Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480021213.01.T01 | XP_013456369.1 | 96.168 | 548 | 20 | 1 | 1 | 547 | 1 | 548 | 0 | 1088 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480021213.01.T01 | Q9XIA4 | 67.279 | 544 | 166 | 4 | 11 | 543 | 5 | 547 | 0 | 758 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480021213.01.T01 | A0A072UX27 | 96.168 | 548 | 20 | 1 | 1 | 547 | 1 | 548 | 0.0 | 1088 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047992.01 | MsG0480021213.01 | -0.806922 | 6.500021e-50 | 3.572185e-47 |
| MsG0080048993.01 | MsG0480021213.01 | 0.861043 | 1.353129e-63 | 3.776434e-60 |
| MsG0080049024.01 | MsG0480021213.01 | 0.822847 | 1.902623e-53 | 1.611178e-50 |
| MsG0080049029.01 | MsG0480021213.01 | 0.831075 | 2.050287e-55 | 2.201109e-52 |
| MsG0080049069.01 | MsG0480021213.01 | 0.801714 | 7.902667e-49 | 3.800378e-46 |
| MsG0080049070.01 | MsG0480021213.01 | 0.885341 | 8.838942e-72 | 6.044862e-68 |
| MsG0180000040.01 | MsG0480021213.01 | 0.824064 | 9.879791e-54 | 8.658443e-51 |
| MsG0180000113.01 | MsG0480021213.01 | 0.820921 | 5.312424e-53 | 4.260414e-50 |
| MsG0180000833.01 | MsG0480021213.01 | 0.833603 | 4.850121e-56 | 5.613184e-53 |
| MsG0180000834.01 | MsG0480021213.01 | 0.832278 | 1.035664e-55 | 1.151953e-52 |
| MsG0180001137.01 | MsG0480021213.01 | 0.813487 | 2.496757e-51 | 1.632749e-48 |
| MsG0180001175.01 | MsG0480021213.01 | 0.816679 | 4.884122e-52 | 3.483591e-49 |
| MsG0180001548.01 | MsG0480021213.01 | 0.921076 | 5.685253e-88 | 1.992263e-83 |
| MsG0180001864.01 | MsG0480021213.01 | 0.834666 | 2.627080e-56 | 3.138656e-53 |
| MsG0180001929.01 | MsG0480021213.01 | 0.808331 | 3.264651e-50 | 1.861501e-47 |
| MsG0180002700.01 | MsG0480021213.01 | 0.836196 | 1.078407e-56 | 1.349448e-53 |
| MsG0180003196.01 | MsG0480021213.01 | 0.916279 | 2.156243e-85 | 5.885150e-81 |
| MsG0180003547.01 | MsG0480021213.01 | 0.895171 | 1.234432e-75 | 1.266221e-71 |
| MsG0180003637.01 | MsG0480021213.01 | -0.812217 | 4.737429e-51 | 2.994391e-48 |
| MsG0180004714.01 | MsG0480021213.01 | 0.875442 | 3.072244e-68 | 1.434465e-64 |
| MsG0180004792.01 | MsG0480021213.01 | 0.895079 | 1.346745e-75 | 1.376297e-71 |
| MsG0180004979.01 | MsG0480021213.01 | 0.811599 | 6.460455e-51 | 4.015821e-48 |
| MsG0180005184.01 | MsG0480021213.01 | 0.822135 | 2.784615e-53 | 2.310698e-50 |
| MsG0180005339.01 | MsG0480021213.01 | 0.805143 | 1.538833e-49 | 8.079983e-47 |
| MsG0180005395.01 | MsG0480021213.01 | -0.818107 | 2.329735e-52 | 1.727968e-49 |
| MsG0180005636.01 | MsG0480021213.01 | -0.829519 | 4.919599e-55 | 5.046959e-52 |
| MsG0180005666.01 | MsG0480021213.01 | 0.840909 | 6.546354e-58 | 9.462234e-55 |
| MsG0180005822.01 | MsG0480021213.01 | 0.846091 | 2.699505e-59 | 4.594415e-56 |
| MsG0180005898.01 | MsG0480021213.01 | 0.833068 | 6.594819e-56 | 7.511630e-53 |
| MsG0180005964.01 | MsG0480021213.01 | 0.809018 | 2.327950e-50 | 1.351517e-47 |
| MsG0180006028.01 | MsG0480021213.01 | 0.921456 | 3.496818e-88 | 1.252758e-83 |
| MsG0180006136.01 | MsG0480021213.01 | 0.806558 | 7.759347e-50 | 4.224577e-47 |
| MsG0180006176.01 | MsG0480021213.01 | 0.805683 | 1.186084e-49 | 6.314870e-47 |
| MsG0180006217.01 | MsG0480021213.01 | 0.909771 | 3.940091e-82 | 7.787029e-78 |
| MsG0280010644.01 | MsG0480021213.01 | -0.801050 | 1.080809e-48 | 5.111633e-46 |
| MsG0280010728.01 | MsG0480021213.01 | 0.839178 | 1.851251e-57 | 2.536062e-54 |
| MsG0280011180.01 | MsG0480021213.01 | 0.856245 | 3.664198e-62 | 8.689117e-59 |
| MsG0280011218.01 | MsG0480021213.01 | 0.892202 | 1.972846e-74 | 1.785641e-70 |
| MsG0280011271.01 | MsG0480021213.01 | -0.839922 | 1.185828e-57 | 1.662351e-54 |
| MsG0280011362.01 | MsG0480021213.01 | 0.832013 | 1.204042e-55 | 1.329094e-52 |
| MsG0380011632.01 | MsG0480021213.01 | 0.807609 | 4.650327e-50 | 2.601564e-47 |
| MsG0380011693.01 | MsG0480021213.01 | 0.815801 | 7.674720e-52 | 5.344481e-49 |
| MsG0380012868.01 | MsG0480021213.01 | 0.877448 | 6.236259e-69 | 3.137061e-65 |
| MsG0380014678.01 | MsG0480021213.01 | 0.828813 | 7.294929e-55 | 7.330139e-52 |
| MsG0480018644.01 | MsG0480021213.01 | 0.818547 | 1.851644e-52 | 1.390248e-49 |
| MsG0480018676.01 | MsG0480021213.01 | 0.813905 | 2.020269e-51 | 1.336118e-48 |
| MsG0480018997.01 | MsG0480021213.01 | 0.803070 | 4.154678e-49 | 2.068052e-46 |
| MsG0480019644.01 | MsG0480021213.01 | 0.822797 | 1.954412e-53 | 1.652616e-50 |
| MsG0480019812.01 | MsG0480021213.01 | 0.917964 | 2.792769e-86 | 8.290111e-82 |
| MsG0480020473.01 | MsG0480021213.01 | 0.860487 | 1.996308e-63 | 5.466232e-60 |
| MsG0480020596.01 | MsG0480021213.01 | 0.870236 | 1.700140e-66 | 6.565749e-63 |
| MsG0480021038.01 | MsG0480021213.01 | 0.881003 | 3.444115e-70 | 1.983904e-66 |
| MsG0480021059.01 | MsG0480021213.01 | 0.844214 | 8.682246e-59 | 1.391945e-55 |
| MsG0480021101.01 | MsG0480021213.01 | 0.803975 | 2.696390e-49 | 1.373891e-46 |
| MsG0480021124.01 | MsG0480021213.01 | 0.845888 | 3.066172e-59 | 5.185103e-56 |
| MsG0480021213.01 | MsG0480021248.01 | 0.805991 | 1.021544e-49 | 5.482088e-47 |
| MsG0480021213.01 | MsG0480021783.01 | 0.811077 | 8.383287e-51 | 5.140160e-48 |
| MsG0480021213.01 | MsG0480021817.01 | 0.823894 | 1.083162e-53 | 9.447825e-51 |
| MsG0480021213.01 | MsG0480021967.01 | 0.864943 | 8.450917e-65 | 2.700989e-61 |
| MsG0480021213.01 | MsG0480022113.01 | 0.910259 | 2.287563e-82 | 4.630760e-78 |
| MsG0480021213.01 | MsG0480022154.01 | 0.855737 | 5.162100e-62 | 1.203654e-58 |
| MsG0480021213.01 | MsG0480022162.01 | 0.850034 | 2.203969e-60 | 4.260837e-57 |
| MsG0480021213.01 | MsG0480022240.01 | 0.824371 | 8.368835e-54 | 7.398287e-51 |
| MsG0480021213.01 | MsG0480023406.01 | 0.810106 | 1.359335e-50 | 8.123052e-48 |
| MsG0480021213.01 | MsG0480023454.01 | -0.810073 | 1.381722e-50 | 8.249577e-48 |
| MsG0480021213.01 | MsG0480023466.01 | 0.878538 | 2.589892e-69 | 1.357512e-65 |
| MsG0480021213.01 | MsG0480023495.01 | 0.819864 | 9.283701e-53 | 7.229581e-50 |
| MsG0480021213.01 | MsG0480024011.01 | 0.817046 | 4.039997e-52 | 2.910810e-49 |
| MsG0480021213.01 | MsG0580024285.01 | 0.806319 | 8.715657e-50 | 4.716221e-47 |
| MsG0480021213.01 | MsG0580024872.01 | 0.816846 | 4.481062e-52 | 3.210824e-49 |
| MsG0480021213.01 | MsG0580025252.01 | 0.807714 | 4.417307e-50 | 2.478092e-47 |
| MsG0480021213.01 | MsG0580025366.01 | 0.812370 | 4.387607e-51 | 2.784613e-48 |
| MsG0480021213.01 | MsG0580025502.01 | 0.806299 | 8.801987e-50 | 4.760514e-47 |
| MsG0480021213.01 | MsG0580025565.01 | 0.803962 | 2.713982e-49 | 1.382377e-46 |
| MsG0480021213.01 | MsG0580025627.01 | 0.816603 | 5.078277e-52 | 3.614699e-49 |
