604875e-51 | 5.846584e-48 |
| MsG0680031263.01 | MsG0780036979.01 | 0.810276 | 1.249468e-50 | 7.499310e-48 |
| MsG0680031263.01 | MsG0780038377.01 | 0.800523 | 1.385070e-48 | 6.463047e-46 |
| MsG0680031263.01 | MsG0780038907.01 | 0.839094 | 1.945774e-57 | 2.658913e-54 |
| MsG0680031263.01 | MsG0780039170.01 | 0.808662 | 2.774367e-50 | 1.595529e-47 |
| MsG0680031263.01 | MsG0780039443.01 | 0.815292 | 9.963225e-52 | 6.841691e-49 |
| MsG0680031263.01 | MsG0780039940.01 | 0.902789 | 6.769902e-79 | 9.747058e-75 |
| MsG0680031263.01 | MsG0780040430.01 | 0.876832 | 1.020431e-68 | 5.019989e-65 |
| MsG0680031263.01 | MsG0780040431.01 | 0.847464 | 1.137198e-59 | 2.023140e-56 |
| MsG0680031263.01 | MsG0780040846.01 | 0.803467 | 3.437345e-49 | 1.728638e-46 |
| MsG0680031263.01 | MsG0780040888.01 | 0.820418 | 6.930980e-53 | 5.481444e-50 |
| MsG0680031263.01 | MsG0780041416.01 | 0.802351 | 5.847566e-49 | 2.858159e-46 |
| MsG0680031263.01 | MsG0780041440.01 | 0.818361 | 2.039988e-52 | 1.523898e-49 |
| MsG0680031263.01 | MsG0880041834.01 | 0.801662 | 8.100971e-49 | 3.890544e-46 |
| MsG0680031263.01 | MsG0880041861.01 | 0.810774 | 9.750666e-51 | 5.930767e-48 |
| MsG0680031263.01 | MsG0880041863.01 | 0.816541 | 5.243108e-52 | 3.725577e-49 |
| MsG0680031263.01 | MsG0880041897.01 | 0.806259 | 8.970865e-50 | 4.847266e-47 |
| MsG0680031263.01 | MsG0880043037.01 | 0.800467 | 1.421770e-48 | 6.624823e-46 |
| MsG0680031263.01 | MsG0880043521.01 | 0.803527 | 3.340716e-49 | 1.682720e-46 |
| MsG0680031263.01 | MsG0880044131.01 | 0.800766 | 1.235467e-48 | 5.800559e-46 |
| MsG0680031263.01 | MsG0880045162.01 | 0.861111 | 1.290765e-63 | 3.611147e-60 |
| MsG0680031263.01 | MsG0880045164.01 | 0.821058 | 4.940387e-53 | 3.977469e-50 |
| MsG0680031263.01 | MsG0880045735.01 | 0.917861 | 3.168365e-86 | 9.358048e-82 |
| MsG0680031263.01 | MsG0880045765.01 | 0.805456 | 1.323538e-49 | 7.005552e-47 |
| MsG0680031263.01 | MsG0880046004.01 | 0.819003 | 1.459064e-52 | 1.109452e-49 |
| MsG0680031263.01 | MsG0880046421.01 | 0.849077 | 4.074116e-60 | 7.634391e-57 |
| MsG0680031263.01 | MsG0880046516.01 | 0.806930 | 6.474216e-50 | 3.558797e-47 |
| MsG0680031263.01 | MsG0880046724.01 | 0.846996 | 1.528982e-59 | 2.679222e-56 |
| MsG0680031263.01 | MsG0880047063.01 | 0.850873 | 1.281101e-60 | 2.545470e-57 |
| MsG0680031263.01 | MsG0880047135.01 | 0.849280 | 3.577516e-60 | 6.747905e-57 |
| MsG0680031263.01 | MsG0880047394.01 | 0.801638 | 8.192210e-49 | 3.932028e-46 |
| MsG0680031263.01 | MsG0880047473.01 | 0.801478 | 8.835696e-49 | 4.223903e-46 |
| MsG0680031263.01 | MsG0880047754.01 | 0.806714 | 7.192772e-50 | 3.931701e-47 |
| MsG0680031263.01 | MsG0880047764.01 | 0.812434 | 4.248268e-51 | 2.701015e-48 |
| MsG0480018653.01 | MsG0680031263.01 | 0.806084 | 9.765759e-50 | 5.253055e-47 |
| MsG0480019148.01 | MsG0680031263.01 | 0.801762 | 7.727060e-49 | 3.720366e-46 |
| MsG0480019711.01 | MsG0680031263.01 | 0.809264 | 2.061496e-50 | 1.204796e-47 |
| MsG0480020765.01 | MsG0680031263.01 | 0.806042 | 9.968090e-50 | 5.356067e-47 |
| MsG0480020890.01 | MsG0680031263.01 | 0.800101 | 1.687454e-48 | 7.790328e-46 |
| MsG0480021056.01 | MsG0680031263.01 | 0.865730 | 4.778323e-65 | 1.570954e-61 |
| MsG0480022054.01 | MsG0680031263.01 | 0.847921 | 8.515815e-60 | 1.537095e-56 |
| MsG0480022711.01 | MsG0680031263.01 | 0.804093 | 2.548637e-49 | 1.302527e-46 |
| MsG0480023055.01 | MsG0680031263.01 | 0.802960 | 4.377635e-49 | 2.173062e-46 |
| MsG0480023138.01 | MsG0680031263.01 | 0.879889 | 8.620523e-70 | 4.755253e-66 |
| MsG0480023150.01 | MsG0680031263.01 | 0.812788 | 3.553872e-51 | 2.280413e-48 |
| MsG0480023601.01 | MsG0680031263.01 | 0.813417 | 2.587430e-51 | 1.688753e-48 |
| MsG0580024197.01 | MsG0680031263.01 | 0.818151 | 2.276777e-52 | 1.690776e-49 |
| MsG0580024790.01 | MsG0680031263.01 | -0.818493 | 1.904258e-52 | 1.427616e-49 |
| MsG0580024952.01 | MsG0680031263.01 | 0.875257 | 3.552575e-68 | 1.648052e-64 |
| MsG0580025053.01 | MsG0680031263.01 | 0.878823 | 2.054987e-69 | 1.088348e-65 |
