AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380015738.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380015738.01.T01 MTR_3g075500 49.819 277 53 5 1 191 15 291 4.25e-71 217
MsG0380015738.01.T01 MTR_3g075500 45.703 256 53 5 1 170 15 270 4.72e-55 176
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 74 sgRNAs with CRISPR-Local

Find 352 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACAAATAAATAACAGTAAAA+TGG 0.277176 3:+74473173 None:intergenic
AGAAGAAGGTGGTTTGGATT+TGG 0.291116 3:+74475255 None:intergenic
TACTCAAAAGGAGCCGCGTC+TGG 0.295336 3:+74473309 None:intergenic
TTTCATGTTTACAGTACATT+TGG 0.321138 3:-74471062 MsG0380015738.01.T01:three_prime_UTR
GTAATACTCAAGAAATTTAA+TGG 0.324425 3:+74473025 None:intergenic
ACTGGTCGATCACGTGGATT+TGG 0.332826 3:-74473626 MsG0380015738.01.T01:CDS
GAGATGGAGATTGAGGGGTT+TGG 0.346796 3:+74475223 None:intergenic
GATTGAGGGGTTTGGAGGGA+AGG 0.360326 3:+74475231 None:intergenic
GAAGGGAGAAGAAGGTGGTT+TGG 0.377829 3:+74475249 None:intergenic
AGTTTCAGCGGCGTCGGTAG+TGG 0.390558 3:+74475095 None:intergenic
ATGGAGATTGAGGGGTTTGG+AGG 0.396602 3:+74475226 None:intergenic
GAGGAAGCAAAATTATTTGT+TGG 0.402885 3:-74475024 MsG0380015738.01.T01:CDS
GGAAGAGGGATGAGAGGAGC+AGG 0.408056 3:+74475281 None:intergenic
GATGCCATTGCCGCTCTTGA+TGG 0.408798 3:-74473570 MsG0380015738.01.T01:CDS
TGATGGAGAGATGGAGATTG+AGG 0.421108 3:+74475216 None:intergenic
GGAGTAGCCGGTTTCATGCT+AGG 0.428274 3:-74473201 MsG0380015738.01.T01:three_prime_UTR
ATAACTCTAGCAGTTGATAT+AGG 0.441480 3:+74473270 None:intergenic
TTTGGAGGGAAGGGAGAAGA+AGG 0.441974 3:+74475241 None:intergenic
ATTGAGGGGTTTGGAGGGAA+GGG 0.448793 3:+74475232 None:intergenic
CGCTCGGGTCGAGATCCTTT+AGG 0.452976 3:+74473793 None:intergenic
GTTTGGATTTGGAGTGGAAG+AGG 0.455077 3:+74475266 None:intergenic
GCCGCGTCTGGGCCTGTCTT+CGG 0.457397 3:+74473321 None:intergenic
TGGAGATTGAGGGGTTTGGA+GGG 0.458466 3:+74475227 None:intergenic
CATTGCCGCTCTTGATGGTC+AGG 0.460084 3:-74473565 MsG0380015738.01.T01:intron
GTTTCAGCGGCGTCGGTAGT+GGG 0.462898 3:+74475096 None:intergenic
TTCTCACTATCAACATCAAA+AGG 0.466331 3:+74474995 None:intergenic
GGATAAACCTAGCATGAAAC+CGG 0.474197 3:+74473194 None:intergenic
GAGTGAGCGTTGCCGAAGAC+AGG 0.476254 3:-74473333 MsG0380015738.01.T01:CDS
ACCACATAAATTCTTATGAC+AGG 0.477243 3:+74473742 None:intergenic
GATGGAGAGATGGAGATTGA+GGG 0.487203 3:+74475217 None:intergenic
AGGTGCACGCTCAGTACGCT+CGG 0.489901 3:+74473777 None:intergenic
TGGAGTGGAAGAGGGATGAG+AGG 0.490997 3:+74475275 None:intergenic
GTTAACAAGGCTTCTCCTAA+AGG 0.492516 3:-74473808 MsG0380015738.01.T01:CDS
ACCTGTCATAAGAATTTATG+TGG 0.493099 3:-74473743 MsG0380015738.01.T01:intron
GGAGGGAAGGGAGAAGAAGG+TGG 0.502522 3:+74475244 None:intergenic
CATTGCAGAGTTTGGAGGGT+AGG 0.503587 3:-74473363 MsG0380015738.01.T01:intron
TTTGGATTTGGAGTGGAAGA+GGG 0.505129 3:+74475267 None:intergenic
CCCTTGTTCGTTGCTCAAGA+AGG 0.508002 3:-74475174 MsG0380015738.01.T01:CDS
GGGATGAGAGGAGCAGGAAT+CGG 0.513089 3:+74475287 None:intergenic
GGACTACGATGGAAGATCAT+TGG 0.515924 3:-74473833 MsG0380015738.01.T01:CDS
TTATTTGTGTTTAATAGTTG+AGG 0.518493 3:-74473251 MsG0380015738.01.T01:three_prime_UTR
TGCTTCATTGCAGAGTTTGG+AGG 0.526764 3:-74473368 MsG0380015738.01.T01:intron
ACTCAAAAGGAGCCGCGTCT+GGG 0.529406 3:+74473310 None:intergenic
CTGACCATCAAGAGCGGCAA+TGG 0.534062 3:+74473566 None:intergenic
AAGATCATTGGCTGTTAACA+AGG 0.537173 3:-74473821 MsG0380015738.01.T01:CDS
AAGCTGGATTGAGTCTCGAT+GGG 0.545353 3:-74475122 MsG0380015738.01.T01:CDS
GTAGTCTATGATAGAGAGAC+TGG 0.551457 3:-74473644 MsG0380015738.01.T01:intron
ATGGAGAGATGGAGATTGAG+GGG 0.552843 3:+74475218 None:intergenic
GCAGAGGTGGAGAGTAGGCA+TGG 0.553538 3:-74473083 MsG0380015738.01.T01:three_prime_UTR
GAAGCTGGATTGAGTCTCGA+TGG 0.553613 3:-74475123 MsG0380015738.01.T01:CDS
GCCGCTGAAACTGAAACCGC+TGG 0.556988 3:-74475084 MsG0380015738.01.T01:CDS
AGACTGCAGAGGTGGAGAGT+AGG 0.558940 3:-74473088 MsG0380015738.01.T01:three_prime_UTR
GCCTTCTTGAGCAACGAACA+AGG 0.561779 3:+74475173 None:intergenic
AAGGTGGTTTGGATTTGGAG+TGG 0.563883 3:+74475260 None:intergenic
TACTTGACGAGCTACTCAAA+AGG 0.564061 3:+74473297 None:intergenic
ACTTCTCTAGACGAAGAAGC+TGG 0.568501 3:-74475138 MsG0380015738.01.T01:CDS
AGCTTCTTCGTCTAGAGAAG+TGG 0.569747 3:+74475140 None:intergenic
GGTTTCAGTTTCAGCGGCGT+CGG 0.571354 3:+74475089 None:intergenic
AGAGGAGCAGGAATCGGCCA+TGG 0.588829 3:+74475293 None:intergenic
TGCTAGAAGTCTATAAAACT+CGG 0.590668 3:-74473049 MsG0380015738.01.T01:three_prime_UTR