| MsG0480021213.01 | MsG0580026298.01 | 0.802015 | 6.854553e-49 | 3.321705e-46 |
| MsG0480021213.01 | MsG0580027183.01 | 0.880186 | 6.754303e-70 | 3.769145e-66 |
| MsG0480021213.01 | MsG0580027189.01 | 0.884712 | 1.517458e-71 | 1.011848e-67 |
| MsG0480021213.01 | MsG0580028306.01 | 0.804479 | 2.118063e-49 | 1.093207e-46 |
| MsG0480021213.01 | MsG0580028495.01 | 0.817227 | 3.678815e-52 | 2.663568e-49 |
| MsG0480021213.01 | MsG0580029325.01 | 0.818741 | 1.673044e-52 | 1.262845e-49 |
| MsG0480021213.01 | MsG0580029511.01 | 0.855781 | 5.011154e-62 | 1.170252e-58 |
| MsG0480021213.01 | MsG0580029751.01 | 0.824229 | 9.040657e-54 | 7.960056e-51 |
| MsG0480021213.01 | MsG0580029862.01 | 0.822574 | 2.203040e-53 | 1.851280e-50 |
| MsG0480021213.01 | MsG0580030063.01 | 0.815324 | 9.801586e-52 | 6.736540e-49 |
| MsG0480021213.01 | MsG0680031449.01 | 0.807125 | 5.888401e-50 | 3.252998e-47 |
| MsG0480021213.01 | MsG0680031826.01 | 0.859146 | 5.058961e-63 | 1.322640e-59 |
| MsG0480021213.01 | MsG0680031829.01 | 0.814504 | 1.489976e-51 | 1.001613e-48 |
| MsG0480021213.01 | MsG0680032431.01 | 0.809274 | 2.051667e-50 | 1.199360e-47 |
| MsG0480021213.01 | MsG0680032769.01 | 0.831552 | 1.564560e-55 | 1.703714e-52 |
| MsG0480021213.01 | MsG0680032850.01 | 0.888939 | 3.781678e-73 | 2.989997e-69 |
| MsG0480021213.01 | MsG0680033852.01 | 0.807975 | 3.886141e-50 | 2.195077e-47 |
| MsG0480021213.01 | MsG0680034759.01 | -0.801829 | 7.485862e-49 | 3.610575e-46 |
| MsG0480021213.01 | MsG0680035532.01 | 0.854576 | 1.122761e-61 | 2.518989e-58 |
| MsG0480021213.01 | MsG0680035664.01 | 0.834818 | 2.405955e-56 | 2.887727e-53 |
| MsG0480021213.01 | MsG0680035665.01 | 0.830071 | 3.610467e-55 | 3.763489e-52 |
| MsG0480021213.01 | MsG0780035965.01 | 0.849711 | 2.713838e-60 | 5.190177e-57 |
| MsG0480021213.01 | MsG0780035976.01 | -0.813925 | 1.999298e-51 | 1.322963e-48 |
| MsG0480021213.01 | MsG0780036008.01 | 0.861496 | 9.849761e-64 | 2.792676e-60 |
| MsG0480021213.01 | MsG0780037186.01 | 0.826084 | 3.294446e-54 | 3.058493e-51 |
| MsG0480021213.01 | MsG0780037363.01 | 0.816475 | 5.424290e-52 | 3.847391e-49 |
| MsG0480021213.01 | MsG0780039161.01 | 0.809450 | 1.881394e-50 | 1.104937e-47 |
| MsG0480021213.01 | MsG0780039902.01 | 0.807952 | 3.931027e-50 | 2.219047e-47 |
| MsG0480021213.01 | MsG0780039955.01 | 0.816917 | 4.317812e-52 | 3.099924e-49 |
| MsG0480021213.01 | MsG0780040105.01 | 0.892076 | 2.214435e-74 | 1.992975e-70 |
| MsG0480021213.01 | MsG0780040214.01 | 0.841667 | 4.135195e-58 | 6.119249e-55 |
| MsG0480021213.01 | MsG0780040236.01 | 0.848722 | 5.114335e-60 | 9.473284e-57 |
| MsG0480021213.01 | MsG0780040277.01 | 0.827244 | 1.741269e-54 | 1.671592e-51 |
| MsG0480021213.01 | MsG0780040550.01 | 0.842018 | 3.339477e-58 | 4.996750e-55 |
| MsG0480021213.01 | MsG0780040670.01 | -0.811064 | 8.437239e-51 | 5.171585e-48 |
| MsG0480021213.01 | MsG0780040684.01 | 0.881917 | 1.610160e-70 | 9.611724e-67 |
| MsG0480021213.01 | MsG0780040965.01 | 0.905807 | 2.902994e-80 | 4.774605e-76 |
| MsG0480021213.01 | MsG0780041331.01 | 0.922555 | 8.443655e-89 | 3.214734e-84 |
| MsG0480021213.01 | MsG0780041361.01 | 0.858577 | 7.487787e-63 | 1.919849e-59 |
| MsG0480021213.01 | MsG0780041385.01 | 0.809404 | 1.924189e-50 | 1.128764e-47 |
| MsG0480021213.01 | MsG0780041442.01 | 0.891974 | 2.432557e-74 | 2.179186e-70 |
| MsG0480021213.01 | MsG0880041847.01 | 0.908650 | 1.356297e-81 | 2.541477e-77 |
| MsG0480021213.01 | MsG0880042019.01 | 0.816835 | 4.506377e-52 | 3.228015e-49 |
| MsG0480021213.01 | MsG0880042086.01 | 0.836045 | 1.177830e-56 | 1.466890e-53 |
| MsG0480021213.01 | MsG0880042278.01 | 0.822207 | 2.680472e-53 | 2.228795e-50 |
| MsG0480021213.01 | MsG0880042415.01 | 0.874485 | 6.511039e-68 | 2.936514e-64 |
| MsG0480021213.01 | MsG0880042512.01 | 0.845141 | 4.886119e-59 | 8.064772e-56 |
| MsG0480021213.01 | MsG0880043024.01 | 0.873053 | 1.980085e-67 | 8.474830e-64 |
| MsG0480021213.01 | MsG0880043056.01 | 0.836868 | 7.269538e-57 | 9.280794e-54 |
| MsG0480021213.01 | MsG0880043092.01 | 0.806796 | 6.913458e-50 | 3.786994e-47 |
| MsG0480021213.01 | MsG0880043290.01 | 0.810852 | 9.382280e-51 | 5.718590e-48 |
| MsG0480021213.01 | MsG0880043476.01 | 0.914282 | 2.301435e-84 | 5.674932e-80 |
| MsG0480021213.01 | MsG0880044834.01 | 0.829572 | 4.776020e-55 | 4.907098e-52 |
| MsG0480021213.01 | MsG0880044901.01 | -0.829220 | 5.813447e-55 | 5.912511e-52 |
| MsG0480021213.01 | MsG0880045312.01 | 0.848966 | 4.374855e-60 | 8.167860e-57 |
| MsG0480021213.01 | MsG0880045327.01 | 0.826102 | 3.260892e-54 | 3.028989e-51 |
| MsG0480021213.01 | MsG0880045444.01 | 0.806916 | 6.519988e-50 | 3.582582e-47 |
| MsG0480021213.01 | MsG0880045648.01 | 0.819004 | 1.457889e-52 | 1.108612e-49 |
| MsG0480021213.01 | MsG0880045703.01 | 0.804342 | 2.261733e-49 | 1.163295e-46 |
| MsG0480021213.01 | MsG0880046054.01 | 0.821753 | 3.413666e-53 | 2.801890e-50 |
| MsG0480021213.01 | MsG0880046124.01 | 0.807134 | 5.863140e-50 | 3.239856e-47 |
| MsG0480021213.01 | MsG0880046267.01 | 0.805040 | 1.617164e-49 | 8.468599e-47 |
| MsG0480021213.01 | MsG0880046324.01 | 0.810294 | 1.238340e-50 | 7.435911e-48 |
| MsG0480021213.01 | MsG0880046759.01 | 0.814107 | 1.822786e-51 | 1.212133e-48 |
| MsG0480021213.01 | MsG0880047207.01 | 0.846156 | 2.592977e-59 | 4.422133e-56 |
| MsG0480021213.01 | MsG0880047312.01 | -0.844640 | 6.669006e-59 | 1.083494e-55 |
| MsG0480021213.01 | MsG0880047435.01 | 0.863057 | 3.266684e-64 | 9.772845e-61 |
| MsG0480021213.01 | MsG0880047656.01 | 0.834378 | 3.102652e-56 | 3.675599e-53 |
| MsG0380015456.01 | MsG0480021213.01 | 0.866351 | 3.038800e-65 | 1.021055e-61 |
| MsG0380015557.01 | MsG0480021213.01 | -0.809224 | 2.102651e-50 | 1.227560e-47 |
| MsG0380015738.01 | MsG0480021213.01 | 0.836222 | 1.061771e-56 | 1.329637e-53 |
| MsG0380015744.01 | MsG0480021213.01 | 0.821188 | 4.611690e-53 | 3.726054e-50 |
| MsG0380016057.01 | MsG0480021213.01 | 0.826253 | 3.002520e-54 | 2.801032e-51 |
| MsG0380016058.01 | MsG0480021213.01 | 0.810394 | 1.178148e-50 | 7.093218e-48 |
| MsG0380016172.01 | MsG0480021213.01 | 0.854714 | 1.023774e-61 | 2.307367e-58 |
| MsG0380016568.01 | MsG0480021213.01 | 0.826701 | 2.348187e-54 | 2.218707e-51 |
| MsG0380016997.01 | MsG0480021213.01 | 0.801707 | 7.930940e-49 | 3.813238e-46 |
| MsG0380017143.01 | MsG0480021213.01 | 0.813294 | 2.752639e-51 | 1.790547e-48 |
| MsG0380017162.01 | MsG0480021213.01 | 0.890082 | 1.358871e-73 | 1.125649e-69 |
| MsG0380017411.01 | MsG0480021213.01 | -0.835344 | 1.772142e-56 | 2.161209e-53 |
| MsG0380017427.01 | MsG0480021213.01 | 0.918165 | 2.179612e-86 | 6.544011e-82 |
