Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280009675.01.T01 | XP_003596200.1 | 95.181 | 249 | 10 | 1 | 1 | 247 | 1 | 249 | 3.45E-172 | 484 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280009675.01.T01 | Q9LDY9 | 62.14 | 243 | 78 | 5 | 2 | 235 | 1 | 238 | 5.49E-97 | 286 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280009675.01.T01 | G7IJA0 | 95.181 | 249 | 10 | 1 | 1 | 247 | 1 | 249 | 1.65e-172 | 484 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048993.01 | MsG0280009675.01 | 0.861279 | 1.147373e-63 | 3.229305e-60 |
| MsG0080049024.01 | MsG0280009675.01 | 0.808376 | 3.192613e-50 | 1.822555e-47 |
| MsG0180000793.01 | MsG0280009675.01 | 0.802493 | 5.464994e-49 | 2.680707e-46 |
| MsG0180001137.01 | MsG0280009675.01 | 0.814738 | 1.321899e-51 | 8.942041e-49 |
| MsG0180001548.01 | MsG0280009675.01 | 0.842672 | 2.241331e-58 | 3.423001e-55 |
| MsG0180001864.01 | MsG0280009675.01 | 0.828099 | 1.085112e-54 | 1.067997e-51 |
| MsG0180002006.01 | MsG0280009675.01 | -0.814424 | 1.551596e-51 | 1.040750e-48 |
| MsG0180003196.01 | MsG0280009675.01 | 0.880960 | 3.569081e-70 | 2.052376e-66 |
| MsG0180003405.01 | MsG0280009675.01 | 0.824000 | 1.022905e-53 | 8.947782e-51 |
| MsG0180003547.01 | MsG0280009675.01 | 0.822859 | 1.890941e-53 | 1.601789e-50 |
| MsG0180003617.01 | MsG0280009675.01 | 0.840077 | 1.080578e-57 | 1.522204e-54 |
| MsG0180003637.01 | MsG0280009675.01 | -0.812270 | 4.612325e-51 | 2.919515e-48 |
| MsG0180003908.01 | MsG0280009675.01 | 0.812364 | 4.401202e-51 | 2.792837e-48 |
| MsG0180004121.01 | MsG0280009675.01 | -0.869295 | 3.446676e-66 | 1.286714e-62 |
| MsG0180004662.01 | MsG0280009675.01 | 0.830750 | 2.462586e-55 | 2.618485e-52 |
| MsG0180004714.01 | MsG0280009675.01 | 0.897856 | 9.371514e-77 | 1.079101e-72 |
| MsG0180004787.01 | MsG0280009675.01 | 0.864896 | 8.743893e-65 | 2.789617e-61 |
| MsG0180004792.01 | MsG0280009675.01 | 0.912531 | 1.751357e-83 | 3.958050e-79 |
| MsG0180005127.01 | MsG0280009675.01 | -0.842576 | 2.376412e-58 | 3.618780e-55 |
| MsG0180005146.01 | MsG0280009675.01 | -0.842672 | 2.240749e-58 | 3.422174e-55 |
| MsG0180005184.01 | MsG0280009675.01 | 0.825127 | 5.552905e-54 | 5.016848e-51 |
| MsG0180005636.01 | MsG0280009675.01 | -0.810197 | 1.299045e-50 | 7.780718e-48 |
| MsG0180005822.01 | MsG0280009675.01 | 0.839389 | 1.631637e-57 | 2.250036e-54 |
| MsG0180005898.01 | MsG0280009675.01 | 0.881038 | 3.344599e-70 | 1.929130e-66 |
| MsG0180006028.01 | MsG0280009675.01 | 0.891606 | 3.407710e-74 | 3.008643e-70 |
| MsG0180006217.01 | MsG0280009675.01 | 0.877131 | 8.035459e-69 | 3.996230e-65 |
| MsG0180006253.01 | MsG0280009675.01 | -0.843092 | 1.733120e-58 | 2.681838e-55 |
| MsG0280006571.01 | MsG0280009675.01 | 0.847588 | 1.051621e-59 | 1.878212e-56 |
| MsG0280007406.01 | MsG0280009675.01 | 0.811972 | 5.356604e-51 | 3.363161e-48 |
| MsG0280007511.01 | MsG0280009675.01 | 0.808458 | 3.067023e-50 | 1.754620e-47 |
| MsG0280007598.01 | MsG0280009675.01 | -0.801994 | 6.922179e-49 | 3.352634e-46 |
| MsG0280007677.01 | MsG0280009675.01 | -0.806450 | 8.178232e-50 | 4.440302e-47 |
| MsG0280009445.01 | MsG0280009675.01 | 0.868399 | 6.719601e-66 | 2.427140e-62 |
| MsG0280009675.01 | MsG0280009699.01 | 0.805013 | 1.638137e-49 | 8.572510e-47 |
| MsG0280009675.01 | MsG0280010621.01 | -0.802409 | 5.688174e-49 | 2.784384e-46 |
| MsG0280009675.01 | MsG0280010728.01 | 0.825309 | 5.029969e-54 | 4.567899e-51 |
| MsG0280009675.01 | MsG0280011218.01 | 0.870660 | 1.233676e-66 | 4.836744e-63 |
| MsG0280009675.01 | MsG0280011269.01 | -0.807331 | 5.325427e-50 | 2.958008e-47 |
| MsG0280009675.01 | MsG0280011271.01 | -0.852848 | 3.526546e-61 | 7.469648e-58 |
| MsG0280009675.01 | MsG0280011362.01 | 0.856937 | 2.294516e-62 | 5.567503e-59 |
| MsG0280009675.01 | MsG0380011693.01 | 0.804587 | 2.011460e-49 | 1.041086e-46 |
| MsG0280009675.01 | MsG0380015456.01 | 0.857217 | 1.897267e-62 | 4.648163e-59 |
| MsG0280009675.01 | MsG0380015557.01 | -0.846816 | 1.712336e-59 | 2.983600e-56 |
| MsG0280009675.01 | MsG0380015711.01 | -0.808789 | 2.605430e-50 | 1.503406e-47 |
| MsG0280009675.01 | MsG0380015738.01 | 0.848180 | 7.222966e-60 | 1.314374e-56 |
| MsG0280009675.01 | MsG0380015744.01 | 0.827239 | 1.746211e-54 | 1.676104e-51 |
| MsG0280009675.01 | MsG0380016861.01 | 0.819713 | 1.005391e-52 | 7.796346e-50 |
| MsG0280009675.01 | MsG0380016997.01 | 0.826749 | 2.286693e-54 | 2.163575e-51 |
| MsG0280009675.01 | MsG0380017162.01 | 0.823922 | 1.067198e-53 | 9.315626e-51 |
| MsG0280009675.01 | MsG0380017200.01 | -0.843252 | 1.571070e-58 | 2.443596e-55 |
| MsG0280009675.01 | MsG0380017411.01 | -0.803000 | 4.296159e-49 | 2.134673e-46 |
| MsG0280009675.01 | MsG0380017427.01 | 0.840115 | 1.055976e-57 | 1.489282e-54 |
| MsG0280009675.01 | MsG0380017436.01 | 0.824069 | 9.855389e-54 | 8.638205e-51 |
| MsG0280009675.01 | MsG0380017666.01 | -0.822565 | 2.212939e-53 | 1.859092e-50 |
| MsG0280009675.01 | MsG0480018337.01 | 0.837651 | 4.582380e-57 | 5.992390e-54 |
| MsG0280009675.01 | MsG0480018338.01 | 0.822252 | 2.616135e-53 | 2.178120e-50 |