GCTTCATTGCAGAGTTTGGA+GGG 0.592688 3:-74473367 MsG0380015738.01.T01:intron
AGAGAGACTGGTCGATCACG+TGG 0.593334 3:-74473632 MsG0380015738.01.T01:CDS
ACAAGGGAGAGAAGAGCGGT+TGG 0.605646 3:+74475190 None:intergenic
GGTGCACGCTCAGTACGCTC+GGG 0.609107 3:+74473778 None:intergenic
GCCGAAGACAGGCCCAGACG+CGG 0.612716 3:-74473322 MsG0380015738.01.T01:CDS
ACCAGCGGTTTCAGTTTCAG+CGG 0.623350 3:+74475083 None:intergenic
CAGAGGTGGAGAGTAGGCAT+GGG 0.630670 3:-74473082 MsG0380015738.01.T01:three_prime_UTR
TTCAGCAGAATCATCACCAG+CGG 0.638086 3:+74475068 None:intergenic
CCTTCTTGAGCAACGAACAA+GGG 0.648260 3:+74475174 None:intergenic
ACGAACAAGGGAGAGAAGAG+CGG 0.671530 3:+74475186 None:intergenic
TTCATGTGACAGGACTACGA+TGG 0.694681 3:-74473844 MsG0380015738.01.T01:intron
AGCTGGATTGAGTCTCGATG+GGG 0.703789 3:-74475121 MsG0380015738.01.T01:CDS
TTATACCTGACCATCAAGAG+CGG 0.726743 3:+74473560 None:intergenic
ATGACAGGTTCAAAACTGCG+AGG 0.748725 3:+74473757 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TCAAAAAATTTAAGTTTTTT+AGG + Chr3:74473573-74473592 None:intergenic 10.0%
!! AATAATTTGAGAAAATTGAA+TGG - Chr3:74471865-74471884 MsG0380015738.01.T01:intron 15.0%
!! AATATTACAATTTAGTCATA+CGG + Chr3:74472216-74472235 None:intergenic 15.0%
!! ACAAATAAATAACAGTAAAA+TGG + Chr3:74473146-74473165 None:intergenic 15.0%
!! ATTCATTATTTATGTTATTC+TGG + Chr3:74473858-74473877 None:intergenic 15.0%
!! GTAAAATGGAAAAAAAAATA+GGG - Chr3:74475187-74475206 MsG0380015738.01.T01:CDS 15.0%
!! TTGTTAGATTTCTTATTATA+TGG - Chr3:74472276-74472295 MsG0380015738.01.T01:intron 15.0%
!!! AACATAAATAATGAATCTTT+TGG - Chr3:74473862-74473881 MsG0380015738.01.T01:intron 15.0%
!!! ACATAAATAATGAATCTTTT+GGG - Chr3:74473863-74473882 MsG0380015738.01.T01:intron 15.0%
!! AATTTCATTTGAACTTACAT+AGG + Chr3:74471577-74471596 None:intergenic 20.0%
!! AGAAAATGAACCATATTTAT+AGG + Chr3:74474580-74474599 None:intergenic 20.0%
!! ATAGGATTAGAAATAGATTT+AGG - Chr3:74474930-74474949 MsG0380015738.01.T01:intron 20.0%
!! CATAATCAATGTAAACTATA+AGG - Chr3:74471680-74471699 MsG0380015738.01.T01:intron 20.0%
!! CTAGATTTACAAAAAAAGTT+TGG + Chr3:74474032-74474051 None:intergenic 20.0%
!! GAAAATGAACCATATTTATA+GGG + Chr3:74474579-74474598 None:intergenic 20.0%
!! GAAATCTAACAAGAAAAAAA+TGG + Chr3:74472268-74472287 None:intergenic 20.0%
!! GGTAAAATGGAAAAAAAAAT+AGG - Chr3:74475186-74475205 MsG0380015738.01.T01:CDS 20.0%
!! GTAATACTCAAGAAATTTAA+TGG + Chr3:74473294-74473313 None:intergenic 20.0%
!! TAACACATTCTAAATTATAG+TGG - Chr3:74471614-74471633 MsG0380015738.01.T01:intron 20.0%
!! TTATTTGTGTTTAATAGTTG+AGG - Chr3:74473065-74473084 MsG0380015738.01.T01:three_prime_UTR 20.0%
!!! AAAAAAATGGCATTGTTTTA+AGG + Chr3:74472255-74472274 None:intergenic 20.0%
!!! AAAAAGTTTTTCAAACGTTT+TGG - Chr3:74474484-74474503 MsG0380015738.01.T01:intron 20.0%
!!! AAAAGTTTTTCAAACGTTTT+GGG - Chr3:74474485-74474504 MsG0380015738.01.T01:intron 20.0%
!!! ACTCTTATATAATTTTCTTC+TGG - Chr3:74473094-74473113 MsG0380015738.01.T01:three_prime_UTR 20.0%
!!! ACTTTTTTTGTAAATCTAGA+AGG - Chr3:74474033-74474052 MsG0380015738.01.T01:intron 20.0%
!!! ATGCTATTTGAGTTTTTTTT+TGG - Chr3:74471415-74471434 MsG0380015738.01.T01:intron 20.0%
!!! ATTGTTGTTATTGTTGTTTT+AGG - Chr3:74471457-74471476 MsG0380015738.01.T01:intron 20.0%
!!! TAAGTTTTAAAAGCGTTTTT+TGG + Chr3:74473720-74473739 None:intergenic 20.0%
!!! TTTGAAAAACTTTTTCTTTG+TGG + Chr3:74474479-74474498 None:intergenic 20.0%
!!! TTTTTGAAGAAATGTAAGAA+AGG - Chr3:74473586-74473605 MsG0380015738.01.T01:CDS 20.0%
! AAAATTATATGAGGTGGTTT+AGG - Chr3:74472125-74472144 MsG0380015738.01.T01:intron 25.0%
! ACATTTCGGATTATATAATC+CGG + Chr3:74473800-74473819 None:intergenic 25.0%
! AGGTTATTATAACAGAGAAA+CGG - Chr3:74471477-74471496 MsG0380015738.01.T01:intron 25.0%
! ATAAATCCGAAAACATAATC+CGG - Chr3:74475157-74475176 MsG0380015738.01.T01:CDS 25.0%
! ATTTGGAAAATTATATGAGG+TGG - Chr3:74472119-74472138 MsG0380015738.01.T01:intron 25.0%
! CTTTACTCTTGAATGAAATA+TGG - Chr3:74471947-74471966 MsG0380015738.01.T01:intron 25.0%
! GAAAAACTAACAATCTTGTT+CGG + Chr3:74473387-74473406 None:intergenic 25.0%
! TATAGCTTATGTAATAGGAT+AGG - Chr3:74474912-74474931 MsG0380015738.01.T01:intron 25.0%
! TATTAGTAGTTTCAATGTGT+CGG + Chr3:74471849-74471868 None:intergenic 25.0%
! TTTCATGTTTACAGTACATT+TGG - Chr3:74475254-74475273 MsG0380015738.01.T01:CDS 25.0%
!! CCTCATATAATTTTCCAAAT+CGG + Chr3:74472119-74472138 None:intergenic 25.0%
!! GAAGGGAATATGATTTTTAT+GGG - Chr3:74472842-74472861 MsG0380015738.01.T01:intron 25.0%
