Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380012698.01.T01 | XP_003599197.1 | 89.598 | 423 | 35 | 2 | 1 | 414 | 1 | 423 | 0 | 742 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380012698.01.T01 | Q3EBZ2 | 42.657 | 429 | 182 | 18 | 14 | 414 | 1 | 393 | 1.60E-82 | 261 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380012698.01.T01 | G7IWN5 | 89.598 | 423 | 35 | 2 | 1 | 414 | 1 | 423 | 0.0 | 742 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180003731.01 | MsG0380012698.01 | 0.803245 | 3.821869e-49 | 1.911051e-46 |
| MsG0180006107.01 | MsG0380012698.01 | 0.833204 | 6.100063e-56 | 6.975922e-53 |
| MsG0380012698.01 | MsG0380017228.01 | 0.805692 | 1.180449e-49 | 6.286515e-47 |
| MsG0380012698.01 | MsG0480018333.01 | 0.827195 | 1.788972e-54 | 1.714954e-51 |
| MsG0380012698.01 | MsG0480019038.01 | 0.810681 | 1.021508e-50 | 6.197599e-48 |
| MsG0380012698.01 | MsG0480023897.01 | 0.814618 | 1.405613e-51 | 9.477526e-49 |
| MsG0380012698.01 | MsG0680035575.01 | 0.803259 | 3.796713e-49 | 1.899160e-46 |
| MsG0380012698.01 | MsG0680035777.01 | 0.815473 | 9.079395e-52 | 6.266324e-49 |
| MsG0380012698.01 | MsG0780037599.01 | 0.830044 | 3.665425e-55 | 3.817955e-52 |
| MsG0380012698.01 | MsG0780040481.01 | 0.819781 | 9.700592e-53 | 7.536945e-50 |
| MsG0380012698.01 | MsG0880041883.01 | 0.812084 | 5.065042e-51 | 3.189777e-48 |
| MsG0280007052.01 | MsG0380012698.01 | 0.816118 | 6.520456e-52 | 4.580137e-49 |
| MsG0280007071.01 | MsG0380012698.01 | 0.848955 | 4.407435e-60 | 8.225661e-57 |
| MsG0280008856.01 | MsG0380012698.01 | 0.801086 | 1.062659e-48 | 5.030325e-46 |
| MsG0280010173.01 | MsG0380012698.01 | 0.813937 | 1.987906e-51 | 1.315799e-48 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380012698.01.T01 | MTR_3g030050 | 89.598 | 423 | 35 | 2 | 1 | 414 | 1 | 423 | 0.0 | 742 |
| MsG0380012698.01.T01 | MTR_3g058460 | 58.432 | 421 | 125 | 14 | 1 | 414 | 1 | 378 | 1.31e-142 | 411 |
| MsG0380012698.01.T01 | MTR_3g037710 | 57.732 | 291 | 95 | 4 | 126 | 414 | 1 | 265 | 1.64e-99 | 298 |
| MsG0380012698.01.T01 | MTR_3g029620 | 43.584 | 413 | 179 | 11 | 14 | 412 | 1 | 373 | 5.48e-93 | 285 |
| MsG0380012698.01.T01 | MTR_3g029640 | 44.010 | 409 | 169 | 10 | 15 | 411 | 3 | 363 | 2.47e-91 | 280 |
| MsG0380012698.01.T01 | MTR_2g047180 | 44.010 | 409 | 171 | 12 | 15 | 411 | 3 | 365 | 1.32e-90 | 278 |
| MsG0380012698.01.T01 | MTR_3g030560 | 42.927 | 410 | 181 | 10 | 15 | 411 | 3 | 372 | 3.26e-90 | 278 |
| MsG0380012698.01.T01 | MTR_3g030080 | 41.162 | 413 | 188 | 12 | 11 | 411 | 2 | 371 | 1.19e-86 | 268 |
| MsG0380012698.01.T01 | MTR_1g049170 | 40.566 | 424 | 180 | 10 | 15 | 411 | 5 | 383 | 1.97e-86 | 268 |
| MsG0380012698.01.T01 | MTR_6g018360 | 39.759 | 415 | 198 | 12 | 13 | 411 | 2 | 380 | 3.46e-84 | 263 |
| MsG0380012698.01.T01 | MTR_3g029800 | 42.998 | 407 | 170 | 12 | 15 | 412 | 3 | 356 | 9.14e-84 | 260 |
| MsG0380012698.01.T01 | MTR_3g029650 | 42.195 | 410 | 171 | 12 | 15 | 411 | 4 | 360 | 1.63e-82 | 268 |
| MsG0380012698.01.T01 | MTR_3g029650 | 36.386 | 415 | 222 | 9 | 9 | 411 | 365 | 749 | 9.05e-66 | 223 |
| MsG0380012698.01.T01 | MTR_3g030380 | 39.702 | 403 | 187 | 9 | 15 | 411 | 4 | 356 | 4.86e-80 | 251 |
| MsG0380012698.01.T01 | MTR_3g092000 | 39.030 | 433 | 188 | 10 | 15 | 411 | 6 | 398 | 5.59e-79 | 250 |
| MsG0380012698.01.T01 | MTR_3g047980 | 43.069 | 404 | 148 | 11 | 16 | 411 | 30 | 359 | 5.85e-78 | 246 |
| MsG0380012698.01.T01 | MTR_6g018390 | 38.821 | 407 | 196 | 10 | 14 | 411 | 3 | 365 | 9.43e-78 | 245 |
| MsG0380012698.01.T01 | MTR_1g016570 | 39.430 | 421 | 178 | 13 | 2 | 412 | 7 | 360 | 1.01e-77 | 245 |
| MsG0380012698.01.T01 | MTR_3g030360 | 39.659 | 411 | 168 | 13 | 16 | 411 | 5 | 350 | 1.89e-76 | 241 |
| MsG0380012698.01.T01 | MTR_6g018315 | 38.500 | 400 | 196 | 12 | 27 | 411 | 1 | 365 | 5.05e-74 | 237 |
| MsG0380012698.01.T01 | MTR_3g091990 | 37.831 | 415 | 205 | 7 | 15 | 411 | 6 | 385 | 6.51e-74 | 237 |