| MsG0580025587.01 | MsG0680031263.01 | 0.801961 | 7.031857e-49 | 3.402831e-46 |
| MsG0580025612.01 | MsG0680031263.01 | 0.803462 | 3.445897e-49 | 1.732743e-46 |
| MsG0580025661.01 | MsG0680031263.01 | 0.819786 | 9.670393e-53 | 7.514712e-50 |
| MsG0380014948.01 | MsG0680031263.01 | 0.821801 | 3.328339e-53 | 2.735712e-50 |
| MsG0380016694.01 | MsG0680031263.01 | 0.811853 | 5.688769e-51 | 3.560123e-48 |
| MsG0380016923.01 | MsG0680031263.01 | 0.812208 | 4.758802e-51 | 3.007142e-48 |
| MsG0380017589.01 | MsG0680031263.01 | 0.807520 | 4.856647e-50 | 2.710878e-47 |
| MsG0380017893.01 | MsG0680031263.01 | 0.838391 | 2.957487e-57 | 3.955501e-54 |
| MsG0580026086.01 | MsG0680031263.01 | 0.809974 | 1.451505e-50 | 8.643817e-48 |
| MsG0580027655.01 | MsG0680031263.01 | 0.831770 | 1.382648e-55 | 1.515506e-52 |
| MsG0580028407.01 | MsG0680031263.01 | 0.874150 | 8.458595e-68 | 3.766546e-64 |
| MsG0580029236.01 | MsG0680031263.01 | 0.850221 | 1.952994e-60 | 3.798776e-57 |
| MsG0580029596.01 | MsG0680031263.01 | 0.813358 | 2.665654e-51 | 1.737042e-48 |
| MsG0580029736.01 | MsG0680031263.01 | 0.837903 | 3.949230e-57 | 5.203908e-54 |
| MsG0680030413.01 | MsG0680031263.01 | 0.810126 | 1.345723e-50 | 8.045640e-48 |
| MsG0280006592.01 | MsG0680031263.01 | 0.882597 | 9.114942e-71 | 5.585179e-67 |
| MsG0280006601.01 | MsG0680031263.01 | 0.815264 | 1.010712e-51 | 6.934935e-49 |
| MsG0280007527.01 | MsG0680031263.01 | 0.815535 | 8.794249e-52 | 6.079541e-49 |
| MsG0280007955.01 | MsG0680031263.01 | 0.833588 | 4.893977e-56 | 5.661251e-53 |
| MsG0280008113.01 | MsG0680031263.01 | 0.804575 | 2.022394e-49 | 1.046448e-46 |
| MsG0280008390.01 | MsG0680031263.01 | 0.803027 | 4.239946e-49 | 2.108257e-46 |
| MsG0280008391.01 | MsG0680031263.01 | 0.803309 | 3.707261e-49 | 1.856745e-46 |
| MsG0280008392.01 | MsG0680031263.01 | 0.809718 | 1.647308e-50 | 9.744299e-48 |
| MsG0280008899.01 | MsG0680031263.01 | 0.858778 | 6.522727e-63 | 1.683944e-59 |
| MsG0280009421.01 | MsG0680031263.01 | 0.836850 | 7.349262e-57 | 9.376676e-54 |
| MsG0280010284.01 | MsG0680031263.01 | 0.818313 | 2.092604e-52 | 1.560987e-49 |
| MsG0280010290.01 | MsG0680031263.01 | 0.826716 | 2.329312e-54 | 2.201752e-51 |
| MsG0280010349.01 | MsG0680031263.01 | 0.807028 | 6.172282e-50 | 3.401464e-47 |
| MsG0280010366.01 | MsG0680031263.01 | 0.811117 | 8.218681e-51 | 5.044493e-48 |
| MsG0280010517.01 | MsG0680031263.01 | 0.821817 | 3.300499e-53 | 2.714072e-50 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680031263.01.T01 | MTR_8g077830 | 81.070 | 243 | 7 | 1 | 1 | 204 | 1 | 243 | 2.90e-132 | 380 |
| MsG0680031263.01.T01 | MTR_5g019950 | 61.842 | 228 | 45 | 3 | 19 | 204 | 18 | 245 | 4.07e-78 | 242 |
| MsG0680031263.01.T01 | MTR_3g109950 | 75.342 | 146 | 36 | 0 | 49 | 194 | 53 | 198 | 5.22e-66 | 209 |
| MsG0680031263.01.T01 | MTR_3g109950 | 75.342 | 146 | 36 | 0 | 49 | 194 | 53 | 198 | 5.32e-66 | 210 |
| MsG0680031263.01.T01 | MTR_3g109950 | 75.342 | 146 | 36 | 0 | 49 | 194 | 53 | 198 | 7.57e-66 | 210 |
| MsG0680031263.01.T01 | MTR_1g026910 | 56.000 | 175 | 75 | 1 | 20 | 194 | 6 | 178 | 3.30e-56 | 184 |
| MsG0680031263.01.T01 | MTR_1g026910 | 56.000 | 175 | 75 | 1 | 20 | 194 | 6 | 178 | 7.65e-56 | 184 |
| MsG0680031263.01.T01 | MTR_8g088080 | 73.643 | 129 | 34 | 0 | 62 | 190 | 65 | 193 | 1.48e-55 | 184 |
| MsG0680031263.01.T01 | MTR_8g088070 | 69.925 | 133 | 39 | 1 | 62 | 194 | 60 | 191 | 4.30e-53 | 177 |
| MsG0680031263.01.T01 | MTR_7g103300 | 65.152 | 132 | 46 | 0 | 63 | 194 | 51 | 182 | 2.66e-52 | 172 |
| MsG0680031263.01.T01 | MTR_7g103300 | 65.152 | 132 | 46 | 0 | 63 | 194 | 51 | 182 | 4.87e-52 | 172 |
| MsG0680031263.01.T01 | MTR_7g103300 | 65.152 | 132 | 46 | 0 | 63 | 194 | 51 | 182 | 1.26e-51 | 173 |
| MsG0680031263.01.T01 | MTR_7g103300 | 65.152 | 132 | 46 | 0 | 63 | 194 | 51 | 182 | 2.77e-51 | 172 |
| MsG0680031263.01.T01 | MTR_7g103300 | 66.142 | 127 | 43 | 0 | 68 | 194 | 8 | 134 | 2.70e-48 | 163 |