!! TGAAGGGAATATGATTTTTA+TGG - Chr3:74472841-74472860 MsG0380015738.01.T01:intron 25.0%
!! TGTAAAAAAACGTTTTTGAC+CGG - Chr3:74474519-74474538 MsG0380015738.01.T01:intron 25.0%
!! TTAGAACTTTTGCAATTGTA+AGG + Chr3:74475096-74475115 None:intergenic 25.0%
!!! AAATAATGAATCTTTTGGGA+AGG - Chr3:74473867-74473886 MsG0380015738.01.T01:intron 25.0%
!!! AACAAGATTGTTAGTTTTTC+CGG - Chr3:74473387-74473406 MsG0380015738.01.T01:intron 25.0%
!!! AAGTTTTTTAGGTAGCTTTT+GGG + Chr3:74473562-74473581 None:intergenic 25.0%
!!! ATTCATTTTTCTTGCTTTCT+TGG - Chr3:74472013-74472032 MsG0380015738.01.T01:intron 25.0%
!!! GCTTTTAAAACTTAACTAAC+CGG - Chr3:74473726-74473745 MsG0380015738.01.T01:intron 25.0%
!!! GTATTTTTGGAATTTTTGCA+GGG + Chr3:74473344-74473363 None:intergenic 25.0%
!!! TAAGTTTTTTAGGTAGCTTT+TGG + Chr3:74473563-74473582 None:intergenic 25.0%
!!! TACTTGTTTTAGGCTATAAA+AGG + Chr3:74473650-74473669 None:intergenic 25.0%
!!! TTTTAAAAGCGTTTTTTGGA+CGG + Chr3:74473716-74473735 None:intergenic 25.0%
!!! TTTTTGTTGTTGTGTTTTCT+TGG - Chr3:74472438-74472457 MsG0380015738.01.T01:intron 25.0%
AAAAATTCCAAAAATACCCC+TGG - Chr3:74473347-74473366 MsG0380015738.01.T01:CDS 30.0%
AAAGAACTCAAGATAGGATT+AGG + Chr3:74471931-74471950 None:intergenic 30.0%
AAGAGTAAAGAACTCAAGAT+AGG + Chr3:74471937-74471956 None:intergenic 30.0%
AATGAACCATATTTATAGGG+AGG + Chr3:74474576-74474595 None:intergenic 30.0%
AATGTCGATATTTCAAGCTA+TGG - Chr3:74471638-74471657 MsG0380015738.01.T01:intron 30.0%
ACCACATAAATTCTTATGAC+AGG + Chr3:74472577-74472596 None:intergenic 30.0%
ACCTGTCATAAGAATTTATG+TGG - Chr3:74472573-74472592 MsG0380015738.01.T01:intron 30.0%
ACTATATAGTATGCGTTCTA+AGG + Chr3:74472088-74472107 None:intergenic 30.0%
ACTGGTATAGCTTATGTAAT+AGG - Chr3:74474907-74474926 MsG0380015738.01.T01:intron 30.0%
ATGAACCATATTTATAGGGA+GGG + Chr3:74474575-74474594 None:intergenic 30.0%
ATTTGTCCGAATTTATGTTC+CGG + Chr3:74473409-74473428 None:intergenic 30.0%
CATAAAATCTTAGTGCAATG+TGG - Chr3:74474259-74474278 MsG0380015738.01.T01:intron 30.0%
CTATATAGTATGCGTTCTAA+GGG + Chr3:74472087-74472106 None:intergenic 30.0%
GACATGTTATGGAAATTGAA+GGG - Chr3:74472825-74472844 MsG0380015738.01.T01:intron 30.0%
GAGGAAGCAAAATTATTTGT+TGG - Chr3:74471292-74471311 MsG0380015738.01.T01:intron 30.0%
GGATTTATTGCAGATATATC+CGG + Chr3:74475145-74475164 None:intergenic 30.0%
GTACTTTGCTAAATTATCAG+TGG - Chr3:74472785-74472804 MsG0380015738.01.T01:intron 30.0%
GTTCTAATAAAACACTGTTC+TGG - Chr3:74475109-74475128 MsG0380015738.01.T01:CDS 30.0%
TACAATTTAGTCATACGGAT+TGG + Chr3:74472211-74472230 None:intergenic 30.0%
TACATGTTTACTGTTGTCAT+TGG - Chr3:74472396-74472415 MsG0380015738.01.T01:intron 30.0%
TATAGCCTAAAACAAGTACT+AGG - Chr3:74473652-74473671 MsG0380015738.01.T01:intron 30.0%
TATTACATAAGCTATACCAG+TGG + Chr3:74474908-74474927 None:intergenic 30.0%
TGACATGTTATGGAAATTGA+AGG - Chr3:74472824-74472843 MsG0380015738.01.T01:intron 30.0%
TGCTAGAAGTCTATAAAACT+CGG - Chr3:74473267-74473286 MsG0380015738.01.T01:three_prime_UTR 30.0%
TTCTCACTATCAACATCAAA+AGG + Chr3:74471324-74471343 None:intergenic 30.0%
TTGTCTTTCTTTGATGTCAA+GGG - Chr3:74473442-74473461 MsG0380015738.01.T01:intron 30.0%
TTTCCATCTTGAACAAATAG+AGG - Chr3:74471973-74471992 MsG0380015738.01.T01:intron 30.0%
TTTCCTCTATTTGTTCAAGA+TGG + Chr3:74471979-74471998 None:intergenic 30.0%
TTTGTCTTTCTTTGATGTCA+AGG - Chr3:74473441-74473460 MsG0380015738.01.T01:intron 30.0%
! AAATTTTTGTCATCAAGCTC+AGG + Chr3:74474147-74474166 None:intergenic 30.0%
! ACAAATAATTTTGCTTCCTC+AGG + Chr3:74471292-74471311 None:intergenic 30.0%
! ATAACTCTAGCAGTTGATAT+AGG + Chr3:74473049-74473068 None:intergenic 30.0%
! CATTGCACTAAGATTTTATG+TGG + Chr3:74474259-74474278 None:intergenic 30.0%
! CTTGATGACAAAAATTTGCA+TGG - Chr3:74474150-74474169 MsG0380015738.01.T01:intron 30.0%
! GTGACAACCATTTTGAATTT+TGG - Chr3:74471897-74471916 MsG0380015738.01.T01:intron 30.0%
! GTTTTTCCGGAACATAAATT+CGG - Chr3:74473400-74473419 MsG0380015738.01.T01:intron 30.0%
! TTTTATAGACTTCTAGCAAG+AGG + Chr3:74473265-74473284 None:intergenic 30.0%
!! AAAATTTGCATGGTTTGCTT+TGG - Chr3:74474160-74474179 MsG0380015738.01.T01:intron 30.0%
!! AATCACCTAGTACTTGTTTT+AGG + Chr3:74473660-74473679 None:intergenic 30.0%
!! AGACACATAAGAAGTATTAC+AGG + Chr3:74472040-74472059 None:intergenic 30.0%
!! CCGATTTGGAAAATTATATG+AGG - Chr3:74472116-74472135 MsG0380015738.01.T01:intron 30.0%
!! GCATTGATAATGACATGTTA+TGG - Chr3:74472814-74472833 MsG0380015738.01.T01:intron 30.0%
!! TGATGTTGATAGTGAGAAAT+TGG - Chr3:74471326-74471345 MsG0380015738.01.T01:intron 30.0%
