AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780040105.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040105.01.T01 MTR_7g084560 74.580 476 44 8 1 403 100 571 0.0 658
MsG0780040105.01.T01 MTR_7g084560 85.915 71 10 0 341 411 588 658 8.62e-33 131
MsG0780040105.01.T01 MTR_1g031140 31.646 237 124 6 138 341 531 762 4.35e-21 96.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040105.01.T01 AT3G02060 63.125 480 96 8 1 403 95 570 0.0 565
MsG0780040105.01.T01 AT3G02060 83.099 71 12 0 341 411 587 657 1.43e-31 127
MsG0780040105.01.T01 AT3G02060 63.125 480 96 8 1 403 95 570 0.0 565
MsG0780040105.01.T01 AT3G02060 83.099 71 12 0 341 411 587 657 1.43e-31 127
MsG0780040105.01.T01 AT3G02060 63.125 480 96 8 1 403 94 569 0.0 565
MsG0780040105.01.T01 AT3G02060 83.099 71 12 0 341 411 586 656 1.50e-31 127
MsG0780040105.01.T01 AT2G01440 31.760 233 125 4 126 325 508 739 1.58e-23 103

Find 90 sgRNAs with CRISPR-Local

Find 377 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGGACTGCTAAGCAGGTTTC+AGG 0.221067 7:+73099790 MsG0780040105.01.T01:CDS
GTCTTGATAGGAACTCTTTC+TGG 0.236870 7:-73100589 None:intergenic
GTTGGAACTCACTCGCTCTT+AGG 0.292795 7:+73100031 MsG0780040105.01.T01:CDS
CGTGTTGTTTATAACAATCT+TGG 0.320610 7:+73100058 MsG0780040105.01.T01:CDS
AGCAGTCCAACTTTAATATC+AGG 0.332850 7:-73099776 None:intergenic
GACATGGGTATAAGAGGTTT+TGG 0.350439 7:+73103835 MsG0780040105.01.T01:CDS
GTTGGTATTGGGAGATTGTT+GGG 0.359759 7:+73098620 MsG0780040105.01.T01:CDS
ATTTGTGGAGATGTTGGTTT+TGG 0.369665 7:+73099623 MsG0780040105.01.T01:CDS
TGCATAAGAAAGTTGGTATT+GGG 0.372931 7:+73098609 MsG0780040105.01.T01:intron
GTATGCTTCCTTCTCTGATC+TGG 0.376884 7:-73099972 None:intergenic
GAAGATGGTCGTTGACTTGA+TGG 0.378575 7:+73099295 MsG0780040105.01.T01:CDS
AGTTGGTATTGGGAGATTGT+TGG 0.404627 7:+73098619 MsG0780040105.01.T01:CDS
ATCAGAGAAGGAAGCATACT+TGG 0.409182 7:+73099976 MsG0780040105.01.T01:CDS
GGTGACTTAGATATTATTGT+TGG 0.409275 7:+73100013 MsG0780040105.01.T01:CDS
AAATAAAGAGTCCGTGGTAT+AGG 0.411133 7:-73100277 None:intergenic
GTATATCCTGATATTAAAGT+TGG 0.415868 7:+73099770 MsG0780040105.01.T01:CDS
CTTGAAGAATGTCGTGAACT+TGG 0.424383 7:+73103787 MsG0780040105.01.T01:CDS
GATGAAAGCTGAGTCTTGAT+AGG 0.428249 7:-73100601 None:intergenic
GCTTGTGGTTGATGAGGAAC+AGG 0.428905 7:+73100084 MsG0780040105.01.T01:CDS
TTAAAGTTGGACTGCTAAGC+AGG 0.439115 7:+73099783 MsG0780040105.01.T01:CDS
GTGCATAAGAAAGTTGGTAT+TGG 0.441259 7:+73098608 MsG0780040105.01.T01:intron
GCAACGGCTATTTCCACATC+GGG 0.451391 7:-73100921 None:intergenic
GAGAGAGACATGGGTATAAG+AGG 0.455892 7:+73103829 MsG0780040105.01.T01:CDS
AGGTTAATTTGTGGAGATGT+TGG 0.456168 7:+73099617 MsG0780040105.01.T01:CDS
AACGCTACCTGTTTCTGATC+AGG 0.462049 7:-73099413 None:intergenic
TCAGCCACGACAGGACTCAT+AGG 0.462882 7:-73099359 None:intergenic
TGATGTTGAGAAGGATTTGA+CGG 0.469348 7:+73099574 MsG0780040105.01.T01:CDS
ACTCTTTATTTAGCATTGAC+AGG 0.472398 7:+73100289 MsG0780040105.01.T01:CDS
CCATGTCTCTCTCAGCTAGT+TGG 0.477338 7:-73103819 None:intergenic
CCAATGGACAGGTTAATTTG+TGG 0.484034 7:+73099608 MsG0780040105.01.T01:CDS
ATAGGAACTCTTTCTGGAGG+TGG 0.484862 7:-73100583 None:intergenic
TGCATAGGCTTAAACAAAGA+AGG 0.493208 7:+73099327 MsG0780040105.01.T01:CDS
TAAGTATATACAAATGGTTA+AGG 0.499549 7:+73098478 MsG0780040105.01.T01:CDS
AGCTGATAAGTATATACAAA+TGG 0.509149 7:+73098472 MsG0780040105.01.T01:CDS
TCAGAAATCAAAGTTTACCT+TGG 0.512220 7:-73103941 None:intergenic
GTGGAAATAGCCGTTGCCCA+TGG 0.514540 7:+73100927 MsG0780040105.01.T01:CDS
GGGAGAAAAGAAAGACTAAA+GGG 0.516981 7:+73099258 MsG0780040105.01.T01:CDS
ACCTACGCCTGATCAGAAAC+AGG 0.520889 7:+73099406 MsG0780040105.01.T01:CDS
TATGTTGTGCATAAGAAAGT+TGG 0.521089 7:+73098602 MsG0780040105.01.T01:intron
TGGAAATAGCCGTTGCCCAT+GGG 0.523468 7:+73100928 MsG0780040105.01.T01:CDS
TACAGGACTTGAAGAAGCAA+TGG 0.526277 7:+73100878 MsG0780040105.01.T01:intron
CCACAAATTAACCTGTCCAT+TGG 0.527247 7:-73099608 None:intergenic
TGGGAGAAAAGAAAGACTAA+AGG 0.531931 7:+73099257 MsG0780040105.01.T01:CDS
TAACAATCTTGGCCTGCTTG+TGG 0.532270 7:+73100069 MsG0780040105.01.T01:CDS
GTCAACGACCATCTTCTGTA+TGG 0.535749 7:-73099288 None:intergenic
ACGACAGGACTCATAGGATA+AGG 0.537600 7:-73099353 None:intergenic
GAAGGTTGCCATACAGAAGA+TGG 0.537821 7:+73099280 MsG0780040105.01.T01:CDS
AGCAATGGAATTTCTTGAAG+AGG 0.539914 7:+73100893 MsG0780040105.01.T01:CDS
GCTGCGAATTCAGCCACGAC+AGG 0.547109 7:-73099368 None:intergenic
TGGCCTGCTTGTGGTTGATG+AGG 0.547323 7:+73100078 MsG0780040105.01.T01:CDS
AGCTGCGACAACACAGTGGA+TGG 0.553912 7:-73099669 None:intergenic
TGACAGGATTCCGTGATGCT+AGG 0.560223 7:+73100305 MsG0780040105.01.T01:CDS
AGCGAGAAACTCCAATGGAC+AGG 0.564664 7:+73099597 MsG0780040105.01.T01:CDS
AAGGAGTAAATACCTTCCCA+TGG 0.565892 7:-73100944 None:intergenic
ACCTGTTTCTGATCAGGCGT+AGG 0.566177 7:-73099407 None:intergenic
TACTTGGAAATGATTAAGAA+TGG 0.566833 7:+73099992 MsG0780040105.01.T01:CDS
TATTGAGTATGCTGATGGAA+TGG 0.571662 7:+73098693 MsG0780040105.01.T01:CDS
GAGCAACAAACAGGAGATGT+TGG 0.572784 7:+73103871 MsG0780040105.01.T01:CDS
ACAGGAGATGTTGGAAACGT+TGG 0.574740 7:+73103880 MsG0780040105.01.T01:CDS
GAAGCTTAAGGGTGATAGAG+AGG 0.576871 7:+73098523 MsG0780040105.01.T01:CDS