| MsG0680031263.01.T01 | MTR_1g061710 | 51.124 | 178 | 84 | 2 | 17 | 194 | 9 | 183 | 1.07e-47 | 164 |
| MsG0680031263.01.T01 | MTR_7g103300 | 67.391 | 92 | 30 | 0 | 103 | 194 | 1 | 92 | 1.60e-38 | 137 |
| MsG0680031263.01.T01 | MTR_2g010740 | 33.846 | 130 | 85 | 1 | 68 | 196 | 55 | 184 | 2.00e-12 | 65.9 |
| MsG0680031263.01.T01 | MTR_2g010740 | 33.846 | 130 | 85 | 1 | 68 | 196 | 55 | 184 | 2.06e-12 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680031263.01.T01 | AT2G25737 | 72.789 | 147 | 40 | 0 | 48 | 194 | 53 | 199 | 1.68e-65 | 207 |
| MsG0680031263.01.T01 | AT2G25737 | 72.789 | 147 | 40 | 0 | 48 | 194 | 53 | 199 | 1.69e-64 | 207 |
| MsG0680031263.01.T01 | AT2G36630 | 57.246 | 138 | 59 | 0 | 57 | 194 | 42 | 179 | 2.98e-49 | 167 |
| MsG0680031263.01.T01 | AT1G11540 | 42.727 | 110 | 62 | 1 | 76 | 184 | 56 | 165 | 1.22e-15 | 75.5 |
| MsG0680031263.01.T01 | AT1G61740 | 36.134 | 119 | 75 | 1 | 67 | 184 | 51 | 169 | 1.68e-15 | 75.1 |
| MsG0680031263.01.T01 | AT1G11540 | 43.902 | 82 | 45 | 1 | 104 | 184 | 1 | 82 | 4.09e-14 | 70.9 |
| MsG0680031263.01.T01 | AT4G21260 | 29.457 | 129 | 70 | 3 | 68 | 196 | 55 | 162 | 8.05e-11 | 61.2 |
Find 52 sgRNAs with CRISPR-Local
Find 177 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCAAAATGCTGGTTATTCT+AGG | 0.226848 | 6:-17001183 | None:intergenic |
| CCTATGCTTACTTTGATCAT+TGG | 0.307184 | 6:+17001709 | MsG0680031263.01.T01:CDS |
| GCTATTGCAGGCATGATTAC+AGG | 0.318014 | 6:+17001999 | MsG0680031263.01.T01:intron |
| GAGAAGCATCAACAATTATA+TGG | 0.361224 | 6:+17001318 | MsG0680031263.01.T01:CDS |
| TTCGTCTTCCAAAACTCTTT+CGG | 0.369986 | 6:-17001384 | None:intergenic |
| TAGTTTAGCCGAAAGAGTTT+TGG | 0.383679 | 6:+17001376 | MsG0680031263.01.T01:CDS |
| GTTGAGCAGGAAATGAAGTT+TGG | 0.401432 | 6:+17001598 | MsG0680031263.01.T01:intron |
| TGAACGGTTTGAAACAATAT+AGG | 0.402736 | 6:-17001258 | None:intergenic |
| AGAAGTTTCTTCTGGTATAG+TGG | 0.415578 | 6:+17001434 | MsG0680031263.01.T01:CDS |
| GAGAGGGCTGTAGAAGACTT+TGG | 0.417036 | 6:-17001739 | None:intergenic |
| TTAATGTCATATTTGCTGAT+TGG | 0.419755 | 6:+17002153 | MsG0680031263.01.T01:CDS |
| TTGGGAAGTGTAGGAGGAGT+AGG | 0.421290 | 6:+17001667 | MsG0680031263.01.T01:CDS |
| AGTCTTCCTATGAACGTGTT+TGG | 0.439230 | 6:+17001459 | MsG0680031263.01.T01:CDS |
| GTAGGAGGAGTAGGAGGTGG+AGG | 0.451115 | 6:+17001676 | MsG0680031263.01.T01:CDS |
| CTTTACTTGACAACATTCAC+TGG | 0.454961 | 6:+17003411 | MsG0680031263.01.T01:CDS |
| AGCAGGAAATGAAGTTTGGT+TGG | 0.456534 | 6:+17001602 | MsG0680031263.01.T01:intron |
| CGATGTTTATAATAAAACTT+GGG | 0.458146 | 6:+17001070 | MsG0680031263.01.T01:five_prime_UTR |
| TCGATGTTTATAATAAAACT+TGG | 0.459360 | 6:+17001069 | MsG0680031263.01.T01:five_prime_UTR |
| GGCATGATTACAGGAGCAGC+TGG | 0.459374 | 6:+17002008 | MsG0680031263.01.T01:intron |
| CCTTCATCTTGTAGATCAGC+TGG | 0.459404 | 6:-17003290 | None:intergenic |
| CACAGGCCAAACACGTTCAT+AGG | 0.464015 | 6:-17001465 | None:intergenic |
| CAGTGAATGTTGTCAAGTAA+AGG | 0.464845 | 6:-17003410 | None:intergenic |
| ATTGTCGTAGGTTCTATTGT+TGG | 0.473965 | 6:+17001628 | MsG0680031263.01.T01:CDS |
| TTCCTAGCATTAGCATAGGC+TGG | 0.478501 | 6:-17002112 | None:intergenic |
| AGTGAATGTTGTCAAGTAAA+GGG | 0.481684 | 6:-17003409 | None:intergenic |
| TGTTTCAAACCGTTCATACA+TGG | 0.488172 | 6:+17001265 | MsG0680031263.01.T01:exon |
| AGTGTAGGAGGAGTAGGAGG+TGG | 0.490550 | 6:+17001673 | MsG0680031263.01.T01:CDS |
| CCAGCTGATCTACAAGATGA+AGG | 0.495309 | 6:+17003290 | MsG0680031263.01.T01:CDS |
| GGAAGTGTAGGAGGAGTAGG+AGG | 0.499007 | 6:+17001670 | MsG0680031263.01.T01:CDS |
| TTGCTTATCATTCTGTTCAT+CGG | 0.504723 | 6:+17002188 | MsG0680031263.01.T01:CDS |
| GCAAGATCATAATCTATAAG+TGG | 0.507543 | 6:-17002080 | None:intergenic |
| GGAGCAGCATTGGGAAGTGT+AGG | 0.522662 | 6:+17001658 | MsG0680031263.01.T01:CDS |
| ATAAGTGGCATGTCTAGTGT+AGG | 0.528419 | 6:-17002065 | None:intergenic |
| CCAATGATCAAAGTAAGCAT+AGG | 0.543311 | 6:-17001709 | None:intergenic |
| GCAGCATTGGGAAGTGTAGG+AGG | 0.544657 | 6:+17001661 | MsG0680031263.01.T01:CDS |