| MsG0380012698.01.T01 | MTR_3g030440 | 39.012 | 405 | 184 | 13 | 15 | 411 | 5 | 354 | 1.07e-73 | 234 |
| MsG0380012698.01.T01 | MTR_3g030480 | 39.109 | 404 | 185 | 13 | 15 | 411 | 4 | 353 | 2.26e-73 | 234 |
| MsG0380012698.01.T01 | MTR_1g026850 | 40.150 | 401 | 194 | 12 | 15 | 411 | 5 | 363 | 2.81e-73 | 234 |
| MsG0380012698.01.T01 | MTR_3g030355 | 34.325 | 437 | 199 | 13 | 15 | 411 | 5 | 393 | 7.08e-69 | 223 |
| MsG0380012698.01.T01 | MTR_6g018400 | 37.198 | 414 | 194 | 13 | 15 | 411 | 4 | 368 | 2.52e-68 | 221 |
| MsG0380012698.01.T01 | MTR_6g027040 | 35.238 | 420 | 205 | 13 | 13 | 411 | 2 | 375 | 9.82e-68 | 220 |
| MsG0380012698.01.T01 | MTR_6g027100 | 36.105 | 421 | 200 | 14 | 13 | 411 | 2 | 375 | 1.27e-67 | 221 |
| MsG0380012698.01.T01 | MTR_3g029670 | 36.471 | 425 | 199 | 14 | 15 | 411 | 4 | 385 | 1.72e-67 | 219 |
| MsG0380012698.01.T01 | MTR_3g029920 | 37.150 | 428 | 193 | 16 | 9 | 411 | 2 | 378 | 2.15e-65 | 214 |
| MsG0380012698.01.T01 | MTR_1g007260 | 37.349 | 415 | 186 | 13 | 15 | 407 | 21 | 383 | 1.54e-64 | 212 |
| MsG0380012698.01.T01 | MTR_7g005990 | 37.019 | 416 | 181 | 14 | 15 | 411 | 3 | 356 | 3.65e-63 | 207 |
| MsG0380012698.01.T01 | MTR_3g029750 | 34.988 | 423 | 208 | 11 | 15 | 411 | 4 | 385 | 3.78e-62 | 206 |
| MsG0380012698.01.T01 | MTR_3g029950 | 34.450 | 418 | 198 | 13 | 15 | 411 | 4 | 366 | 2.81e-58 | 195 |
| MsG0380012698.01.T01 | MTR_3g029840 | 34.815 | 405 | 202 | 10 | 15 | 411 | 4 | 354 | 7.49e-58 | 193 |
| MsG0380012698.01.T01 | MTR_3g029870 | 33.578 | 408 | 182 | 13 | 15 | 411 | 4 | 333 | 1.46e-53 | 181 |
| MsG0380012698.01.T01 | MTR_4g022880 | 52.105 | 190 | 59 | 3 | 224 | 413 | 16 | 173 | 6.35e-51 | 170 |
| MsG0380012698.01.T01 | MTR_8g074610 | 33.092 | 414 | 220 | 14 | 14 | 411 | 23 | 395 | 5.93e-49 | 171 |
| MsG0380012698.01.T01 | MTR_3g029820 | 33.252 | 412 | 165 | 14 | 16 | 411 | 9 | 326 | 9.02e-47 | 164 |
| MsG0380012698.01.T01 | MTR_6g018370 | 33.714 | 350 | 127 | 8 | 15 | 352 | 3 | 259 | 4.61e-44 | 154 |
| MsG0380012698.01.T01 | MTR_2g041510 | 32.512 | 406 | 213 | 15 | 15 | 405 | 25 | 384 | 9.53e-43 | 154 |
| MsG0380012698.01.T01 | MTR_2g041510 | 32.512 | 406 | 213 | 15 | 15 | 405 | 5 | 364 | 9.95e-43 | 154 |
| MsG0380012698.01.T01 | MTR_1g016540 | 42.654 | 211 | 79 | 5 | 212 | 412 | 1 | 179 | 1.28e-42 | 148 |
| MsG0380012698.01.T01 | MTR_3g029900 | 32.544 | 338 | 162 | 8 | 85 | 412 | 177 | 458 | 6.59e-41 | 152 |
| MsG0380012698.01.T01 | MTR_8g074640 | 33.092 | 414 | 217 | 15 | 15 | 411 | 5 | 375 | 1.00e-39 | 146 |
| MsG0380012698.01.T01 | MTR_5g042230 | 41.905 | 210 | 87 | 6 | 197 | 402 | 12 | 190 | 6.14e-38 | 136 |
| MsG0380012698.01.T01 | MTR_1g007250 | 44.898 | 196 | 69 | 5 | 212 | 404 | 1 | 160 | 2.32e-36 | 131 |
| MsG0380012698.01.T01 | MTR_1g007220 | 39.806 | 206 | 65 | 6 | 199 | 404 | 21 | 167 | 6.55e-33 | 122 |
| MsG0380012698.01.T01 | MTR_5g078450 | 41.317 | 167 | 46 | 5 | 246 | 411 | 2 | 117 | 2.94e-24 | 97.4 |
| MsG0380012698.01.T01 | MTR_3g114990 | 26.118 | 425 | 247 | 16 | 15 | 412 | 22 | 406 | 3.06e-23 | 101 |
| MsG0380012698.01.T01 | MTR_3g029850 | 44.882 | 127 | 53 | 4 | 289 | 414 | 9 | 119 | 3.91e-21 | 88.6 |
| MsG0380012698.01.T01 | MTR_8g035995 | 41.270 | 126 | 43 | 1 | 221 | 346 | 1 | 95 | 5.14e-19 | 84.0 |
| MsG0380012698.01.T01 | MTR_1g007200 | 53.409 | 88 | 34 | 3 | 312 | 397 | 12 | 94 | 1.79e-18 | 81.3 |
| MsG0380012698.01.T01 | MTR_6g009100 | 37.589 | 141 | 58 | 3 | 14 | 150 | 2 | 116 | 2.42e-16 | 75.1 |
| MsG0380012698.01.T01 | MTR_5g079830 | 23.098 | 368 | 218 | 9 | 13 | 366 | 3 | 319 | 4.09e-16 | 80.1 |
| MsG0380012698.01.T01 | MTR_8g085760 | 23.409 | 440 | 220 | 19 | 13 | 408 | 10 | 376 | 3.23e-15 | 77.0 |
| MsG0380012698.01.T01 | MTR_3g114970 | 24.586 | 362 | 215 | 12 | 15 | 368 | 3 | 314 | 3.14e-14 | 73.9 |