| MsG0380017436.01 | MsG0480021213.01 | 0.818356 | 2.045760e-52 | 1.527956e-49 |
| MsG0380017620.01 | MsG0480021213.01 | 0.821197 | 4.589335e-53 | 3.709010e-50 |
| MsG0480018107.01 | MsG0480021213.01 | 0.807955 | 3.924614e-50 | 2.215659e-47 |
| MsG0480018337.01 | MsG0480021213.01 | 0.903719 | 2.594354e-79 | 3.888171e-75 |
| MsG0480018338.01 | MsG0480021213.01 | 0.890531 | 9.054996e-74 | 7.642633e-70 |
| MsG0280006571.01 | MsG0480021213.01 | 0.846348 | 2.297704e-59 | 3.943336e-56 |
| MsG0280006607.01 | MsG0480021213.01 | 0.811389 | 7.172989e-51 | 4.434357e-48 |
| MsG0280007406.01 | MsG0480021213.01 | 0.893180 | 7.988696e-75 | 7.532295e-71 |
| MsG0280007852.01 | MsG0480021213.01 | 0.854649 | 1.069346e-61 | 2.405031e-58 |
| MsG0280007853.01 | MsG0480021213.01 | 0.864177 | 1.467299e-64 | 4.564617e-61 |
| MsG0280008223.01 | MsG0480021213.01 | 0.867878 | 9.889257e-66 | 3.506597e-62 |
| MsG0280008343.01 | MsG0480021213.01 | 0.816554 | 5.208493e-52 | 3.702274e-49 |
| MsG0280008388.01 | MsG0480021213.01 | 0.814528 | 1.471260e-51 | 9.896386e-49 |
| MsG0280008452.01 | MsG0480021213.01 | -0.821264 | 4.429506e-53 | 3.585982e-50 |
| MsG0280009445.01 | MsG0480021213.01 | 0.859761 | 3.306470e-63 | 8.830566e-60 |
| MsG0280009675.01 | MsG0480021213.01 | 0.899134 | 2.675232e-77 | 3.263348e-73 |
| MsG0280010468.01 | MsG0480021213.01 | -0.827750 | 1.316457e-54 | 1.282451e-51 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480021213.01.T01 | MTR_4g069080 | 96.168 | 548 | 20 | 1 | 1 | 547 | 1 | 548 | 0.0 | 1088 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480021213.01.T01 | AT1G49380 | 67.279 | 544 | 166 | 4 | 11 | 543 | 5 | 547 | 0.0 | 758 |
Find 145 sgRNAs with CRISPR-Local
Find 257 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCACACCATAAGGACCTTTC+TGG | 0.163357 | 4:+55241196 | None:intergenic |
| CTTGCAATGTTGGCCCTTCT+TGG | 0.176283 | 4:-55240202 | MsG0480021213.01.T01:CDS |
| TCTAATTTGCCTTTGGCTAT+TGG | 0.216573 | 4:-55241138 | MsG0480021213.01.T01:CDS |
| TTCTGGTTCTTTGAGCTTGC+TGG | 0.229099 | 4:+55241213 | None:intergenic |
| GACATGAATCTCTGTATTAA+AGG | 0.232537 | 4:+55239552 | None:intergenic |
| CAGAGCAAAGTTAGAGTTTC+CGG | 0.234060 | 4:-55237794 | MsG0480021213.01.T01:CDS |
| AATGGAGATAAGAAACTTTA+TGG | 0.238655 | 4:-55239130 | MsG0480021213.01.T01:CDS |
| GATGATGATTCAACTATTTC+AGG | 0.240407 | 4:+55237742 | None:intergenic |
| CAACTGCAAACTTTACATTA+TGG | 0.242539 | 4:+55237397 | None:intergenic |
| AGTGCAGCAGGGAGCTTTAA+AGG | 0.277235 | 4:-55239658 | MsG0480021213.01.T01:CDS |
| TGACATACAAACATACAAAT+TGG | 0.285940 | 4:-55237590 | MsG0480021213.01.T01:three_prime_UTR |
| TTATCTCCATTGATCTTTAG+AGG | 0.290427 | 4:+55239142 | None:intergenic |
| GATGATCTTCAGGGTAATTC+TGG | 0.298793 | 4:+55240299 | None:intergenic |
| AGTATTCACTTCCCTAAATC+AGG | 0.304322 | 4:+55237431 | None:intergenic |
| CCTAACACAGGATGATCTTC+AGG | 0.304432 | 4:+55240289 | None:intergenic |
| GTGATACCATCATATCTTAA+AGG | 0.306162 | 4:+55239244 | None:intergenic |
| ATTTCCCTTCCTTATCATAA+AGG | 0.309945 | 4:+55238414 | None:intergenic |
| ACTCCAATCCGTCTGGTATA+TGG | 0.313882 | 4:+55239222 | None:intergenic |
| CACTCATCAAGGTTTCAAAA+AGG | 0.314179 | 4:-55240141 | MsG0480021213.01.T01:intron |
| TTGAGAAGACATTGATTCAT+AGG | 0.322099 | 4:+55241429 | None:intergenic |
| AGACGTCGGTACTATATTAA+TGG | 0.326408 | 4:-55239959 | MsG0480021213.01.T01:CDS |
| CCTGAAGATCATCCTGTGTT+AGG | 0.327344 | 4:-55240289 | MsG0480021213.01.T01:CDS |
| ATTGTCGTTGTTGATGCAAT+AGG | 0.332912 | 4:-55238335 | MsG0480021213.01.T01:CDS |
| GATTCTCTCTAATTTGCCTT+TGG | 0.333030 | 4:-55241145 | MsG0480021213.01.T01:CDS |
| TCATGTCAACAGATTCTCTA+TGG | 0.335451 | 4:-55239536 | MsG0480021213.01.T01:CDS |
| CAGTTTCAGTTTCCAGTTTG+AGG | 0.335650 | 4:+55241495 | None:intergenic |
| ATAAGAAGAGCTTTGGTATC+TGG | 0.336359 | 4:+55237473 | None:intergenic |
| GATGGGACAACAGTCGTTAT+TGG | 0.338022 | 4:-55237829 | MsG0480021213.01.T01:CDS |
| GATAAGGAAGGGAAATTTGC+AGG | 0.341411 | 4:-55238407 | MsG0480021213.01.T01:CDS |
| TTGTGTAAGTGCAGGCTATA+AGG | 0.342045 | 4:+55240173 | None:intergenic |
| TATAGCACTGCTGTTGATAA+TGG | 0.346092 | 4:-55239695 | MsG0480021213.01.T01:CDS |
| TTGATTGGGAGCTTTGAATT+AGG | 0.356379 | 4:+55238374 | None:intergenic |
| TGTTAACTCTCCTGATGTTA+AGG | 0.369333 | 4:-55239086 | MsG0480021213.01.T01:CDS |
| GTCAATTGTCCTTTATGATA+AGG | 0.380317 | 4:-55238423 | MsG0480021213.01.T01:CDS |
| TCTGAGCCATCAATGTTGAT+TGG | 0.380893 | 4:+55238359 | None:intergenic |
| CTGAGCCATCAATGTTGATT+GGG | 0.384417 | 4:+55238360 | None:intergenic |
| AGGTTCAGTCACTGTGCCTC+AGG | 0.385654 | 4:-55239638 | MsG0480021213.01.T01:CDS |
| GGAAATAAAGACTCTTCAAT+TGG | 0.391431 | 4:-55237657 | MsG0480021213.01.T01:three_prime_UTR |
| ACCTATATTTCTTGCAATGT+TGG | 0.395976 | 4:-55240212 | MsG0480021213.01.T01:CDS |
| AGTTTCAGTTTCCAGTTTGA+GGG | 0.403729 | 4:+55241496 | None:intergenic |
| GGTCAAGAAGTTGAGTAAAA+AGG | 0.404743 | 4:-55241175 | MsG0480021213.01.T01:CDS |
| CCAGTTGTATATGCTGGATT+TGG | 0.416439 | 4:-55238179 | MsG0480021213.01.T01:CDS |
| ACACACACAGTCCCTCAAAC+TGG | 0.417801 | 4:-55241507 | MsG0480021213.01.T01:five_prime_UTR |
| AAAACTCAGGTTTCTCGCCT+TGG | 0.423189 | 4:+55240326 | None:intergenic |
| GGTGCCATAGCCAAGTTATA+AGG | 0.424092 | 4:+55239163 | None:intergenic |
| AAGCTCCCAATCAACATTGA+TGG | 0.424320 | 4:-55238365 | MsG0480021213.01.T01:CDS |
| AAGAACCAGAAAGGTCCTTA+TGG | 0.425770 | 4:-55241201 | MsG0480021213.01.T01:CDS |
| TTGTCGTTGTTGATGCAATA+GGG | 0.434513 | 4:-55238334 | MsG0480021213.01.T01:CDS |
| ACAAGATATAAGAAGAGCTT+TGG | 0.436565 | 4:+55237466 | None:intergenic |
| TGATACCATCATATCTTAAA+GGG | 0.444057 | 4:+55239245 | None:intergenic |
| GAGTAGTGGCTTGGACTTGA+AGG | 0.455565 | 4:-55238312 | MsG0480021213.01.T01:intron |
| GCCAACATTGCAAGAAATAT+AGG | 0.459699 | 4:+55240211 | None:intergenic |
| GACGTCGGTACTATATTAAT+GGG | 0.459990 | 4:-55239958 | MsG0480021213.01.T01:CDS |
| TTCTCCTGTGTGAGTGGTGG+AGG | 0.465251 | 4:+55241261 | None:intergenic |
| GTTAACTCTCCTGATGTTAA+GGG | 0.468560 | 4:-55239085 | MsG0480021213.01.T01:CDS |
| AGCAAGAGGTTCATCTCGTC+CGG | 0.469158 | 4:+55237775 | None:intergenic |
| ATGATGATTCAACTATTTCA+GGG | 0.471460 | 4:+55237743 | None:intergenic |
| GGAGGAACGTTAAGTGCAGC+AGG | 0.475028 | 4:-55239670 | MsG0480021213.01.T01:CDS |
| AACTTCTTGACCACACCATA+AGG | 0.476566 | 4:+55241186 | None:intergenic |
| TCTATGGATTATTATGAAAG+TGG | 0.477182 | 4:-55239520 | MsG0480021213.01.T01:CDS |
| TTAATATAGTACCGACGTCT+TGG | 0.478574 | 4:+55239962 | None:intergenic |
| CGATCTTTCCCTCTTGAACA+TGG | 0.481054 | 4:-55239308 | MsG0480021213.01.T01:CDS |
| CTTTCCCTCTTGAACATGGA+TGG | 0.481191 | 4:-55239304 | MsG0480021213.01.T01:CDS |