| CTTCAAAAGCCATGTATGAA+CGG | 0.550042 | 6:-17001274 | None:intergenic |
| CAATTATATGGCTAGTCTCG+TGG | 0.555789 | 6:+17001330 | MsG0680031263.01.T01:CDS |
| CAATGATCAAAGTAAGCATA+GGG | 0.558927 | 6:-17001708 | None:intergenic |
| TGTCATATTTGCTGATTGGA+TGG | 0.563702 | 6:+17002157 | MsG0680031263.01.T01:CDS |
| CTAATTCCTAGCATTAGCAT+AGG | 0.571256 | 6:-17002116 | None:intergenic |
| ACTTGACAACATTCACTGGA+AGG | 0.572833 | 6:+17003415 | MsG0680031263.01.T01:CDS |
| TAAGTGGCATGTCTAGTGTA+GGG | 0.577620 | 6:-17002064 | None:intergenic |
| GATGTTTATAATAAAACTTG+GGG | 0.579977 | 6:+17001071 | MsG0680031263.01.T01:five_prime_UTR |
| CAACAGTGTATTACAATCTG+AGG | 0.597031 | 6:+17002033 | MsG0680031263.01.T01:CDS |
| CAGCTGATCTACAAGATGAA+GGG | 0.605381 | 6:+17003291 | MsG0680031263.01.T01:CDS |
| TTTGGTTGGAGAATTGTCGT+AGG | 0.615183 | 6:+17001616 | MsG0680031263.01.T01:CDS |
| AATATACTAACACTTAGAGA+GGG | 0.620159 | 6:-17001755 | None:intergenic |
| AAATATACTAACACTTAGAG+AGG | 0.625688 | 6:-17001756 | None:intergenic |
| TTCCAGCCTATGCTAATGCT+AGG | 0.630800 | 6:+17002110 | MsG0680031263.01.T01:CDS |
| CTAATGCTAGGAATTAGCAT+TGG | 0.634658 | 6:+17002122 | MsG0680031263.01.T01:CDS |
| GCATGATTACAGGAGCAGCT+GGG | 0.658797 | 6:+17002009 | MsG0680031263.01.T01:CDS |
| ATGTTTATAATAAAACTTGG+GGG | 0.685267 | 6:+17001072 | MsG0680031263.01.T01:five_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGGTAAATATTATATATATT+TGG | + | Chr6:17003638-17003657 | MsG0680031263.01.T01:intron | 10.0% |
| !! | ATTAATCCTTAAAAAAATTT+AGG | + | Chr6:17004179-17004198 | MsG0680031263.01.T01:intron | 10.0% |
| !!! | ATAGATTCATATATATATTT+TGG | + | Chr6:17002298-17002317 | MsG0680031263.01.T01:intron | 10.0% |
| !!! | TTTTTGTTTTTTTTGTTTTT+TGG | - | Chr6:17001223-17001242 | None:intergenic | 10.0% |
| !! | AATTCTTAAGTAGTTATATT+TGG | + | Chr6:17003484-17003503 | MsG0680031263.01.T01:intron | 15.0% |
| !!! | AATAGTTCTTATTTAACATT+TGG | + | Chr6:17003175-17003194 | MsG0680031263.01.T01:intron | 15.0% |
| !!! | CAAAAACCTAAATTTTTTTA+AGG | - | Chr6:17004188-17004207 | None:intergenic | 15.0% |
| !!! | TAATTTATAACTTGCTTTTT+TGG | + | Chr6:17004046-17004065 | MsG0680031263.01.T01:intron | 15.0% |
| !! | AACTAAATACATATCTTGAT+TGG | + | Chr6:17004208-17004227 | MsG0680031263.01.T01:intron | 20.0% |
| !! | ATATATAATATTTACCTGCA+AGG | - | Chr6:17003635-17003654 | None:intergenic | 20.0% |
| !! | ATGTTTATAATAAAACTTGG+GGG | + | Chr6:17001072-17001091 | MsG0680031263.01.T01:five_prime_UTR | 20.0% |
| !! | CGATGTTTATAATAAAACTT+GGG | + | Chr6:17001070-17001089 | MsG0680031263.01.T01:five_prime_UTR | 20.0% |
| !! | GATGTTTATAATAAAACTTG+GGG | + | Chr6:17001071-17001090 | MsG0680031263.01.T01:five_prime_UTR | 20.0% |
| !! | GTTCTTGAAAAAATTGAATT+TGG | - | Chr6:17002822-17002841 | None:intergenic | 20.0% |
| !! | TCATGTCAATATTATAAATG+AGG | - | Chr6:17001541-17001560 | None:intergenic | 20.0% |
| !! | TCGATGTTTATAATAAAACT+TGG | + | Chr6:17001069-17001088 | MsG0680031263.01.T01:five_prime_UTR | 20.0% |
| !! | TGATATAGTAGTATACATAA+AGG | + | Chr6:17003757-17003776 | MsG0680031263.01.T01:intron | 20.0% |
| !! | TTAATAAGAGAAATGTTAAC+CGG | + | Chr6:17003913-17003932 | MsG0680031263.01.T01:intron | 20.0% |
| !! | TTAATTAACACAAATAAGAG+AGG | + | Chr6:17003152-17003171 | MsG0680031263.01.T01:intron | 20.0% |
| !! | TTATATATATAGTCGATGTT+TGG | + | Chr6:17001803-17001822 | MsG0680031263.01.T01:intron | 20.0% |
| !!! | AATTAATTGTGATTTGTTGA+CGG | - | Chr6:17003855-17003874 | None:intergenic | 20.0% |
| !!! | CCTTTTTTAGTATTCTTAAT+CGG | - | Chr6:17003951-17003970 | None:intergenic | 20.0% |
| !!! | GATACTTTATGTTATGTTTT+TGG | + | Chr6:17001505-17001524 | MsG0680031263.01.T01:intron | 20.0% |
| !!! | TACTACTATATCACAATTTT+TGG | - | Chr6:17003750-17003769 | None:intergenic | 20.0% |
| !!! | TATGTATTGGTATGTTTATT+TGG | - | Chr6:17001956-17001975 | None:intergenic | 20.0% |
| !!! | TATTGTATTTTTTCCGAATT+GGG | + | Chr6:17002399-17002418 | MsG0680031263.01.T01:intron | 20.0% |