!!! AGTTTTTAGTGAACATGGTA+AGG - Chr3:74472635-74472654 MsG0380015738.01.T01:intron 30.0%
!!! GGTATTTTTGGAATTTTTGC+AGG + Chr3:74473345-74473364 None:intergenic 30.0%
AAGGATGTGAAGAAGAATGA+AGG - Chr3:74473605-74473624 MsG0380015738.01.T01:CDS 35.0%
AATTGCAGGTTCATAGGAAA+CGG - Chr3:74473507-74473526 MsG0380015738.01.T01:intron 35.0%
ACATACTTTGTATGAAGCAC+TGG + Chr3:74472165-74472184 None:intergenic 35.0%
ACCAGCACCAAAATTCAAAA+TGG + Chr3:74471907-74471926 None:intergenic 35.0%
AGATAAGATGCAATGAAAGC+TGG - Chr3:74471723-74471742 MsG0380015738.01.T01:intron 35.0%
ATTATAACAGAGAAACGGAC+CGG - Chr3:74471482-74471501 MsG0380015738.01.T01:intron 35.0%
ATTCCGGAAAAAGACGATAA+TGG + Chr3:74474380-74474399 None:intergenic 35.0%
ATTGAAGATCAAAACGGAGA+GGG - Chr3:74474203-74474222 MsG0380015738.01.T01:intron 35.0%
ATTGCATTGTTCATGAGAAG+AGG + Chr3:74473983-74474002 None:intergenic 35.0%
CGAAATGTATGCAGTATTTC+CGG - Chr3:74473812-74473831 MsG0380015738.01.T01:CDS 35.0%
CGGAAATACTGCATACATTT+CGG + Chr3:74473814-74473833 None:intergenic 35.0%
CTACTATTATCAACTTCCCA+TGG + Chr3:74472606-74472625 None:intergenic 35.0%
GAAGAAGAAAATCTGTTGGT+GGG + Chr3:74474824-74474843 None:intergenic 35.0%
GCAGTACAGAAGATATAATC+CGG + Chr3:74474428-74474447 None:intergenic 35.0%
TATAGTTGCAATCTCCGATT+TGG - Chr3:74472102-74472121 MsG0380015738.01.T01:intron 35.0%
TATTGAAGATCAAAACGGAG+AGG - Chr3:74474202-74474221 MsG0380015738.01.T01:intron 35.0%
TCTTATGAACTCGATCATGT+CGG + Chr3:74473959-74473978 None:intergenic 35.0%
TCTTGTTCGGAAATGTAATC+CGG + Chr3:74473374-74473393 None:intergenic 35.0%
TGAACCATATTTATAGGGAG+GGG + Chr3:74474574-74474593 None:intergenic 35.0%
TGAAGAAGAAAATCTGTTGG+TGG + Chr3:74474825-74474844 None:intergenic 35.0%
TTACATAGGCGTTAAACTTC+TGG + Chr3:74471563-74471582 None:intergenic 35.0%
TTCCGGAAAAAGACGATAAT+GGG + Chr3:74474379-74474398 None:intergenic 35.0%
! AAGATCATTGGCTGTTAACA+AGG - Chr3:74472495-74472514 MsG0380015738.01.T01:intron 35.0%
! AATAATTTTGCTTCCTCAGG+TGG + Chr3:74471289-74471308 None:intergenic 35.0%
! ATTTATGTGGTAACTTGCCA+TGG - Chr3:74472586-74472605 MsG0380015738.01.T01:intron 35.0%
! CAGCATAGGATTCTTTTGTA+TGG + Chr3:74474286-74474305 None:intergenic 35.0%
! GCTGGTATTGAAGATCAAAA+CGG - Chr3:74474197-74474216 MsG0380015738.01.T01:intron 35.0%
! TTGTTGTGTTTTCTTGGTTC+TGG - Chr3:74472444-74472463 MsG0380015738.01.T01:intron 35.0%
! TTTATGTGGTAACTTGCCAT+GGG - Chr3:74472587-74472606 MsG0380015738.01.T01:intron 35.0%
! TTTTTCCGGAATACGTTATC+CGG - Chr3:74474388-74474407 MsG0380015738.01.T01:intron 35.0%
!! ACCATTTTGAATTTTGGTGC+TGG - Chr3:74471903-74471922 MsG0380015738.01.T01:intron 35.0%
!! AGTTTTTCAAACGTTTTGGG+CGG - Chr3:74474488-74474507 MsG0380015738.01.T01:intron 35.0%
!! CATGGGAAGTTGATAATAGT+AGG - Chr3:74472604-74472623 MsG0380015738.01.T01:intron 35.0%
!! CTGTTCTGGAATATACAATC+CGG - Chr3:74475123-74475142 MsG0380015738.01.T01:CDS 35.0%
!! GTTTTAGGCTATAAAAGGCT+TGG + Chr3:74473645-74473664 None:intergenic 35.0%
!! TAATGAATCTTTTGGGAAGG+TGG - Chr3:74473870-74473889 MsG0380015738.01.T01:intron 35.0%
!! TATGTTATTCTGGTGCCATT+CGG + Chr3:74473848-74473867 None:intergenic 35.0%
!!! ATATATTTTGACAGCATGCC+AGG - Chr3:74474063-74474082 MsG0380015738.01.T01:intron 35.0%
!!! GAGCAAGTTTTTAGTGAACA+TGG - Chr3:74472630-74472649 MsG0380015738.01.T01:intron 35.0%
!!! TAATTTTCTTCTGGAGTAGC+CGG - Chr3:74473103-74473122 MsG0380015738.01.T01:three_prime_UTR 35.0%
AACGTCCCAAGTTTCACTTT+GGG - Chr3:74474349-74474368 MsG0380015738.01.T01:intron 40.0%
AAGAGGCCTCTTTCTATGAA+AGG + Chr3:74474669-74474688 None:intergenic 40.0%
AAGTTGTTACTGAGTGCTTC+CGG - Chr3:74473778-74473797 MsG0380015738.01.T01:CDS 40.0%
AATCCTATGCTGAAGCAATC+CGG - Chr3:74474294-74474313 MsG0380015738.01.T01:intron 40.0%
AATTGCATTGCAGCTTGTGT+GGG + Chr3:74473491-74473510 None:intergenic 40.0%
ATATGATCGGTCAATAGGGT+GGG - Chr3:74474708-74474727 MsG0380015738.01.T01:intron 40.0%
ATGTGCTTCATTGCAGAGTT+TGG - Chr3:74472945-74472964 MsG0380015738.01.T01:intron 40.0%
CAATGCAATTGCAGGTTCAT+AGG - Chr3:74473501-74473520 MsG0380015738.01.T01:intron 40.0%
CGAAAACATAATCCGGACAA+GGG - Chr3:74475164-74475183 MsG0380015738.01.T01:CDS 40.0%
CGGTGAAGAAGAAAATCTGT+TGG + Chr3:74474828-74474847 None:intergenic 40.0%
CTTGTGTGGGGTTCATATAA+CGG + Chr3:74473478-74473497 None:intergenic 40.0%
GAAAACATAATCCGGACAAG+GGG - Chr3:74475165-74475184 MsG0380015738.01.T01:CDS 40.0%
GAAACACATCGTTGTAGAAG+AGG + Chr3:74474638-74474657 None:intergenic 40.0%