| MsG0280009675.01 | MsG0480018569.01 | -0.818565 | 1.834265e-52 | 1.377808e-49 |
| MsG0280009675.01 | MsG0480019812.01 | 0.884493 | 1.829349e-71 | 1.209263e-67 |
| MsG0280009675.01 | MsG0480020139.01 | 0.816110 | 6.545851e-52 | 4.596907e-49 |
| MsG0280009675.01 | MsG0480020448.01 | -0.822807 | 1.944035e-53 | 1.644309e-50 |
| MsG0280009675.01 | MsG0480020473.01 | 0.830504 | 2.830290e-55 | 2.987478e-52 |
| MsG0280009675.01 | MsG0480020596.01 | 0.832913 | 7.207105e-56 | 8.170174e-53 |
| MsG0280009675.01 | MsG0480020797.01 | -0.825046 | 5.801795e-54 | 5.229985e-51 |
| MsG0280009675.01 | MsG0480020938.01 | 0.829657 | 4.553165e-55 | 4.690142e-52 |
| MsG0280009675.01 | MsG0480021059.01 | 0.830905 | 2.256382e-55 | 2.410310e-52 |
| MsG0280009675.01 | MsG0480021124.01 | 0.818775 | 1.643573e-52 | 1.241812e-49 |
| MsG0280009675.01 | MsG0480021213.01 | 0.899134 | 2.675232e-77 | 3.263348e-73 |
| MsG0280009675.01 | MsG0480021226.01 | -0.801869 | 7.347152e-49 | 3.547309e-46 |
| MsG0280009675.01 | MsG0480021497.01 | 0.800992 | 1.110736e-48 | 5.245621e-46 |
| MsG0280009675.01 | MsG0480021967.01 | 0.857418 | 1.654444e-62 | 4.080305e-59 |
| MsG0280009675.01 | MsG0480022113.01 | 0.836572 | 8.649442e-57 | 1.094336e-53 |
| MsG0280009675.01 | MsG0480022154.01 | 0.833309 | 5.741411e-56 | 6.586761e-53 |
| MsG0280009675.01 | MsG0480022242.01 | 0.810347 | 1.205863e-50 | 7.251193e-48 |
| MsG0280009675.01 | MsG0480022244.01 | 0.824541 | 7.632227e-54 | 6.780672e-51 |
| MsG0280009675.01 | MsG0480023067.01 | -0.807615 | 4.634809e-50 | 2.593330e-47 |
| MsG0280009675.01 | MsG0480023103.01 | 0.800510 | 1.393613e-48 | 6.500755e-46 |
| MsG0280009675.01 | MsG0480023454.01 | -0.807346 | 5.287074e-50 | 2.937767e-47 |
| MsG0280009675.01 | MsG0480023466.01 | 0.859397 | 4.254110e-63 | 1.122080e-59 |
| MsG0280009675.01 | MsG0480023495.01 | 0.857055 | 2.117324e-62 | 5.158655e-59 |
| MsG0280009675.01 | MsG0480023851.01 | 0.803962 | 2.714221e-49 | 1.382484e-46 |
| MsG0280009675.01 | MsG0480023987.01 | -0.833941 | 3.993944e-56 | 4.669966e-53 |
| MsG0280009675.01 | MsG0580024193.01 | -0.814379 | 1.587826e-51 | 1.063735e-48 |
| MsG0280009675.01 | MsG0580024471.01 | 0.800067 | 1.714626e-48 | 7.909026e-46 |
| MsG0280009675.01 | MsG0580024872.01 | 0.812690 | 3.734750e-51 | 2.390473e-48 |
| MsG0280009675.01 | MsG0580025252.01 | 0.826381 | 2.798242e-54 | 2.620130e-51 |
| MsG0280009675.01 | MsG0580025565.01 | 0.848781 | 4.924290e-60 | 9.138494e-57 |
| MsG0280009675.01 | MsG0580027183.01 | 0.808700 | 2.722368e-50 | 1.567219e-47 |
| MsG0280009675.01 | MsG0580027189.01 | 0.800160 | 1.641506e-48 | 7.589267e-46 |
| MsG0280009675.01 | MsG0580028302.01 | -0.802326 | 5.916970e-49 | 2.890309e-46 |
| MsG0280009675.01 | MsG0580028495.01 | 0.807122 | 5.897349e-50 | 3.257708e-47 |
| MsG0280009675.01 | MsG0580028603.01 | -0.804128 | 2.506372e-49 | 1.282031e-46 |
| MsG0280009675.01 | MsG0580029682.01 | 0.801193 | 1.010516e-48 | 4.796195e-46 |
| MsG0280009675.01 | MsG0580029751.01 | 0.854950 | 8.749678e-62 | 1.987395e-58 |
| MsG0280009675.01 | MsG0580030063.01 | 0.800608 | 1.330811e-48 | 6.223332e-46 |
| MsG0280009675.01 | MsG0680031449.01 | 0.841772 | 3.879914e-58 | 5.760417e-55 |
| MsG0280009675.01 | MsG0680031829.01 | 0.830646 | 2.612147e-55 | 2.768935e-52 |
| MsG0280009675.01 | MsG0680032245.01 | 0.810247 | 1.267106e-50 | 7.599729e-48 |
| MsG0280009675.01 | MsG0680032769.01 | 0.821335 | 4.265389e-53 | 3.460210e-50 |
| MsG0280009675.01 | MsG0680033852.01 | 0.809802 | 1.580674e-50 | 9.370851e-48 |
| MsG0280009675.01 | MsG0680033884.01 | 0.808850 | 2.528655e-50 | 1.461483e-47 |
| MsG0280009675.01 | MsG0680034131.01 | 0.805440 | 1.333366e-49 | 7.054527e-47 |
| MsG0280009675.01 | MsG0680035344.01 | -0.806055 | 9.905616e-50 | 5.324333e-47 |
| MsG0280009675.01 | MsG0680035664.01 | 0.826119 | 3.230430e-54 | 3.002153e-51 |
| MsG0280009675.01 | MsG0680035665.01 | 0.854897 | 9.064290e-62 | 2.055154e-58 |
| MsG0280009675.01 | MsG0780036008.01 | 0.864442 | 1.212328e-64 | 3.807317e-61 |
| MsG0280009675.01 | MsG0780038399.01 | -0.846245 | 2.450895e-59 | 4.191990e-56 |
| MsG0280009675.01 | MsG0780039431.01 | -0.807129 | 5.878060e-50 | 3.247636e-47 |
| MsG0280009675.01 | MsG0780039955.01 | 0.812532 | 4.042917e-51 | 2.577053e-48 |
| MsG0280009675.01 | MsG0780039986.01 | 0.811724 | 6.067832e-51 | 3.784486e-48 |
| MsG0280009675.01 | MsG0780040105.01 | 0.855062 | 8.117889e-62 | 1.850792e-58 |
| MsG0280009675.01 | MsG0780040154.01 | 0.810222 | 1.283541e-50 | 7.692675e-48 |
| MsG0280009675.01 | MsG0780040214.01 | 0.852633 | 4.060370e-61 | 8.537679e-58 |
| MsG0280009675.01 | MsG0780040236.01 | 0.838441 | 2.871189e-57 | 3.846055e-54 |
| MsG0280009675.01 | MsG0780040560.01 | -0.824232 | 9.022074e-54 | 7.944662e-51 |
| MsG0280009675.01 | MsG0780040640.01 | 0.821985 | 3.017979e-53 | 2.493453e-50 |
| MsG0280009675.01 | MsG0780040670.01 | -0.831453 | 1.654959e-55 | 1.796784e-52 |
| MsG0280009675.01 | MsG0780040684.01 | 0.839797 | 1.277894e-57 | 1.784349e-54 |