| !!! | TTATTGTATTTTTTCCGAAT+TGG | + | Chr6:17002398-17002417 | MsG0680031263.01.T01:intron | 20.0% |
| ! | AAAATGTTTGATAAACTCAC+AGG | - | Chr6:17001485-17001504 | None:intergenic | 25.0% |
| ! | AAATATACTAACACTTAGAG+AGG | - | Chr6:17001759-17001778 | None:intergenic | 25.0% |
| ! | AATAACCAAATGCAATATGT+TGG | - | Chr6:17002383-17002402 | None:intergenic | 25.0% |
| ! | AATAAGAAGTGAGAAAAACA+AGG | + | Chr6:17002643-17002662 | MsG0680031263.01.T01:intron | 25.0% |
| ! | AATATACTAACACTTAGAGA+GGG | - | Chr6:17001758-17001777 | None:intergenic | 25.0% |
| ! | AGTTGTATAACTTCATAGAT+TGG | + | Chr6:17003699-17003718 | MsG0680031263.01.T01:intron | 25.0% |
| ! | ATCAGTTCTTATGTATGTTT+GGG | + | Chr6:17003442-17003461 | MsG0680031263.01.T01:intron | 25.0% |
| ! | CAGAAAGAATACATATGTAT+TGG | - | Chr6:17001969-17001988 | None:intergenic | 25.0% |
| ! | CCGATTAAGAATACTAAAAA+AGG | + | Chr6:17003948-17003967 | MsG0680031263.01.T01:intron | 25.0% |
| ! | GAAAAGGAACAATTATGAAA+AGG | + | Chr6:17002913-17002932 | MsG0680031263.01.T01:intron | 25.0% |
| ! | TAATACAAATGTTCCTATGT+AGG | - | Chr6:17003788-17003807 | None:intergenic | 25.0% |
| ! | TACTCTTACTATAAAGTAGA+AGG | - | Chr6:17002985-17003004 | None:intergenic | 25.0% |
| ! | TATCAGTTCTTATGTATGTT+TGG | + | Chr6:17003441-17003460 | MsG0680031263.01.T01:intron | 25.0% |
| ! | TGAAAAAAAGAAGTTTCTTC+TGG | + | Chr6:17001426-17001445 | MsG0680031263.01.T01:CDS | 25.0% |
| ! | TTCTTATTGGTCAAAAACAA+TGG | - | Chr6:17002631-17002650 | None:intergenic | 25.0% |
| ! | TTGACATGATGTTATGAAAT+TGG | + | Chr6:17001552-17001571 | MsG0680031263.01.T01:intron | 25.0% |
| !! | TTAATGTCATATTTGCTGAT+TGG | + | Chr6:17002153-17002172 | MsG0680031263.01.T01:CDS | 25.0% |
| !! | TTTTCCAGATCATTCTTTAT+AGG | + | Chr6:17003329-17003348 | MsG0680031263.01.T01:intron | 25.0% |
| !! | TTTTTCATGACAACAATTTC+TGG | - | Chr6:17001413-17001432 | None:intergenic | 25.0% |
| !!! | ACAATTTTTGGTCTTTTAAC+AGG | - | Chr6:17003738-17003757 | None:intergenic | 25.0% |
| !!! | GGTGTAAATTTTTTTACATC+AGG | - | Chr6:17003834-17003853 | None:intergenic | 25.0% |
| !!! | TTGTTTTTCTCACTTCTTAT+TGG | - | Chr6:17002644-17002663 | None:intergenic | 25.0% |
| AAAACAATGGAGAGAGAAAA+AGG | - | Chr6:17002618-17002637 | None:intergenic | 30.0% | |
| AAATCTAGACAGTTTGATGT+CGG | + | Chr6:17002738-17002757 | MsG0680031263.01.T01:intron | 30.0% | |
| AGTCATCTACATGTAATAAC+TGG | - | Chr6:17003098-17003117 | None:intergenic | 30.0% | |
| AGTGAATGTTGTCAAGTAAA+GGG | - | Chr6:17003412-17003431 | None:intergenic | 30.0% | |
| ATGAAGGGTAATTATTTCCA+AGG | + | Chr6:17003306-17003325 | MsG0680031263.01.T01:intron | 30.0% | |
| ATTAAGAAGCCAATACTCTA+TGG | - | Chr6:17003611-17003630 | None:intergenic | 30.0% | |
| CAATGATCAAAGTAAGCATA+GGG | - | Chr6:17001711-17001730 | None:intergenic | 30.0% | |
| CATAAAGGTTTATCCTACAT+AGG | + | Chr6:17003772-17003791 | MsG0680031263.01.T01:intron | 30.0% | |
| GCAAGATCATAATCTATAAG+TGG | - | Chr6:17002083-17002102 | None:intergenic | 30.0% | |
| TATAATAAAACTTGGGGGTT+TGG | + | Chr6:17001077-17001096 | MsG0680031263.01.T01:five_prime_UTR | 30.0% | |
| TATGTTAAATTCTTGTGTGC+AGG | + | Chr6:17003385-17003404 | MsG0680031263.01.T01:intron | 30.0% | |
| TCAACAAAGTTGTCATCAAA+TGG | + | Chr6:17002669-17002688 | MsG0680031263.01.T01:intron | 30.0% | |
| TGTAATAACTGGAAGTTTGT+AGG | - | Chr6:17003087-17003106 | None:intergenic | 30.0% | |
| TGTTTAGCATAATTGCTCTT+GGG | + | Chr6:17002225-17002244 | MsG0680031263.01.T01:intron | 30.0% | |
| TTGCTTATCATTCTGTTCAT+CGG | + | Chr6:17002188-17002207 | MsG0680031263.01.T01:CDS | 30.0% | |
| ! | AAACTTGTTCCATAGAGTAT+TGG | + | Chr6:17003599-17003618 | MsG0680031263.01.T01:intron | 30.0% |
| ! | TGAACGGTTTGAAACAATAT+AGG | - | Chr6:17001261-17001280 | None:intergenic | 30.0% |
| ! | TGATTTCTTATTGCTATTGC+AGG | + | Chr6:17001987-17002006 | MsG0680031263.01.T01:intron | 30.0% |
| ! | TGCAAGTCTAACTGAAATTT+TGG | + | Chr6:17004253-17004272 | MsG0680031263.01.T01:intron | 30.0% |
| ! | TTCAAAATGCTGGTTATTCT+AGG | - | Chr6:17001186-17001205 | None:intergenic | 30.0% |