GAAAGAGAAAAAGACTGCAG+AGG - Chr3:74473217-74473236 MsG0380015738.01.T01:three_prime_UTR 40.0%
GAACCATATTTATAGGGAGG+GGG + Chr3:74474573-74474592 None:intergenic 40.0%
GCCATTCGGACTATATAATC+CGG + Chr3:74473834-74473853 None:intergenic 40.0%
GGAGAAGAGAAGAAAGAAGA+AGG + Chr3:74474617-74474636 None:intergenic 40.0%
GGATAAACCTAGCATGAAAC+CGG + Chr3:74473125-74473144 None:intergenic 40.0%
GGTCATATGATCGGTCAATA+GGG - Chr3:74474704-74474723 MsG0380015738.01.T01:intron 40.0%
GGTGTATTTATAGAGGTCCT+TGG - Chr3:74474224-74474243 MsG0380015738.01.T01:intron 40.0%
GTAGTCTATGATAGAGAGAC+TGG - Chr3:74472672-74472691 MsG0380015738.01.T01:intron 40.0%
GTCGATATTTCAAGCTATGG+TGG - Chr3:74471641-74471660 MsG0380015738.01.T01:intron 40.0%
GTTAACAAGGCTTCTCCTAA+AGG - Chr3:74472508-74472527 MsG0380015738.01.T01:intron 40.0%
TAACCCCCTCCCTATAAATA+TGG - Chr3:74474567-74474586 MsG0380015738.01.T01:intron 40.0%
TACTTGACGAGCTACTCAAA+AGG + Chr3:74473022-74473041 None:intergenic 40.0%
TATAGAGGTCCTTGGATGTT+TGG - Chr3:74474232-74474251 MsG0380015738.01.T01:intron 40.0%
TCCGGAAAAAGACGATAATG+GGG + Chr3:74474378-74474397 None:intergenic 40.0%
TCCGGATTATATAGTCCGAA+TGG - Chr3:74473830-74473849 MsG0380015738.01.T01:CDS 40.0%
TGACGACATTATGAAGATCC+TGG + Chr3:74474084-74474103 None:intergenic 40.0%
TGACGTTTCACCAAAAGGTT+TGG + Chr3:74473752-74473771 None:intergenic 40.0%
TGCCAATGACATGTTACGAT+CGG - Chr3:74473929-74473948 MsG0380015738.01.T01:intron 40.0%
TGTTACCTCAGCAATCTCAA+CGG + Chr3:74471375-74471394 None:intergenic 40.0%
TTATACCTGACCATCAAGAG+CGG + Chr3:74472759-74472778 None:intergenic 40.0%
TTATGTGGTCCAAACATCCA+AGG + Chr3:74474244-74474263 None:intergenic 40.0%
TTCATAGAAAGAGGCCTCTT+TGG - Chr3:74474669-74474688 MsG0380015738.01.T01:intron 40.0%
TTTATGGGCTCGTGTTGAAT+GGG - Chr3:74472857-74472876 MsG0380015738.01.T01:intron 40.0%
! ACCCCATTATCGTCTTTTTC+CGG - Chr3:74474374-74474393 MsG0380015738.01.T01:intron 40.0%
! AGAAGAAGGTGGTTTGGATT+TGG + Chr3:74471064-74471083 None:intergenic 40.0%
! CCTTGTCCGGATTATGTTTT+CGG + Chr3:74475166-74475185 None:intergenic 40.0%
! TGATTTTGTTGAACCACCTG+AGG - Chr3:74471273-74471292 MsG0380015738.01.T01:intron 40.0%
! TTTCCATTTTACCCCTTGTC+CGG + Chr3:74475179-74475198 None:intergenic 40.0%
! TTTGGATTTGGAGTGGAAGA+GGG + Chr3:74471052-74471071 None:intergenic 40.0%
! TTTTATGGGCTCGTGTTGAA+TGG - Chr3:74472856-74472875 MsG0380015738.01.T01:intron 40.0%
!! CATACGGATTGGAGTTTCAA+TGG + Chr3:74472200-74472219 None:intergenic 40.0%
!! GTTGGTTCGGATTGTAAATC+CGG + Chr3:74474316-74474335 None:intergenic 40.0%
AAAAAAAAATAGGGCGCGCG+AGG - Chr3:74475196-74475215 MsG0380015738.01.T01:CDS 45.0%
AAGCTGGATTGAGTCTCGAT+GGG - Chr3:74471194-74471213 MsG0380015738.01.T01:intron 45.0%
AATCCGGACAAGGGGTAAAA+TGG - Chr3:74475173-74475192 MsG0380015738.01.T01:CDS 45.0%
AATCCGGATTGCTTCAGCAT+AGG + Chr3:74474300-74474319 None:intergenic 45.0%
AATGACATGTTACGATCGGC+AGG - Chr3:74473933-74473952 MsG0380015738.01.T01:intron 45.0%
ACAACGATGTGTTTCCATCG+TGG - Chr3:74474643-74474662 MsG0380015738.01.T01:intron 45.0%
ACAAGCTGCAATGCAATTGC+AGG - Chr3:74473493-74473512 MsG0380015738.01.T01:intron 45.0%
ACCCTCTTTCTCTTCATCAG+TGG - Chr3:74474865-74474884 MsG0380015738.01.T01:intron 45.0%
ACTGATGAAGAGAAAGAGGG+TGG + Chr3:74474866-74474885 None:intergenic 45.0%
ACTTCTCTAGACGAAGAAGC+TGG - Chr3:74471178-74471197 MsG0380015738.01.T01:intron 45.0%
AGAGAAAAAGACTGCAGAGG+TGG - Chr3:74473220-74473239 MsG0380015738.01.T01:three_prime_UTR 45.0%
AGCATCAGGGGTCATATGAT+CGG - Chr3:74474695-74474714 MsG0380015738.01.T01:intron 45.0%
AGCCACTGATGAAGAGAAAG+AGG + Chr3:74474870-74474889 None:intergenic 45.0%
AGCTTCTTCGTCTAGAGAAG+TGG + Chr3:74471179-74471198 None:intergenic 45.0%
ATGACAGGTTCAAAACTGCG+AGG + Chr3:74472562-74472581 None:intergenic 45.0%
ATGATGTCAACATGACACCC+AGG + Chr3:74474761-74474780 None:intergenic 45.0%
ATGGAGAGATGGAGATTGAG+GGG + Chr3:74471101-74471120 None:intergenic 45.0%
ATTGCATTGCAGCTTGTGTG+GGG + Chr3:74473490-74473509 None:intergenic 45.0%
CAAATCCAAAACCACGACTC+CGG + Chr3:74471504-74471523 None:intergenic 45.0%
CAACGTCCCAAGTTTCACTT+TGG - Chr3:74474348-74474367 MsG0380015738.01.T01:intron 45.0%
CAATTGCATTGCAGCTTGTG+TGG + Chr3:74473492-74473511 None:intergenic 45.0%
CATATGATCGGTCAATAGGG+TGG - Chr3:74474707-74474726 MsG0380015738.01.T01:intron 45.0%
CCGAAAACATAATCCGGACA+AGG - Chr3:74475163-74475182 MsG0380015738.01.T01:CDS 45.0%
CCTTCTTGAGCAACGAACAA+GGG + Chr3:74471145-74471164 None:intergenic 45.0%
CGTAGTCCTGTCACATGAAA+TGG + Chr3:74472471-74472490 None:intergenic 45.0%