| MsG0380012698.01.T01 | MTR_1g007230 | 42.353 | 85 | 36 | 2 | 10 | 94 | 2 | 73 | 4.74e-13 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380012698.01.T01 | AT2G17030 | 42.657 | 429 | 182 | 18 | 14 | 414 | 1 | 393 | 1.63e-83 | 261 |
| MsG0380012698.01.T01 | AT2G17036 | 35.407 | 418 | 216 | 16 | 14 | 411 | 1 | 384 | 4.14e-55 | 187 |
| MsG0380012698.01.T01 | AT2G17036 | 35.337 | 416 | 215 | 16 | 16 | 411 | 2 | 383 | 2.56e-54 | 186 |
| MsG0380012698.01.T01 | AT5G60060 | 30.334 | 389 | 194 | 19 | 7 | 369 | 1 | 338 | 1.52e-29 | 118 |
| MsG0380012698.01.T01 | AT2G17690 | 28.406 | 433 | 234 | 16 | 14 | 396 | 1 | 407 | 6.33e-28 | 114 |
| MsG0380012698.01.T01 | AT5G24040 | 26.471 | 408 | 251 | 12 | 14 | 411 | 1 | 369 | 3.04e-26 | 109 |
| MsG0380012698.01.T01 | AT1G65770 | 28.042 | 378 | 220 | 13 | 14 | 381 | 1 | 336 | 1.17e-25 | 107 |
| MsG0380012698.01.T01 | AT2G26160 | 25.199 | 377 | 201 | 12 | 16 | 370 | 5 | 322 | 3.71e-18 | 85.5 |
| MsG0380012698.01.T01 | AT2G24250 | 29.521 | 376 | 185 | 20 | 9 | 366 | 8 | 321 | 1.69e-17 | 84.0 |
| MsG0380012698.01.T01 | AT2G24250 | 29.521 | 376 | 185 | 20 | 9 | 366 | 8 | 321 | 1.69e-17 | 84.0 |
| MsG0380012698.01.T01 | AT1G44080 | 27.366 | 391 | 186 | 17 | 17 | 387 | 6 | 318 | 2.62e-17 | 83.2 |
| MsG0380012698.01.T01 | AT3G25750 | 26.154 | 390 | 228 | 15 | 15 | 401 | 4 | 336 | 7.90e-17 | 81.6 |
| MsG0380012698.01.T01 | AT3G25750 | 25.888 | 394 | 238 | 15 | 15 | 401 | 4 | 350 | 3.69e-16 | 79.7 |
| MsG0380012698.01.T01 | AT5G24040 | 26.941 | 219 | 130 | 6 | 196 | 411 | 93 | 284 | 7.34e-13 | 69.3 |
| MsG0380012698.01.T01 | AT5G24040 | 26.887 | 212 | 125 | 6 | 203 | 411 | 28 | 212 | 6.43e-12 | 65.1 |
Find 109 sgRNAs with CRISPR-Local
Find 138 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCTAACTATTCATATTTC+TGG | 0.115237 | 3:+22938893 | MsG0380012698.01.T01:CDS |
| GTGGGTGGAGGTGAGAAATT+TGG | 0.192240 | 3:+22939321 | MsG0380012698.01.T01:CDS |
| TCAAAAGGCGACGGCATTTC+AGG | 0.239414 | 3:-22938962 | None:intergenic |
| TCAACCAAGGGTTGTTGTTT+AGG | 0.248021 | 3:-22938640 | None:intergenic |
| TTGGTGGCTGAGCCTGTGTT+TGG | 0.257750 | 3:+22939070 | MsG0380012698.01.T01:CDS |
| TGGGTGGAGGTGAGAAATTT+GGG | 0.260533 | 3:+22939322 | MsG0380012698.01.T01:CDS |
| CAATGCAACCCGACCCATTC+TGG | 0.262695 | 3:-22939556 | None:intergenic |
| CAACCAAGGGTTGTTGTTTA+GGG | 0.264255 | 3:-22938639 | None:intergenic |
| GATGATGTTTGTGTATTTAA+AGG | 0.267409 | 3:+22938983 | MsG0380012698.01.T01:CDS |
| TGGTGGCTGAGCCTGTGTTT+GGG | 0.269301 | 3:+22939071 | MsG0380012698.01.T01:CDS |
| AACCCTTGGTTGATCAAAAT+TGG | 0.277845 | 3:+22938650 | MsG0380012698.01.T01:CDS |
| ATTAGTTGGAGGAGATCTTT+TGG | 0.284267 | 3:-22938395 | None:intergenic |
| GAGAGGGAAAGTGACGGTTT+TGG | 0.297750 | 3:-22938567 | None:intergenic |
| CATGTTATTCTAAGCTGTTT+TGG | 0.322069 | 3:+22939527 | MsG0380012698.01.T01:CDS |
| GCCGGATTTAAGTTTGGATT+TGG | 0.339771 | 3:+22939051 | MsG0380012698.01.T01:CDS |
| TCGGCTTCGGATTTGTGTAT+TGG | 0.348570 | 3:+22939388 | MsG0380012698.01.T01:CDS |
| AAAACACTGTTGCCAACGTC+TGG | 0.354370 | 3:-22939463 | None:intergenic |
| TTCTAACTATTCATATTTCT+GGG | 0.362456 | 3:+22938894 | MsG0380012698.01.T01:CDS |
| GTAGAATTCGCTGTCGAGTT+TGG | 0.365302 | 3:-22938423 | None:intergenic |
| AGGGTTTGATGATGATTTGT+GGG | 0.388934 | 3:-22938620 | None:intergenic |
| GGGAGGCCGGTTGCGGTTGA+TGG | 0.390016 | 3:+22939004 | MsG0380012698.01.T01:CDS |
| TGTTGGAATCGGAAGGAGTT+GGG | 0.391479 | 3:-22938532 | None:intergenic |
| GATTAGGAAAATGGTTCGTT+TGG | 0.405780 | 3:-22938591 | None:intergenic |
| TTCGATCCGTTTGTTCATCA+TGG | 0.405895 | 3:+22938456 | MsG0380012698.01.T01:CDS |
| CGGATTTGTGTATTGGCAAT+GGG | 0.407096 | 3:+22939395 | MsG0380012698.01.T01:CDS |
| CAAGTTCGATCACGTGAATC+AGG | 0.416098 | 3:-22938674 | None:intergenic |
| ATGATGTTTGTGTATTTAAA+GGG | 0.422574 | 3:+22938984 | MsG0380012698.01.T01:CDS |
| TAGGGTTTGATGATGATTTG+TGG | 0.423467 | 3:-22938621 | None:intergenic |
| TGAATACAGTTCGCTTTACA+TGG | 0.426125 | 3:+22938814 | MsG0380012698.01.T01:CDS |