| MsG0280009675.01 | MsG0780040889.01 | -0.828861 | 7.103451e-55 | 7.147255e-52 |
| MsG0280009675.01 | MsG0780040892.01 | 0.800039 | 1.737836e-48 | 8.010084e-46 |
| MsG0280009675.01 | MsG0780040965.01 | 0.872522 | 2.982472e-67 | 1.252071e-63 |
| MsG0280009675.01 | MsG0780041331.01 | 0.842842 | 2.019299e-58 | 3.100508e-55 |
| MsG0280009675.01 | MsG0780041361.01 | 0.829432 | 5.165616e-55 | 5.285934e-52 |
| MsG0280009675.01 | MsG0780041403.01 | -0.809956 | 1.464604e-50 | 8.717851e-48 |
| MsG0280009675.01 | MsG0780041442.01 | 0.864618 | 1.067805e-64 | 3.374393e-61 |
| MsG0280009675.01 | MsG0880041847.01 | 0.897445 | 1.396597e-76 | 1.578095e-72 |
| MsG0280009675.01 | MsG0880042019.01 | 0.803471 | 3.431449e-49 | 1.725847e-46 |
| MsG0280009675.01 | MsG0880042512.01 | 0.816036 | 6.802142e-52 | 4.767332e-49 |
| MsG0280009675.01 | MsG0880042849.01 | -0.805119 | 1.556752e-49 | 8.168983e-47 |
| MsG0280009675.01 | MsG0880043021.01 | 0.815806 | 7.655814e-52 | 5.331796e-49 |
| MsG0280009675.01 | MsG0880043024.01 | 0.803909 | 2.783643e-49 | 1.415955e-46 |
| MsG0280009675.01 | MsG0880043056.01 | 0.873982 | 9.637075e-68 | 4.265026e-64 |
| MsG0280009675.01 | MsG0880043476.01 | 0.856440 | 3.212448e-62 | 7.668548e-59 |
| MsG0280009675.01 | MsG0880044317.01 | 0.817519 | 3.162657e-52 | 2.308345e-49 |
| MsG0280009675.01 | MsG0880044548.01 | 0.801887 | 7.281801e-49 | 3.517473e-46 |
| MsG0280009675.01 | MsG0880044834.01 | 0.827932 | 1.190593e-54 | 1.166043e-51 |
| MsG0280009675.01 | MsG0880045703.01 | 0.852882 | 3.449110e-61 | 7.312942e-58 |
| MsG0280009675.01 | MsG0880045854.01 | -0.806394 | 8.405270e-50 | 4.556835e-47 |
| MsG0280009675.01 | MsG0880046324.01 | 0.814011 | 1.914049e-51 | 1.269549e-48 |
| MsG0280009675.01 | MsG0880046408.01 | 0.804672 | 1.930547e-49 | 1.001418e-46 |
| MsG0280009675.01 | MsG0880046838.01 | 0.849467 | 3.173583e-60 | 6.021594e-57 |
| MsG0280009675.01 | MsG0880047207.01 | 0.879112 | 1.624927e-69 | 8.702299e-66 |
| MsG0280009675.01 | MsG0880047312.01 | -0.827836 | 1.255665e-54 | 1.226261e-51 |
| MsG0280009675.01 | MsG0880047435.01 | 0.830748 | 2.466385e-55 | 2.622299e-52 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280009675.01.T01 | MTR_2g069470 | 95.181 | 249 | 10 | 1 | 1 | 247 | 1 | 249 | 4.18e-176 | 484 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280009675.01.T01 | AT3G12930 | 62.140 | 243 | 78 | 5 | 2 | 235 | 1 | 238 | 5.60e-98 | 286 |
Find 86 sgRNAs with CRISPR-Local
Find 204 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACAAAGAGCTTTCTATAATT+TGG | 0.135819 | 2:+56105125 | MsG0280009675.01.T01:CDS |
| GAAACTGGTGAAAACCTTTC+TGG | 0.157336 | 2:-56102724 | None:intergenic |
| CATACCCGATAGCATCAATT+TGG | 0.241247 | 2:-56104479 | None:intergenic |
| TTGTGAAGCCACTTGTTTAC+TGG | 0.250083 | 2:+56104418 | MsG0280009675.01.T01:CDS |
| TCTCTGCACTTGCAGGCTTT+TGG | 0.287492 | 2:-56104111 | None:intergenic |
| GATGAATTATTAAATAACTA+TGG | 0.298468 | 2:+56104064 | MsG0280009675.01.T01:CDS |
| TCTAAGAAAACTGTAATAGA+TGG | 0.306550 | 2:+56105458 | MsG0280009675.01.T01:three_prime_UTR |
| TAATGTAAACAAACTTAAAT+TGG | 0.314454 | 2:-56105287 | None:intergenic |
| CTTAAATTGGCAGTGATTAT+CGG | 0.316328 | 2:-56105274 | None:intergenic |
| TCGTCAATCTCTGCACTTGC+AGG | 0.326105 | 2:-56104118 | None:intergenic |
| GGTCACCTTCTCCGGCGAAA+TGG | 0.354058 | 2:+56102671 | MsG0280009675.01.T01:CDS |
| ATACCCGATAGCATCAATTT+GGG | 0.374377 | 2:-56104478 | None:intergenic |
| GTCACCTTCTCCGGCGAAAT+GGG | 0.375268 | 2:+56102672 | MsG0280009675.01.T01:CDS |
| TTGTTATCAGCTTACATGAT+AGG | 0.394608 | 2:-56104153 | None:intergenic |
| AGCCAATGACAATTCTTTCT+CGG | 0.397509 | 2:+56102833 | MsG0280009675.01.T01:CDS |
| GACCGGGCTGAAAAGAAATA+TGG | 0.400591 | 2:+56104619 | MsG0280009675.01.T01:CDS |
| AAACTGGTGAAAACCTTTCT+GGG | 0.402876 | 2:-56102723 | None:intergenic |
| AGTGGAGGCTCATTCCATTC+TGG | 0.406595 | 2:+56105365 | MsG0280009675.01.T01:three_prime_UTR |
| CTCTTCTTCAAAACCCAGAA+AGG | 0.412507 | 2:+56102710 | MsG0280009675.01.T01:CDS |
| ATGACTTACCGAAGTCCAAC+AGG | 0.413851 | 2:-56104681 | None:intergenic |
| GCATCTAGTTGCTGTGGAAC+TGG | 0.415804 | 2:+56104350 | MsG0280009675.01.T01:intron |
| CAGTTGATTGATTGTTAGCT+TGG | 0.419378 | 2:+56105245 | MsG0280009675.01.T01:exon |
| ATCGCTCCGGTCACCTTCTC+CGG | 0.425960 | 2:+56102663 | MsG0280009675.01.T01:CDS |
| CACGGTTGCAAGTGAGGTTA+AGG | 0.426301 | 2:+56104374 | MsG0280009675.01.T01:CDS |
| AAAACTGTAATAGATGGGTT+TGG | 0.432049 | 2:+56105464 | MsG0280009675.01.T01:three_prime_UTR |
| TCCAACAGGGTCCATGAGTT+GGG | 0.438380 | 2:-56104667 | None:intergenic |
| TACCGAGAAAGAATTGTCAT+TGG | 0.438957 | 2:-56102835 | None:intergenic |
| CGATGGCTCCGGCGAGGGAT+AGG | 0.447540 | 2:-56102644 | None:intergenic |
| TGTGCTGAATTGTTTACATC+AGG | 0.448051 | 2:-56105311 | None:intergenic |
| AATTATAGAAAGCTCTTTGT+GGG | 0.448717 | 2:-56105122 | None:intergenic |
| TTGGATAAGCACGGAGGGAA+GGG | 0.471268 | 2:+56105483 | MsG0280009675.01.T01:three_prime_UTR |
| CGTCCCCAAATTGATGCTAT+CGG | 0.492807 | 2:+56104474 | MsG0280009675.01.T01:CDS |