CTGATGAAGAGAAAGAGGGT+GGG + Chr3:74474865-74474884 None:intergenic 45.0%
CTTTCTATGAAAGGCCACGA+TGG + Chr3:74474660-74474679 None:intergenic 45.0%
GAAACTTGGGACGTTGTGTA+TGG + Chr3:74474344-74474363 None:intergenic 45.0%
GAGGGGGTTAAAAAACGTGT+GGG + Chr3:74474557-74474576 None:intergenic 45.0%
GATCGTAACATGTCATTGGC+AGG + Chr3:74473930-74473949 None:intergenic 45.0%
GATGGAGAGATGGAGATTGA+GGG + Chr3:74471102-74471121 None:intergenic 45.0%
GCATTCCGGATAACGTATTC+CGG + Chr3:74474396-74474415 None:intergenic 45.0%
GCCACTGATGAAGAGAAAGA+GGG + Chr3:74474869-74474888 None:intergenic 45.0%
GCTTCATTGCAGAGTTTGGA+GGG - Chr3:74472949-74472968 MsG0380015738.01.T01:intron 45.0%
GGACTACGATGGAAGATCAT+TGG - Chr3:74472483-74472502 MsG0380015738.01.T01:intron 45.0%
GGGTCATATGATCGGTCAAT+AGG - Chr3:74474703-74474722 MsG0380015738.01.T01:intron 45.0%
GGTGTCCCAAAGTGAAACTT+GGG + Chr3:74474357-74474376 None:intergenic 45.0%
GTTTCACCAAAAGGTTTGGC+CGG + Chr3:74473748-74473767 None:intergenic 45.0%
TATGATCGGTCAATAGGGTG+GGG - Chr3:74474709-74474728 MsG0380015738.01.T01:intron 45.0%
TCCGGAATGCATGTGTTATC+CGG - Chr3:74474406-74474425 MsG0380015738.01.T01:intron 45.0%
TCCGGATAACACATGCATTC+CGG + Chr3:74474410-74474429 None:intergenic 45.0%
TCGTGGCCTTTCATAGAAAG+AGG - Chr3:74474660-74474679 MsG0380015738.01.T01:intron 45.0%
TCTGGTCCATTTCATGTGAC+AGG - Chr3:74472462-74472481 MsG0380015738.01.T01:intron 45.0%
TCTTTCTATGCTGTCGCGAA+TGG + Chr3:74474123-74474142 None:intergenic 45.0%
TCTTTCTCTTCATCAGTGGC+TGG - Chr3:74474869-74474888 MsG0380015738.01.T01:intron 45.0%
TGATGGAGAGATGGAGATTG+AGG + Chr3:74471103-74471122 None:intergenic 45.0%
TGCCGATCGTAACATGTCAT+TGG + Chr3:74473934-74473953 None:intergenic 45.0%
TGCTTCATTGCAGAGTTTGG+AGG - Chr3:74472948-74472967 MsG0380015738.01.T01:intron 45.0%
TGTACTGCACCAGAAGCTTT+AGG - Chr3:74474440-74474459 MsG0380015738.01.T01:intron 45.0%
TTCAGCAGAATCATCACCAG+CGG + Chr3:74471251-74471270 None:intergenic 45.0%
TTCATGTGACAGGACTACGA+TGG - Chr3:74472472-74472491 MsG0380015738.01.T01:intron 45.0%
TTCCAAAAATACCCCTGGTC+CGG - Chr3:74473352-74473371 MsG0380015738.01.T01:CDS 45.0%
TTTGGGAAGGTGGTTTGAAG+AGG - Chr3:74473880-74473899 MsG0380015738.01.T01:intron 45.0%
! AACTAACCGGCCAAACCTTT+TGG - Chr3:74473739-74473758 MsG0380015738.01.T01:intron 45.0%
! AAGGTGGTTTGGATTTGGAG+TGG + Chr3:74471059-74471078 None:intergenic 45.0%
! ACCTTTTGGTGAAACGTCAC+TGG - Chr3:74473753-74473772 MsG0380015738.01.T01:CDS 45.0%
! CGGAGAGGGTGTATTTATAG+AGG - Chr3:74474217-74474236 MsG0380015738.01.T01:intron 45.0%
! GCTTTTGAACTCGATCTTGC+CGG - Chr3:74473904-74473923 MsG0380015738.01.T01:intron 45.0%
! GGTCAGTTTGAATCTGAGGT+TGG - Chr3:74474731-74474750 MsG0380015738.01.T01:intron 45.0%
! GTTTGGATTTGGAGTGGAAG+AGG + Chr3:74471053-74471072 None:intergenic 45.0%
! TGGGTGTCATGTTGACATCA+TGG - Chr3:74474760-74474779 MsG0380015738.01.T01:intron 45.0%
! TTCCGGCTTGTTCAAAAGCA+TGG + Chr3:74471352-74471371 None:intergenic 45.0%
! TTGGTGTGTGTGTGTTTTGC+TGG - Chr3:74474179-74474198 MsG0380015738.01.T01:intron 45.0%
!! AATCTGAGGTTGGTTTGCCT+GGG - Chr3:74474741-74474760 MsG0380015738.01.T01:intron 45.0%
!! ACGTTTTTGACCGGCATTGA+TGG - Chr3:74474528-74474547 MsG0380015738.01.T01:intron 45.0%
!! CCTCTTTGGAAAAGCATCAG+GGG - Chr3:74474683-74474702 MsG0380015738.01.T01:intron 45.0%
!! GCCTCTTTGGAAAAGCATCA+GGG - Chr3:74474682-74474701 MsG0380015738.01.T01:intron 45.0%
!! GGAAGCACTCAGTAACAACT+TGG + Chr3:74473779-74473798 None:intergenic 45.0%
!! TGGGAGTGTTTGTGATGTCA+TGG + Chr3:74473543-74473562 None:intergenic 45.0%
!! TTTTCAAACGTTTTGGGCGG+TGG - Chr3:74474491-74474510 MsG0380015738.01.T01:intron 45.0%
!!! AGAAGAGCGGTTGGTTTTGA+TGG + Chr3:74471120-74471139 None:intergenic 45.0%
!!! GGTTGGTTTTGATGGAGAGA+TGG + Chr3:74471112-74471131 None:intergenic 45.0%
ACCAGCGGTTTCAGTTTCAG+CGG + Chr3:74471236-74471255 None:intergenic 50.0%
ACGAACAAGGGAGAGAAGAG+CGG + Chr3:74471133-74471152 None:intergenic 50.0%
ACGTTGTGTATGGTGAGGGT+TGG + Chr3:74474334-74474353 None:intergenic 50.0%
ACTGGTCGATCACGTGGATT+TGG - Chr3:74472690-74472709 MsG0380015738.01.T01:intron 50.0%
AGCTGGATTGAGTCTCGATG+GGG - Chr3:74471195-74471214 MsG0380015738.01.T01:intron 50.0%
ATGAAGAGAAAGAGGGTGGG+AGG + Chr3:74474862-74474881 None:intergenic 50.0%
ATGATCGGTCAATAGGGTGG+GGG - Chr3:74474710-74474729 MsG0380015738.01.T01:intron 50.0%
ATGGAGATTGAGGGGTTTGG+AGG + Chr3:74471093-74471112 None:intergenic 50.0%
ATTGAGGGGTTTGGAGGGAA+GGG + Chr3:74471087-74471106 None:intergenic 50.0%