| CGAGTTTGGAGGAAATTAGT+TGG | 0.429739 | 3:-22938409 | None:intergenic |
| CCGGTACCATCAACCGCAAC+CGG | 0.429771 | 3:-22939010 | None:intergenic |
| CTCGGACGCGAATTCGTCAT+TGG | 0.430105 | 3:+22938782 | MsG0380012698.01.T01:CDS |
| CACGTGATCGAACTTGTCTC+TGG | 0.438739 | 3:+22938681 | MsG0380012698.01.T01:CDS |
| GTTGAGGCCGGATTTAAGTT+TGG | 0.447301 | 3:+22939045 | MsG0380012698.01.T01:CDS |
| GGTGGCTGAGCCTGTGTTTG+GGG | 0.455725 | 3:+22939072 | MsG0380012698.01.T01:CDS |
| GGCCACCTCCAGAATGGGTC+GGG | 0.461818 | 3:+22939548 | MsG0380012698.01.T01:CDS |
| GGATTTAAGTTTGGATTTGG+TGG | 0.462545 | 3:+22939054 | MsG0380012698.01.T01:CDS |
| ACAACGTTAACATCAACATA+TGG | 0.462874 | 3:-22939196 | None:intergenic |
| GAGTGATGGTGAGTTATTGC+TGG | 0.465220 | 3:+22939117 | MsG0380012698.01.T01:CDS |
| TGTGACCAGTCTGCCATTGA+TGG | 0.465708 | 3:-22938368 | None:intergenic |
| ATTTAAAGGGAGGCCGGTTG+CGG | 0.466761 | 3:+22938997 | MsG0380012698.01.T01:CDS |
| GCCCTCAGCTTCTCCATCAA+TGG | 0.475161 | 3:+22938355 | MsG0380012698.01.T01:CDS |
| CTTCTCCATCAATGGCAGAC+TGG | 0.483544 | 3:+22938363 | MsG0380012698.01.T01:CDS |
| AAATGGTTCGTTTGGAGAGA+GGG | 0.484891 | 3:-22938583 | None:intergenic |
| AAACGGATCGAAAGCGGAGT+TGG | 0.485462 | 3:-22938445 | None:intergenic |
| TTTGGAATGATGGAGATTGT+TGG | 0.490044 | 3:-22938549 | None:intergenic |
| ACCAAATCCAAACTTAAATC+CGG | 0.492756 | 3:-22939052 | None:intergenic |
| TTGATGAGAAGGAGAAGAAG+TGG | 0.493041 | 3:+22939302 | MsG0380012698.01.T01:CDS |
| TCGGATTTGTGTATTGGCAA+TGG | 0.494110 | 3:+22939394 | MsG0380012698.01.T01:CDS |
| CAGTTCGCTTTACATGGAAA+AGG | 0.496017 | 3:+22938820 | MsG0380012698.01.T01:CDS |
| GAAGGAGTTGGGAGGTGAGA+AGG | 0.500796 | 3:-22938521 | None:intergenic |
| TAGGACTGTTGCGTTGAGGC+CGG | 0.505408 | 3:+22939033 | MsG0380012698.01.T01:CDS |
| AATACACAAACATCATCAAA+AGG | 0.505969 | 3:-22938977 | None:intergenic |
| TGGCCACCTCCAGAATGGGT+CGG | 0.507006 | 3:+22939547 | MsG0380012698.01.T01:CDS |
| GGGAGGAAAAGAACGTTGTT+CGG | 0.507213 | 3:+22938868 | MsG0380012698.01.T01:CDS |
| AAACACTGTTGCCAACGTCT+GGG | 0.515496 | 3:-22939462 | None:intergenic |
| GAAGGAGAAGAAGTGGGTGG+AGG | 0.515870 | 3:+22939309 | MsG0380012698.01.T01:CDS |
| ATGGAGAAGCTGAGGGCAAT+GGG | 0.518447 | 3:-22938349 | None:intergenic |
| TTGTTGGAATCGGAAGGAGT+TGG | 0.518905 | 3:-22938533 | None:intergenic |
| GTTTGGAGGAAATTAGTTGG+AGG | 0.521930 | 3:-22938406 | None:intergenic |
| TGATGAGAAGGAGAAGAAGT+GGG | 0.529612 | 3:+22939303 | MsG0380012698.01.T01:CDS |
| AACCCGACCCATTCTGGAGG+TGG | 0.530162 | 3:-22939550 | None:intergenic |
| TTGTCCTTGATGCTGACATG+TGG | 0.535434 | 3:+22938846 | MsG0380012698.01.T01:CDS |
| CCGGTTGCGGTTGATGGTAC+CGG | 0.543067 | 3:+22939010 | MsG0380012698.01.T01:CDS |
| AAACCCTAAACAACAACCCT+TGG | 0.548132 | 3:+22938636 | MsG0380012698.01.T01:CDS |
| GTGGCTGAGCCTGTGTTTGG+GGG | 0.548321 | 3:+22939073 | MsG0380012698.01.T01:CDS |
| GATGGTGAGATCTTTACGAT+TGG | 0.552078 | 3:+22939244 | MsG0380012698.01.T01:CDS |
| AAAATGGTTCGTTTGGAGAG+AGG | 0.554916 | 3:-22938584 | None:intergenic |
| GAATTCGCTGTCGAGTTTGG+AGG | 0.555492 | 3:-22938420 | None:intergenic |
| AACATCAACATATGGAACAT+TGG | 0.559274 | 3:-22939188 | None:intergenic |
| AGATCGCCATGATGAACAAA+CGG | 0.561635 | 3:-22938462 | None:intergenic |
| ATGATGGAGATTGTTGGAAT+CGG | 0.563108 | 3:-22938543 | None:intergenic |
| CTCCCCACATGTCAGCATCA+AGG | 0.563605 | 3:-22938850 | None:intergenic |
| TGCCATTGATGGAGAAGCTG+AGG | 0.563906 | 3:-22938357 | None:intergenic |
| CCTCAACGCAACAGTCCTAC+CGG | 0.565232 | 3:-22939029 | None:intergenic |
| GATGGAGAAGCTGAGGGCAA+TGG | 0.567702 | 3:-22938350 | None:intergenic |
| TGTCCTTGATGCTGACATGT+GGG | 0.568955 | 3:+22938847 | MsG0380012698.01.T01:CDS |
| ATGAACAAACGGATCGAAAG+CGG | 0.569539 | 3:-22938451 | None:intergenic |
| AACACTGTTGCCAACGTCTG+GGG | 0.570282 | 3:-22939461 | None:intergenic |
| GGGTTTGATGATGATTTGTG+GGG | 0.574505 | 3:-22938619 | None:intergenic |