| AACATACAAATTGGATGCCA+TGG | 0.481242 | 4:-55237581 | MsG0480021213.01.T01:three_prime_UTR |
| TTTGAACAAGGGATGAAAAG+TGG | 0.482240 | 4:+55241401 | None:intergenic |
| AGTGCTATATGAACGCCAAC+AGG | 0.487373 | 4:+55239709 | None:intergenic |
| CCAAATCCAGCATATACAAC+TGG | 0.494043 | 4:+55238179 | None:intergenic |
| GCATATACAACTGGCACACC+AGG | 0.494175 | 4:+55238188 | None:intergenic |
| ACTTACATTCCCTTAACATC+AGG | 0.494664 | 4:+55239076 | None:intergenic |
| ATGAAGTATATAGCAATGAC+AGG | 0.494962 | 4:-55237619 | MsG0480021213.01.T01:three_prime_UTR |
| TTTGTTGTAGGAGATGTTCT+CGG | 0.496044 | 4:-55239607 | MsG0480021213.01.T01:CDS |
| CTGAAATACTCCAATCCGTC+TGG | 0.496597 | 4:+55239215 | None:intergenic |
| CAGCTATTTATCTCATTCAC+AGG | 0.500481 | 4:-55238132 | MsG0480021213.01.T01:intron |
| CAATGAAGGACCTTATAACT+TGG | 0.502844 | 4:-55239173 | MsG0480021213.01.T01:CDS |
| AAGATATGGGCTTTACAAGA+TGG | 0.504823 | 4:-55237847 | MsG0480021213.01.T01:CDS |
| TCTGTATTAAAGGCATCAGT+TGG | 0.505969 | 4:+55239562 | None:intergenic |
| AACACAACTTCCACTCATCA+AGG | 0.507125 | 4:-55240152 | MsG0480021213.01.T01:CDS |
| GGAGATGTTCTCGGTCCTAC+CGG | 0.507387 | 4:-55239598 | MsG0480021213.01.T01:CDS |
| ATAGCACTGCTGTTGATAAT+GGG | 0.512040 | 4:-55239694 | MsG0480021213.01.T01:CDS |
| GGAGAGTTAACATCTCCAAC+AGG | 0.513280 | 4:+55239097 | None:intergenic |
| TGCAATAGGGAGTAGTGGCT+TGG | 0.516336 | 4:-55238321 | MsG0480021213.01.T01:CDS |
| GGATTATAGGTATTCTTGAA+AGG | 0.517238 | 4:-55239775 | MsG0480021213.01.T01:intron |
| ATTAATGGGAGCTGGATATG+AGG | 0.517838 | 4:-55239944 | MsG0480021213.01.T01:intron |
| CTATGGATTATTATGAAAGT+GGG | 0.518677 | 4:-55239519 | MsG0480021213.01.T01:CDS |
| GGTGTGCCAGTTGTATATGC+TGG | 0.525293 | 4:-55238185 | MsG0480021213.01.T01:CDS |
| ATTGTCCTTTATGATAAGGA+AGG | 0.526577 | 4:-55238419 | MsG0480021213.01.T01:CDS |
| CAAATTCTCAAGGACAATGA+AGG | 0.527947 | 4:-55239187 | MsG0480021213.01.T01:CDS |
| ATGGCACCTCTAAAGATCAA+TGG | 0.528038 | 4:-55239148 | MsG0480021213.01.T01:CDS |
| GTCATTTATGCACTCTGCTG+AGG | 0.533358 | 4:-55240031 | MsG0480021213.01.T01:CDS |
| GGTACTATATTAATGGGAGC+TGG | 0.536365 | 4:-55239952 | MsG0480021213.01.T01:CDS |
| TCACCATATACCAGACGGAT+TGG | 0.537124 | 4:-55239225 | MsG0480021213.01.T01:CDS |
| TTCAGCTCTGCAAATTCTCA+AGG | 0.537400 | 4:-55239197 | MsG0480021213.01.T01:CDS |
| TGTGTCACATGATGTCTTTG+AGG | 0.540282 | 4:-55241455 | MsG0480021213.01.T01:CDS |
| AACGACCCTTTAAGATATGA+TGG | 0.540927 | 4:-55239250 | MsG0480021213.01.T01:CDS |
| TTTGTTGATTGACTCATCCA+TGG | 0.541407 | 4:+55237564 | None:intergenic |
| ACGTCTTGGATTGATGCTCT+TGG | 0.547830 | 4:+55239976 | None:intergenic |
| GCCGGTCGGCTAGCTCCTGT+TGG | 0.547932 | 4:-55239724 | MsG0480021213.01.T01:CDS |
| GTATTCACTTCCCTAAATCA+GGG | 0.548743 | 4:+55237432 | None:intergenic |
| ATCTAAGCAAACTGATAGCA+TGG | 0.557916 | 4:-55237716 | MsG0480021213.01.T01:CDS |
| TTGAACAAGGGATGAAAAGT+GGG | 0.557949 | 4:+55241402 | None:intergenic |
| TATAAGGGATGCACCAAGAA+GGG | 0.561371 | 4:+55240189 | None:intergenic |
| CTAACACAGGATGATCTTCA+GGG | 0.561639 | 4:+55240290 | None:intergenic |
| CTATAAGGGATGCACCAAGA+AGG | 0.562534 | 4:+55240188 | None:intergenic |
| TGTGTAAGTGCAGGCTATAA+GGG | 0.563934 | 4:+55240174 | None:intergenic |
| AGATATGGGCTTTACAAGAT+GGG | 0.567327 | 4:-55237846 | MsG0480021213.01.T01:CDS |
| CCACGAAAAGCATACAAAGT+TGG | 0.570654 | 4:+55239751 | None:intergenic |
| GCCAACAGGAGCTAGCCGAC+CGG | 0.571087 | 4:+55239723 | None:intergenic |
| CATAAAGGACAATTGACTGC+AGG | 0.571577 | 4:+55238429 | None:intergenic |
| CATGTTCAAGAGGGAAAGAT+CGG | 0.573438 | 4:+55239309 | None:intergenic |
| ATTAAAGGCATCAGTTGGAA+AGG | 0.574717 | 4:+55239567 | None:intergenic |
| TTGTCCTTTATGATAAGGAA+GGG | 0.575204 | 4:-55238418 | MsG0480021213.01.T01:CDS |
| GCAAGCTCAAAGAACCAGAA+AGG | 0.582871 | 4:-55241210 | MsG0480021213.01.T01:CDS |
| AGTTCTGTTGAATTTGAACA+AGG | 0.583852 | 4:+55241389 | None:intergenic |
| TGGATGGAAAAGAAGTAATG+AGG | 0.584497 | 4:-55239288 | MsG0480021213.01.T01:CDS |
| GGGACAACAGTCGTTATTGG+AGG | 0.587821 | 4:-55237826 | MsG0480021213.01.T01:CDS |
| TCATCATTCTCCTGTGTGAG+TGG | 0.588845 | 4:+55241255 | None:intergenic |
| TCATTCTCCTGTGTGAGTGG+TGG | 0.589165 | 4:+55241258 | None:intergenic |
| GGTTCAGTCACTGTGCCTCA+GGG | 0.589484 | 4:-55239637 | MsG0480021213.01.T01:CDS |
| TGCAGTTGATGGTGAATGAG+AGG | 0.596112 | 4:+55241349 | None:intergenic |
| GTTGATGCAATAGGGAGTAG+TGG | 0.598418 | 4:-55238326 | MsG0480021213.01.T01:CDS |
| TTCACCTCCACCACTCACAC+AGG | 0.605059 | 4:-55241265 | MsG0480021213.01.T01:CDS |
| AGTTGGAAAGGAAAGAAAGC+CGG | 0.613737 | 4:+55239579 | None:intergenic |
| AGGACCTTATAACTTGGCTA+TGG | 0.614764 | 4:-55239167 | MsG0480021213.01.T01:CDS |
| AACATTTCTCCAATAGCCAA+AGG | 0.619561 | 4:+55241129 | None:intergenic |
| TATGTTACGCAGACTGACCC+TGG | 0.626560 | 4:-55238206 | MsG0480021213.01.T01:intron |
| GCAGTTGATGGTGAATGAGA+GGG | 0.632096 | 4:+55241350 | None:intergenic |
| TAATTCTGGAAATAAAACTC+AGG | 0.635294 | 4:+55240313 | None:intergenic |
| AAGTTGTGTTGTGTAAGTGC+AGG | 0.638222 | 4:+55240165 | None:intergenic |
| GGACAACAGTCGTTATTGGA+GGG | 0.644415 | 4:-55237825 | MsG0480021213.01.T01:CDS |
| CCAGAAAGGTCCTTATGGTG+TGG | 0.650861 | 4:-55241196 | MsG0480021213.01.T01:CDS |
| GAGAATGATGATATCAACAG+TGG | 0.661987 | 4:-55241243 | MsG0480021213.01.T01:CDS |
| CTGCTGTTGATAATGGGTGG+AGG | 0.663763 | 4:-55239688 | MsG0480021213.01.T01:CDS |
| TATGGATTATTATGAAAGTG+GGG | 0.664635 | 4:-55239518 | MsG0480021213.01.T01:CDS |
| AATACATGTGATCAAAACCA+AGG | 0.672461 | 4:+55240239 | None:intergenic |
| TGGTATCACCATATACCAGA+CGG | 0.679132 | 4:-55239230 | MsG0480021213.01.T01:CDS |
| GTTCTGTTGAATTTGAACAA+GGG | 0.681172 | 4:+55241390 | None:intergenic |
| TATTCACTTCCCTAAATCAG+GGG | 0.683600 | 4:+55237433 | None:intergenic |
| GCACTGCTGTTGATAATGGG+TGG | 0.691436 | 4:-55239691 | MsG0480021213.01.T01:CDS |
| GGATTATTATGAAAGTGGGG+AGG | 0.692179 | 4:-55239515 | MsG0480021213.01.T01:intron |
| TGAAGTATATAGCAATGACA+GGG | 0.692723 | 4:-55237618 | MsG0480021213.01.T01:three_prime_UTR |
| CATATACAACTGGCACACCA+GGG | 0.701363 | 4:+55238189 | None:intergenic |
| GAGGAACGTTAAGTGCAGCA+GGG | 0.702940 | 4:-55239669 | MsG0480021213.01.T01:CDS |
| GGAAAGGAAAGAAAGCCGGT+AGG | 0.713048 | 4:+55239583 | None:intergenic |
| AGAGCATCAATCCAAGACGT+CGG | 0.726779 | 4:-55239973 | MsG0480021213.01.T01:CDS |
| ACAACAAAATTCAGACCCTG+AGG | 0.734369 | 4:+55239622 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAATCTTTTTTCTTTTAT+TGG | + | Chr4:55240251-55240270 | None:intergenic | 10.0% |
| !!! | ATTTTGATTAAATTGATTTT+AGG | - | Chr4:55238244-55238263 | MsG0480021213.01.T01:intron | 10.0% |