CAGCAGACTCGCTTCTTCAA+CGG + Chr3:74471539-74471558 None:intergenic 50.0%
CATGGTCTCTTGTTCCCTAG+AGG - Chr3:74474778-74474797 MsG0380015738.01.T01:intron 50.0%
CATTGCAGAGTTTGGAGGGT+AGG - Chr3:74472953-74472972 MsG0380015738.01.T01:intron 50.0%
CCCTTGTTCGTTGCTCAAGA+AGG - Chr3:74471142-74471161 MsG0380015738.01.T01:intron 50.0%
CGGAAATGTAATCCGGACCA+GGG + Chr3:74473367-74473386 None:intergenic 50.0%
CTCAGCAATCTCAACGGTTC+CGG + Chr3:74471369-74471388 None:intergenic 50.0%
GAAGCTGGATTGAGTCTCGA+TGG - Chr3:74471193-74471212 MsG0380015738.01.T01:intron 50.0%
GAAGGGAGAAGAAGGTGGTT+TGG + Chr3:74471070-74471089 None:intergenic 50.0%
GAGATGGAGATTGAGGGGTT+TGG + Chr3:74471096-74471115 None:intergenic 50.0%
GCCAGTGACGTTTCACCAAA+AGG + Chr3:74473757-74473776 None:intergenic 50.0%
GCCTTCTTGAGCAACGAACA+AGG + Chr3:74471146-74471165 None:intergenic 50.0%
GGAAATGTAATCCGGACCAG+GGG + Chr3:74473366-74473385 None:intergenic 50.0%
GGAGGGGGTTAAAAAACGTG+TGG + Chr3:74474558-74474577 None:intergenic 50.0%
GGGGTTAAAAAACGTGTGGG+AGG + Chr3:74474554-74474573 None:intergenic 50.0%
GGGTGTCCCAAAGTGAAACT+TGG + Chr3:74474358-74474377 None:intergenic 50.0%
GTAACATGTCATTGGCAGGC+CGG + Chr3:74473926-74473945 None:intergenic 50.0%
TCGGAAATGTAATCCGGACC+AGG + Chr3:74473368-74473387 None:intergenic 50.0%
TGGAGATTGAGGGGTTTGGA+GGG + Chr3:74471092-74471111 None:intergenic 50.0%
TGGGACGTTGTGTATGGTGA+GGG + Chr3:74474338-74474357 None:intergenic 50.0%
TGGGGGTCAGTTTGAATCTG+AGG - Chr3:74474727-74474746 MsG0380015738.01.T01:intron 50.0%
TTGGGACGTTGTGTATGGTG+AGG + Chr3:74474339-74474358 None:intergenic 50.0%
TTTGGAGGGAAGGGAGAAGA+AGG + Chr3:74471078-74471097 None:intergenic 50.0%
! AATCTGTTGGTGGGAGACAG+AGG + Chr3:74474815-74474834 None:intergenic 50.0%
! ATCTGTTGGTGGGAGACAGA+GGG + Chr3:74474814-74474833 None:intergenic 50.0%
! CCCCTGATGCTTTTCCAAAG+AGG + Chr3:74474686-74474705 None:intergenic 50.0%
! GGCCATGCTTTTGAACAAGC+CGG - Chr3:74471347-74471366 MsG0380015738.01.T01:intron 50.0%
!! CTGCACCAGAAGCTTTAGGT+CGG - Chr3:74474444-74474463 MsG0380015738.01.T01:intron 50.0%
!! GAATCTGAGGTTGGTTTGCC+TGG - Chr3:74474740-74474759 MsG0380015738.01.T01:intron 50.0%
!! GGCCTCTTTGGAAAAGCATC+AGG - Chr3:74474681-74474700 MsG0380015738.01.T01:intron 50.0%
!! GTGTATGGTGAGGGTTGGTT+CGG + Chr3:74474329-74474348 None:intergenic 50.0%
!!! ATCCGGACCAGGGGTATTTT+TGG + Chr3:74473357-74473376 None:intergenic 50.0%
AAAATAGGGCGCGCGAGGAA+AGG - Chr3:74475201-74475220 MsG0380015738.01.T01:CDS 55.0%
ACAAGGGAGAGAAGAGCGGT+TGG + Chr3:74471129-74471148 None:intergenic 55.0%
ACTCAAAAGGAGCCGCGTCT+GGG + Chr3:74473009-74473028 None:intergenic 55.0%
AGACTGCAGAGGTGGAGAGT+AGG - Chr3:74473228-74473247 MsG0380015738.01.T01:three_prime_UTR 55.0%
ATCAGTGGCTGGAGTAGAGC+TGG - Chr3:74474880-74474899 MsG0380015738.01.T01:intron 55.0%
CAGAGGTGGAGAGTAGGCAT+GGG - Chr3:74473234-74473253 MsG0380015738.01.T01:three_prime_UTR 55.0%
CGGAACCGTTGAGATTGCTG+AGG - Chr3:74471367-74471386 MsG0380015738.01.T01:intron 55.0%
CTGACCATCAAGAGCGGCAA+TGG + Chr3:74472753-74472772 None:intergenic 55.0%
GACCACCGACCTAAAGCTTC+TGG + Chr3:74474452-74474471 None:intergenic 55.0%
GAGGGTGGGAGGAAAGAAGA+TGG + Chr3:74474851-74474870 None:intergenic 55.0%
GATGCCATTGCCGCTCTTGA+TGG - Chr3:74472746-74472765 MsG0380015738.01.T01:intron 55.0%
GATTGAGGGGTTTGGAGGGA+AGG + Chr3:74471088-74471107 None:intergenic 55.0%
GGGATGAGAGGAGCAGGAAT+CGG + Chr3:74471032-74471051 None:intergenic 55.0%
GGTGGGAGGAAAGAAGATGG+CGG + Chr3:74474848-74474867 None:intergenic 55.0%
GGTTTCAGTTTCAGCGGCGT+CGG + Chr3:74471230-74471249 None:intergenic 55.0%
TACTCAAAAGGAGCCGCGTC+TGG + Chr3:74473010-74473029 None:intergenic 55.0%
TGGAGTGGAAGAGGGATGAG+AGG + Chr3:74471044-74471063 None:intergenic 55.0%
! AGAGAGACTGGTCGATCACG+TGG - Chr3:74472684-74472703 MsG0380015738.01.T01:intron 55.0%
! CATTGCCGCTCTTGATGGTC+AGG - Chr3:74472751-74472770 MsG0380015738.01.T01:intron 55.0%
! GGAGTAGCCGGTTTCATGCT+AGG - Chr3:74473115-74473134 MsG0380015738.01.T01:three_prime_UTR 55.0%
! TCTGTTGGTGGGAGACAGAG+GGG + Chr3:74474813-74474832 None:intergenic 55.0%
!! CACCAGAAGCTTTAGGTCGG+TGG - Chr3:74474447-74474466 MsG0380015738.01.T01:intron 55.0%
AGAGAAACGGACCGGAGTCG+TGG - Chr3:74471490-74471509 MsG0380015738.01.T01:intron 60.0%
AGGTGCACGCTCAGTACGCT+CGG + Chr3:74472542-74472561 None:intergenic 60.0%
CGCTCGGGTCGAGATCCTTT+AGG + Chr3:74472526-74472545 None:intergenic 60.0%
GCAGAGGTGGAGAGTAGGCA+TGG - Chr3:74473233-74473252 MsG0380015738.01.T01:three_prime_UTR 60.0%