| GGTGAGAAGGTAAAGTGAGA+TGG | 0.578010 | 3:-22938508 | None:intergenic |
| TGGAGATTGTTGGAATCGGA+AGG | 0.578902 | 3:-22938539 | None:intergenic |
| TTGTGTATTTAAAGGGAGGC+CGG | 0.579002 | 3:+22938991 | MsG0380012698.01.T01:CDS |
| TGTGTTTAAGCTTGATGAGA+AGG | 0.579426 | 3:+22939291 | MsG0380012698.01.T01:CDS |
| GATTGTTTGTCACGTGAGAG+AGG | 0.587049 | 3:-22938707 | None:intergenic |
| TGAGATCTTTACGATTGGAT+CGG | 0.588518 | 3:+22939249 | MsG0380012698.01.T01:CDS |
| GGTTTGATGATGATTTGTGG+GGG | 0.590244 | 3:-22938618 | None:intergenic |
| ATGTTTGTGTATTTAAAGGG+AGG | 0.595945 | 3:+22938987 | MsG0380012698.01.T01:CDS |
| TGAGAAGGAGAAGAAGTGGG+TGG | 0.596283 | 3:+22939306 | MsG0380012698.01.T01:CDS |
| GAACACCGTGTCATTGATCT+CGG | 0.599847 | 3:+22938764 | MsG0380012698.01.T01:CDS |
| CAAAACAGCTTAGAATAACA+TGG | 0.601491 | 3:-22939526 | None:intergenic |
| GTTTGATGATGATTTGTGGG+GGG | 0.603920 | 3:-22938617 | None:intergenic |
| TTCGAGGTGGTGATGAACGG+TGG | 0.623633 | 3:+22938930 | MsG0380012698.01.T01:CDS |
| GTCCTTGATGCTGACATGTG+GGG | 0.635481 | 3:+22938848 | MsG0380012698.01.T01:CDS |
| GAGAAGGTAAAGTGAGATGG+TGG | 0.636439 | 3:-22938505 | None:intergenic |
| TAACATGGAAAATCAGACAA+TGG | 0.639929 | 3:-22939511 | None:intergenic |
| GGGTGGAGGTGAGAAATTTG+GGG | 0.640626 | 3:+22939323 | MsG0380012698.01.T01:CDS |
| CGCGTCCGAGATCAATGACA+CGG | 0.641875 | 3:-22938769 | None:intergenic |
| GCCATTGATGGAGAAGCTGA+GGG | 0.643552 | 3:-22938356 | None:intergenic |
| TGGAATCGGAAGGAGTTGGG+AGG | 0.659759 | 3:-22938529 | None:intergenic |
| TTTGGAGAGAGGGAAAGTGA+CGG | 0.664216 | 3:-22938573 | None:intergenic |
| TCGTTGAAATTAATGATGTG+TGG | 0.668079 | 3:-22938743 | None:intergenic |
| TTGCGGTTGATGGTACCGGT+AGG | 0.670722 | 3:+22939014 | MsG0380012698.01.T01:CDS |
| TGCAACCCGACCCATTCTGG+AGG | 0.671792 | 3:-22939553 | None:intergenic |
| CAAACATCATCAAAAGGCGA+CGG | 0.682704 | 3:-22938971 | None:intergenic |
| CCGGTAGGACTGTTGCGTTG+AGG | 0.698141 | 3:+22939029 | MsG0380012698.01.T01:CDS |
| GGTGGAGGTGAGAAATTTGG+GGG | 0.715562 | 3:+22939324 | MsG0380012698.01.T01:CDS |
| CTTGATGCTGACATGTGGGG+AGG | 0.716182 | 3:+22938851 | MsG0380012698.01.T01:CDS |
| ATGATGTGTGGCGAATGAAG+AGG | 0.726884 | 3:-22938731 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATGATGTTTGTGTATTTAAA+GGG | + | Chr3:22938984-22939003 | MsG0380012698.01.T01:CDS | 20.0% |
| !! | TTCTAACTATTCATATTTCT+GGG | + | Chr3:22938894-22938913 | MsG0380012698.01.T01:CDS | 20.0% |
| ! | AATACACAAACATCATCAAA+AGG | - | Chr3:22938980-22938999 | None:intergenic | 25.0% |
| ! | CTTCTAACTATTCATATTTC+TGG | + | Chr3:22938893-22938912 | MsG0380012698.01.T01:CDS | 25.0% |
| ! | GATGATGTTTGTGTATTTAA+AGG | + | Chr3:22938983-22939002 | MsG0380012698.01.T01:CDS | 25.0% |
| !! | TTTTCGTGATGGTAATTTTT+TGG | + | Chr3:22939159-22939178 | MsG0380012698.01.T01:CDS | 25.0% |
| AACATCAACATATGGAACAT+TGG | - | Chr3:22939191-22939210 | None:intergenic | 30.0% | |
| ACAACGTTAACATCAACATA+TGG | - | Chr3:22939199-22939218 | None:intergenic | 30.0% | |
| ACCAAATCCAAACTTAAATC+CGG | - | Chr3:22939055-22939074 | None:intergenic | 30.0% | |
| ATGTTTGTGTATTTAAAGGG+AGG | + | Chr3:22938987-22939006 | MsG0380012698.01.T01:CDS | 30.0% | |
| CAAAACAGCTTAGAATAACA+TGG | - | Chr3:22939529-22939548 | None:intergenic | 30.0% | |
| TAACATGGAAAATCAGACAA+TGG | - | Chr3:22939514-22939533 | None:intergenic | 30.0% | |
| TCGTTGAAATTAATGATGTG+TGG | - | Chr3:22938746-22938765 | None:intergenic | 30.0% | |
| ! | CATGTTATTCTAAGCTGTTT+TGG | + | Chr3:22939527-22939546 | MsG0380012698.01.T01:CDS | 30.0% |
| !! | GGGAGATAAGAAATTTTTAG+TGG | + | Chr3:22939093-22939112 | MsG0380012698.01.T01:CDS | 30.0% |
| !!! | AAATTTTTAGTGGAGAGTGA+TGG | + | Chr3:22939103-22939122 | MsG0380012698.01.T01:CDS | 30.0% |
| !!! | TATTTGTCTTGTTTTCGTGA+TGG | + | Chr3:22939148-22939167 | MsG0380012698.01.T01:CDS | 30.0% |