| GTCCAACAGGGTCCATGAGT+TGG | 0.493640 | 2:-56104668 | None:intergenic |
| GTCCCCAAATTGATGCTATC+GGG | 0.500874 | 2:+56104475 | MsG0280009675.01.T01:CDS |
| TTTGGATAAGCACGGAGGGA+AGG | 0.506458 | 2:+56105482 | MsG0280009675.01.T01:three_prime_UTR |
| GGTTAAGGCAGGGGATATAA+AGG | 0.507409 | 2:+56104389 | MsG0280009675.01.T01:CDS |
| AAATATGGTAAAATTCCAAA+TGG | 0.510572 | 2:+56104634 | MsG0280009675.01.T01:CDS |
| TAGGCTCCCTCATTGCGAAA+TGG | 0.511514 | 2:-56105201 | None:intergenic |
| AAATTATAGAAAGCTCTTTG+TGG | 0.514327 | 2:-56105123 | None:intergenic |
| ATGACCCATTTCGCCGGAGA+AGG | 0.518592 | 2:-56102676 | None:intergenic |
| AAGATGCTGTGGCGATGTAA+AGG | 0.518838 | 2:-56102762 | None:intergenic |
| ATGAATTATTAAATAACTAT+GGG | 0.519880 | 2:+56104065 | MsG0280009675.01.T01:CDS |
| TGGATAAGCACGGAGGGAAG+GGG | 0.522742 | 2:+56105484 | MsG0280009675.01.T01:three_prime_UTR |
| TCCACTCTCCTATCCCTCGC+CGG | 0.530113 | 2:+56102636 | MsG0280009675.01.T01:CDS |
| CTAAGAAAACTGTAATAGAT+GGG | 0.532894 | 2:+56105459 | MsG0280009675.01.T01:three_prime_UTR |
| CGGAGCGATGGCTCCGGCGA+GGG | 0.533421 | 2:-56102649 | None:intergenic |
| TTAGGTCGAGAATTAGAGAC+CGG | 0.535827 | 2:+56104602 | MsG0280009675.01.T01:intron |
| ATTTCGCCGGAGAAGGTGAC+CGG | 0.541431 | 2:-56102669 | None:intergenic |
| GGTGACCGGAGCGATGGCTC+CGG | 0.541587 | 2:-56102655 | None:intergenic |
| GTTGCAAGTGAGGTTAAGGC+AGG | 0.541952 | 2:+56104378 | MsG0280009675.01.T01:CDS |
| ACCCAACTCATGGACCCTGT+TGG | 0.542471 | 2:+56104666 | MsG0280009675.01.T01:CDS |
| GCATCTTGAATTTGAAGAGA+AGG | 0.544142 | 2:+56102778 | MsG0280009675.01.T01:CDS |
| TTTCGCAATGAGGGAGCCTA+CGG | 0.547079 | 2:+56105204 | MsG0280009675.01.T01:CDS |
| AGTTGCTGTGGAACTGGCCA+CGG | 0.547501 | 2:+56104356 | MsG0280009675.01.T01:intron |
| GAGACTCAAAACCCAACTCA+TGG | 0.554759 | 2:+56104656 | MsG0280009675.01.T01:CDS |
| TGCAAGTGAGGTTAAGGCAG+GGG | 0.558585 | 2:+56104380 | MsG0280009675.01.T01:CDS |
| CAACCACCATTTCGCAATGA+GGG | 0.563409 | 2:+56105195 | MsG0280009675.01.T01:CDS |
| ACTGGCCACGGTTGCAAGTG+AGG | 0.566137 | 2:+56104368 | MsG0280009675.01.T01:CDS |
| TCATGGACCCTGTTGGACTT+CGG | 0.575861 | 2:+56104673 | MsG0280009675.01.T01:CDS |
| TTGGGGATGACCCATTTCGC+CGG | 0.581448 | 2:-56102682 | None:intergenic |
| GGAGAAGGTGACCGGAGCGA+TGG | 0.584683 | 2:-56102661 | None:intergenic |
| CTTAACCTCACTTGCAACCG+TGG | 0.590346 | 2:-56104373 | None:intergenic |
| TGGGTTTGGATAAGCACGGA+GGG | 0.594629 | 2:+56105478 | MsG0280009675.01.T01:three_prime_UTR |
| AATCGAGTCCAGTAAACAAG+TGG | 0.595838 | 2:-56104426 | None:intergenic |
| CCGGAGCGATGGCTCCGGCG+AGG | 0.597203 | 2:-56102650 | None:intergenic |
| TCTTCAAATTCAAGATGCTG+TGG | 0.599629 | 2:-56102773 | None:intergenic |
| GCTCCCTCATTGCGAAATGG+TGG | 0.600231 | 2:-56105198 | None:intergenic |
| CCTCGCCGGAGCCATCGCTC+CGG | 0.600870 | 2:+56102650 | MsG0280009675.01.T01:CDS |
| TCAACCACCATTTCGCAATG+AGG | 0.606311 | 2:+56105194 | MsG0280009675.01.T01:CDS |
| TTTGAAGAAGAGTTGGTTTG+GGG | 0.609746 | 2:-56102699 | None:intergenic |
| TTATAGAAAGCTCTTTGTGG+GGG | 0.611682 | 2:-56105120 | None:intergenic |
| TTGCAAGTGAGGTTAAGGCA+GGG | 0.616058 | 2:+56104379 | MsG0280009675.01.T01:CDS |
| TGTTGTGCATCTAGTTGCTG+TGG | 0.619390 | 2:+56104344 | MsG0280009675.01.T01:intron |
| ATTATAGAAAGCTCTTTGTG+GGG | 0.619735 | 2:-56105121 | None:intergenic |
| AGGCTCATTCCATTCTGGAA+AGG | 0.624965 | 2:+56105370 | MsG0280009675.01.T01:three_prime_UTR |
| CACACAAGCATAGTCTTGTG+TGG | 0.630462 | 2:-56105339 | None:intergenic |
| GACTATGCTTGTGTGATGAG+TGG | 0.643157 | 2:+56105347 | MsG0280009675.01.T01:three_prime_UTR |
| AGGGATAGGAGAGTGGAAGA+CGG | 0.644410 | 2:-56102630 | None:intergenic |
| TACCCGATAGCATCAATTTG+GGG | 0.655032 | 2:-56104477 | None:intergenic |
| TCCGGCGAGGGATAGGAGAG+TGG | 0.665115 | 2:-56102637 | None:intergenic |
| TATGCTTGTGTGATGAGTGG+AGG | 0.665580 | 2:+56105350 | MsG0280009675.01.T01:three_prime_UTR |
| TAGGTCGAGAATTAGAGACC+GGG | 0.675536 | 2:+56104603 | MsG0280009675.01.T01:intron |
| TGCATCATCTGAGAAACCGT+AGG | 0.677693 | 2:-56105220 | None:intergenic |
| TGACTTACCGAAGTCCAACA+GGG | 0.707635 | 2:-56104680 | None:intergenic |
| TAGATGGGTTTGGATAAGCA+CGG | 0.708611 | 2:+56105474 | MsG0280009675.01.T01:three_prime_UTR |
| ATGGGTTTGGATAAGCACGG+AGG | 0.760565 | 2:+56105477 | MsG0280009675.01.T01:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATGAATTATTAAATAACTAT+GGG | + | Chr2:56104065-56104084 | MsG0280009675.01.T01:CDS | 10.0% |
| !! | TTTAATGTTTATACATTATT+TGG | + | Chr2:56103359-56103378 | MsG0280009675.01.T01:intron | 10.0% |
| !!! | ATTATTTAAGTTATTATTAC+CGG | + | Chr2:56103115-56103134 | MsG0280009675.01.T01:intron | 10.0% |
| !! | AAAATATGAATACATAACAA+TGG | - | Chr2:56103248-56103267 | None:intergenic | 15.0% |
| !! | ATGAATTTATATAATCACAA+TGG | + | Chr2:56103904-56103923 | MsG0280009675.01.T01:intron | 15.0% |
| !! | GATGAATTATTAAATAACTA+TGG | + | Chr2:56104064-56104083 | MsG0280009675.01.T01:CDS | 15.0% |
| !! | TAAATAATTGAATGTAAACA+AGG | - | Chr2:56103103-56103122 | None:intergenic | 15.0% |