GCTCTTTGAGAGTTTATCCA+AGG 0.577409 7:+73103924 MsG0780040105.01.T01:CDS
GAAAAGAAAGACTAAAGGGA+AGG 0.579948 7:+73099262 MsG0780040105.01.T01:CDS
CCAACTAGCTGAGAGAGACA+TGG 0.588006 7:+73103819 MsG0780040105.01.T01:CDS
AAATACCTTCCCATGGGCAA+CGG 0.589119 7:-73100937 None:intergenic
TGATGGAGCTCTATCTGCAT+AGG 0.591527 7:+73099312 MsG0780040105.01.T01:CDS
TGAAGAGGCATTCCCCGATG+TGG 0.596586 7:+73100908 MsG0780040105.01.T01:CDS
GGTTAAGGAACAACAGCAGA+GGG 0.598097 7:+73098493 MsG0780040105.01.T01:CDS
GTTCCTCATCAACCACAAGC+AGG 0.599047 7:-73100081 None:intergenic
AGTTGAATGATACTAGTGCA+TGG 0.600558 7:+73099237 MsG0780040105.01.T01:CDS
GTTGAATGATACTAGTGCAT+GGG 0.602004 7:+73099238 MsG0780040105.01.T01:CDS
GAATGTCGTGAACTTGGTCA+AGG 0.615926 7:+73103793 MsG0780040105.01.T01:CDS
AATAGCCGTTGCCCATGGGA+AGG 0.616476 7:+73100932 MsG0780040105.01.T01:CDS
CTTGCAGACCAGATCAGAGA+AGG 0.616637 7:+73099964 MsG0780040105.01.T01:intron
GGCAACGGCTATTTCCACAT+CGG 0.621182 7:-73100922 None:intergenic
CAAGATTGTTATAAACAACA+CGG 0.623612 7:-73100057 None:intergenic
TTTGTGTCAAACAGAAGGAG+AGG 0.625490 7:+73100206 MsG0780040105.01.T01:intron
TTGATAGGAACTCTTTCTGG+AGG 0.630837 7:-73100586 None:intergenic
AAGCTTAAGGGTGATAGAGA+GGG 0.631251 7:+73098524 MsG0780040105.01.T01:CDS
AGGAGTAAATACCTTCCCAT+GGG 0.633263 7:-73100943 None:intergenic
CAACTAGCTGAGAGAGACAT+GGG 0.633289 7:+73103820 MsG0780040105.01.T01:CDS
TTATCCTATGAGTCCTGTCG+TGG 0.635220 7:+73099355 MsG0780040105.01.T01:CDS
AATGCTAAATAAAGAGTCCG+TGG 0.648234 7:-73100283 None:intergenic
TTAAGGAACAACAGCAGAGG+GGG 0.649836 7:+73098495 MsG0780040105.01.T01:CDS
GTTAAGGAACAACAGCAGAG+GGG 0.653883 7:+73098494 MsG0780040105.01.T01:CDS
TAGGACTGTTATGGACTCTG+AGG 0.657557 7:+73098448 None:intergenic
ACAGGACTCATAGGATAAGG+AGG 0.678343 7:-73099350 None:intergenic
GACGGAGCGAGAAACTCCAA+TGG 0.681528 7:+73099592 MsG0780040105.01.T01:CDS
TGGTTAAGGAACAACAGCAG+AGG 0.694408 7:+73098492 MsG0780040105.01.T01:CDS
TATCTGCTACGCCTATACCA+CGG 0.698456 7:+73100266 MsG0780040105.01.T01:CDS
CAACGGCTATTTCCACATCG+GGG 0.761769 7:-73100920 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAAACTGAAATATAAATTA+AGG - Chr7:73100555-73100574 None:intergenic 10.0%
!! TTCAAAATACTTAAATTATT+AGG - Chr7:73103253-73103272 None:intergenic 10.0%
!!! ATCATTAATTATTTTATTAG+GGG + Chr7:73101431-73101450 MsG0780040105.01.T01:intron 10.0%
!!! TGATTTTTTATTTAATACTA+GGG - Chr7:73100385-73100404 None:intergenic 10.0%
!!! TTGATTTTTTATTTAATACT+AGG - Chr7:73100386-73100405 None:intergenic 10.0%
!! ACTATCTATTTATACTTTAT+TGG + Chr7:73102519-73102538 MsG0780040105.01.T01:intron 15.0%
!! ATATTAGTTAATATGCTTAA+TGG - Chr7:73100813-73100832 None:intergenic 15.0%
!! ATTACAAATCAATTAATACA+TGG - Chr7:73100748-73100767 None:intergenic 15.0%
!! CTATCTATTTATACTTTATT+GGG + Chr7:73102520-73102539 MsG0780040105.01.T01:intron 15.0%
!!! AAAGTTTTACTTTTTATAGA+TGG - Chr7:73103123-73103142 None:intergenic 15.0%
!!! AATTTTTCTTTTTTCAATAC+TGG + Chr7:73103451-73103470 MsG0780040105.01.T01:intron 15.0%
!!! ATAATATTTCTTTTGTATGT+AGG + Chr7:73101265-73101284 MsG0780040105.01.T01:intron 15.0%
!!! GATTAATTTATGTTTTTGTA+TGG + Chr7:73099470-73099489 MsG0780040105.01.T01:intron 15.0%
!!! GATTTTTTATTTAATACTAG+GGG - Chr7:73100384-73100403 None:intergenic 15.0%
!! AAAAAAGAAGACTAATTCAA+GGG - Chr7:73098785-73098804 None:intergenic 20.0%
!! AAAGTTTAACAAATGCATAT+AGG - Chr7:73103365-73103384 None:intergenic 20.0%
!! ACACCTATTTATTATTCTTA+GGG - Chr7:73102931-73102950 None:intergenic 20.0%
!! ATACTTAAATTATTAGGTGA+AGG - Chr7:73103247-73103266 None:intergenic 20.0%
!! CATCAAAATAACTATGAAAT+TGG - Chr7:73101077-73101096 None:intergenic 20.0%
!! GTTATTCTACTTAGATTAAT+AGG - Chr7:73102320-73102339 None:intergenic 20.0%
!! TAAGTATATACAAATGGTTA+AGG + Chr7:73098478-73098497 MsG0780040105.01.T01:CDS 20.0%
!! TATTTATACTTTATTGGGAT+TGG + Chr7:73102525-73102544 MsG0780040105.01.T01:intron 20.0%
!! TGACAAAAATAAAGAGTAAA+TGG + Chr7:73101308-73101327 MsG0780040105.01.T01:intron 20.0%
!! TTTATCATAAAAGTTCTTCT+GGG + Chr7:73102607-73102626 MsG0780040105.01.T01:intron 20.0%
!! TTTGGCAACATAATTAATTA+TGG + Chr7:73099849-73099868 MsG0780040105.01.T01:intron 20.0%
!!! TATTGTTTCTCTTATAACTT+TGG + Chr7:73102152-73102171 MsG0780040105.01.T01:intron 20.0%
!!! TCACATTATACTTTTTAAGT+TGG - Chr7:73102905-73102924 None:intergenic 20.0%
!!! TGTAAATTTGACTTTATTTC+TGG + Chr7:73101651-73101670 MsG0780040105.01.T01:intron 20.0%
!!! TTAACAATTGTTTTTCTTAC+AGG + Chr7:73100861-73100880 MsG0780040105.01.T01:intron 20.0%
!!! TTAATTGTTTTGTGGATTTT+GGG + Chr7:73099166-73099185 MsG0780040105.01.T01:intron 20.0%
!!! TTTTATCATAAAAGTTCTTC+TGG + Chr7:73102606-73102625 MsG0780040105.01.T01:intron 20.0%
! AAAAAGTAAAACTTTGCACA+AGG + Chr7:73103128-73103147 MsG0780040105.01.T01:intron 25.0%
! AAAGAAGTAAATAGCAAGTT+TGG - Chr7:73099072-73099091 None:intergenic 25.0%
! AAAGATATAGTCAATTAGTC+TGG - Chr7:73102017-73102036 None:intergenic 25.0%
! ACATACACACTTGTAATATA+AGG - Chr7:73102743-73102762 None:intergenic 25.0%
! ACTATATCTTTGTTCGATAT+AGG + Chr7:73102026-73102045 MsG0780040105.01.T01:intron 25.0%
! AGCTGATAAGTATATACAAA+TGG + Chr7:73098472-73098491 MsG0780040105.01.T01:CDS 25.0%
! AGTACAAATATAGTTGAAAG+TGG + Chr7:73101745-73101764 MsG0780040105.01.T01:intron 25.0%