| !! | AATTAGATAATTGTAATAGT+TGG | - | Chr4:55240220-55240239 | MsG0480021213.01.T01:CDS | 15.0% |
| !! | TCTAAATAACAAAAGTAATA+TGG | + | Chr4:55238064-55238083 | None:intergenic | 15.0% |
| !!! | AAAATGTAATTTTGGATTAT+AGG | - | Chr4:55239092-55239111 | MsG0480021213.01.T01:CDS | 15.0% |
| !!! | AAAGTATTCTTTTCAATATT+TGG | - | Chr4:55239850-55239869 | MsG0480021213.01.T01:intron | 15.0% |
| !!! | ATTTATCGATTTTTTTAAAG+AGG | - | Chr4:55240861-55240880 | MsG0480021213.01.T01:intron | 15.0% |
| !!! | ATTTATCTTATCTTTTGATA+TGG | - | Chr4:55237997-55238016 | MsG0480021213.01.T01:intron | 15.0% |
| !!! | TTTTAGTATATAATTGATCA+TGG | + | Chr4:55240987-55241006 | None:intergenic | 15.0% |
| !!! | TTTTTCGTTTTATATGAAAT+TGG | - | Chr4:55239398-55239417 | MsG0480021213.01.T01:intron | 15.0% |
| !! | AAATTACAAATTAAGTGCAA+AGG | - | Chr4:55240313-55240332 | MsG0480021213.01.T01:CDS | 20.0% |
| !! | AAATTATTCAAGTCTATTGT+TGG | + | Chr4:55239059-55239078 | None:intergenic | 20.0% |
| !! | AACAAAATAGCAAAACAATA+AGG | + | Chr4:55239505-55239524 | None:intergenic | 20.0% |
| !! | ATAAATGACTAAGATATGTT+TGG | + | Chr4:55238435-55238454 | None:intergenic | 20.0% |
| !! | ATTAAGCTATTTATCAAAAC+AGG | - | Chr4:55238038-55238057 | MsG0480021213.01.T01:intron | 20.0% |
| !! | TAAAAATGAGCAAATAACAT+TGG | - | Chr4:55240938-55240957 | MsG0480021213.01.T01:intron | 20.0% |
| !! | TATATAATTGATCATGGATA+AGG | + | Chr4:55240981-55241000 | None:intergenic | 20.0% |
| !! | TATGTAATGAGAACTAAAAA+GGG | + | Chr4:55237866-55237885 | None:intergenic | 20.0% |
| !! | TTTGATCAATTGAAAGATAT+GGG | - | Chr4:55241020-55241039 | MsG0480021213.01.T01:intron | 20.0% |
| !!! | AATGTTATTTGCTCATTTTT+AGG | + | Chr4:55240939-55240958 | None:intergenic | 20.0% |
| !!! | TTAATTTTGATAAGTTCTCT+AGG | - | Chr4:55240039-55240058 | MsG0480021213.01.T01:intron | 20.0% |
| !!! | TTTTGATCAATTGAAAGATA+TGG | - | Chr4:55241019-55241038 | MsG0480021213.01.T01:intron | 20.0% |
| ! | AAATAGTTAAGTGTGAATCA+TGG | + | Chr4:55238975-55238994 | None:intergenic | 25.0% |
| ! | AATGGAGATAAGAAACTTTA+TGG | - | Chr4:55239750-55239769 | MsG0480021213.01.T01:CDS | 25.0% |
| ! | AGTGACATAAACAACTTATT+TGG | - | Chr4:55239930-55239949 | MsG0480021213.01.T01:intron | 25.0% |
| ! | ATCAGATAATTGAAGTAGTT+AGG | - | Chr4:55240184-55240203 | MsG0480021213.01.T01:CDS | 25.0% |
| ! | ATCGAATAAGCACTTAATTA+AGG | - | Chr4:55240118-55240137 | MsG0480021213.01.T01:intron | 25.0% |
| ! | ATGATGATTCAACTATTTCA+GGG | + | Chr4:55241140-55241159 | None:intergenic | 25.0% |
| ! | CTATGTAATGAGAACTAAAA+AGG | + | Chr4:55237867-55237886 | None:intergenic | 25.0% |
| ! | GCTAACATATACTTATCATA+TGG | + | Chr4:55238205-55238224 | None:intergenic | 25.0% |
| ! | GGGTGAACTTTAAATTATTA+TGG | - | Chr4:55238126-55238145 | MsG0480021213.01.T01:intron | 25.0% |
| ! | TAAATGAAAATAACCAGACT+TGG | + | Chr4:55240606-55240625 | None:intergenic | 25.0% |
| ! | TAGATAATTGTAATAGTTGG+AGG | - | Chr4:55240223-55240242 | MsG0480021213.01.T01:CDS | 25.0% |
| ! | TCACTAAAGACAAATTTCTA+TGG | - | Chr4:55238515-55238534 | MsG0480021213.01.T01:intron | 25.0% |
| ! | TGACATACAAACATACAAAT+TGG | - | Chr4:55241290-55241309 | MsG0480021213.01.T01:CDS | 25.0% |
| ! | TGATACCATCATATCTTAAA+GGG | + | Chr4:55239638-55239657 | None:intergenic | 25.0% |
| !! | AATGACTTTTAGGCTATATT+TGG | - | Chr4:55239907-55239926 | MsG0480021213.01.T01:intron | 25.0% |
| !! | ATATACACTTTGACTTATTC+TGG | + | Chr4:55239461-55239480 | None:intergenic | 25.0% |
| !! | ATGTTTTCGATTTATGTTAC+AGG | - | Chr4:55239533-55239552 | MsG0480021213.01.T01:CDS | 25.0% |
| !! | CTATGGATTATTATGAAAGT+GGG | - | Chr4:55239361-55239380 | MsG0480021213.01.T01:intron | 25.0% |
| !! | TAATTAAGGTATTCATCCAA+AGG | - | Chr4:55240132-55240151 | MsG0480021213.01.T01:intron | 25.0% |
| !! | TAATTCTGGAAATAAAACTC+AGG | + | Chr4:55238570-55238589 | None:intergenic | 25.0% |
| !! | TATGGATTATTATGAAAGTG+GGG | - | Chr4:55239362-55239381 | MsG0480021213.01.T01:intron | 25.0% |
| !! | TCTATGGATTATTATGAAAG+TGG | - | Chr4:55239360-55239379 | MsG0480021213.01.T01:intron | 25.0% |
| !! | TTTAGGTAAAAGTGTGTTTA+CGG | - | Chr4:55238261-55238280 | MsG0480021213.01.T01:intron | 25.0% |
| !!! | ATTGCTTTTTTAATGGGTTT+GGG | - | Chr4:55237778-55237797 | MsG0480021213.01.T01:CDS | 25.0% |
| !!! | CGCATTTAAAATTGATTTTG+AGG | + | Chr4:55238490-55238509 | None:intergenic | 25.0% |
| !!! | CTTTTTAGTTCTCATTACAT+AGG | - | Chr4:55237865-55237884 | MsG0480021213.01.T01:intron | 25.0% |
| !!! | TTCACCATTGCTTTTTTAAT+GGG | - | Chr4:55237772-55237791 | MsG0480021213.01.T01:CDS | 25.0% |
| AATACATGTGATCAAAACCA+AGG | + | Chr4:55238644-55238663 | None:intergenic | 30.0% | |
| AATGACTAAGATATGTTTGG+TGG | + | Chr4:55238432-55238451 | None:intergenic | 30.0% | |
| ACAAGATATAAGAAGAGCTT+TGG | + | Chr4:55241417-55241436 | None:intergenic | 30.0% | |
| ACCTATATTTCTTGCAATGT+TGG | - | Chr4:55238668-55238687 | MsG0480021213.01.T01:intron | 30.0% | |
| AGTTCTGTTGAATTTGAACA+AGG | + | Chr4:55237494-55237513 | None:intergenic | 30.0% | |
| ATATAGCCTAAAAGTCATTG+AGG | + | Chr4:55239906-55239925 | None:intergenic | 30.0% | |
| ATCAAGGTTTCAAAAAGGTT+TGG | - | Chr4:55238744-55238763 | MsG0480021213.01.T01:intron | 30.0% | |
| ATGAAGTATATAGCAATGAC+AGG | - | Chr4:55241261-55241280 | MsG0480021213.01.T01:CDS | 30.0% | |
| ATTGTCCTTTATGATAAGGA+AGG | - | Chr4:55240461-55240480 | MsG0480021213.01.T01:intron | 30.0% | |
| ATTTCCCTTCCTTATCATAA+AGG | + | Chr4:55240469-55240488 | None:intergenic | 30.0% | |
| CAAACCCATTAAAAAAGCAA+TGG | + | Chr4:55237779-55237798 | None:intergenic | 30.0% | |
| CAACTGCAAACTTTACATTA+TGG | + | Chr4:55241486-55241505 | None:intergenic | 30.0% | |
| CAAGTAAAAAATCCTAACAC+AGG | + | Chr4:55238606-55238625 | None:intergenic | 30.0% | |
| GACATGAATCTCTGTATTAA+AGG | + | Chr4:55239331-55239350 | None:intergenic | 30.0% | |
| GATGATGATTCAACTATTTC+AGG | + | Chr4:55241141-55241160 | None:intergenic | 30.0% | |
| GGAAATAAAGACTCTTCAAT+TGG | - | Chr4:55241223-55241242 | MsG0480021213.01.T01:CDS | 30.0% | |
| GGATTATAGGTATTCTTGAA+AGG | - | Chr4:55239105-55239124 | MsG0480021213.01.T01:CDS | 30.0% | |
| GTCAATTGTCCTTTATGATA+AGG | - | Chr4:55240457-55240476 | MsG0480021213.01.T01:intron | 30.0% | |
| GTGATACCATCATATCTTAA+AGG | + | Chr4:55239639-55239658 | None:intergenic | 30.0% | |
| GTTCTGTTGAATTTGAACAA+GGG | + | Chr4:55237493-55237512 | None:intergenic | 30.0% | |
| TAAAGACAAATTTCTATGGC+AGG | - | Chr4:55238519-55238538 | MsG0480021213.01.T01:intron | 30.0% | |
| TAACATAAGCATTAGGCAAT+AGG | + | Chr4:55240661-55240680 | None:intergenic | 30.0% | |
| TCGATAAATGAAAGCAACAT+TGG | + | Chr4:55240850-55240869 | None:intergenic | 30.0% | |