| !! | GAGAAGCATCAACAATTATA+TGG | + | Chr6:17001318-17001337 | MsG0680031263.01.T01:CDS | 30.0% |
| !! | TAAAAAAGTGTCATGCTAAC+CGG | - | Chr6:17004097-17004116 | None:intergenic | 30.0% |
| !! | TTCAGAAGCATCTGATATAA+GGG | - | Chr6:17003252-17003271 | None:intergenic | 30.0% |
| !!! | AACCACTTTTTGACAACTTT+TGG | + | Chr6:17002546-17002565 | MsG0680031263.01.T01:intron | 30.0% |
| !!! | CTACTACTTTTTCAAAATGC+TGG | - | Chr6:17001196-17001215 | None:intergenic | 30.0% |
| !!! | CTCTTCTGTTTGTGTTTTTT+GGG | + | Chr6:17002254-17002273 | MsG0680031263.01.T01:intron | 30.0% |
| !!! | GGTTCTATTGTTGGATTTTT+TGG | + | Chr6:17001637-17001656 | MsG0680031263.01.T01:CDS | 30.0% |
| AAGAATGATCTGGAAAACCT+TGG | - | Chr6:17003326-17003345 | None:intergenic | 35.0% | |
| AAGCTACAAATAGTAGCATG+TGG | + | Chr6:17001885-17001904 | MsG0680031263.01.T01:intron | 35.0% | |
| AGAACCTGATTCCAACATTT+GGG | - | Chr6:17003047-17003066 | None:intergenic | 35.0% | |
| AGAAGTTTCTTCTGGTATAG+TGG | + | Chr6:17001434-17001453 | MsG0680031263.01.T01:CDS | 35.0% | |
| AGTTCTTATGTATGTTTGGG+TGG | + | Chr6:17003445-17003464 | MsG0680031263.01.T01:intron | 35.0% | |
| ATTGTCGTAGGTTCTATTGT+TGG | + | Chr6:17001628-17001647 | MsG0680031263.01.T01:CDS | 35.0% | |
| CAACAGTGTATTACAATCTG+AGG | + | Chr6:17002033-17002052 | MsG0680031263.01.T01:CDS | 35.0% | |
| CAGTGAATGTTGTCAAGTAA+AGG | - | Chr6:17003413-17003432 | None:intergenic | 35.0% | |
| CCAATGATCAAAGTAAGCAT+AGG | - | Chr6:17001712-17001731 | None:intergenic | 35.0% | |
| CCTATGCTTACTTTGATCAT+TGG | + | Chr6:17001709-17001728 | MsG0680031263.01.T01:CDS | 35.0% | |
| CTAATGCTAGGAATTAGCAT+TGG | + | Chr6:17002122-17002141 | MsG0680031263.01.T01:CDS | 35.0% | |
| CTAATTCCTAGCATTAGCAT+AGG | - | Chr6:17002119-17002138 | None:intergenic | 35.0% | |
| CTCTCCTATAAAGAATGATC+TGG | - | Chr6:17003336-17003355 | None:intergenic | 35.0% | |
| CTGTTTAGCATAATTGCTCT+TGG | + | Chr6:17002224-17002243 | MsG0680031263.01.T01:intron | 35.0% | |
| CTTCAAAAGCCATGTATGAA+CGG | - | Chr6:17001277-17001296 | None:intergenic | 35.0% | |
| CTTTACTTGACAACATTCAC+TGG | + | Chr6:17003411-17003430 | MsG0680031263.01.T01:CDS | 35.0% | |
| CTTTATAGGAGAGTTCATTG+AGG | + | Chr6:17003343-17003362 | MsG0680031263.01.T01:intron | 35.0% | |
| GTAACAGAAATGCTTGCAAT+AGG | - | Chr6:17004301-17004320 | None:intergenic | 35.0% | |
| GTCCAAAAGTTGTCAAAAAG+TGG | - | Chr6:17002551-17002570 | None:intergenic | 35.0% | |
| TACAAATAGTAGCATGTGGT+TGG | + | Chr6:17001889-17001908 | MsG0680031263.01.T01:intron | 35.0% | |
| TACTATGCTACTGAACTTTC+AGG | + | Chr6:17003003-17003022 | MsG0680031263.01.T01:intron | 35.0% | |
| TAGAACCTGATTCCAACATT+TGG | - | Chr6:17003048-17003067 | None:intergenic | 35.0% | |
| TGTTTCAAACCGTTCATACA+TGG | + | Chr6:17001265-17001284 | MsG0680031263.01.T01:exon | 35.0% | |
| TTCGTCTTCCAAAACTCTTT+CGG | - | Chr6:17001387-17001406 | None:intergenic | 35.0% | |
| TTTGTAGCTTCACCAATTTC+AGG | - | Chr6:17001875-17001894 | None:intergenic | 35.0% | |
| ! | AGTATTCTTAATCGGTGTTC+CGG | - | Chr6:17003943-17003962 | None:intergenic | 35.0% |
| ! | TAGTTTAGCCGAAAGAGTTT+TGG | + | Chr6:17001376-17001395 | MsG0680031263.01.T01:CDS | 35.0% |
| ! | TATCTAGTTGATGCAACACA+TGG | + | Chr6:17002845-17002864 | MsG0680031263.01.T01:intron | 35.0% |
| ! | TCCACTAAAGCTTTAGTCAA+AGG | + | Chr6:17002879-17002898 | MsG0680031263.01.T01:intron | 35.0% |
| ! | TGTCATATTTGCTGATTGGA+TGG | + | Chr6:17002157-17002176 | MsG0680031263.01.T01:CDS | 35.0% |
| ! | TGTTGATTGTGTAAATGCGT+TGG | - | Chr6:17002439-17002458 | None:intergenic | 35.0% |
| !! | AAAGGCATCGATACATGAAA+AGG | + | Chr6:17002897-17002916 | MsG0680031263.01.T01:intron | 35.0% |
| !! | CTTCAGAAGCATCTGATATA+AGG | - | Chr6:17003253-17003272 | None:intergenic | 35.0% |
| !! | TCAGAAGCATCTGATATAAG+GGG | - | Chr6:17003251-17003270 | None:intergenic | 35.0% |
| !! | TTGGTGATGATGCATTGTAA+TGG | + | Chr6:17001571-17001590 | MsG0680031263.01.T01:intron | 35.0% |