| !! | TAATGTAAACAAACTTAAAT+TGG | - | Chr2:56105290-56105309 | None:intergenic | 15.0% |
| !!! | ATTGTTTTTATTCATCAAAT+TGG | + | Chr2:56105532-56105551 | MsG0280009675.01.T01:three_prime_UTR | 15.0% |
| !! | AAATATGGTAAAATTCCAAA+TGG | + | Chr2:56104634-56104653 | MsG0280009675.01.T01:CDS | 20.0% |
| !! | AATATATAAAGATCAATGAC+AGG | - | Chr2:56104508-56104527 | None:intergenic | 20.0% |
| !! | TAAGAATCAACATTAAACAA+AGG | - | Chr2:56103795-56103814 | None:intergenic | 20.0% |
| !! | TGTAAAAAGAAATGTAAACA+AGG | - | Chr2:56104203-56104222 | None:intergenic | 20.0% |
| !!! | TAACAAACTGTATAATTTTC+AGG | + | Chr2:56104012-56104031 | MsG0280009675.01.T01:intron | 20.0% |
| !!! | TATAATTTGGAAGAGTTTTA+TGG | + | Chr2:56105138-56105157 | MsG0280009675.01.T01:CDS | 20.0% |
| !!! | TTTATGTTGATTGATTTAGA+AGG | - | Chr2:56104911-56104930 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTTCTTTGCTCAA+AGG | + | Chr2:56104545-56104564 | MsG0280009675.01.T01:intron | 20.0% |
| ! | AAATAGCGTAACTACTTTAA+AGG | - | Chr2:56103511-56103530 | None:intergenic | 25.0% |
| ! | AAATTATAGAAAGCTCTTTG+TGG | - | Chr2:56105126-56105145 | None:intergenic | 25.0% |
| ! | AATAGCGTAACTACTTTAAA+GGG | - | Chr2:56103510-56103529 | None:intergenic | 25.0% |
| ! | AATTATAGAAAGCTCTTTGT+GGG | - | Chr2:56105125-56105144 | None:intergenic | 25.0% |
| ! | ACAAAGAGCTTTCTATAATT+TGG | + | Chr2:56105125-56105144 | MsG0280009675.01.T01:CDS | 25.0% |
| ! | AGATAAGAGTTTATAAAGAG+AGG | + | Chr2:56103572-56103591 | MsG0280009675.01.T01:intron | 25.0% |
| ! | ATAAAATGCAGACAATTAGA+GGG | - | Chr2:56104724-56104743 | None:intergenic | 25.0% |
| ! | CTAAGAAAACTGTAATAGAT+GGG | + | Chr2:56105459-56105478 | MsG0280009675.01.T01:three_prime_UTR | 25.0% |
| ! | CTTCTGATTATGTCAAATAT+AGG | - | Chr2:56104959-56104978 | None:intergenic | 25.0% |
| ! | GACTAAAACAAATACGTAAT+AGG | - | Chr2:56103862-56103881 | None:intergenic | 25.0% |
| ! | GATTCAGAATAAGATGTTTA+AGG | + | Chr2:56103305-56103324 | MsG0280009675.01.T01:intron | 25.0% |
| ! | GTAAAATGTTAACTGAGATA+AGG | + | Chr2:56103411-56103430 | MsG0280009675.01.T01:intron | 25.0% |
| ! | TACAAGAAAAACAACTACAT+AGG | - | Chr2:56103219-56103238 | None:intergenic | 25.0% |
| ! | TATAAAATGCAGACAATTAG+AGG | - | Chr2:56104725-56104744 | None:intergenic | 25.0% |
| ! | TATTGCAACATAAATTGCAT+CGG | + | Chr2:56104981-56105000 | MsG0280009675.01.T01:intron | 25.0% |
| ! | TCTAAGAAAACTGTAATAGA+TGG | + | Chr2:56105458-56105477 | MsG0280009675.01.T01:three_prime_UTR | 25.0% |
| !! | AATGAGTTCAGTTTAGATTT+TGG | + | Chr2:56102910-56102929 | MsG0280009675.01.T01:intron | 25.0% |
| !! | ATACTTTTGAACTTTGCTTT+CGG | + | Chr2:56102804-56102823 | MsG0280009675.01.T01:CDS | 25.0% |
| !! | ATCTATTACAGTTTTCTTAG+AGG | - | Chr2:56105459-56105478 | None:intergenic | 25.0% |
| !! | ATGAGTTCAGTTTAGATTTT+GGG | + | Chr2:56102911-56102930 | MsG0280009675.01.T01:intron | 25.0% |
| !! | TTATGTCAAATATAGGCTTT+TGG | - | Chr2:56104952-56104971 | None:intergenic | 25.0% |
| !!! | AGTTTTGGTAGTTAAAATTC+AGG | - | Chr2:56103822-56103841 | None:intergenic | 25.0% |
| !!! | TGATTTAGAAGGTTTTGATA+GGG | - | Chr2:56104900-56104919 | None:intergenic | 25.0% |
| !!! | TTGATTTAGAAGGTTTTGAT+AGG | - | Chr2:56104901-56104920 | None:intergenic | 25.0% |
| AAACAATCATAAGATGAACC+TGG | - | Chr2:56105063-56105082 | None:intergenic | 30.0% | |
| AAATAACCGAACCATAGTAA+AGG | - | Chr2:56103453-56103472 | None:intergenic | 30.0% | |
| AATGTTAACTGAGATAAGGT+TGG | + | Chr2:56103415-56103434 | MsG0280009675.01.T01:intron | 30.0% | |
| ACATGTATGTGTCTTATATC+AGG | + | Chr2:56104234-56104253 | MsG0280009675.01.T01:intron | 30.0% | |
| ATAGTCCTATCTTTAAACGT+GGG | - | Chr2:56103552-56103571 | None:intergenic | 30.0% | |
| ATGCAATTTAGAAAACCTTG+AGG | + | Chr2:56102989-56103008 | MsG0280009675.01.T01:intron | 30.0% | |
| ATTATAGAAAGCTCTTTGTG+GGG | - | Chr2:56105124-56105143 | None:intergenic | 30.0% | |
| CAACTACTCTATAAGATTGA+AGG | + | Chr2:56103015-56103034 | MsG0280009675.01.T01:intron | 30.0% | |
| CTTAAATTGGCAGTGATTAT+CGG | - | Chr2:56105277-56105296 | None:intergenic | 30.0% | |
| TAACACCTAAACATAAACAC+CGG | - | Chr2:56103137-56103156 | None:intergenic | 30.0% | |
| TACCAAACAAGATACAAGAT+AGG | - | Chr2:56105015-56105034 | None:intergenic | 30.0% | |
| TATAGTCCTATCTTTAAACG+TGG | - | Chr2:56103553-56103572 | None:intergenic | 30.0% | |
| TATTACCGGTGTTTATGTTT+AGG | + | Chr2:56103129-56103148 | MsG0280009675.01.T01:intron | 30.0% | |
| TGATTGGCAATTCTCATTAA+GGG | + | Chr2:56103981-56104000 | MsG0280009675.01.T01:intron | 30.0% | |
| TTAACTACCAAAACTGAGAA+TGG | + | Chr2:56103827-56103846 | MsG0280009675.01.T01:intron | 30.0% | |
| TTAATGAGAATTGCCAATCA+CGG | - | Chr2:56103981-56104000 | None:intergenic | 30.0% | |
| TTAGGTGTTAATGTTGTGTT+CGG | + | Chr2:56103147-56103166 | MsG0280009675.01.T01:intron | 30.0% | |
| TTGTTATCAGCTTACATGAT+AGG | - | Chr2:56104156-56104175 | None:intergenic | 30.0% | |
| ! | AAAACTGTAATAGATGGGTT+TGG | + | Chr2:56105464-56105483 | MsG0280009675.01.T01:three_prime_UTR | 30.0% |