| TGAAGTATATAGCAATGACA+GGG | - | Chr4:55241262-55241281 | MsG0480021213.01.T01:CDS | 30.0% | |
| TTATCTCCATTGATCTTTAG+AGG | + | Chr4:55239741-55239760 | None:intergenic | 30.0% | |
| TTGTCCTTTATGATAAGGAA+GGG | - | Chr4:55240462-55240481 | MsG0480021213.01.T01:intron | 30.0% | |
| ! | AATATTTTCACGTGAAAGTG+AGG | - | Chr4:55238302-55238321 | MsG0480021213.01.T01:intron | 30.0% |
| ! | GCGCTAACAAAATGTAATTT+TGG | - | Chr4:55239084-55239103 | MsG0480021213.01.T01:CDS | 30.0% |
| ! | TAAGTATATGTTAGCTTCTG+TGG | - | Chr4:55238210-55238229 | MsG0480021213.01.T01:intron | 30.0% |
| ! | TATACGTAAGCAAGAGTTTT+CGG | - | Chr4:55238873-55238892 | MsG0480021213.01.T01:intron | 30.0% |
| ! | TCAATCAACAAAACTTTTGC+AGG | - | Chr4:55241327-55241346 | MsG0480021213.01.T01:CDS | 30.0% |
| ! | TTTTCTGTGTTCATAATGCT+TGG | - | Chr4:55238779-55238798 | MsG0480021213.01.T01:intron | 30.0% |
| !! | TTGAGAAGACATTGATTCAT+AGG | + | Chr4:55237454-55237473 | None:intergenic | 30.0% |
| !!! | ATTATTTTTGCCCCTGATTT+AGG | - | Chr4:55241437-55241456 | MsG0480021213.01.T01:CDS | 30.0% |
| !!! | CATTGCTTTTTTAATGGGTT+TGG | - | Chr4:55237777-55237796 | MsG0480021213.01.T01:CDS | 30.0% |
| !!! | CTGTGTTAGGATTTTTTACT+TGG | - | Chr4:55238604-55238623 | MsG0480021213.01.T01:intron | 30.0% |
| !!! | GTTCACCATTGCTTTTTTAA+TGG | - | Chr4:55237771-55237790 | MsG0480021213.01.T01:CDS | 30.0% |
| !!! | TAGGATTTTTTACTTGGAGA+TGG | - | Chr4:55238610-55238629 | MsG0480021213.01.T01:intron | 30.0% |
| !!! | TATTCTTTCCCTTGTTTTTG+AGG | + | Chr4:55237558-55237577 | None:intergenic | 30.0% |
| !!! | TTATAGCTTTTGAGACATCA+AGG | - | Chr4:55241198-55241217 | MsG0480021213.01.T01:CDS | 30.0% |
| !!! | TTATTTTTGCCCCTGATTTA+GGG | - | Chr4:55241438-55241457 | MsG0480021213.01.T01:CDS | 30.0% |
| AACATACAAATTGGATGCCA+TGG | - | Chr4:55241299-55241318 | MsG0480021213.01.T01:CDS | 35.0% | |
| AACATTTCTCCAATAGCCAA+AGG | + | Chr4:55237754-55237773 | None:intergenic | 35.0% | |
| AACTGCAACCTCAAAAACAA+GGG | - | Chr4:55237547-55237566 | MsG0480021213.01.T01:three_prime_UTR | 35.0% | |
| AAGATATGGGCTTTACAAGA+TGG | - | Chr4:55241033-55241052 | MsG0480021213.01.T01:intron | 35.0% | |
| ACTTACATTCCCTTAACATC+AGG | + | Chr4:55239807-55239826 | None:intergenic | 35.0% | |
| AGACGTCGGTACTATATTAA+TGG | - | Chr4:55238921-55238940 | MsG0480021213.01.T01:intron | 35.0% | |
| AGATATGGGCTTTACAAGAT+GGG | - | Chr4:55241034-55241053 | MsG0480021213.01.T01:intron | 35.0% | |
| AGCCTTCGTAAATACTCTTT+AGG | + | Chr4:55239977-55239996 | None:intergenic | 35.0% | |
| AGTATTCACTTCCCTAAATC+AGG | + | Chr4:55241452-55241471 | None:intergenic | 35.0% | |
| AGTCTAAAAATCACGATCGA+AGG | - | Chr4:55238340-55238359 | MsG0480021213.01.T01:CDS | 35.0% | |
| AGTTTCAGTTTCCAGTTTGA+GGG | + | Chr4:55237387-55237406 | None:intergenic | 35.0% | |
| ATCTAAGCAAACTGATAGCA+TGG | - | Chr4:55241164-55241183 | MsG0480021213.01.T01:CDS | 35.0% | |
| ATTATAGGCTAGGACTTGAT+AGG | - | Chr4:55240342-55240361 | MsG0480021213.01.T01:CDS | 35.0% | |
| ATTGTCGTTGTTGATGCAAT+AGG | - | Chr4:55240545-55240564 | MsG0480021213.01.T01:intron | 35.0% | |
| CAAATTCTCAAGGACAATGA+AGG | - | Chr4:55239693-55239712 | MsG0480021213.01.T01:CDS | 35.0% | |
| CAATGAAGGACCTTATAACT+TGG | - | Chr4:55239707-55239726 | MsG0480021213.01.T01:CDS | 35.0% | |
| CACTCATCAAGGTTTCAAAA+AGG | - | Chr4:55238739-55238758 | MsG0480021213.01.T01:intron | 35.0% | |
| CAGCTATTTATCTCATTCAC+AGG | - | Chr4:55240748-55240767 | MsG0480021213.01.T01:intron | 35.0% | |
| GACCATCTACGAAACAAATA+AGG | + | Chr4:55238832-55238851 | None:intergenic | 35.0% | |
| GACGTCGGTACTATATTAAT+GGG | - | Chr4:55238922-55238941 | MsG0480021213.01.T01:intron | 35.0% | |
| GAGAATGATGATATCAACAG+TGG | - | Chr4:55237637-55237656 | MsG0480021213.01.T01:three_prime_UTR | 35.0% | |
| GCCAACATTGCAAGAAATAT+AGG | + | Chr4:55238672-55238691 | None:intergenic | 35.0% | |
| GGTCAAGAAGTTGAGTAAAA+AGG | - | Chr4:55237705-55237724 | MsG0480021213.01.T01:exon | 35.0% | |
| GTATTCACTTCCCTAAATCA+GGG | + | Chr4:55241451-55241470 | None:intergenic | 35.0% | |
| GTTAACTCTCCTGATGTTAA+GGG | - | Chr4:55239795-55239814 | MsG0480021213.01.T01:intron | 35.0% | |
| TATCAAGTCCTAGCCTATAA+TGG | + | Chr4:55240343-55240362 | None:intergenic | 35.0% | |
| TATTCACTTCCCTAAATCAG+GGG | + | Chr4:55241450-55241469 | None:intergenic | 35.0% | |
| TCATGTCAACAGATTCTCTA+TGG | - | Chr4:55239344-55239363 | MsG0480021213.01.T01:intron | 35.0% | |
| TCCTCAAGTTTGTGAATTGT+GGG | - | Chr4:55238106-55238125 | MsG0480021213.01.T01:intron | 35.0% | |
| TGGATGGAAAAGAAGTAATG+AGG | - | Chr4:55239592-55239611 | MsG0480021213.01.T01:CDS | 35.0% | |
| TGTTAACTCTCCTGATGTTA+AGG | - | Chr4:55239794-55239813 | MsG0480021213.01.T01:intron | 35.0% | |
| TTATGCATATGGCATTTGTC+TGG | + | Chr4:55240906-55240925 | None:intergenic | 35.0% | |
| TTGAACAAGGGATGAAAAGT+GGG | + | Chr4:55237481-55237500 | None:intergenic | 35.0% | |
| TTGTCGTTGTTGATGCAATA+GGG | - | Chr4:55240546-55240565 | MsG0480021213.01.T01:intron | 35.0% | |
| TTTGAACAAGGGATGAAAAG+TGG | + | Chr4:55237482-55237501 | None:intergenic | 35.0% | |
| ! | AAAGAGACGCGATTTTTATG+TGG | + | Chr4:55241512-55241531 | None:intergenic | 35.0% |
| ! | ATAAGAAGAGCTTTGGTATC+TGG | + | Chr4:55241410-55241429 | None:intergenic | 35.0% |
| ! | GATTCTCTCTAATTTGCCTT+TGG | - | Chr4:55237735-55237754 | MsG0480021213.01.T01:CDS | 35.0% |
| ! | GCATTTCCTCAATGACTTTT+AGG | - | Chr4:55239897-55239916 | MsG0480021213.01.T01:intron | 35.0% |
| ! | GGTTTCAAAAAGGTTTGGTT+TGG | - | Chr4:55238749-55238768 | MsG0480021213.01.T01:intron | 35.0% |
| ! | TATAGCACTGCTGTTGATAA+TGG | - | Chr4:55239185-55239204 | MsG0480021213.01.T01:CDS | 35.0% |
| ! | TATGGTACTTTTCTACCTGT+TGG | - | Chr4:55239768-55239787 | MsG0480021213.01.T01:CDS | 35.0% |
| ! | TCTAATTTGCCTTTGGCTAT+TGG | - | Chr4:55237742-55237761 | MsG0480021213.01.T01:CDS | 35.0% |
| ! | TTTGTTGATTGACTCATCCA+TGG | + | Chr4:55241319-55241338 | None:intergenic | 35.0% |
| ! | TTTGTTGTAGGAGATGTTCT+CGG | - | Chr4:55239273-55239292 | MsG0480021213.01.T01:CDS | 35.0% |
| ! | TTTTCCATCCATGTTCAAGA+GGG | + | Chr4:55239583-55239602 | None:intergenic | 35.0% |
| !! | AACGACCCTTTAAGATATGA+TGG | - | Chr4:55239630-55239649 | MsG0480021213.01.T01:CDS | 35.0% |
| !! | AAGCTTTGAAAACTGTTCCT+AGG | - | Chr4:55239873-55239892 | MsG0480021213.01.T01:intron | 35.0% |
| !! | ATAGCACTGCTGTTGATAAT+GGG | - | Chr4:55239186-55239205 | MsG0480021213.01.T01:CDS | 35.0% |
| !! | ATTAAAGGCATCAGTTGGAA+AGG | + | Chr4:55239316-55239335 | None:intergenic | 35.0% |
| !! | CACCTAAAGAGTATTTACGA+AGG | - | Chr4:55239972-55239991 | MsG0480021213.01.T01:CDS | 35.0% |