| !!! | GCTCTTCTGTTTGTGTTTTT+TGG | + | Chr6:17002253-17002272 | MsG0680031263.01.T01:intron | 35.0% |
| !!! | GGCTTTTGAAGTTCAAAAGA+AGG | + | Chr6:17001286-17001305 | MsG0680031263.01.T01:CDS | 35.0% |
| !!! | TACAGTTTTGGACCTGAAAT+TGG | + | Chr6:17001860-17001879 | MsG0680031263.01.T01:intron | 35.0% |
| !!! | TTGTAATGGTTTTGTTGAGC+AGG | + | Chr6:17001585-17001604 | MsG0680031263.01.T01:intron | 35.0% |
| !!! | TTTTTTGGGAAAGAAGCACA+TGG | + | Chr6:17002268-17002287 | MsG0680031263.01.T01:intron | 35.0% |
| ACCGACAAATTGAGATCAGA+CGG | + | Chr6:17002467-17002486 | MsG0680031263.01.T01:intron | 40.0% | |
| ACCGTCTGATCTCAATTTGT+CGG | - | Chr6:17002471-17002490 | None:intergenic | 40.0% | |
| ACTTGACAACATTCACTGGA+AGG | + | Chr6:17003415-17003434 | MsG0680031263.01.T01:CDS | 40.0% | |
| AGAGAGAAAAAGGAAGAGAG+AGG | - | Chr6:17002608-17002627 | None:intergenic | 40.0% | |
| AGCAGGAAATGAAGTTTGGT+TGG | + | Chr6:17001602-17001621 | MsG0680031263.01.T01:intron | 40.0% | |
| AGTCTTCCTATGAACGTGTT+TGG | + | Chr6:17001459-17001478 | MsG0680031263.01.T01:CDS | 40.0% | |
| ATAAGTGGCATGTCTAGTGT+AGG | - | Chr6:17002068-17002087 | None:intergenic | 40.0% | |
| CAGCTGATCTACAAGATGAA+GGG | + | Chr6:17003291-17003310 | MsG0680031263.01.T01:CDS | 40.0% | |
| GAAGCCATATGCTTATGCAA+AGG | + | Chr6:17004328-17004347 | MsG0680031263.01.T01:intron | 40.0% | |
| GTTGAGCAGGAAATGAAGTT+TGG | + | Chr6:17001598-17001617 | MsG0680031263.01.T01:intron | 40.0% | |
| GTTTGTAGGCACTTACAATC+AGG | - | Chr6:17003073-17003092 | None:intergenic | 40.0% | |
| TAAGTGGCATGTCTAGTGTA+GGG | - | Chr6:17002067-17002086 | None:intergenic | 40.0% | |
| TGCAGCCAACATATTGCATT+TGG | + | Chr6:17002375-17002394 | MsG0680031263.01.T01:intron | 40.0% | |
| TTCATATAGTTTCCGAACCG+CGG | - | Chr6:17001915-17001934 | None:intergenic | 40.0% | |
| TTGATGCAACACATGGTGAT+AGG | + | Chr6:17002852-17002871 | MsG0680031263.01.T01:intron | 40.0% | |
| TTGGCTTCTTAATTCCTTGC+AGG | + | Chr6:17003618-17003637 | MsG0680031263.01.T01:intron | 40.0% | |
| TTTGGTTGGAGAATTGTCGT+AGG | + | Chr6:17001616-17001635 | MsG0680031263.01.T01:CDS | 40.0% | |
| ! | GCCTTTGACTAAAGCTTTAG+TGG | - | Chr6:17002883-17002902 | None:intergenic | 40.0% |
| ! | GTATTCTTAATCGGTGTTCC+GGG | - | Chr6:17003942-17003961 | None:intergenic | 40.0% |
| ! | TATTCTTAATCGGTGTTCCG+GGG | - | Chr6:17003941-17003960 | None:intergenic | 40.0% |
| ! | TCGCGTCTCAAATACAGTTT+TGG | + | Chr6:17001848-17001867 | MsG0680031263.01.T01:intron | 40.0% |
| !! | ATATGAACTAGCTCTGAACG+CGG | + | Chr6:17001928-17001947 | MsG0680031263.01.T01:intron | 40.0% |
| !! | CAATTATATGGCTAGTCTCG+TGG | + | Chr6:17001330-17001349 | MsG0680031263.01.T01:CDS | 40.0% |
| !!! | GGATTTTTTGGAGCAGCATT+GGG | + | Chr6:17001649-17001668 | MsG0680031263.01.T01:CDS | 40.0% |
| !!! | TGGATTTTTTGGAGCAGCAT+TGG | + | Chr6:17001648-17001667 | MsG0680031263.01.T01:CDS | 40.0% |
| AAACTTGGGGGTTTGGAAAC+AGG | + | Chr6:17001084-17001103 | MsG0680031263.01.T01:five_prime_UTR | 45.0% | |
| ATCAGCATATAGGTGGTCGT+TGG | - | Chr6:17002765-17002784 | None:intergenic | 45.0% | |
| CCAGCTGATCTACAAGATGA+AGG | + | Chr6:17003290-17003309 | MsG0680031263.01.T01:CDS | 45.0% | |
| CCTTCATCTTGTAGATCAGC+TGG | - | Chr6:17003293-17003312 | None:intergenic | 45.0% | |
| CTGCTTAGGCAATCCCAATT+CGG | - | Chr6:17002415-17002434 | None:intergenic | 45.0% | |
| GAACTTTCAGGAAGCCTTTG+AGG | + | Chr6:17003015-17003034 | MsG0680031263.01.T01:intron | 45.0% | |
| GCATCACGCAATCAGCATAT+AGG | - | Chr6:17002775-17002794 | None:intergenic | 45.0% | |
| GCTATTGCAGGCATGATTAC+AGG | + | Chr6:17001999-17002018 | MsG0680031263.01.T01:intron | 45.0% | |
| GTAAATGCGTTGGACTGCTT+AGG | - | Chr6:17002429-17002448 | None:intergenic | 45.0% | |
| TCACGCAATCAGCATATAGG+TGG | - | Chr6:17002772-17002791 | None:intergenic | 45.0% | |
| TTCCAGCCTATGCTAATGCT+AGG | + | Chr6:17002110-17002129 | MsG0680031263.01.T01:CDS | 45.0% | |
| TTCCTAGCATTAGCATAGGC+TGG | - | Chr6:17002115-17002134 | None:intergenic | 45.0% | |
| AGAAATGTTAACCGGTGCCC+CGG | + | Chr6:17003921-17003940 | MsG0680031263.01.T01:intron | 50.0% | |