| ! | TACTTTAAAGGGCTCAAATT+GGG | - | Chr2:56103499-56103518 | None:intergenic | 30.0% |
| ! | TATCATTTTCCTTTCCAGAA+TGG | - | Chr2:56105382-56105401 | None:intergenic | 30.0% |
| ! | TATGATTGTTTCTTGATCAC+AGG | + | Chr2:56105072-56105091 | MsG0280009675.01.T01:intron | 30.0% |
| ! | TATTTGGATGTTGACTATAG+AGG | + | Chr2:56103375-56103394 | MsG0280009675.01.T01:intron | 30.0% |
| !! | AATGGTGGTTGATTTTCAAA+AGG | - | Chr2:56105186-56105205 | None:intergenic | 30.0% |
| !! | CTGTATAATTTTCAGGATGT+AGG | + | Chr2:56104019-56104038 | MsG0280009675.01.T01:intron | 30.0% |
| !! | GTTTTATGGTAATGCAACAT+CGG | + | Chr2:56105152-56105171 | MsG0280009675.01.T01:CDS | 30.0% |
| !! | TTTTGAAGAAGAGTTGGTTT+GGG | - | Chr2:56102703-56102722 | None:intergenic | 30.0% |
| !!! | AGTTTAGATTTTGGGTTCTA+TGG | + | Chr2:56102919-56102938 | MsG0280009675.01.T01:intron | 30.0% |
| !!! | GGGTTTGGTTTTTAAAACAT+TGG | + | Chr2:56103683-56103702 | MsG0280009675.01.T01:intron | 30.0% |
| !!! | TTACTATGGTTCGGTTATTT+TGG | + | Chr2:56103453-56103472 | MsG0280009675.01.T01:intron | 30.0% |
| AAACTGGTGAAAACCTTTCT+GGG | - | Chr2:56102726-56102745 | None:intergenic | 35.0% | |
| AAGAGGTTAGAATCATGTTG+AGG | - | Chr2:56104874-56104893 | None:intergenic | 35.0% | |
| ACAATTGCTAGACACTAAAG+AGG | - | Chr2:56103747-56103766 | None:intergenic | 35.0% | |
| AGCCAATGACAATTCTTTCT+CGG | + | Chr2:56102833-56102852 | MsG0280009675.01.T01:CDS | 35.0% | |
| ATAATCAGAAGCAAAGATGC+AGG | + | Chr2:56104845-56104864 | MsG0280009675.01.T01:intron | 35.0% | |
| ATACCCGATAGCATCAATTT+GGG | - | Chr2:56104481-56104500 | None:intergenic | 35.0% | |
| CAGTTGATTGATTGTTAGCT+TGG | + | Chr2:56105245-56105264 | MsG0280009675.01.T01:exon | 35.0% | |
| GCATCTTGAATTTGAAGAGA+AGG | + | Chr2:56102778-56102797 | MsG0280009675.01.T01:CDS | 35.0% | |
| GTCCTATCTTGTATCTTGTT+TGG | + | Chr2:56105010-56105029 | MsG0280009675.01.T01:intron | 35.0% | |
| GTGATTGGCAATTCTCATTA+AGG | + | Chr2:56103980-56103999 | MsG0280009675.01.T01:intron | 35.0% | |
| TACCGAGAAAGAATTGTCAT+TGG | - | Chr2:56102838-56102857 | None:intergenic | 35.0% | |
| TATCTTTAAACGTGGGACTT+GGG | - | Chr2:56103545-56103564 | None:intergenic | 35.0% | |
| TCAGACTGTATTCAGAATCA+CGG | - | Chr2:56105039-56105058 | None:intergenic | 35.0% | |
| TCTAGAAGTTATGTCTTTGC+TGG | - | Chr2:56104797-56104816 | None:intergenic | 35.0% | |
| TCTTCAAATTCAAGATGCTG+TGG | - | Chr2:56102776-56102795 | None:intergenic | 35.0% | |
| TGTGCTGAATTGTTTACATC+AGG | - | Chr2:56105314-56105333 | None:intergenic | 35.0% | |
| TTATAGAAAGCTCTTTGTGG+GGG | - | Chr2:56105123-56105142 | None:intergenic | 35.0% | |
| TTTGTGGGGGAAGAAATAAA+TGG | - | Chr2:56105110-56105129 | None:intergenic | 35.0% | |
| ! | AAGTGACTTTTTGCAGAAAC+TGG | - | Chr2:56102742-56102761 | None:intergenic | 35.0% |
| ! | CTACTTTAAAGGGCTCAAAT+TGG | - | Chr2:56103500-56103519 | None:intergenic | 35.0% |
| ! | CTAGATTCCATTCTCAGTTT+TGG | - | Chr2:56103837-56103856 | None:intergenic | 35.0% |
| ! | TACCATATTTCTTTTCAGCC+CGG | - | Chr2:56104624-56104643 | None:intergenic | 35.0% |
| !! | TTTGAAGAAGAGTTGGTTTG+GGG | - | Chr2:56102702-56102721 | None:intergenic | 35.0% |
| !!! | CAAATATAGGCTTTTGGAAC+TGG | - | Chr2:56104946-56104965 | None:intergenic | 35.0% |
| !!! | GTTTTGAAGAAGAGTTGGTT+TGG | - | Chr2:56102704-56102723 | None:intergenic | 35.0% |
| !!! | TATTTTGGCAGTTTGATCAG+TGG | + | Chr2:56103468-56103487 | MsG0280009675.01.T01:intron | 35.0% |
| AAGGGGAAAAAGTTGTGGTT+TGG | - | Chr2:56103719-56103738 | None:intergenic | 40.0% | |
| AATCGAGTCCAGTAAACAAG+TGG | - | Chr2:56104429-56104448 | None:intergenic | 40.0% | |
| ACACTAAAGAGGAGATGAAG+GGG | - | Chr2:56103736-56103755 | None:intergenic | 40.0% | |
| AGACACTAAAGAGGAGATGA+AGG | - | Chr2:56103738-56103757 | None:intergenic | 40.0% | |
| AGATGAAGGGGAAAAAGTTG+TGG | - | Chr2:56103724-56103743 | None:intergenic | 40.0% | |
| AGGGGAAAAAGTTGTGGTTT+GGG | - | Chr2:56103718-56103737 | None:intergenic | 40.0% | |
| AGTGCAATGGGAAACTTCAA+TGG | - | Chr2:56104755-56104774 | None:intergenic | 40.0% | |
| ATAGAGTAGTTGTCTCCTCA+AGG | - | Chr2:56103007-56103026 | None:intergenic | 40.0% | |
| CAAATTGATGCTATCGGGTA+TGG | + | Chr2:56104480-56104499 | MsG0280009675.01.T01:intron | 40.0% | |
| CAAGTCCCACGTTTAAAGAT+AGG | + | Chr2:56103544-56103563 | MsG0280009675.01.T01:intron | 40.0% | |
| CATACCCGATAGCATCAATT+TGG | - | Chr2:56104482-56104501 | None:intergenic | 40.0% | |
| CCTTACAAAACCAGCTTGTA+AGG | - | Chr2:56103607-56103626 | None:intergenic | 40.0% | |
| CTATCTTTAAACGTGGGACT+TGG | - | Chr2:56103546-56103565 | None:intergenic | 40.0% | |
| CTCTTCTTCAAAACCCAGAA+AGG | + | Chr2:56102710-56102729 | MsG0280009675.01.T01:CDS | 40.0% | |
| GAAACTGGTGAAAACCTTTC+TGG | - | Chr2:56102727-56102746 | None:intergenic | 40.0% | |
| GACACTAAAGAGGAGATGAA+GGG | - | Chr2:56103737-56103756 | None:intergenic | 40.0% | |
| TACCCGATAGCATCAATTTG+GGG | - | Chr2:56104480-56104499 | None:intergenic | 40.0% | |
| TGGAGCGTAACGTTGAAATT+GGG | - | Chr2:56103641-56103660 | None:intergenic | 40.0% | |