| !! | TCTGTATTAAAGGCATCAGT+TGG | + | Chr4:55239321-55239340 | None:intergenic | 35.0% |
| !! | TTAATATAGTACCGACGTCT+TGG | + | Chr4:55238921-55238940 | None:intergenic | 35.0% |
| !! | TTGATTGGGAGCTTTGAATT+AGG | + | Chr4:55240509-55240528 | None:intergenic | 35.0% |
| !!! | CTTTTTGAAACCTTGATGAG+TGG | + | Chr4:55238741-55238760 | None:intergenic | 35.0% |
| AACACAACTTCCACTCATCA+AGG | - | Chr4:55238728-55238747 | MsG0480021213.01.T01:intron | 40.0% | |
| AACTTCTTGACCACACCATA+AGG | + | Chr4:55237697-55237716 | None:intergenic | 40.0% | |
| AAGAACCAGAAAGGTCCTTA+TGG | - | Chr4:55237679-55237698 | MsG0480021213.01.T01:three_prime_UTR | 40.0% | |
| AAGCTCCCAATCAACATTGA+TGG | - | Chr4:55240515-55240534 | MsG0480021213.01.T01:intron | 40.0% | |
| AAGGACTACCATTATAGGCT+AGG | - | Chr4:55240332-55240351 | MsG0480021213.01.T01:CDS | 40.0% | |
| AAGTTGTGTTGTGTAAGTGC+AGG | + | Chr4:55238718-55238737 | None:intergenic | 40.0% | |
| ACAACAAAATTCAGACCCTG+AGG | + | Chr4:55239261-55239280 | None:intergenic | 40.0% | |
| ACCCACAATTCACAAACTTG+AGG | + | Chr4:55238110-55238129 | None:intergenic | 40.0% | |
| AGGACCTTATAACTTGGCTA+TGG | - | Chr4:55239713-55239732 | MsG0480021213.01.T01:CDS | 40.0% | |
| AGGAGTCCTTAGTGAATGAT+TGG | - | Chr4:55240152-55240171 | MsG0480021213.01.T01:CDS | 40.0% | |
| AGTCCTTAGTGAATGATTGG+GGG | - | Chr4:55240155-55240174 | MsG0480021213.01.T01:CDS | 40.0% | |
| AGTCTCACAAGTGTTTACGT+CGG | + | Chr4:55237924-55237943 | None:intergenic | 40.0% | |
| AGTTGGAAAGGAAAGAAAGC+CGG | + | Chr4:55239304-55239323 | None:intergenic | 40.0% | |
| ATTAATGGGAGCTGGATATG+AGG | - | Chr4:55238936-55238955 | MsG0480021213.01.T01:intron | 40.0% | |
| CAACTGCAACCTCAAAAACA+AGG | - | Chr4:55237546-55237565 | MsG0480021213.01.T01:three_prime_UTR | 40.0% | |
| CAGAGCAAAGTTAGAGTTTC+CGG | - | Chr4:55241086-55241105 | MsG0480021213.01.T01:intron | 40.0% | |
| CAGTTTCAGTTTCCAGTTTG+AGG | + | Chr4:55237388-55237407 | None:intergenic | 40.0% | |
| CATAAAGGACAATTGACTGC+AGG | + | Chr4:55240454-55240473 | None:intergenic | 40.0% | |
| CATGTTCAAGAGGGAAAGAT+CGG | + | Chr4:55239574-55239593 | None:intergenic | 40.0% | |
| CCAAATCCAGCATATACAAC+TGG | + | Chr4:55240704-55240723 | None:intergenic | 40.0% | |
| CCAGTTGTATATGCTGGATT+TGG | - | Chr4:55240701-55240720 | MsG0480021213.01.T01:intron | 40.0% | |
| CGACATTTCTTGATCACTGA+GGG | - | Chr4:55238806-55238825 | MsG0480021213.01.T01:intron | 40.0% | |
| CTAACACAGGATGATCTTCA+GGG | + | Chr4:55238593-55238612 | None:intergenic | 40.0% | |
| CTCCTCAAGTTTGTGAATTG+TGG | - | Chr4:55238105-55238124 | MsG0480021213.01.T01:intron | 40.0% | |
| GAGTCCTTAGTGAATGATTG+GGG | - | Chr4:55240154-55240173 | MsG0480021213.01.T01:CDS | 40.0% | |
| GATAAGGAAGGGAAATTTGC+AGG | - | Chr4:55240473-55240492 | MsG0480021213.01.T01:intron | 40.0% | |
| GATGATCTTCAGGGTAATTC+TGG | + | Chr4:55238584-55238603 | None:intergenic | 40.0% | |
| GCGTCGTCTAATTATGCATA+TGG | + | Chr4:55240917-55240936 | None:intergenic | 40.0% | |
| GGAGTCCTTAGTGAATGATT+GGG | - | Chr4:55240153-55240172 | MsG0480021213.01.T01:CDS | 40.0% | |
| GGATTATTATGAAAGTGGGG+AGG | - | Chr4:55239365-55239384 | MsG0480021213.01.T01:intron | 40.0% | |
| GGTACTATATTAATGGGAGC+TGG | - | Chr4:55238928-55238947 | MsG0480021213.01.T01:intron | 40.0% | |
| GTCTGCGTAACATAAGCATT+AGG | + | Chr4:55240668-55240687 | None:intergenic | 40.0% | |
| GTGCAAAGGACTACCATTAT+AGG | - | Chr4:55240327-55240346 | MsG0480021213.01.T01:CDS | 40.0% | |
| TAGGACTTGATAGGTCATTC+TGG | - | Chr4:55240351-55240370 | MsG0480021213.01.T01:intron | 40.0% | |
| TATAAGGGATGCACCAAGAA+GGG | + | Chr4:55238694-55238713 | None:intergenic | 40.0% | |
| TCATTCACTAAGGACTCCTT+TGG | + | Chr4:55240151-55240170 | None:intergenic | 40.0% | |
| TCTGAGCCATCAATGTTGAT+TGG | + | Chr4:55240524-55240543 | None:intergenic | 40.0% | |
| TGGTATCACCATATACCAGA+CGG | - | Chr4:55239650-55239669 | MsG0480021213.01.T01:CDS | 40.0% | |
| TGTGTAAGTGCAGGCTATAA+GGG | + | Chr4:55238709-55238728 | None:intergenic | 40.0% | |
| TGTGTCACATGATGTCTTTG+AGG | - | Chr4:55237425-55237444 | MsG0480021213.01.T01:three_prime_UTR | 40.0% | |
| TTCAGCTCTGCAAATTCTCA+AGG | - | Chr4:55239683-55239702 | MsG0480021213.01.T01:CDS | 40.0% | |
| TTGTGTAAGTGCAGGCTATA+AGG | + | Chr4:55238710-55238729 | None:intergenic | 40.0% | |
| ! | AGAGTATTTACGAAGGCTTG+TGG | - | Chr4:55239979-55239998 | MsG0480021213.01.T01:CDS | 40.0% |
| ! | ATGGCACCTCTAAAGATCAA+TGG | - | Chr4:55239732-55239751 | MsG0480021213.01.T01:CDS | 40.0% |
| ! | CCAACTTTGTATGCTTTTCG+TGG | - | Chr4:55239129-55239148 | MsG0480021213.01.T01:CDS | 40.0% |
| ! | CCACGAAAAGCATACAAAGT+TGG | + | Chr4:55239132-55239151 | None:intergenic | 40.0% |
| ! | CTGAGCCATCAATGTTGATT+GGG | + | Chr4:55240523-55240542 | None:intergenic | 40.0% |
| ! | CTTTTCCATCCATGTTCAAG+AGG | + | Chr4:55239584-55239603 | None:intergenic | 40.0% |
| !! | CAGGGTCTGAATTTTGTTGT+AGG | - | Chr4:55239261-55239280 | MsG0480021213.01.T01:CDS | 40.0% |
| !! | GGCCTTATTTGTTTCGTAGA+TGG | - | Chr4:55238827-55238846 | MsG0480021213.01.T01:intron | 40.0% |
| !! | TGGAGATGGATTTTCTTCCT+TGG | - | Chr4:55238624-55238643 | MsG0480021213.01.T01:intron | 40.0% |
| !!! | AGCTTTTGAGACATCAAGGT+GGG | - | Chr4:55241202-55241221 | MsG0480021213.01.T01:CDS | 40.0% |
| !!! | GTTTTTGAGGTTGCAGTTGA+TGG | + | Chr4:55237545-55237564 | None:intergenic | 40.0% |
| !!! | TAGCTTTTGAGACATCAAGG+TGG | - | Chr4:55241201-55241220 | MsG0480021213.01.T01:CDS | 40.0% |
| AAAACTCAGGTTTCTCGCCT+TGG | + | Chr4:55238557-55238576 | None:intergenic | 45.0% | |
| ACGTCTTGGATTGATGCTCT+TGG | + | Chr4:55238907-55238926 | None:intergenic | 45.0% | |
| ACTCCAATCCGTCTGGTATA+TGG | + | Chr4:55239661-55239680 | None:intergenic | 45.0% | |
| AGGCAATAGGTCAGTGACAA+AGG | + | Chr4:55240648-55240667 | None:intergenic | 45.0% | |
| AGTGCTATATGAACGCCAAC+AGG | + | Chr4:55239174-55239193 | None:intergenic | 45.0% | |
| CATATACAACTGGCACACCA+GGG | + | Chr4:55240694-55240713 | None:intergenic | 45.0% | |
| CCTAACACAGGATGATCTTC+AGG | + | Chr4:55238594-55238613 | None:intergenic | 45.0% | |
| CCTGAAGATCATCCTGTGTT+AGG | - | Chr4:55238591-55238610 | MsG0480021213.01.T01:intron | 45.0% | |
| CGATCTTTCCCTCTTGAACA+TGG | - | Chr4:55239572-55239591 | MsG0480021213.01.T01:CDS | 45.0% | |
| CTATAAGGGATGCACCAAGA+AGG | + | Chr4:55238695-55238714 | None:intergenic | 45.0% | |
| CTGAAATACTCCAATCCGTC+TGG | + | Chr4:55239668-55239687 | None:intergenic | 45.0% | |
| CTTTCCCTCTTGAACATGGA+TGG | - | Chr4:55239576-55239595 | MsG0480021213.01.T01:CDS | 45.0% | |
| GATGGGACAACAGTCGTTAT+TGG | - | Chr4:55241051-55241070 | MsG0480021213.01.T01:intron | 45.0% | |