! CAAAAAAGAAGACTAATTCA+AGG - Chr7:73098786-73098805 None:intergenic 25.0%
! CAAGATTGTTATAAACAACA+CGG - Chr7:73100060-73100079 None:intergenic 25.0%
! GAAATAATACGTTAGTAGTA+TGG - Chr7:73103662-73103681 None:intergenic 25.0%
! GACACCTATTTATTATTCTT+AGG - Chr7:73102932-73102951 None:intergenic 25.0%
! GTACAAATATAGTTGAAAGT+GGG + Chr7:73101746-73101765 MsG0780040105.01.T01:intron 25.0%
! GTATATCCTGATATTAAAGT+TGG + Chr7:73099770-73099789 MsG0780040105.01.T01:CDS 25.0%
! GTTAATAAGGAAAAAAAACC+TGG - Chr7:73101838-73101857 None:intergenic 25.0%
! TAAGAGAAACAATATCAAGT+TGG - Chr7:73102146-73102165 None:intergenic 25.0%
! TACATCAACTATCACTAATT+TGG - Chr7:73102851-73102870 None:intergenic 25.0%
! TACTTGGAAATGATTAAGAA+TGG + Chr7:73099992-73100011 MsG0780040105.01.T01:CDS 25.0%
! TATTGTAAATTCTGTGTGTT+TGG + Chr7:73099435-73099454 MsG0780040105.01.T01:intron 25.0%
! TCAATAAAAACATACTCAGT+AGG - Chr7:73098679-73098698 None:intergenic 25.0%
! TTAAGAAATACTTCATGCTT+CGG - Chr7:73103598-73103617 None:intergenic 25.0%
! TTACTAACAAAGAGATACTT+GGG + Chr7:73098984-73099003 MsG0780040105.01.T01:intron 25.0%
! TTATCATAAAAGTTCTTCTG+GGG + Chr7:73102608-73102627 MsG0780040105.01.T01:intron 25.0%
! TTGTAATTATCATGCATTCA+AGG - Chr7:73098858-73098877 None:intergenic 25.0%
!! AAATTTTCCTTCGTAATTTG+TGG - Chr7:73100342-73100361 None:intergenic 25.0%
!! ATGCATTTGTTAAACTTTCT+CGG + Chr7:73103367-73103386 MsG0780040105.01.T01:intron 25.0%
!! ATGTATACACTTTTGATAGA+AGG - Chr7:73101593-73101612 None:intergenic 25.0%
!! CAACTATATTTGTACTGATA+AGG - Chr7:73101741-73101760 None:intergenic 25.0%
!! TAATAAATAGGTGTCATATG+TGG + Chr7:73102937-73102956 MsG0780040105.01.T01:intron 25.0%
!! TCTTTCTGAGAAATATTGTT+TGG + Chr7:73102771-73102790 MsG0780040105.01.T01:intron 25.0%
!! TTATGTTTGTTGAACTTTAG+AGG + Chr7:73099091-73099110 MsG0780040105.01.T01:intron 25.0%
!! TTCTTTTCATTGAAATACTG+AGG + Chr7:73103696-73103715 MsG0780040105.01.T01:intron 25.0%
!! TTTTTCCTTATTAACTCTGA+TGG + Chr7:73101843-73101862 MsG0780040105.01.T01:intron 25.0%
!!! ATACAGTTTTTTCAATAACG+AGG + Chr7:73102815-73102834 MsG0780040105.01.T01:intron 25.0%
!!! ATTTTAGAAGCTTGTTTAAC+AGG - Chr7:73098727-73098746 None:intergenic 25.0%
!!! CTAACGAAAATGTTAGTTTT+AGG - Chr7:73103739-73103758 None:intergenic 25.0%
!!! CTTTTTAGTATAAAAGCTTC+TGG - Chr7:73101021-73101040 None:intergenic 25.0%
!!! GGTTATCCTATTTTTGTTAT+TGG - Chr7:73102421-73102440 None:intergenic 25.0%
!!! GTTAATTGTTTTGTGGATTT+TGG + Chr7:73099165-73099184 MsG0780040105.01.T01:intron 25.0%
!!! TAATTGTTTTGTGGATTTTG+GGG + Chr7:73099167-73099186 MsG0780040105.01.T01:intron 25.0%
!!! TGACTTTGTTAATTGTTTTG+TGG + Chr7:73099158-73099177 MsG0780040105.01.T01:intron 25.0%
!!! TTTTATTTAATACTAGGGGA+AGG - Chr7:73100380-73100399 None:intergenic 25.0%
!!! TTTTTAAGTTGGAAAACACA+CGG - Chr7:73102894-73102913 None:intergenic 25.0%
AAAACAATTAGAGGATACCA+TGG + Chr7:73101687-73101706 MsG0780040105.01.T01:intron 30.0%
AAAGAGTAAATGGACAAGTT+AGG + Chr7:73101318-73101337 MsG0780040105.01.T01:intron 30.0%
AAATTCCAACACATACATCA+TGG - Chr7:73101946-73101965 None:intergenic 30.0%
AACCTAAAAGCTTAACTTCT+TGG + Chr7:73103025-73103044 MsG0780040105.01.T01:intron 30.0%
AACTCTGATGGTTTAGATAT+TGG + Chr7:73101855-73101874 MsG0780040105.01.T01:intron 30.0%
AACTTAGTATGTATATGACC+AGG - Chr7:73101502-73101521 None:intergenic 30.0%
AAGGTGATGCAAATGATATA+TGG + Chr7:73102641-73102660 MsG0780040105.01.T01:intron 30.0%
AATGATTTATTGCATTGCAG+AGG + Chr7:73100183-73100202 MsG0780040105.01.T01:intron 30.0%
ACATAAAAACTTGACCACTA+CGG - Chr7:73100672-73100691 None:intergenic 30.0%
ACCTAAAAGCTTAACTTCTT+GGG + Chr7:73103026-73103045 MsG0780040105.01.T01:intron 30.0%
ACTTAGTATGTATATGACCA+GGG - Chr7:73101501-73101520 None:intergenic 30.0%
AGTATCTTGAGCTAATTGTT+GGG - Chr7:73101985-73102004 None:intergenic 30.0%
ATATTACAAGTGTGTATGTG+TGG + Chr7:73102744-73102763 MsG0780040105.01.T01:intron 30.0%
ATGATGTATGTGTTGGAATT+TGG + Chr7:73101945-73101964 MsG0780040105.01.T01:intron 30.0%
ATTCAGGATGTTCAACAATT+CGG + Chr7:73101797-73101816 MsG0780040105.01.T01:intron 30.0%
CTAAACCATCAGAGTTAATA+AGG - Chr7:73101851-73101870 None:intergenic 30.0%
GAGCCCTAAGAATAATAAAT+AGG + Chr7:73102925-73102944 MsG0780040105.01.T01:intron 30.0%
GCAATACTCAAAACAATTAG+AGG + Chr7:73101678-73101697 MsG0780040105.01.T01:intron 30.0%
GGAAATCCTTACTATTCTTT+GGG + Chr7:73102708-73102727 MsG0780040105.01.T01:intron 30.0%
GGTGACTTAGATATTATTGT+TGG + Chr7:73100013-73100032 MsG0780040105.01.T01:CDS 30.0%
GTTACTAACAAAGAGATACT+TGG + Chr7:73098983-73099002 MsG0780040105.01.T01:intron 30.0%
GTTGAAGATATGTGATTGTT+TGG + Chr7:73101542-73101561 MsG0780040105.01.T01:intron 30.0%
TAAATCATTGGATTGCTTAG+TGG - Chr7:73100172-73100191 None:intergenic 30.0%
TACTAACAAAGAGATACTTG+GGG + Chr7:73098985-73099004 MsG0780040105.01.T01:intron 30.0%
TATCATAAAAGTTCTTCTGG+GGG + Chr7:73102609-73102628 MsG0780040105.01.T01:intron 30.0%
TATGTTGTGCATAAGAAAGT+TGG + Chr7:73098602-73098621 MsG0780040105.01.T01:intron 30.0%
TCAGAAATCAAAGTTTACCT+TGG - Chr7:73103944-73103963 None:intergenic 30.0%
TCTGCAATGCAATAAATCAT+TGG - Chr7:73100184-73100203 None:intergenic 30.0%
TGAAAAAACTGTATTTCGCA+AGG - Chr7:73102809-73102828 None:intergenic 30.0%