| TTAGGTCGAGAATTAGAGAC+CGG | + | Chr2:56104602-56104621 | MsG0280009675.01.T01:intron | 40.0% | |
| TTCTGAATACAGTCTGATCC+AGG | + | Chr2:56105042-56105061 | MsG0280009675.01.T01:intron | 40.0% | |
| TTGTGAAGCCACTTGTTTAC+TGG | + | Chr2:56104418-56104437 | MsG0280009675.01.T01:CDS | 40.0% | |
| ! | AAGACGGTATCATTTTGTCG+CGG | - | Chr2:56102617-56102636 | None:intergenic | 40.0% |
| ! | TAGATGGGTTTGGATAAGCA+CGG | + | Chr2:56105474-56105493 | MsG0280009675.01.T01:three_prime_UTR | 40.0% |
| !! | AGGTTTTGATAGGGACAAAG+AGG | - | Chr2:56104891-56104910 | None:intergenic | 40.0% |
| !!! | CCTTACAAGCTGGTTTTGTA+AGG | + | Chr2:56103604-56103623 | MsG0280009675.01.T01:intron | 40.0% |
| !!! | TCTGGGTTTTGAAGAAGAGT+TGG | - | Chr2:56102709-56102728 | None:intergenic | 40.0% |
| !!! | TTGGGTTTTGAGTCTCCATT+TGG | - | Chr2:56104652-56104671 | None:intergenic | 40.0% |
| AAGATGCTGTGGCGATGTAA+AGG | - | Chr2:56102765-56102784 | None:intergenic | 45.0% | |
| ACCATAGTAAAGGCCACGAT+CGG | - | Chr2:56103443-56103462 | None:intergenic | 45.0% | |
| AGTGCTTCATAGTTCACAGG+AGG | + | Chr2:56103184-56103203 | MsG0280009675.01.T01:intron | 45.0% | |
| ATCTCTCACTGGTGTGTTGT+CGG | + | Chr2:56103662-56103681 | MsG0280009675.01.T01:intron | 45.0% | |
| ATGACTTACCGAAGTCCAAC+AGG | - | Chr2:56104684-56104703 | None:intergenic | 45.0% | |
| CAAAACCAGCTTGTAAGGTG+TGG | - | Chr2:56103602-56103621 | None:intergenic | 45.0% | |
| CAACCACCATTTCGCAATGA+GGG | + | Chr2:56105195-56105214 | MsG0280009675.01.T01:CDS | 45.0% | |
| CGTCCCCAAATTGATGCTAT+CGG | + | Chr2:56104474-56104493 | MsG0280009675.01.T01:CDS | 45.0% | |
| CTGGAGCGTAACGTTGAAAT+TGG | - | Chr2:56103642-56103661 | None:intergenic | 45.0% | |
| GACCGGGCTGAAAAGAAATA+TGG | + | Chr2:56104619-56104638 | MsG0280009675.01.T01:CDS | 45.0% | |
| GACTATGCTTGTGTGATGAG+TGG | + | Chr2:56105347-56105366 | MsG0280009675.01.T01:three_prime_UTR | 45.0% | |
| GAGACTCAAAACCCAACTCA+TGG | + | Chr2:56104656-56104675 | MsG0280009675.01.T01:CDS | 45.0% | |
| GCTAGTGCTTCATAGTTCAC+AGG | + | Chr2:56103181-56103200 | MsG0280009675.01.T01:intron | 45.0% | |
| GGTTAAGGCAGGGGATATAA+AGG | + | Chr2:56104389-56104408 | MsG0280009675.01.T01:CDS | 45.0% | |
| GTCCCCAAATTGATGCTATC+GGG | + | Chr2:56104475-56104494 | MsG0280009675.01.T01:CDS | 45.0% | |
| TAGGTCGAGAATTAGAGACC+GGG | + | Chr2:56104603-56104622 | MsG0280009675.01.T01:intron | 45.0% | |
| TATGCTTGTGTGATGAGTGG+AGG | + | Chr2:56105350-56105369 | MsG0280009675.01.T01:three_prime_UTR | 45.0% | |
| TCAACCACCATTTCGCAATG+AGG | + | Chr2:56105194-56105213 | MsG0280009675.01.T01:CDS | 45.0% | |
| TCGTGGCCTTTACTATGGTT+CGG | + | Chr2:56103444-56103463 | MsG0280009675.01.T01:intron | 45.0% | |
| TGACTTACCGAAGTCCAACA+GGG | - | Chr2:56104683-56104702 | None:intergenic | 45.0% | |
| TGCATCATCTGAGAAACCGT+AGG | - | Chr2:56105223-56105242 | None:intergenic | 45.0% | |
| TGTTGTGCATCTAGTTGCTG+TGG | + | Chr2:56104344-56104363 | MsG0280009675.01.T01:intron | 45.0% | |
| TTGCAAGTGAGGTTAAGGCA+GGG | + | Chr2:56104379-56104398 | MsG0280009675.01.T01:CDS | 45.0% | |
| ! | AGGCTCATTCCATTCTGGAA+AGG | + | Chr2:56105370-56105389 | MsG0280009675.01.T01:three_prime_UTR | 45.0% |
| ! | GCCTCTTCTAGAAGTGCAAT+GGG | - | Chr2:56104767-56104786 | None:intergenic | 45.0% |
| ! | TCCCATTGCACTTCTAGAAG+AGG | + | Chr2:56104763-56104782 | MsG0280009675.01.T01:intron | 45.0% |
| ! | TGCCTCTTCTAGAAGTGCAA+TGG | - | Chr2:56104768-56104787 | None:intergenic | 45.0% |
| !! | CACACAAGCATAGTCTTGTG+TGG | - | Chr2:56105342-56105361 | None:intergenic | 45.0% |
| !!! | AACGTGGGACTTGGGTTTTT+TGG | - | Chr2:56103537-56103556 | None:intergenic | 45.0% |
| !!! | ACGTGGGACTTGGGTTTTTT+GGG | - | Chr2:56103536-56103555 | None:intergenic | 45.0% |
| !! | AAATAAAATTCAATATAAAT+AGG | - | Chr2:56104584-56104603 | None:intergenic | 5.0% |
| !!! | ATTTATATTGAATTTTATTT+AGG | + | Chr2:56104584-56104603 | MsG0280009675.01.T01:intron | 5.0% |
| AGGGATAGGAGAGTGGAAGA+CGG | - | Chr2:56102633-56102652 | None:intergenic | 50.0% | |
| AGTGGAGGCTCATTCCATTC+TGG | + | Chr2:56105365-56105384 | MsG0280009675.01.T01:three_prime_UTR | 50.0% | |
| ATGGGTTTGGATAAGCACGG+AGG | + | Chr2:56105477-56105496 | MsG0280009675.01.T01:three_prime_UTR | 50.0% | |
| CAACACACCAGTGAGAGATC+TGG | - | Chr2:56103661-56103680 | None:intergenic | 50.0% | |
| CACGGTTGCAAGTGAGGTTA+AGG | + | Chr2:56104374-56104393 | MsG0280009675.01.T01:CDS | 50.0% | |
| CTTAACCTCACTTGCAACCG+TGG | - | Chr2:56104376-56104395 | None:intergenic | 50.0% | |
| GCATCTAGTTGCTGTGGAAC+TGG | + | Chr2:56104350-56104369 | MsG0280009675.01.T01:intron | 50.0% | |
| GCATTCCACACCTTACAAGC+TGG | + | Chr2:56103594-56103613 | MsG0280009675.01.T01:intron | 50.0% | |
| GTTGCAAGTGAGGTTAAGGC+AGG | + | Chr2:56104378-56104397 | MsG0280009675.01.T01:CDS | 50.0% | |
| TAGGCTCCCTCATTGCGAAA+TGG | - | Chr2:56105204-56105223 | None:intergenic | 50.0% | |
| TCATGGACCCTGTTGGACTT+CGG | + | Chr2:56104673-56104692 | MsG0280009675.01.T01:CDS | 50.0% | |
| TCCAACAGGGTCCATGAGTT+GGG | - | Chr2:56104670-56104689 | None:intergenic | 50.0% | |