| GCAAGCTCAAAGAACCAGAA+AGG | - | Chr4:55237670-55237689 | MsG0480021213.01.T01:three_prime_UTR | 45.0% | |
| GCGACATTTCTTGATCACTG+AGG | - | Chr4:55238805-55238824 | MsG0480021213.01.T01:intron | 45.0% | |
| GGACAACAGTCGTTATTGGA+GGG | - | Chr4:55241055-55241074 | MsG0480021213.01.T01:intron | 45.0% | |
| GGAGAGTTAACATCTCCAAC+AGG | + | Chr4:55239786-55239805 | None:intergenic | 45.0% | |
| GTCATTGAGGAAATGCTCCT+AGG | + | Chr4:55239893-55239912 | None:intergenic | 45.0% | |
| GTCATTTATGCACTCTGCTG+AGG | - | Chr4:55238849-55238868 | MsG0480021213.01.T01:intron | 45.0% | |
| GTGTGAGATTAAGCCAAGTC+TGG | - | Chr4:55240590-55240609 | MsG0480021213.01.T01:intron | 45.0% | |
| GTTGATGCAATAGGGAGTAG+TGG | - | Chr4:55240554-55240573 | MsG0480021213.01.T01:intron | 45.0% | |
| TCACCATATACCAGACGGAT+TGG | - | Chr4:55239655-55239674 | MsG0480021213.01.T01:CDS | 45.0% | |
| TCATCATTCTCCTGTGTGAG+TGG | + | Chr4:55237628-55237647 | None:intergenic | 45.0% | |
| TCTCCCCCAATCATTCACTA+AGG | + | Chr4:55240161-55240180 | None:intergenic | 45.0% | |
| ! | AGAGCATCAATCCAAGACGT+CGG | - | Chr4:55238907-55238926 | MsG0480021213.01.T01:intron | 45.0% |
| ! | CAGGGATTTTGTCAAGCAAG+AGG | + | Chr4:55241122-55241141 | None:intergenic | 45.0% |
| ! | GCAGGCACTTTTATTGACCA+AGG | - | Chr4:55238537-55238556 | MsG0480021213.01.T01:intron | 45.0% |
| ! | GGTGCCATAGCCAAGTTATA+AGG | + | Chr4:55239720-55239739 | None:intergenic | 45.0% |
| ! | TATGCTTTTCGTGGACTTGC+CGG | - | Chr4:55239138-55239157 | MsG0480021213.01.T01:CDS | 45.0% |
| !! | GCAGTTGATGGTGAATGAGA+GGG | + | Chr4:55237533-55237552 | None:intergenic | 45.0% |
| !! | TGCAGTTGATGGTGAATGAG+AGG | + | Chr4:55237534-55237553 | None:intergenic | 45.0% |
| !! | TTCTGGTTCTTTGAGCTTGC+TGG | + | Chr4:55237670-55237689 | None:intergenic | 45.0% |
| ACACACACAGTCCCTCAAAC+TGG | - | Chr4:55237373-55237392 | MsG0480021213.01.T01:three_prime_UTR | 50.0% | |
| AGCAAGAGGTTCATCTCGTC+CGG | + | Chr4:55241108-55241127 | None:intergenic | 50.0% | |
| CCACACCATAAGGACCTTTC+TGG | + | Chr4:55237687-55237706 | None:intergenic | 50.0% | |
| CCAGAAAGGTCCTTATGGTG+TGG | - | Chr4:55237684-55237703 | MsG0480021213.01.T01:three_prime_UTR | 50.0% | |
| CTTGCAATGTTGGCCCTTCT+TGG | - | Chr4:55238678-55238697 | MsG0480021213.01.T01:intron | 50.0% | |
| GAGGAACGTTAAGTGCAGCA+GGG | - | Chr4:55239211-55239230 | MsG0480021213.01.T01:CDS | 50.0% | |
| GCATATACAACTGGCACACC+AGG | + | Chr4:55240695-55240714 | None:intergenic | 50.0% | |
| GGAAAGGAAAGAAAGCCGGT+AGG | + | Chr4:55239300-55239319 | None:intergenic | 50.0% | |
| GGGACAACAGTCGTTATTGG+AGG | - | Chr4:55241054-55241073 | MsG0480021213.01.T01:intron | 50.0% | |
| GGTGTGCCAGTTGTATATGC+TGG | - | Chr4:55240695-55240714 | MsG0480021213.01.T01:intron | 50.0% | |
| TATGTTACGCAGACTGACCC+TGG | - | Chr4:55240674-55240693 | MsG0480021213.01.T01:intron | 50.0% | |
| TCATTCTCCTGTGTGAGTGG+TGG | + | Chr4:55237625-55237644 | None:intergenic | 50.0% | |
| TGCAATAGGGAGTAGTGGCT+TGG | - | Chr4:55240559-55240578 | MsG0480021213.01.T01:intron | 50.0% | |
| ! | AGTGCAGCAGGGAGCTTTAA+AGG | - | Chr4:55239222-55239241 | MsG0480021213.01.T01:CDS | 50.0% |
| ! | GAGTAGTGGCTTGGACTTGA+AGG | - | Chr4:55240568-55240587 | MsG0480021213.01.T01:intron | 50.0% |
| !! | CTGCTGTTGATAATGGGTGG+AGG | - | Chr4:55239192-55239211 | MsG0480021213.01.T01:CDS | 50.0% |
| !! | GCACTGCTGTTGATAATGGG+TGG | - | Chr4:55239189-55239208 | MsG0480021213.01.T01:CDS | 50.0% |
| AGGTTCAGTCACTGTGCCTC+AGG | - | Chr4:55239242-55239261 | MsG0480021213.01.T01:CDS | 55.0% | |
| GGAGATGTTCTCGGTCCTAC+CGG | - | Chr4:55239282-55239301 | MsG0480021213.01.T01:CDS | 55.0% | |
| GGAGGAACGTTAAGTGCAGC+AGG | - | Chr4:55239210-55239229 | MsG0480021213.01.T01:CDS | 55.0% | |
| GGTTCAGTCACTGTGCCTCA+GGG | - | Chr4:55239243-55239262 | MsG0480021213.01.T01:CDS | 55.0% | |
| TTCACCTCCACCACTCACAC+AGG | - | Chr4:55237615-55237634 | MsG0480021213.01.T01:three_prime_UTR | 55.0% | |
| TTCTCCTGTGTGAGTGGTGG+AGG | + | Chr4:55237622-55237641 | None:intergenic | 55.0% | |
| ! | CTTTTCGTGGACTTGCCGGT+CGG | - | Chr4:55239142-55239161 | MsG0480021213.01.T01:CDS | 55.0% |
| GCCAACAGGAGCTAGCCGAC+CGG | + | Chr4:55239160-55239179 | None:intergenic | 65.0% | |
| ! | GCCGGTCGGCTAGCTCCTGT+TGG | - | Chr4:55239156-55239175 | MsG0480021213.01.T01:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr4 | gene | 55237367 | 55241535 | 55237367 | ID=MsG0480021213.01;Name=MsG0480021213.01 |
| Chr4 | mRNA | 55237367 | 55241535 | 55237367 | ID=MsG0480021213.01.T01;Parent=MsG0480021213.01;Name=MsG0480021213.01.T01;_AED=0.49;_eAED=0.49;_QI=57|1|1|1|1|1|8|341|548 |
| Chr4 | exon | 55237367 | 55237866 | 55237367 | ID=MsG0480021213.01.T01:exon:6714;Parent=MsG0480021213.01.T01 |
| Chr4 | exon | 55238133 | 55238216 | 55238133 | ID=MsG0480021213.01.T01:exon:6713;Parent=MsG0480021213.01.T01 |
| Chr4 | exon | 55238313 | 55238469 | 55238313 | ID=MsG0480021213.01.T01:exon:6712;Parent=MsG0480021213.01.T01 |
| Chr4 | exon | 55239082 | 55239347 | 55239082 | ID=MsG0480021213.01.T01:exon:6711;Parent=MsG0480021213.01.T01 |
| Chr4 | exon | 55239516 | 55239788 | 55239516 | ID=MsG0480021213.01.T01:exon:6710;Parent=MsG0480021213.01.T01 |
| Chr4 | exon | 55239945 | 55240056 | 55239945 | ID=MsG0480021213.01.T01:exon:6709;Parent=MsG0480021213.01.T01 |
| Chr4 | exon | 55240142 | 55240361 | 55240142 | ID=MsG0480021213.01.T01:exon:6708;Parent=MsG0480021213.01.T01 |
| Chr4 | exon | 55241103 | 55241535 | 55241103 | ID=MsG0480021213.01.T01:exon:6707;Parent=MsG0480021213.01.T01 |
| Chr4 | five_prime_UTR | 55241479 | 55241535 | 55241479 | ID=MsG0480021213.01.T01:five_prime_utr;Parent=MsG0480021213.01.T01 |
| Chr4 | CDS | 55241103 | 55241478 | 55241103 | ID=MsG0480021213.01.T01:cds;Parent=MsG0480021213.01.T01 |
| Chr4 | CDS | 55240142 | 55240361 | 55240142 | ID=MsG0480021213.01.T01:cds;Parent=MsG0480021213.01.T01 |
| Chr4 | CDS | 55239945 | 55240056 | 55239945 | ID=MsG0480021213.01.T01:cds;Parent=MsG0480021213.01.T01 |
| Chr4 | CDS | 55239516 | 55239788 | 55239516 | ID=MsG0480021213.01.T01:cds;Parent=MsG0480021213.01.T01 |
| Chr4 | CDS | 55239082 | 55239347 | 55239082 | ID=MsG0480021213.01.T01:cds;Parent=MsG0480021213.01.T01 |
| Chr4 | CDS | 55238313 | 55238469 | 55238313 | ID=MsG0480021213.01.T01:cds;Parent=MsG0480021213.01.T01 |
| Chr4 | CDS | 55238133 | 55238216 | 55238133 | ID=MsG0480021213.01.T01:cds;Parent=MsG0480021213.01.T01 |
| Chr4 | CDS | 55237708 | 55237866 | 55237708 | ID=MsG0480021213.01.T01:cds;Parent=MsG0480021213.01.T01 |
| Chr4 | three_prime_UTR | 55237367 | 55237707 | 55237367 | ID=MsG0480021213.01.T01:three_prime_utr;Parent=MsG0480021213.01.T01 |
| Gene Sequence |
| Protein sequence |