TGATGTATGTGTTGGAATTT+GGG + Chr7:73101946-73101965 MsG0780040105.01.T01:intron 30.0%
TGCCAAAACTATGACTAAAA+CGG - Chr7:73099836-73099855 None:intergenic 30.0%
TGGAAATCCTTACTATTCTT+TGG + Chr7:73102707-73102726 MsG0780040105.01.T01:intron 30.0%
TTAGTGATTTCCTATAGGAA+AGG + Chr7:73103755-73103774 MsG0780040105.01.T01:intron 30.0%
TTCCAATAAAATTGTAGGCT+CGG - Chr7:73101475-73101494 None:intergenic 30.0%
TTTCGTTAGTGATTTCCTAT+AGG + Chr7:73103750-73103769 MsG0780040105.01.T01:intron 30.0%
! AAACTTTCTCGGATTTTTGT+TGG + Chr7:73103378-73103397 MsG0780040105.01.T01:intron 30.0%
! ACTTTAGAGGATGATGAATT+AGG + Chr7:73099104-73099123 MsG0780040105.01.T01:intron 30.0%
! AGCCTACAATTTTATTGGAA+CGG + Chr7:73101475-73101494 MsG0780040105.01.T01:intron 30.0%
! ATTTTTGTTGGAACAAAGGA+AGG + Chr7:73103390-73103409 MsG0780040105.01.T01:intron 30.0%
! CAATTTTGTGAGGTTGAATT+AGG - Chr7:73102468-73102487 None:intergenic 30.0%
! CTCGGCTCTAATATTAAAAA+TGG - Chr7:73101457-73101476 None:intergenic 30.0%
! GTTTTTATTGAGTATGCTGA+TGG + Chr7:73098688-73098707 MsG0780040105.01.T01:CDS 30.0%
! TCTCTTATAACTTTGGCTTA+GGG + Chr7:73102159-73102178 MsG0780040105.01.T01:intron 30.0%
! TGTTTTGCTAGAACTATTGT+CGG - Chr7:73099719-73099738 None:intergenic 30.0%
! TTCTCTTATAACTTTGGCTT+AGG + Chr7:73102158-73102177 MsG0780040105.01.T01:intron 30.0%
!! AATCAGTTCTAAGCAATGTA+TGG - Chr7:73101901-73101920 None:intergenic 30.0%
!! ACTATACAAACCAGTTTTGA+GGG - Chr7:73102196-73102215 None:intergenic 30.0%
!! ACTCTTTATTTAGCATTGAC+AGG + Chr7:73100289-73100308 MsG0780040105.01.T01:CDS 30.0%
!! AGAGGTTTTGGTACTATTTT+CGG + Chr7:73103847-73103866 MsG0780040105.01.T01:CDS 30.0%
!! AGATGGTAGCTTTAGTTATA+AGG + Chr7:73098550-73098569 MsG0780040105.01.T01:intron 30.0%
!! ATCAAAATATTCGAGTTGCA+TGG + Chr7:73100440-73100459 MsG0780040105.01.T01:intron 30.0%
!! CGTGTTGTTTATAACAATCT+TGG + Chr7:73100058-73100077 MsG0780040105.01.T01:CDS 30.0%
!! TGCATAAGAAAGTTGGTATT+GGG + Chr7:73098609-73098628 MsG0780040105.01.T01:intron 30.0%
!! TGGTAATTTTGATACATTCG+AGG + Chr7:73099014-73099033 MsG0780040105.01.T01:intron 30.0%
!!! CTATTTTTGTTATTGGACCA+GGG - Chr7:73102414-73102433 None:intergenic 30.0%
!!! GAAGTTAAGCTTTTAGGTTA+AGG - Chr7:73103024-73103043 None:intergenic 30.0%
!!! TGCTTCTTTTAAAACTTCTG+TGG + Chr7:73100231-73100250 MsG0780040105.01.T01:CDS 30.0%
AAACTTTGCACAAGGTAGAA+CGG + Chr7:73103136-73103155 MsG0780040105.01.T01:intron 35.0%
AAATAAAGAGTCCGTGGTAT+AGG - Chr7:73100280-73100299 None:intergenic 35.0%
AAATATGAAAGCCAAACTGC+TGG - Chr7:73102118-73102137 None:intergenic 35.0%
AACAAGCCCAAAGAATAGTA+AGG - Chr7:73102717-73102736 None:intergenic 35.0%
AATACGAGCTACATAGTTCT+AGG + Chr7:73099879-73099898 MsG0780040105.01.T01:intron 35.0%
AATGCTAAATAAAGAGTCCG+TGG - Chr7:73100286-73100305 None:intergenic 35.0%
AGCAATGGAATTTCTTGAAG+AGG + Chr7:73100893-73100912 MsG0780040105.01.T01:CDS 35.0%
AGCAGTCCAACTTTAATATC+AGG - Chr7:73099779-73099798 None:intergenic 35.0%
AGGTACTACTTATAAGGCTT+GGG - Chr7:73102227-73102246 None:intergenic 35.0%
AGTTGAATGATACTAGTGCA+TGG + Chr7:73099237-73099256 MsG0780040105.01.T01:CDS 35.0%
ATGTACCATGATGTATGTGT+TGG + Chr7:73101938-73101957 MsG0780040105.01.T01:intron 35.0%
CAAATGAAACAAAAAGCCCA+GGG + Chr7:73099205-73099224 MsG0780040105.01.T01:intron 35.0%
CACAGAAACAGACTCATAAA+AGG - Chr7:73100966-73100985 None:intergenic 35.0%
CATACCCCTACAAATAATTG+AGG - Chr7:73101223-73101242 None:intergenic 35.0%
CCTGGTCCAATAACAAAAAT+AGG + Chr7:73102412-73102431 MsG0780040105.01.T01:intron 35.0%
CTTCATGCTTCGGAAATAAA+AGG - Chr7:73103588-73103607 None:intergenic 35.0%
GAAAAGAAAGACTAAAGGGA+AGG + Chr7:73099262-73099281 MsG0780040105.01.T01:CDS 35.0%
GACAATGCGTTACACATTTA+TGG + Chr7:73099045-73099064 MsG0780040105.01.T01:intron 35.0%
GACATACTATGAGATTGAAG+AGG + Chr7:73103193-73103212 MsG0780040105.01.T01:intron 35.0%
GAGTATAATTGTTGGGATGT+AGG + Chr7:73101242-73101261 MsG0780040105.01.T01:intron 35.0%
GAGTATCTTGAGCTAATTGT+TGG - Chr7:73101986-73102005 None:intergenic 35.0%
GATAACCTCAAATCTTATCC+GGG + Chr7:73102434-73102453 MsG0780040105.01.T01:intron 35.0%
GATGAATCACCTTTAATACG+TGG - Chr7:73100699-73100718 None:intergenic 35.0%
GCCAAAACTATGACTAAAAC+GGG - Chr7:73099835-73099854 None:intergenic 35.0%
GGATAACCTCAAATCTTATC+CGG + Chr7:73102433-73102452 MsG0780040105.01.T01:intron 35.0%
GGGAGAAAAGAAAGACTAAA+GGG + Chr7:73099258-73099277 MsG0780040105.01.T01:CDS 35.0%
GGGGTATGAGTATAATTGTT+GGG + Chr7:73101235-73101254 MsG0780040105.01.T01:intron 35.0%
GTAGCACTATAATCACAAGA+AGG - Chr7:73100140-73100159 None:intergenic 35.0%
GTTGAATGATACTAGTGCAT+GGG + Chr7:73099238-73099257 MsG0780040105.01.T01:CDS 35.0%
TAGGTACTACTTATAAGGCT+TGG - Chr7:73102228-73102247 None:intergenic 35.0%
TATGTTCTGCCACGTATTAA+AGG + Chr7:73100687-73100706 MsG0780040105.01.T01:intron 35.0%
TATTGAGTATGCTGATGGAA+TGG + Chr7:73098693-73098712 MsG0780040105.01.T01:CDS 35.0%
TCAAAAGATCCAGGATTTGT+GGG - Chr7:73101119-73101138 None:intergenic 35.0%
TCAGCTTTCATCATTCAGTA+AGG + Chr7:73100612-73100631 MsG0780040105.01.T01:intron 35.0%
TGATGTTGAGAAGGATTTGA+CGG + Chr7:73099574-73099593 MsG0780040105.01.T01:CDS 35.0%
TGCATAGGCTTAAACAAAGA+AGG + Chr7:73099327-73099346 MsG0780040105.01.T01:CDS 35.0%