| AACCCTTGGTTGATCAAAAT+TGG | + | Chr3:22938650-22938669 | MsG0380012698.01.T01:CDS | 35.0% | |
| GATTAGGAAAATGGTTCGTT+TGG | - | Chr3:22938594-22938613 | None:intergenic | 35.0% | |
| TGAATACAGTTCGCTTTACA+TGG | + | Chr3:22938814-22938833 | MsG0380012698.01.T01:CDS | 35.0% | |
| TGAGATCTTTACGATTGGAT+CGG | + | Chr3:22939249-22939268 | MsG0380012698.01.T01:CDS | 35.0% | |
| TGTGTTTAAGCTTGATGAGA+AGG | + | Chr3:22939291-22939310 | MsG0380012698.01.T01:CDS | 35.0% | |
| ! | ATGATGGAGATTGTTGGAAT+CGG | - | Chr3:22938546-22938565 | None:intergenic | 35.0% |
| ! | ATTAGTTGGAGGAGATCTTT+TGG | - | Chr3:22938398-22938417 | None:intergenic | 35.0% |
| ! | GGATTTAAGTTTGGATTTGG+TGG | + | Chr3:22939054-22939073 | MsG0380012698.01.T01:CDS | 35.0% |
| ! | TTAGTTGGAGGAGATCTTTT+GGG | - | Chr3:22938397-22938416 | None:intergenic | 35.0% |
| ! | TTTGGAATGATGGAGATTGT+TGG | - | Chr3:22938552-22938571 | None:intergenic | 35.0% |
| !! | AGATGGTGGTGATGATTTTT+GGG | - | Chr3:22938494-22938513 | None:intergenic | 35.0% |
| !! | AGGGTTTGATGATGATTTGT+GGG | - | Chr3:22938623-22938642 | None:intergenic | 35.0% |
| !! | GACCAATTTTGATCAACCAA+GGG | - | Chr3:22938655-22938674 | None:intergenic | 35.0% |
| !! | GATGTTGATGATGATGATGA+TGG | + | Chr3:22939226-22939245 | MsG0380012698.01.T01:CDS | 35.0% |
| !! | TAGGGTTTGATGATGATTTG+TGG | - | Chr3:22938624-22938643 | None:intergenic | 35.0% |
| !!! | AAAATTGCGTTTTTTCGAGG+TGG | + | Chr3:22938917-22938936 | MsG0380012698.01.T01:CDS | 35.0% |
| !!! | AGAATGTGCTTTTTCTGCTT+CGG | + | Chr3:22939369-22939388 | MsG0380012698.01.T01:CDS | 35.0% |
| !!! | GGATAGGGTTTTGTTTTTAG+GGG | + | Chr3:22939345-22939364 | MsG0380012698.01.T01:CDS | 35.0% |
| !!! | GGGATAGGGTTTTGTTTTTA+GGG | + | Chr3:22939344-22939363 | MsG0380012698.01.T01:CDS | 35.0% |
| AAAATGGTTCGTTTGGAGAG+AGG | - | Chr3:22938587-22938606 | None:intergenic | 40.0% | |
| AAACCCTAAACAACAACCCT+TGG | + | Chr3:22938636-22938655 | MsG0380012698.01.T01:CDS | 40.0% | |
| AAATGGTTCGTTTGGAGAGA+GGG | - | Chr3:22938586-22938605 | None:intergenic | 40.0% | |
| AGATCGCCATGATGAACAAA+CGG | - | Chr3:22938465-22938484 | None:intergenic | 40.0% | |
| ATGAACAAACGGATCGAAAG+CGG | - | Chr3:22938454-22938473 | None:intergenic | 40.0% | |
| CAAACATCATCAAAAGGCGA+CGG | - | Chr3:22938974-22938993 | None:intergenic | 40.0% | |
| CAGTTCGCTTTACATGGAAA+AGG | + | Chr3:22938820-22938839 | MsG0380012698.01.T01:CDS | 40.0% | |
| CGAGTTTGGAGGAAATTAGT+TGG | - | Chr3:22938412-22938431 | None:intergenic | 40.0% | |
| GATGGTGAGATCTTTACGAT+TGG | + | Chr3:22939244-22939263 | MsG0380012698.01.T01:CDS | 40.0% | |
| GTTTGGAGGAAATTAGTTGG+AGG | - | Chr3:22938409-22938428 | None:intergenic | 40.0% | |
| TGATGAGAAGGAGAAGAAGT+GGG | + | Chr3:22939303-22939322 | MsG0380012698.01.T01:CDS | 40.0% | |
| TTCGATCCGTTTGTTCATCA+TGG | + | Chr3:22938456-22938475 | MsG0380012698.01.T01:CDS | 40.0% | |
| TTGATGAGAAGGAGAAGAAG+TGG | + | Chr3:22939302-22939321 | MsG0380012698.01.T01:CDS | 40.0% | |
| TTGTGTATTTAAAGGGAGGC+CGG | + | Chr3:22938991-22939010 | MsG0380012698.01.T01:CDS | 40.0% | |
| ! | AATTTTCATTCCCCAGACGT+TGG | + | Chr3:22939451-22939470 | MsG0380012698.01.T01:CDS | 40.0% |
| ! | CGGATTTGTGTATTGGCAAT+GGG | + | Chr3:22939395-22939414 | MsG0380012698.01.T01:CDS | 40.0% |
| ! | GCCGGATTTAAGTTTGGATT+TGG | + | Chr3:22939051-22939070 | MsG0380012698.01.T01:CDS | 40.0% |
| ! | TCGGATTTGTGTATTGGCAA+TGG | + | Chr3:22939394-22939413 | MsG0380012698.01.T01:CDS | 40.0% |
| ! | TGGCAACAGTGTTTTTCACT+TGG | + | Chr3:22939471-22939490 | MsG0380012698.01.T01:CDS | 40.0% |
| !! | CAACCAAGGGTTGTTGTTTA+GGG | - | Chr3:22938642-22938661 | None:intergenic | 40.0% |
| !! | GAGATGGTGGTGATGATTTT+TGG | - | Chr3:22938495-22938514 | None:intergenic | 40.0% |
| !! | GGACCAATTTTGATCAACCA+AGG | - | Chr3:22938656-22938675 | None:intergenic | 40.0% |
| !! | GGGTTTGATGATGATTTGTG+GGG | - | Chr3:22938622-22938641 | None:intergenic | 40.0% |