GCCGCTGAAACTGAAACCGC+TGG - Chr3:74471232-74471251 MsG0380015738.01.T01:intron 60.0%
GGAAGAGGGATGAGAGGAGC+AGG + Chr3:74471038-74471057 None:intergenic 60.0%
GGAGGGAAGGGAGAAGAAGG+TGG + Chr3:74471075-74471094 None:intergenic 60.0%
GTGTGGGAGGCCATCAATGC+CGG + Chr3:74474541-74474560 None:intergenic 60.0%
TCCCACCCTATGCCTTCTCG+CGG - Chr3:74473317-74473336 MsG0380015738.01.T01:CDS 60.0%
TGGAGTAGAGCTGGAGCCAC+TGG - Chr3:74474889-74474908 MsG0380015738.01.T01:intron 60.0%
! ACGGACCGGAGTCGTGGTTT+TGG - Chr3:74471496-74471515 MsG0380015738.01.T01:intron 60.0%
! CGCGAGGAAAGGCATAGGGT+GGG - Chr3:74475212-74475231 MsG0380015738.01.T01:CDS 60.0%
! CTGTTGGTGGGAGACAGAGG+GGG + Chr3:74474812-74474831 None:intergenic 60.0%
! GAGTGAGCGTTGCCGAAGAC+AGG - Chr3:74472983-74473002 MsG0380015738.01.T01:intron 60.0%
! TTTTTGCAGGGCCCGCGAGA+AGG + Chr3:74473332-74473351 None:intergenic 60.0%
!! AGTTTCAGCGGCGTCGGTAG+TGG + Chr3:74471224-74471243 None:intergenic 60.0%
!! GTTTCAGCGGCGTCGGTAGT+GGG + Chr3:74471223-74471242 None:intergenic 60.0%
CCCACCCTATGCCTTCTCGC+GGG - Chr3:74473318-74473337 MsG0380015738.01.T01:CDS 65.0%
GGTGCACGCTCAGTACGCTC+GGG + Chr3:74472541-74472560 None:intergenic 65.0%
! AGGGCCCGCGAGAAGGCATA+GGG + Chr3:74473325-74473344 None:intergenic 65.0%
! CCCGCGAGAAGGCATAGGGT+GGG + Chr3:74473321-74473340 None:intergenic 65.0%
! GCGCGAGGAAAGGCATAGGG+TGG - Chr3:74475211-74475230 MsG0380015738.01.T01:CDS 65.0%
! GGCGCGCGAGGAAAGGCATA+GGG - Chr3:74475208-74475227 MsG0380015738.01.T01:CDS 65.0%
! TGGGAGACAGAGGGGGCACA+GGG + Chr3:74474805-74474824 None:intergenic 65.0%
GCCGAAGACAGGCCCAGACG+CGG - Chr3:74472994-74473013 MsG0380015738.01.T01:intron 70.0%
GCCGCGTCTGGGCCTGTCTT+CGG + Chr3:74472998-74473017 None:intergenic 70.0%
! AGGGGGCACAGGGGCCTCTA+GGG + Chr3:74474795-74474814 None:intergenic 70.0%
! CAGGGCCCGCGAGAAGGCAT+AGG + Chr3:74473326-74473345 None:intergenic 70.0%
! GCCCGCGAGAAGGCATAGGG+TGG + Chr3:74473322-74473341 None:intergenic 70.0%
! GGGAGACAGAGGGGGCACAG+GGG + Chr3:74474804-74474823 None:intergenic 70.0%
! GGGCGCGCGAGGAAAGGCAT+AGG - Chr3:74475207-74475226 MsG0380015738.01.T01:CDS 70.0%
! GTGGGAGACAGAGGGGGCAC+AGG + Chr3:74474806-74474825 None:intergenic 70.0%
! GAGGGGGCACAGGGGCCTCT+AGG + Chr3:74474796-74474815 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr3 gene 74471025 74475313 74471025 ID=MsG0380015738.01;Name=MsG0380015738.01
Chr3 mRNA 74471025 74475313 74471025 ID=MsG0380015738.01.T01;Parent=MsG0380015738.01;Name=MsG0380015738.01.T01;_AED=0.46;_eAED=0.46;_QI=0|0.5|0.4|1|0|0|5|336|191
Chr3 exon 74471025 74471082 74471025 ID=MsG0380015738.01.T01:exon:14349;Parent=MsG0380015738.01.T01
Chr3 exon 74473034 74473377 74473034 ID=MsG0380015738.01.T01:exon:14348;Parent=MsG0380015738.01.T01
Chr3 exon 74473566 74473652 74473566 ID=MsG0380015738.01.T01:exon:14347;Parent=MsG0380015738.01.T01
Chr3 exon 74473744 74473854 74473744 ID=MsG0380015738.01.T01:exon:14346;Parent=MsG0380015738.01.T01
Chr3 exon 74475002 74475313 74475002 ID=MsG0380015738.01.T01:exon:14345;Parent=MsG0380015738.01.T01
Chr3 CDS 74475002 74475313 74475002 ID=MsG0380015738.01.T01:cds;Parent=MsG0380015738.01.T01
Chr3 CDS 74473744 74473854 74473744 ID=MsG0380015738.01.T01:cds;Parent=MsG0380015738.01.T01
Chr3 CDS 74473566 74473652 74473566 ID=MsG0380015738.01.T01:cds;Parent=MsG0380015738.01.T01
Chr3 CDS 74473312 74473377 74473312 ID=MsG0380015738.01.T01:cds;Parent=MsG0380015738.01.T01
Chr3 three_prime_UTR 74473034 74473311 74473034 ID=MsG0380015738.01.T01:three_prime_utr;Parent=MsG0380015738.01.T01
Chr3 three_prime_UTR 74471025 74471082 74471025 ID=MsG0380015738.01.T01:three_prime_utr;Parent=MsG0380015738.01.T01
Gene Sequence

>MsG0380015738.01.T01

ATGGCCGATTCCTGCTCCTCTCATCCCTCTTCCACTCCAAATCCAAACCACCTTCTTCTCCCTTCCCTCCAAACCCCTCAATCTCCATCTCTCCATCAAAACCAACCGCTCTTCTCTCCCTTGTTCGTTGCTCAAGAAGGCGACACGCTCACCACTTCTCTAGACGAAGAAGCTGGATTGAGTCTCGATGGGGAGCCCACTACCGACGCCGCTGAAACTGAAACCGCTGGTGATGATTCTGCTGAAGCTGATTTTGTTGAACCACCTGAGGAAGCAAAATTATTTGTTGGTAATTGCCTTTTGATGTTGATAGACTACGATGGAAGATCATTGGCTGTTAACAAGGCTTCTCCTAAAGGATCTCGACCCGAGCGTACTGAGCGTGCACCTCGCAGTTTTGAACCTGTCATAAGAATTTATGTGAGAGACTGGTCGATCACGTGGATTTGGCTTTGTCACAATGTCGATGAAACTGAAATGAATGATGCCATTGCCGCTCTTGATGGTCAGAGTTTGGAGGGTAGGACAATAAGAGTGAGCGTTGCCGAAGACAGGCCCAGACGCGGCTCCTTTTGA
Protein sequence

>MsG0380015738.01.T01

MADSCSSHPSSTPNPNHLLLPSLQTPQSPSLHQNQPLFSPLFVAQEGDTLTTSLDEEAGLSLDGEPTTDAAETETAGDDSAEADFVEPPEEAKLFVGNCLLMLIDYDGRSLAVNKASPKGSRPERTERAPRSFEPVIRIYVRDWSITWIWLCHNVDETEMNDAIAALDGQSLEGRTIRVSVAEDRPRRGSF*