TGGGAGAAAAGAAAGACTAA+AGG + Chr7:73099257-73099276 MsG0780040105.01.T01:CDS 35.0%
TGTGTATGTCAATGATGACA+AGG - Chr7:73102968-73102987 None:intergenic 35.0%
TTACTATTCTTTGGGCTTGT+TGG + Chr7:73102716-73102735 MsG0780040105.01.T01:intron 35.0%
TTATAGATGGTAGAGTAGCA+AGG - Chr7:73103110-73103129 None:intergenic 35.0%
TTGTAGCTCTTTGCAATGAA+TGG + Chr7:73103301-73103320 MsG0780040105.01.T01:intron 35.0%
TTGTTGAACATCCTGAATGA+TGG - Chr7:73101795-73101814 None:intergenic 35.0%
TTTCAAATGCATGTTCTTGC+AGG + Chr7:73099544-73099563 MsG0780040105.01.T01:intron 35.0%
! AAGCCTTATAAGTAGTACCT+AGG + Chr7:73102227-73102246 MsG0780040105.01.T01:intron 35.0%
! ACAAATCCTGGATCTTTTGA+GGG + Chr7:73101119-73101138 MsG0780040105.01.T01:intron 35.0%
! AGGGGTATGAGTATAATTGT+TGG + Chr7:73101234-73101253 MsG0780040105.01.T01:intron 35.0%
! ATGCTTCAGATGTCTAGTTT+GGG - Chr7:73102364-73102383 None:intergenic 35.0%
! CACTATACAAACCAGTTTTG+AGG - Chr7:73102197-73102216 None:intergenic 35.0%
! CCTTACAAGTCAATTTTGTG+AGG - Chr7:73102478-73102497 None:intergenic 35.0%
! GGCTTTTATTGATGTTGAGA+AGG + Chr7:73099565-73099584 MsG0780040105.01.T01:intron 35.0%
! TCCCAAGAAGTTAAGCTTTT+AGG - Chr7:73103030-73103049 None:intergenic 35.0%
! TCGGATTTTTGTTGGAACAA+AGG + Chr7:73103386-73103405 MsG0780040105.01.T01:intron 35.0%
! TTTCCTTCGTAATTTGTGGA+AGG - Chr7:73100338-73100357 None:intergenic 35.0%
!! AAATATTCGAGTTGCATGGT+TGG + Chr7:73100444-73100463 MsG0780040105.01.T01:intron 35.0%
!! AGGTTAATTTGTGGAGATGT+TGG + Chr7:73099617-73099636 MsG0780040105.01.T01:CDS 35.0%
!! CAAAATTGACTTGTAAGGTG+AGG + Chr7:73102480-73102499 MsG0780040105.01.T01:intron 35.0%
!! CCTCACAAAATTGACTTGTA+AGG + Chr7:73102475-73102494 MsG0780040105.01.T01:intron 35.0%
!! CTCTGTTACAGTATTGACTT+TGG + Chr7:73100834-73100853 MsG0780040105.01.T01:intron 35.0%
!! GTGCATAAGAAAGTTGGTAT+TGG + Chr7:73098608-73098627 MsG0780040105.01.T01:intron 35.0%
!! TCCCGTTTTAGTCATAGTTT+TGG + Chr7:73099831-73099850 MsG0780040105.01.T01:intron 35.0%
!!! ATTTGTGGAGATGTTGGTTT+TGG + Chr7:73099623-73099642 MsG0780040105.01.T01:CDS 35.0%
!!! CCTATTTTTGTTATTGGACC+AGG - Chr7:73102415-73102434 None:intergenic 35.0%
AAGCTTAAGGGTGATAGAGA+GGG + Chr7:73098524-73098543 MsG0780040105.01.T01:CDS 40.0%
AAGGAGTAAATACCTTCCCA+TGG - Chr7:73100947-73100966 None:intergenic 40.0%
AATGCAAACCACCATCATTC+AGG + Chr7:73101781-73101800 MsG0780040105.01.T01:intron 40.0%
AATTCTGTGTGTTTGGTCGA+AGG + Chr7:73099442-73099461 MsG0780040105.01.T01:intron 40.0%
ACACTTAAATGTGTGAAGCG+CGG + Chr7:73098822-73098841 MsG0780040105.01.T01:intron 40.0%
ACATGTGAGCTTGGACATAT+TGG - Chr7:73099515-73099534 None:intergenic 40.0%
ACCCTTATACACTTCGTTCT+GGG + Chr7:73098576-73098595 MsG0780040105.01.T01:intron 40.0%
AGAGGTTTGTGTCAAACAGA+AGG + Chr7:73100201-73100220 MsG0780040105.01.T01:intron 40.0%
AGGAGTAAATACCTTCCCAT+GGG - Chr7:73100946-73100965 None:intergenic 40.0%
AGGGCCTCAATTATTTGTAG+GGG + Chr7:73101216-73101235 MsG0780040105.01.T01:intron 40.0%
AGTCCTTCCACAAATTACGA+AGG + Chr7:73100332-73100351 MsG0780040105.01.T01:intron 40.0%
ATCAACTAGAGATATCGCCT+AGG - Chr7:73102247-73102266 None:intergenic 40.0%
ATTCTGTGTGTTTGGTCGAA+GGG + Chr7:73099443-73099462 MsG0780040105.01.T01:intron 40.0%
ATTGGATTGCTTAGTGGAGA+GGG - Chr7:73100166-73100185 None:intergenic 40.0%
CAAAAGATCCAGGATTTGTG+GGG - Chr7:73101118-73101137 None:intergenic 40.0%
CATATTTACCCCACAAATCC+TGG + Chr7:73101107-73101126 MsG0780040105.01.T01:intron 40.0%
CATGCTTCAGATGTCTAGTT+TGG - Chr7:73102365-73102384 None:intergenic 40.0%
CCAAATGAAACAAAAAGCCC+AGG + Chr7:73099204-73099223 MsG0780040105.01.T01:intron 40.0%
CCACAAATTAACCTGTCCAT+TGG - Chr7:73099611-73099630 None:intergenic 40.0%
CTCAAAAGATCCAGGATTTG+TGG - Chr7:73101120-73101139 None:intergenic 40.0%
CTTGAAGAATGTCGTGAACT+TGG + Chr7:73103787-73103806 MsG0780040105.01.T01:CDS 40.0%
GAGATATCAACATGTGAGCT+TGG - Chr7:73099524-73099543 None:intergenic 40.0%
GAGGGCCTCAATTATTTGTA+GGG + Chr7:73101215-73101234 MsG0780040105.01.T01:intron 40.0%
GATAGAAGGCAGTCAAATTC+TGG - Chr7:73101579-73101598 None:intergenic 40.0%
GATGAAAGCTGAGTCTTGAT+AGG - Chr7:73100604-73100623 None:intergenic 40.0%
GGATCAAACTTTGAACCACT+TGG - Chr7:73103089-73103108 None:intergenic 40.0%
GGCCGTTCCAATAAAATTGT+AGG - Chr7:73101480-73101499 None:intergenic 40.0%
GTCTTGATAGGAACTCTTTC+TGG - Chr7:73100592-73100611 None:intergenic 40.0%
TAATTGAGGCCCTCAGAAAT+TGG - Chr7:73101209-73101228 None:intergenic 40.0%
TACAGGACTTGAAGAAGCAA+TGG + Chr7:73100878-73100897 MsG0780040105.01.T01:intron 40.0%
TAGTATACCATCCAGCAGTT+TGG + Chr7:73102104-73102123 MsG0780040105.01.T01:intron 40.0%
TCGCCTAGGTACTACTTATA+AGG - Chr7:73102233-73102252 None:intergenic 40.0%
TCTAAGCTTGTCGATCACAA+TGG - Chr7:73100998-73101017 None:intergenic 40.0%
TCTGCTAACTGATCAAGCAT+TGG + Chr7:73103541-73103560 MsG0780040105.01.T01:intron 40.0%
TGAGGGCCTCAATTATTTGT+AGG + Chr7:73101214-73101233 MsG0780040105.01.T01:intron 40.0%
TTAAAGTTGGACTGCTAAGC+AGG + Chr7:73099783-73099802 MsG0780040105.01.T01:CDS 40.0%
TTAACGCGCTTAAAGTTCAG+AGG + Chr7:73103171-73103190 MsG0780040105.01.T01:intron 40.0%
TTGAACATCCTGAATGATGG+TGG - Chr7:73101792-73101811 None:intergenic 40.0%