| !! | GGTTTGATGATGATTTGTGG+GGG | - | Chr3:22938621-22938640 | None:intergenic | 40.0% |
| !! | GTGGTGATGATTTTTGGGAA+CGG | - | Chr3:22938489-22938508 | None:intergenic | 40.0% |
| !! | GTTTGATGATGATTTGTGGG+GGG | - | Chr3:22938620-22938639 | None:intergenic | 40.0% |
| !! | TCAACCAAGGGTTGTTGTTT+AGG | - | Chr3:22938643-22938662 | None:intergenic | 40.0% |
| !!! | AAGTGACGGTTTTGGAATGA+TGG | - | Chr3:22938562-22938581 | None:intergenic | 40.0% |
| !!! | GGGAAAATTGCGTTTTTTCG+AGG | + | Chr3:22938914-22938933 | MsG0380012698.01.T01:CDS | 40.0% |
| !!! | GGGGATAGGGTTTTGTTTTT+AGG | + | Chr3:22939343-22939362 | MsG0380012698.01.T01:CDS | 40.0% |
| !!! | TTTTTCGAGGTGGTGATGAA+CGG | + | Chr3:22938927-22938946 | MsG0380012698.01.T01:CDS | 40.0% |
| AAAACACTGTTGCCAACGTC+TGG | - | Chr3:22939466-22939485 | None:intergenic | 45.0% | |
| AAACACTGTTGCCAACGTCT+GGG | - | Chr3:22939465-22939484 | None:intergenic | 45.0% | |
| AGGTGAGAAATTTGGGGGAT+AGG | + | Chr3:22939329-22939348 | MsG0380012698.01.T01:CDS | 45.0% | |
| ATGATGTGTGGCGAATGAAG+AGG | - | Chr3:22938734-22938753 | None:intergenic | 45.0% | |
| CAAGTTCGATCACGTGAATC+AGG | - | Chr3:22938677-22938696 | None:intergenic | 45.0% | |
| GAGAAGGTAAAGTGAGATGG+TGG | - | Chr3:22938508-22938527 | None:intergenic | 45.0% | |
| GATTGTTTGTCACGTGAGAG+AGG | - | Chr3:22938710-22938729 | None:intergenic | 45.0% | |
| GGGAGGAAAAGAACGTTGTT+CGG | + | Chr3:22938868-22938887 | MsG0380012698.01.T01:CDS | 45.0% | |
| GGTGAGAAATTTGGGGGATA+GGG | + | Chr3:22939330-22939349 | MsG0380012698.01.T01:CDS | 45.0% | |
| GGTGAGAAGGTAAAGTGAGA+TGG | - | Chr3:22938511-22938530 | None:intergenic | 45.0% | |
| GTAGAATTCGCTGTCGAGTT+TGG | - | Chr3:22938426-22938445 | None:intergenic | 45.0% | |
| TCGGCTTCGGATTTGTGTAT+TGG | + | Chr3:22939388-22939407 | MsG0380012698.01.T01:CDS | 45.0% | |
| TGGAGATTGTTGGAATCGGA+AGG | - | Chr3:22938542-22938561 | None:intergenic | 45.0% | |
| TGGGTGGAGGTGAGAAATTT+GGG | + | Chr3:22939322-22939341 | MsG0380012698.01.T01:CDS | 45.0% | |
| TGTCCTTGATGCTGACATGT+GGG | + | Chr3:22938847-22938866 | MsG0380012698.01.T01:CDS | 45.0% | |
| TGTTGGAATCGGAAGGAGTT+GGG | - | Chr3:22938535-22938554 | None:intergenic | 45.0% | |
| TTCTTATCTCCCCCAAACAC+AGG | - | Chr3:22939085-22939104 | None:intergenic | 45.0% | |
| TTGTCCTTGATGCTGACATG+TGG | + | Chr3:22938846-22938865 | MsG0380012698.01.T01:CDS | 45.0% | |
| TTGTTGGAATCGGAAGGAGT+TGG | - | Chr3:22938536-22938555 | None:intergenic | 45.0% | |
| TTTGGAGAGAGGGAAAGTGA+CGG | - | Chr3:22938576-22938595 | None:intergenic | 45.0% | |
| ! | GAACACCGTGTCATTGATCT+CGG | + | Chr3:22938764-22938783 | MsG0380012698.01.T01:CDS | 45.0% |
| ! | GAGTGATGGTGAGTTATTGC+TGG | + | Chr3:22939117-22939136 | MsG0380012698.01.T01:CDS | 45.0% |
| ! | GTTGAGGCCGGATTTAAGTT+TGG | + | Chr3:22939045-22939064 | MsG0380012698.01.T01:CDS | 45.0% |
| !!! | TGCTTTTTCTGCTTCGGCTT+CGG | + | Chr3:22939375-22939394 | MsG0380012698.01.T01:CDS | 45.0% |
| AAACGGATCGAAAGCGGAGT+TGG | - | Chr3:22938448-22938467 | None:intergenic | 50.0% | |
| AACACTGTTGCCAACGTCTG+GGG | - | Chr3:22939464-22939483 | None:intergenic | 50.0% | |
| ATGGAGAAGCTGAGGGCAAT+GGG | - | Chr3:22938352-22938371 | None:intergenic | 50.0% | |
| ATTTAAAGGGAGGCCGGTTG+CGG | + | Chr3:22938997-22939016 | MsG0380012698.01.T01:CDS | 50.0% | |
| CACGTGATCGAACTTGTCTC+TGG | + | Chr3:22938681-22938700 | MsG0380012698.01.T01:CDS | 50.0% | |
| CTTCTCCATCAATGGCAGAC+TGG | + | Chr3:22938363-22938382 | MsG0380012698.01.T01:CDS | 50.0% | |
| GAATTCGCTGTCGAGTTTGG+AGG | - | Chr3:22938423-22938442 | None:intergenic | 50.0% | |
| GCCATTGATGGAGAAGCTGA+GGG | - | Chr3:22938359-22938378 | None:intergenic | 50.0% | |
| GGGTGGAGGTGAGAAATTTG+GGG | + | Chr3:22939323-22939342 | MsG0380012698.01.T01:CDS | 50.0% | |
| GGTGGAGGTGAGAAATTTGG+GGG | + | Chr3:22939324-22939343 | MsG0380012698.01.T01:CDS | 50.0% | |
| GTCCTTGATGCTGACATGTG+GGG | + | Chr3:22938848-22938867 | MsG0380012698.01.T01:CDS | 50.0% | |