| TCCGATCGTGGCCTTTACTA+TGG | + | Chr2:56103439-56103458 | MsG0280009675.01.T01:intron | 50.0% | |
| TCGTCAATCTCTGCACTTGC+AGG | - | Chr2:56104121-56104140 | None:intergenic | 50.0% | |
| TCTCTCACTGGTGTGTTGTC+GGG | + | Chr2:56103663-56103682 | MsG0280009675.01.T01:intron | 50.0% | |
| TGCAAGTGAGGTTAAGGCAG+GGG | + | Chr2:56104380-56104399 | MsG0280009675.01.T01:CDS | 50.0% | |
| TGGGTTTGGATAAGCACGGA+GGG | + | Chr2:56105478-56105497 | MsG0280009675.01.T01:three_prime_UTR | 50.0% | |
| TTACGCTCCAGATCTCTCAC+TGG | + | Chr2:56103651-56103670 | MsG0280009675.01.T01:intron | 50.0% | |
| TTGGATAAGCACGGAGGGAA+GGG | + | Chr2:56105483-56105502 | MsG0280009675.01.T01:three_prime_UTR | 50.0% | |
| TTTCGCAATGAGGGAGCCTA+CGG | + | Chr2:56105204-56105223 | MsG0280009675.01.T01:CDS | 50.0% | |
| TTTGGATAAGCACGGAGGGA+AGG | + | Chr2:56105482-56105501 | MsG0280009675.01.T01:three_prime_UTR | 50.0% | |
| ! | GATAAGGTTGGTTCCGATCG+TGG | + | Chr2:56103427-56103446 | MsG0280009675.01.T01:intron | 50.0% |
| ! | TCTCTGCACTTGCAGGCTTT+TGG | - | Chr2:56104114-56104133 | None:intergenic | 50.0% |
| ACCCAACTCATGGACCCTGT+TGG | + | Chr2:56104666-56104685 | MsG0280009675.01.T01:CDS | 55.0% | |
| AGTTGCTGTGGAACTGGCCA+CGG | + | Chr2:56104356-56104375 | MsG0280009675.01.T01:intron | 55.0% | |
| ATGACCCATTTCGCCGGAGA+AGG | - | Chr2:56102679-56102698 | None:intergenic | 55.0% | |
| ATTGCCAATCACGGAACGCG+TGG | - | Chr2:56103972-56103991 | None:intergenic | 55.0% | |
| ATTTCGCCGGAGAAGGTGAC+CGG | - | Chr2:56102672-56102691 | None:intergenic | 55.0% | |
| CACTGGTGTGTTGTCGGGTT+TGG | + | Chr2:56103668-56103687 | MsG0280009675.01.T01:intron | 55.0% | |
| GCTCCCTCATTGCGAAATGG+TGG | - | Chr2:56105201-56105220 | None:intergenic | 55.0% | |
| GTCACCTTCTCCGGCGAAAT+GGG | + | Chr2:56102672-56102691 | MsG0280009675.01.T01:CDS | 55.0% | |
| GTCCAACAGGGTCCATGAGT+TGG | - | Chr2:56104671-56104690 | None:intergenic | 55.0% | |
| TGGATAAGCACGGAGGGAAG+GGG | + | Chr2:56105484-56105503 | MsG0280009675.01.T01:three_prime_UTR | 55.0% | |
| TTGGGGATGACCCATTTCGC+CGG | - | Chr2:56102685-56102704 | None:intergenic | 55.0% | |
| ACTGGCCACGGTTGCAAGTG+AGG | + | Chr2:56104368-56104387 | MsG0280009675.01.T01:CDS | 60.0% | |
| ATCGCTCCGGTCACCTTCTC+CGG | + | Chr2:56102663-56102682 | MsG0280009675.01.T01:CDS | 60.0% | |
| CGCGTGGCAGGTAGAAAAGC+AGG | - | Chr2:56103956-56103975 | None:intergenic | 60.0% | |
| GGTCACCTTCTCCGGCGAAA+TGG | + | Chr2:56102671-56102690 | MsG0280009675.01.T01:CDS | 60.0% | |
| TCCACTCTCCTATCCCTCGC+CGG | + | Chr2:56102636-56102655 | MsG0280009675.01.T01:CDS | 60.0% | |
| CCAATCACGGAACGCGTGGC+AGG | - | Chr2:56103968-56103987 | None:intergenic | 65.0% | |
| CCTGCCACGCGTTCCGTGAT+TGG | + | Chr2:56103965-56103984 | MsG0280009675.01.T01:intron | 65.0% | |
| GGAGAAGGTGACCGGAGCGA+TGG | - | Chr2:56102664-56102683 | None:intergenic | 65.0% | |
| TCCGGCGAGGGATAGGAGAG+TGG | - | Chr2:56102640-56102659 | None:intergenic | 65.0% | |
| CGATGGCTCCGGCGAGGGAT+AGG | - | Chr2:56102647-56102666 | None:intergenic | 70.0% | |
| GGTGACCGGAGCGATGGCTC+CGG | - | Chr2:56102658-56102677 | None:intergenic | 70.0% | |
| CCTCGCCGGAGCCATCGCTC+CGG | + | Chr2:56102650-56102669 | MsG0280009675.01.T01:CDS | 75.0% | |
| CGGAGCGATGGCTCCGGCGA+GGG | - | Chr2:56102652-56102671 | None:intergenic | 75.0% | |
| ! | CCGGAGCGATGGCTCCGGCG+AGG | - | Chr2:56102653-56102672 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr2 | gene | 56102579 | 56105601 | 56102579 | ID=MsG0280009675.01;Name=MsG0280009675.01 |
| Chr2 | mRNA | 56102579 | 56105601 | 56102579 | ID=MsG0280009675.01.T01;Parent=MsG0280009675.01;Name=MsG0280009675.01.T01;_AED=0.32;_eAED=0.32;_QI=45|1|1|1|1|1|5|350|247 |
| Chr2 | exon | 56105094 | 56105601 | 56105094 | ID=MsG0280009675.01.T01:exon:18304;Parent=MsG0280009675.01.T01 |
| Chr2 | exon | 56104606 | 56104694 | 56104606 | ID=MsG0280009675.01.T01:exon:18303;Parent=MsG0280009675.01.T01 |
| Chr2 | exon | 56104358 | 56104496 | 56104358 | ID=MsG0280009675.01.T01:exon:18302;Parent=MsG0280009675.01.T01 |
| Chr2 | exon | 56104034 | 56104160 | 56104034 | ID=MsG0280009675.01.T01:exon:18301;Parent=MsG0280009675.01.T01 |
| Chr2 | exon | 56102579 | 56102854 | 56102579 | ID=MsG0280009675.01.T01:exon:18300;Parent=MsG0280009675.01.T01 |
| Chr2 | five_prime_UTR | 56102579 | 56102623 | 56102579 | ID=MsG0280009675.01.T01:five_prime_utr;Parent=MsG0280009675.01.T01 |
| Chr2 | CDS | 56102624 | 56102854 | 56102624 | ID=MsG0280009675.01.T01:cds;Parent=MsG0280009675.01.T01 |
| Chr2 | CDS | 56104034 | 56104160 | 56104034 | ID=MsG0280009675.01.T01:cds;Parent=MsG0280009675.01.T01 |
| Chr2 | CDS | 56104358 | 56104496 | 56104358 | ID=MsG0280009675.01.T01:cds;Parent=MsG0280009675.01.T01 |
| Chr2 | CDS | 56104606 | 56104694 | 56104606 | ID=MsG0280009675.01.T01:cds;Parent=MsG0280009675.01.T01 |
| Chr2 | CDS | 56105094 | 56105251 | 56105094 | ID=MsG0280009675.01.T01:cds;Parent=MsG0280009675.01.T01 |
| Chr2 | three_prime_UTR | 56105252 | 56105601 | 56105252 | ID=MsG0280009675.01.T01:three_prime_utr;Parent=MsG0280009675.01.T01 |
| Gene Sequence |
| Protein sequence |