TTGATAGGAACTCTTTCTGG+AGG - Chr7:73100589-73100608 None:intergenic 40.0%
TTGTAAGGTGAGGATTGCTT+GGG + Chr7:73102490-73102509 MsG0780040105.01.T01:intron 40.0%
TTTCAATACTGGTAGTTGCG+AGG + Chr7:73103462-73103481 MsG0780040105.01.T01:intron 40.0%
TTTGTGTCAAACAGAAGGAG+AGG + Chr7:73100206-73100225 MsG0780040105.01.T01:intron 40.0%
! ACTTTATTGGGATTGGTGCA+TGG + Chr7:73102532-73102551 MsG0780040105.01.T01:intron 40.0%
! AGAGATACTTGGGGATGTTT+TGG + Chr7:73098994-73099013 MsG0780040105.01.T01:intron 40.0%
! AGCCGAGCCTACAATTTTAT+TGG + Chr7:73101470-73101489 MsG0780040105.01.T01:intron 40.0%
! AGGACTTTTACCTAGCATCA+CGG - Chr7:73100318-73100337 None:intergenic 40.0%
! AGTTGGTATTGGGAGATTGT+TGG + Chr7:73098619-73098638 MsG0780040105.01.T01:CDS 40.0%
! ATCAGAGAAGGAAGCATACT+TGG + Chr7:73099976-73099995 MsG0780040105.01.T01:CDS 40.0%
! CAAACTAGACATCTGAAGCA+TGG + Chr7:73102363-73102382 MsG0780040105.01.T01:intron 40.0%
! CACAAATCCTGGATCTTTTG+AGG + Chr7:73101118-73101137 MsG0780040105.01.T01:intron 40.0%
! CCAATGGACAGGTTAATTTG+TGG + Chr7:73099608-73099627 MsG0780040105.01.T01:CDS 40.0%
! GACATGGGTATAAGAGGTTT+TGG + Chr7:73103835-73103854 MsG0780040105.01.T01:CDS 40.0%
! GCTCTTTGAGAGTTTATCCA+AGG + Chr7:73103924-73103943 MsG0780040105.01.T01:CDS 40.0%
! GGATTGGTGCATGGTTAATA+CGG + Chr7:73102541-73102560 MsG0780040105.01.T01:intron 40.0%
! GTTGGTATTGGGAGATTGTT+GGG + Chr7:73098620-73098639 MsG0780040105.01.T01:CDS 40.0%
! TATTAGGTGAAGGCACAAGA+TGG - Chr7:73103237-73103256 None:intergenic 40.0%
! TCTGAAGCATGGACAAATGT+CGG + Chr7:73102374-73102393 MsG0780040105.01.T01:intron 40.0%
!! CCTGGGCTTTTTGTTTCATT+TGG - Chr7:73099207-73099226 None:intergenic 40.0%
!! TTAAGTTGGAAAACACACGG+AGG - Chr7:73102891-73102910 None:intergenic 40.0%
AAACCTGGTACAACTGTGCA+AGG - Chr7:73101823-73101842 None:intergenic 45.0%
AAATACCTTCCCATGGGCAA+CGG - Chr7:73100940-73100959 None:intergenic 45.0%
AAGGCTTAGCTGCTCAAGAA+TGG - Chr7:73103005-73103024 None:intergenic 45.0%
AAGTATGAGCTAGACCGTAG+TGG + Chr7:73100655-73100674 MsG0780040105.01.T01:intron 45.0%
AATACTGGTAGTTGCGAGGA+AGG + Chr7:73103466-73103485 MsG0780040105.01.T01:intron 45.0%
ACAGGACTCATAGGATAAGG+AGG - Chr7:73099353-73099372 None:intergenic 45.0%
ACAGGAGATGTTGGAAACGT+TGG + Chr7:73103880-73103899 MsG0780040105.01.T01:CDS 45.0%
ACCTAGAGCAAACTTCTCCA+TGG - Chr7:73101707-73101726 None:intergenic 45.0%
ACGACAGGACTCATAGGATA+AGG - Chr7:73099356-73099375 None:intergenic 45.0%
AGTATCTCACCTAAGCTCAG+AGG - Chr7:73100518-73100537 None:intergenic 45.0%
ATACTGGTAGTTGCGAGGAA+GGG + Chr7:73103467-73103486 MsG0780040105.01.T01:intron 45.0%
ATGAAAGCCAAACTGCTGGA+TGG - Chr7:73102114-73102133 None:intergenic 45.0%
ATTTCCAACCGTGAACTGCT+TGG - Chr7:73102694-73102713 None:intergenic 45.0%
CAACTAGCTGAGAGAGACAT+GGG + Chr7:73103820-73103839 MsG0780040105.01.T01:CDS 45.0%
CATTGGATTGCTTAGTGGAG+AGG - Chr7:73100167-73100186 None:intergenic 45.0%
CCCCAGAACGAAGTGTATAA+GGG - Chr7:73098580-73098599 None:intergenic 45.0%
CCCTTATACACTTCGTTCTG+GGG + Chr7:73098577-73098596 MsG0780040105.01.T01:intron 45.0%
CGCAGCTAAAAAGCAAGCAA+TGG + Chr7:73099685-73099704 MsG0780040105.01.T01:CDS 45.0%
CTAACTCGAACCCTCAAAAC+TGG + Chr7:73102183-73102202 MsG0780040105.01.T01:intron 45.0%
CTTGTAAGGTGAGGATTGCT+TGG + Chr7:73102489-73102508 MsG0780040105.01.T01:intron 45.0%
GAAGCTTAAGGGTGATAGAG+AGG + Chr7:73098523-73098542 MsG0780040105.01.T01:CDS 45.0%
GAAGGTTGCCATACAGAAGA+TGG + Chr7:73099280-73099299 MsG0780040105.01.T01:CDS 45.0%
GAATGTCGTGAACTTGGTCA+AGG + Chr7:73103793-73103812 MsG0780040105.01.T01:CDS 45.0%
GACCCTTATACACTTCGTTC+TGG + Chr7:73098575-73098594 MsG0780040105.01.T01:intron 45.0%
GAGAGAGACATGGGTATAAG+AGG + Chr7:73103829-73103848 MsG0780040105.01.T01:CDS 45.0%
GAGCAACAAACAGGAGATGT+TGG + Chr7:73103871-73103890 MsG0780040105.01.T01:CDS 45.0%
GGTGATAGAGAGGGTAAAGA+TGG + Chr7:73098533-73098552 MsG0780040105.01.T01:intron 45.0%
GGTTAAGGAACAACAGCAGA+GGG + Chr7:73098493-73098512 MsG0780040105.01.T01:CDS 45.0%
GTATGCTTCCTTCTCTGATC+TGG - Chr7:73099975-73099994 None:intergenic 45.0%
GTCAACGACCATCTTCTGTA+TGG - Chr7:73099291-73099310 None:intergenic 45.0%
GTTAAGGAACAACAGCAGAG+GGG + Chr7:73098494-73098513 MsG0780040105.01.T01:CDS 45.0%
TAACAATCTTGGCCTGCTTG+TGG + Chr7:73100069-73100088 MsG0780040105.01.T01:CDS 45.0%
TATCTGCTACGCCTATACCA+CGG + Chr7:73100266-73100285 MsG0780040105.01.T01:CDS 45.0%
TCATATACAGAGCCGTTCCT+CGG + Chr7:73101152-73101171 MsG0780040105.01.T01:intron 45.0%
TCCATTGTCCAAGCAGTTCA+CGG + Chr7:73102683-73102702 MsG0780040105.01.T01:intron 45.0%
TCCCCAGAACGAAGTGTATA+AGG - Chr7:73098581-73098600 None:intergenic 45.0%
TCTAACCCTGAGCATGAAGA+GGG - Chr7:73102286-73102305 None:intergenic 45.0%
TGATGGAGCTCTATCTGCAT+AGG + Chr7:73099312-73099331 MsG0780040105.01.T01:CDS 45.0%
TGGTGCATGGTTAATACGGA+TGG + Chr7:73102545-73102564 MsG0780040105.01.T01:intron 45.0%
TGGTTAAGGAACAACAGCAG+AGG + Chr7:73098492-73098511 MsG0780040105.01.T01:CDS 45.0%
TTAAGGAACAACAGCAGAGG+GGG + Chr7:73098495-73098514 MsG0780040105.01.T01:CDS 45.0%
TTATCCTATGAGTCCTGTCG+TGG + Chr7:73099355-73099374 MsG0780040105.01.T01:CDS 45.0%
TTCTGTGTGTTTGGTCGAAG+GGG + Chr7:73099444-73099463 MsG0780040105.01.T01:intron 45.0%
TTGGATTGCTTAGTGGAGAG+GGG - Chr7:73100165-73100184 None:intergenic 45.0%