| GTGGGTGGAGGTGAGAAATT+TGG | + | Chr3:22939321-22939340 | MsG0380012698.01.T01:CDS | 50.0% | |
| TCAAAAGGCGACGGCATTTC+AGG | - | Chr3:22938965-22938984 | None:intergenic | 50.0% | |
| TGAGAAGGAGAAGAAGTGGG+TGG | + | Chr3:22939306-22939325 | MsG0380012698.01.T01:CDS | 50.0% | |
| TGCCATTGATGGAGAAGCTG+AGG | - | Chr3:22938360-22938379 | None:intergenic | 50.0% | |
| TGTGACCAGTCTGCCATTGA+TGG | - | Chr3:22938371-22938390 | None:intergenic | 50.0% | |
| ! | GAGAGGGAAAGTGACGGTTT+TGG | - | Chr3:22938570-22938589 | None:intergenic | 50.0% |
| ! | GATTTGTGGGGGGTGTGATT+AGG | - | Chr3:22938610-22938629 | None:intergenic | 50.0% |
| ! | GGGGGGTGTGATTAGGAAAA+TGG | - | Chr3:22938603-22938622 | None:intergenic | 50.0% |
| !! | GTTTTGGCCACCTCCAGAAT+GGG | + | Chr3:22939543-22939562 | MsG0380012698.01.T01:CDS | 50.0% |
| !!! | TGTTTTGGCCACCTCCAGAA+TGG | + | Chr3:22939542-22939561 | MsG0380012698.01.T01:CDS | 50.0% |
| CAATGCAACCCGACCCATTC+TGG | - | Chr3:22939559-22939578 | None:intergenic | 55.0% | |
| CCTCAACGCAACAGTCCTAC+CGG | - | Chr3:22939032-22939051 | None:intergenic | 55.0% | |
| CGCGTCCGAGATCAATGACA+CGG | - | Chr3:22938772-22938791 | None:intergenic | 55.0% | |
| CTCCCCACATGTCAGCATCA+AGG | - | Chr3:22938853-22938872 | None:intergenic | 55.0% | |
| CTCGGACGCGAATTCGTCAT+TGG | + | Chr3:22938782-22938801 | MsG0380012698.01.T01:CDS | 55.0% | |
| CTTGATGCTGACATGTGGGG+AGG | + | Chr3:22938851-22938870 | MsG0380012698.01.T01:CDS | 55.0% | |
| GAAGGAGAAGAAGTGGGTGG+AGG | + | Chr3:22939309-22939328 | MsG0380012698.01.T01:CDS | 55.0% | |
| GAAGGAGTTGGGAGGTGAGA+AGG | - | Chr3:22938524-22938543 | None:intergenic | 55.0% | |
| GATGGAGAAGCTGAGGGCAA+TGG | - | Chr3:22938353-22938372 | None:intergenic | 55.0% | |
| GCCCTCAGCTTCTCCATCAA+TGG | + | Chr3:22938355-22938374 | MsG0380012698.01.T01:CDS | 55.0% | |
| TAGGACTGTTGCGTTGAGGC+CGG | + | Chr3:22939033-22939052 | MsG0380012698.01.T01:CDS | 55.0% | |
| TGGAATCGGAAGGAGTTGGG+AGG | - | Chr3:22938532-22938551 | None:intergenic | 55.0% | |
| TGGTGGCTGAGCCTGTGTTT+GGG | + | Chr3:22939071-22939090 | MsG0380012698.01.T01:CDS | 55.0% | |
| ! | TTCGAGGTGGTGATGAACGG+TGG | + | Chr3:22938930-22938949 | MsG0380012698.01.T01:CDS | 55.0% |
| ! | TTGGTGGCTGAGCCTGTGTT+TGG | + | Chr3:22939070-22939089 | MsG0380012698.01.T01:CDS | 55.0% |
| !! | TTGCGGTTGATGGTACCGGT+AGG | + | Chr3:22939014-22939033 | MsG0380012698.01.T01:CDS | 55.0% |
| CCGGTACCATCAACCGCAAC+CGG | - | Chr3:22939013-22939032 | None:intergenic | 60.0% | |
| CCGGTAGGACTGTTGCGTTG+AGG | + | Chr3:22939029-22939048 | MsG0380012698.01.T01:CDS | 60.0% | |
| GGTGGCTGAGCCTGTGTTTG+GGG | + | Chr3:22939072-22939091 | MsG0380012698.01.T01:CDS | 60.0% | |
| GTGGCTGAGCCTGTGTTTGG+GGG | + | Chr3:22939073-22939092 | MsG0380012698.01.T01:CDS | 60.0% | |
| TGCAACCCGACCCATTCTGG+AGG | - | Chr3:22939556-22939575 | None:intergenic | 60.0% | |
| TGGCCACCTCCAGAATGGGT+CGG | + | Chr3:22939547-22939566 | MsG0380012698.01.T01:CDS | 60.0% | |
| ! | AACCCGACCCATTCTGGAGG+TGG | - | Chr3:22939553-22939572 | None:intergenic | 60.0% |
| !! | CCGGTTGCGGTTGATGGTAC+CGG | + | Chr3:22939010-22939029 | MsG0380012698.01.T01:CDS | 60.0% |
| GGCCACCTCCAGAATGGGTC+GGG | + | Chr3:22939548-22939567 | MsG0380012698.01.T01:CDS | 65.0% | |
| GGGAGGCCGGTTGCGGTTGA+TGG | + | Chr3:22939004-22939023 | MsG0380012698.01.T01:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr3 | gene | 22938335 | 22939579 | 22938335 | ID=MsG0380012698.01;Name=MsG0380012698.01 |
| Chr3 | mRNA | 22938335 | 22939579 | 22938335 | ID=MsG0380012698.01.T01;Parent=MsG0380012698.01;Name=MsG0380012698.01.T01;_AED=0.46;_eAED=0.46;_QI=0|-1|0|1|-1|1|1|0|414 |
| Chr3 | exon | 22938335 | 22939579 | 22938335 | ID=MsG0380012698.01.T01:exon:8484;Parent=MsG0380012698.01.T01 |
| Chr3 | CDS | 22938335 | 22939579 | 22938335 | ID=MsG0380012698.01.T01:cds;Parent=MsG0380012698.01.T01 |
| Gene Sequence |
| Protein sequence |