| CACAGGCCAAACACGTTCAT+AGG | - | Chr6:17001468-17001487 | None:intergenic | 50.0% | |
| CATTTGGGCTGCTTCCTCAA+AGG | - | Chr6:17003032-17003051 | None:intergenic | 50.0% | |
| GAGAGGGCTGTAGAAGACTT+TGG | - | Chr6:17001742-17001761 | None:intergenic | 50.0% | |
| GCAGCCCAAATGTTGGAATC+AGG | + | Chr6:17003040-17003059 | MsG0680031263.01.T01:intron | 50.0% | |
| GCATGATTACAGGAGCAGCT+GGG | + | Chr6:17002009-17002028 | MsG0680031263.01.T01:CDS | 50.0% | |
| GTATCCTTAACCAGTGCCCA+GGG | + | Chr6:17004068-17004087 | MsG0680031263.01.T01:intron | 50.0% | |
| TGAGGAAGCAGCCCAAATGT+TGG | + | Chr6:17003033-17003052 | MsG0680031263.01.T01:intron | 50.0% | |
| ! | TTGGGAAGTGTAGGAGGAGT+AGG | + | Chr6:17001667-17001686 | MsG0680031263.01.T01:CDS | 50.0% |
| AGTGTAGGAGGAGTAGGAGG+TGG | + | Chr6:17001673-17001692 | MsG0680031263.01.T01:CDS | 55.0% | |
| GGCATGATTACAGGAGCAGC+TGG | + | Chr6:17002008-17002027 | MsG0680031263.01.T01:intron | 55.0% | |
| GGTATCCTTAACCAGTGCCC+AGG | + | Chr6:17004067-17004086 | MsG0680031263.01.T01:intron | 55.0% | |
| TCATGCTAACCGGTGTCCCT+GGG | - | Chr6:17004087-17004106 | None:intergenic | 55.0% | |
| ! | GCAGCATTGGGAAGTGTAGG+AGG | + | Chr6:17001661-17001680 | MsG0680031263.01.T01:CDS | 55.0% |
| ! | GGAAGTGTAGGAGGAGTAGG+AGG | + | Chr6:17001670-17001689 | MsG0680031263.01.T01:CDS | 55.0% |
| ! | GGAGCAGCATTGGGAAGTGT+AGG | + | Chr6:17001658-17001677 | MsG0680031263.01.T01:CDS | 55.0% |
| ! | TAGTAGCATGTGGTTGGCCG+CGG | + | Chr6:17001895-17001914 | MsG0680031263.01.T01:intron | 55.0% |
| GTAGGAGGAGTAGGAGGTGG+AGG | + | Chr6:17001676-17001695 | MsG0680031263.01.T01:CDS | 60.0% | |
| GTCATGCTAACCGGTGTCCC+TGG | - | Chr6:17004088-17004107 | None:intergenic | 60.0% | |
| TAACCAGTGCCCAGGGACAC+CGG | + | Chr6:17004075-17004094 | MsG0680031263.01.T01:intron | 60.0% | |
| ! | TAATCGGTGTTCCGGGGCAC+CGG | - | Chr6:17003935-17003954 | None:intergenic | 60.0% |
| !! | GTGTCCCTGGGCACTGGTTA+AGG | - | Chr6:17004075-17004094 | None:intergenic | 60.0% |
| TAACCGGTGTCCCTGGGCAC+TGG | - | Chr6:17004081-17004100 | None:intergenic | 65.0% | |
| ! | GCATGTGGTTGGCCGCGGTT+CGG | + | Chr6:17001900-17001919 | MsG0680031263.01.T01:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr6 | gene | 17001051 | 17004351 | 17001051 | ID=MsG0680031263.01;Name=MsG0680031263.01 |
| Chr6 | mRNA | 17001051 | 17004351 | 17001051 | ID=MsG0680031263.01.T01;Parent=MsG0680031263.01;Name=MsG0680031263.01.T01;_AED=0.44;_eAED=0.49;_QI=233|0.54|0.58|1|1|1|12|0|220 |
| Chr6 | exon | 17001051 | 17001484 | 17001051 | ID=MsG0680031263.01.T01:exon:27742;Parent=MsG0680031263.01.T01 |
| Chr6 | exon | 17001607 | 17001766 | 17001607 | ID=MsG0680031263.01.T01:exon:27743;Parent=MsG0680031263.01.T01 |
| Chr6 | exon | 17002009 | 17002209 | 17002009 | ID=MsG0680031263.01.T01:exon:27744;Parent=MsG0680031263.01.T01 |
| Chr6 | exon | 17003261 | 17003312 | 17003261 | ID=MsG0680031263.01.T01:exon:27745;Parent=MsG0680031263.01.T01 |
| Chr6 | exon | 17003407 | 17003453 | 17003407 | ID=MsG0680031263.01.T01:exon:27746;Parent=MsG0680031263.01.T01 |
| Chr6 | exon | 17004350 | 17004351 | 17004350 | ID=MsG0680031263.01.T01:exon:27747;Parent=MsG0680031263.01.T01 |
| Chr6 | five_prime_UTR | 17001051 | 17001283 | 17001051 | ID=MsG0680031263.01.T01:five_prime_utr;Parent=MsG0680031263.01.T01 |
| Chr6 | CDS | 17001284 | 17001484 | 17001284 | ID=MsG0680031263.01.T01:cds;Parent=MsG0680031263.01.T01 |
| Chr6 | CDS | 17001607 | 17001766 | 17001607 | ID=MsG0680031263.01.T01:cds;Parent=MsG0680031263.01.T01 |
| Chr6 | CDS | 17002009 | 17002209 | 17002009 | ID=MsG0680031263.01.T01:cds;Parent=MsG0680031263.01.T01 |
| Chr6 | CDS | 17003261 | 17003312 | 17003261 | ID=MsG0680031263.01.T01:cds;Parent=MsG0680031263.01.T01 |
| Chr6 | CDS | 17003407 | 17003453 | 17003407 | ID=MsG0680031263.01.T01:cds;Parent=MsG0680031263.01.T01 |
| Chr6 | CDS | 17004350 | 17004351 | 17004350 | ID=MsG0680031263.01.T01:cds;Parent=MsG0680031263.01.T01 |
| Gene Sequence |
| Protein sequence |