! ACCATGGAGAAGTTTGCTCT+AGG + Chr7:73101703-73101722 MsG0780040105.01.T01:intron 45.0%
! ACGGTCTAGCTCATACTTGA+TGG - Chr7:73100653-73100672 None:intergenic 45.0%
! AGATGTCTAGTTTGGGTGAG+GGG - Chr7:73102357-73102376 None:intergenic 45.0%
! ATAGGAACTCTTTCTGGAGG+TGG - Chr7:73100586-73100605 None:intergenic 45.0%
! ATTCAACTTGCTCAATGCCC+TGG - Chr7:73099225-73099244 None:intergenic 45.0%
! ATTTTCGGCGAGCAACAAAC+AGG + Chr7:73103862-73103881 MsG0780040105.01.T01:CDS 45.0%
! CAATTTTATTGGAACGGCCC+TGG + Chr7:73101481-73101500 MsG0780040105.01.T01:intron 45.0%
! CAGATGTCTAGTTTGGGTGA+GGG - Chr7:73102358-73102377 None:intergenic 45.0%
! TCAGATGTCTAGTTTGGGTG+AGG - Chr7:73102359-73102378 None:intergenic 45.0%
! TTCAACTTGCTCAATGCCCT+GGG - Chr7:73099224-73099243 None:intergenic 45.0%
! TTCTTGGGAGAGTATGTCCT+TGG + Chr7:73103041-73103060 MsG0780040105.01.T01:intron 45.0%
!! AACGCTACCTGTTTCTGATC+AGG - Chr7:73099416-73099435 None:intergenic 45.0%
!! AGGCAGTCAAATTCTGGAGT+TGG - Chr7:73101573-73101592 None:intergenic 45.0%
!! GAAGATGGTCGTTGACTTGA+TGG + Chr7:73099295-73099314 MsG0780040105.01.T01:CDS 45.0%
!! TTTTAGCTGCGACAACACAG+TGG - Chr7:73099676-73099695 None:intergenic 45.0%
!!! CAGTTTTGAGGGTTCGAGTT+AGG - Chr7:73102185-73102204 None:intergenic 45.0%
!!! TATCATTAATTATTTTATTA+GGG + Chr7:73101430-73101449 MsG0780040105.01.T01:intron 5.0%
!!! TTATCATTAATTATTTTATT+AGG + Chr7:73101429-73101448 MsG0780040105.01.T01:intron 5.0%
ACCGTGAACTGCTTGGACAA+TGG - Chr7:73102687-73102706 None:intergenic 50.0%
ACCTACGCCTGATCAGAAAC+AGG + Chr7:73099406-73099425 MsG0780040105.01.T01:CDS 50.0%
AGCGAGAAACTCCAATGGAC+AGG + Chr7:73099597-73099616 MsG0780040105.01.T01:CDS 50.0%
AGGGGGTTGCAGAAGCTTAA+GGG + Chr7:73098512-73098531 MsG0780040105.01.T01:CDS 50.0%
AGTTGGAAAACACACGGAGG+TGG - Chr7:73102888-73102907 None:intergenic 50.0%
CCAACTAGCTGAGAGAGACA+TGG + Chr7:73103819-73103838 MsG0780040105.01.T01:CDS 50.0%
CCATGTCTCTCTCAGCTAGT+TGG - Chr7:73103822-73103841 None:intergenic 50.0%
CGGTGGTATAACAAAGACCC+TGG + Chr7:73102394-73102413 MsG0780040105.01.T01:intron 50.0%
CTAACCCTGAGCATGAAGAG+GGG - Chr7:73102285-73102304 None:intergenic 50.0%
CTCTGATCTGGTCTGCAAGT+AGG - Chr7:73099963-73099982 None:intergenic 50.0%
CTTGCAGACCAGATCAGAGA+AGG + Chr7:73099964-73099983 MsG0780040105.01.T01:intron 50.0%
GAAGCATGGACAAATGTCGG+TGG + Chr7:73102377-73102396 MsG0780040105.01.T01:intron 50.0%
GAGCTGCAAGCCTTTCCTAT+AGG - Chr7:73103768-73103787 None:intergenic 50.0%
GATCGCACTGTTTCAGTCCA+TGG + Chr7:73102058-73102077 MsG0780040105.01.T01:intron 50.0%
GATCTGGTCTGCAAGTAGGT+GGG - Chr7:73099959-73099978 None:intergenic 50.0%
GCACTGTTTCAGTCCATGGA+TGG + Chr7:73102062-73102081 MsG0780040105.01.T01:intron 50.0%
GTCTAACCCTGAGCATGAAG+AGG - Chr7:73102287-73102306 None:intergenic 50.0%
GTCTCTCTCATACCATGCCA+AGG - Chr7:73103061-73103080 None:intergenic 50.0%
GTTCCTCATCAACCACAAGC+AGG - Chr7:73100084-73100103 None:intergenic 50.0%
GTTGGAACTCACTCGCTCTT+AGG + Chr7:73100031-73100050 MsG0780040105.01.T01:CDS 50.0%
TCTCACCTAAGCTCAGAGGT+TGG - Chr7:73100514-73100533 None:intergenic 50.0%
TGACAGGATTCCGTGATGCT+AGG + Chr7:73100305-73100324 MsG0780040105.01.T01:CDS 50.0%
TGAGAGAGACTCTGACCAAG+TGG + Chr7:73103071-73103090 MsG0780040105.01.T01:intron 50.0%
TGAGAGCCCTCAAAAGATCC+AGG - Chr7:73101128-73101147 None:intergenic 50.0%
TGATCTGGTCTGCAAGTAGG+TGG - Chr7:73099960-73099979 None:intergenic 50.0%
TGCAACCAACCTCTGAGCTT+AGG + Chr7:73100506-73100525 MsG0780040105.01.T01:intron 50.0%
TGGAAATAGCCGTTGCCCAT+GGG + Chr7:73100928-73100947 MsG0780040105.01.T01:CDS 50.0%
TGGACTGCTAAGCAGGTTTC+AGG + Chr7:73099790-73099809 MsG0780040105.01.T01:CDS 50.0%
TGGATTGCTTAGTGGAGAGG+GGG - Chr7:73100164-73100183 None:intergenic 50.0%
TGTATCTGCTCAGCCATCCA+TGG - Chr7:73102078-73102097 None:intergenic 50.0%
TTGAGGCCCTCAGAAATTGG+AGG - Chr7:73101206-73101225 None:intergenic 50.0%
TTGTCCAAGCAGTTCACGGT+TGG + Chr7:73102687-73102706 MsG0780040105.01.T01:intron 50.0%
! CAACGGCTATTTCCACATCG+GGG - Chr7:73100923-73100942 None:intergenic 50.0%
! CTTCTGGGGGTGTATGTTGA+AGG + Chr7:73102622-73102641 MsG0780040105.01.T01:intron 50.0%
! GCAACGGCTATTTCCACATC+GGG - Chr7:73100924-73100943 None:intergenic 50.0%
! GGCAACGGCTATTTCCACAT+CGG - Chr7:73100925-73100944 None:intergenic 50.0%
!! ACCTGTTTCTGATCAGGCGT+AGG - Chr7:73099410-73099429 None:intergenic 50.0%
!! GCTTGTGGTTGATGAGGAAC+AGG + Chr7:73100084-73100103 MsG0780040105.01.T01:CDS 50.0%
AATAGCCGTTGCCCATGGGA+AGG + Chr7:73100932-73100951 MsG0780040105.01.T01:CDS 55.0%
AGCACCCCTCTTCATGCTCA+GGG + Chr7:73102278-73102297 MsG0780040105.01.T01:intron 55.0%
AGCCGAGCCTCCAATTTCTG+AGG + Chr7:73101196-73101215 MsG0780040105.01.T01:intron 55.0%
AGCTGCGACAACACAGTGGA+TGG - Chr7:73099672-73099691 None:intergenic 55.0%
GACGGAGCGAGAAACTCCAA+TGG + Chr7:73099592-73099611 MsG0780040105.01.T01:CDS 55.0%
GAGGGGGTTGCAGAAGCTTA+AGG + Chr7:73098511-73098530 MsG0780040105.01.T01:CDS 55.0%
GCCCTCAGAAATTGGAGGCT+CGG - Chr7:73101201-73101220 None:intergenic 55.0%
GCCGAGCCTCCAATTTCTGA+GGG + Chr7:73101197-73101216 MsG0780040105.01.T01:intron 55.0%
GGAAAACACACGGAGGTGGT+AGG - Chr7:73102884-73102903 None:intergenic 55.0%
GGCATGTGCAAGGAGCTCTA+CGG + Chr7:73101173-73101192 MsG0780040105.01.T01:intron 55.0%
GGTAGTTGCGAGGAAGGGTT+GGG + Chr7:73103472-73103491 MsG0780040105.01.T01:intron 55.0%
GTGGAAATAGCCGTTGCCCA+TGG + Chr7:73100927-73100946 MsG0780040105.01.T01:CDS 55.0%
TCAGCCACGACAGGACTCAT+AGG - Chr7:73099362-73099381 None:intergenic 55.0%
TCCTTGCACATGCCGAGGAA+CGG - Chr7:73101167-73101186 None:intergenic 55.0%
TGGTAGTTGCGAGGAAGGGT+TGG + Chr7:73103471-73103490 MsG0780040105.01.T01:intron 55.0%
! GGGAGAGTATGTCCTTGGCA+TGG + Chr7:73103046-73103065 MsG0780040105.01.T01:intron 55.0%
! TGGCCTGCTTGTGGTTGATG+AGG + Chr7:73100078-73100097 MsG0780040105.01.T01:CDS 55.0%
!! TGAAGAGGCATTCCCCGATG+TGG + Chr7:73100908-73100927 MsG0780040105.01.T01:CDS 55.0%
AGAGCTCCTTGCACATGCCG+AGG - Chr7:73101172-73101191 None:intergenic 60.0%
AGTTGCGAGGAAGGGTTGGG+CGG + Chr7:73103475-73103494 MsG0780040105.01.T01:intron 60.0%
CAGCACCCCTCTTCATGCTC+AGG + Chr7:73102277-73102296 MsG0780040105.01.T01:intron 60.0%
CGGCCTTGCACAGTTGTACC+AGG + Chr7:73101817-73101836 MsG0780040105.01.T01:intron 60.0%
GCTGCGAATTCAGCCACGAC+AGG - Chr7:73099371-73099390 None:intergenic 60.0%
AAGGGTTGGGCGGGCAGACA+AGG + Chr7:73103485-73103504 MsG0780040105.01.T01:intron 65.0%
GCCGTTCCTCGGCATGTGCA+AGG + Chr7:73101163-73101182 MsG0780040105.01.T01:intron 65.0%
GTTGCGAGGAAGGGTTGGGC+GGG + Chr7:73103476-73103495 MsG0780040105.01.T01:intron 65.0%
Chromosome Type Strat End Strand Name
Chr7 gene 73098458 73103963 73098458 ID=MsG0780040105.01;Name=MsG0780040105.01
Chr7 mRNA 73098458 73103963 73098458 ID=MsG0780040105.01.T01;Parent=MsG0780040105.01;Name=MsG0780040105.01.T01;_AED=0.45;_eAED=0.45;_QI=0|0.37|0.33|1|1|1|9|0|415
Chr7 exon 73098458 73098545 73098458 ID=MsG0780040105.01.T01:exon:13065;Parent=MsG0780040105.01.T01
Chr7 exon 73098617 73098764 73098617 ID=MsG0780040105.01.T01:exon:13066;Parent=MsG0780040105.01.T01
Chr7 exon 73099226 73099427 73099226 ID=MsG0780040105.01.T01:exon:13067;Parent=MsG0780040105.01.T01
Chr7 exon 73099566 73099811 73099566 ID=MsG0780040105.01.T01:exon:13068;Parent=MsG0780040105.01.T01
Chr7 exon 73099971 73100105 73099971 ID=MsG0780040105.01.T01:exon:13069;Parent=MsG0780040105.01.T01
Chr7 exon 73100220 73100326 73100220 ID=MsG0780040105.01.T01:exon:13070;Parent=MsG0780040105.01.T01
Chr7 exon 73100570 73100628 73100570 ID=MsG0780040105.01.T01:exon:13071;Parent=MsG0780040105.01.T01
Chr7 exon 73100883 73100953 73100883 ID=MsG0780040105.01.T01:exon:13072;Parent=MsG0780040105.01.T01
Chr7 exon 73103772 73103963 73103772 ID=MsG0780040105.01.T01:exon:13073;Parent=MsG0780040105.01.T01
Chr7 CDS 73098458 73098545 73098458 ID=MsG0780040105.01.T01:cds;Parent=MsG0780040105.01.T01
Chr7 CDS 73098617 73098764 73098617 ID=MsG0780040105.01.T01:cds;Parent=MsG0780040105.01.T01
Chr7 CDS 73099226 73099427 73099226 ID=MsG0780040105.01.T01:cds;Parent=MsG0780040105.01.T01
Chr7 CDS 73099566 73099811 73099566 ID=MsG0780040105.01.T01:cds;Parent=MsG0780040105.01.T01
Chr7 CDS 73099971 73100105 73099971 ID=MsG0780040105.01.T01:cds;Parent=MsG0780040105.01.T01
Chr7 CDS 73100220 73100326 73100220 ID=MsG0780040105.01.T01:cds;Parent=MsG0780040105.01.T01
Chr7 CDS 73100570 73100628 73100570 ID=MsG0780040105.01.T01:cds;Parent=MsG0780040105.01.T01
Chr7 CDS 73100883 73100953 73100883 ID=MsG0780040105.01.T01:cds;Parent=MsG0780040105.01.T01
Chr7 CDS 73103772 73103963 73103772 ID=MsG0780040105.01.T01:cds;Parent=MsG0780040105.01.T01
Gene Sequence

>MsG0780040105.01.T01

ATGGACTCTGAGGAAGCTGATAAGTATATACAAATGGTTAAGGAACAACAGCAGAGGGGGTTGCAGAAGCTTAAGGGTGATAGAGAGGAAAGTTGGTATTGGGAGATTGTTGGGATTAAATTCGATGTTTCGAAGAATTCGATAGAACCTACTGAGTATGTTTTTATTGAGTATGCTGATGGAATGGCTAAGCTTCCTGTTAAACAAGCTTCTAAAATGCTCTATAGATATAGTCTGGCATTGAGCAAGTTGAATGATACTAGTGCATGGGAGAAAAGAAAGACTAAAGGGAAGGTTGCCATACAGAAGATGGTCGTTGACTTGATGGAGCTCTATCTGCATAGGCTTAAACAAAGAAGGCCTCCTTATCCTATGAGTCCTGTCGTGGCTGAATTCGCAGCTAAATTTCTTTATGAACCTACGCCTGATCAGAAACAGGCTTTTATTGATGTTGAGAAGGATTTGACGGAGCGAGAAACTCCAATGGACAGGTTAATTTGTGGAGATGTTGGTTTTGGTAAAACTGAAGTTGCGATGCGTGCCATCCACTGTGTTGTCGCAGCTAAAAAGCAAGCAATGGTTCTCGCACCGACAATAGTTCTAGCAAAACAACATTTTGATGTTATTTCAGAGCGCTTTTCTGTATATCCTGATATTAAAGTTGGACTGCTAAGCAGGTTTCAGACCAGATCAGAGAAGGAAGCATACTTGGAAATGATTAAGAATGGTGACTTAGATATTATTGTTGGAACTCACTCGCTCTTAGGAAACCGTGTTGTTTATAACAATCTTGGCCTGCTTGTGGTTGATGAGGAACAGAAGGAGAGGATTGCTTCTTTTAAAACTTCTGTGGACGTACTTACTTTATCTGCTACGCCTATACCACGGACTCTTTATTTAGCATTGACAGGATTCCGTGATGCTAGTTTAATTTCAACTCCACCTCCAGAAAGAGTTCCTATCAAGACTCAGCTTTCATCATTCAGACTTGAAGAAGCAATGGAATTTCTTGAAGAGGCATTCCCCGATGTGGAAATAGCCGTTGCCCATGGGAAGGAAAGGCTTGCAGCTCTTGAAGAATGTCGTGAACTTGGTCAAGGCTTCCAACTAGCTGAGAGAGACATGGGTATAAGAGGTTTTGGTACTATTTTCGGCGAGCAACAAACAGGAGATGTTGGAAACGTTGGCATCGATCTTTTCTTTGAGATGCTCTTTGAGAGTTTATCCAAGGTAAACTTTGATTTCTGA
Protein sequence

>MsG0780040105.01.T01

MDSEEADKYIQMVKEQQQRGLQKLKGDREESWYWEIVGIKFDVSKNSIEPTEYVFIEYADGMAKLPVKQASKMLYRYSLALSKLNDTSAWEKRKTKGKVAIQKMVVDLMELYLHRLKQRRPPYPMSPVVAEFAAKFLYEPTPDQKQAFIDVEKDLTERETPMDRLICGDVGFGKTEVAMRAIHCVVAAKKQAMVLAPTIVLAKQHFDVISERFSVYPDIKVGLLSRFQTRSEKEAYLEMIKNGDLDIIVGTHSLLGNRVVYNNLGLLVVDEEQKERIASFKTSVDVLTLSATPIPRTLYLALTGFRDASLISTPPPERVPIKTQLSSFRLEEAMEFLEEAFPDVEIAVAHGKERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFESLSKVNFDF*