Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480019597.01.T01 | XP_024638798.2 | 88.214 | 543 | 40 | 4 | 75 | 617 | 6 | 524 | 0 | 898 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480019597.01.T01 | Q9C7E7 | 66.813 | 455 | 145 | 3 | 163 | 614 | 335 | 786 | 0 | 600 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480019597.01.T01 | G7IF06 | 92.795 | 458 | 29 | 2 | 163 | 617 | 378 | 834 | 0.0 | 787 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0480019492.01 | MsG0480019597.01 | 0.823654 | 1.232797e-53 | 1.068095e-50 |
PPI
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480019597.01.T01 | MTR_1g115920 | 92.795 | 458 | 29 | 2 | 163 | 617 | 378 | 834 | 0.0 | 787 |
| MsG0480019597.01.T01 | MTR_1g115920 | 83.871 | 124 | 11 | 4 | 1 | 118 | 26 | 146 | 1.74e-49 | 185 |
| MsG0480019597.01.T01 | MTR_1g115920 | 78.947 | 57 | 9 | 1 | 117 | 170 | 241 | 297 | 2.76e-11 | 67.0 |
| MsG0480019597.01.T01 | MTR_4g094355 | 84.074 | 270 | 19 | 4 | 75 | 344 | 6 | 251 | 2.56e-139 | 413 |
| MsG0480019597.01.T01 | MTR_4g094355 | 92.670 | 191 | 14 | 0 | 427 | 617 | 250 | 440 | 8.32e-123 | 370 |
| MsG0480019597.01.T01 | MTR_5g039050 | 84.305 | 223 | 26 | 3 | 307 | 529 | 67 | 280 | 6.24e-112 | 342 |
| MsG0480019597.01.T01 | MTR_5g039050 | 82.222 | 45 | 7 | 1 | 169 | 212 | 6 | 50 | 1.61e-14 | 76.3 |
| MsG0480019597.01.T01 | MTR_5g039100 | 69.159 | 107 | 21 | 4 | 15 | 118 | 7 | 104 | 1.31e-29 | 116 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480019597.01.T01 | AT1G28060 | 66.813 | 455 | 145 | 3 | 163 | 614 | 335 | 786 | 0.0 | 600 |
| MsG0480019597.01.T01 | AT1G28060 | 66.813 | 455 | 145 | 3 | 163 | 614 | 335 | 786 | 0.0 | 600 |
| MsG0480019597.01.T01 | AT1G28060 | 66.813 | 455 | 145 | 3 | 163 | 614 | 335 | 786 | 0.0 | 600 |
| MsG0480019597.01.T01 | AT3G55930 | 61.111 | 270 | 101 | 3 | 344 | 611 | 3 | 270 | 4.22e-97 | 298 |
Find 164 sgRNAs with CRISPR-Local
Find 179 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCACACAAGAACACATTTAT+TGG | 0.135860 | 4:+22934134 | None:intergenic |
| ACAAGTTTGTCCAACGTATT+TGG | 0.164418 | 4:+22934387 | None:intergenic |
| ATAAAATTGAAGAGTAAATT+TGG | 0.190886 | 4:-22935014 | MsG0480019597.01.T01:CDS |
| TGCTGGGGTTCCTCATTATT+GGG | 0.233213 | 4:-22934025 | MsG0480019597.01.T01:CDS |
| AATTGGATGATAAGAGAATT+AGG | 0.237950 | 4:-22935538 | MsG0480019597.01.T01:CDS |
| ATGCTGGGGTTCCTCATTAT+TGG | 0.242299 | 4:-22934026 | MsG0480019597.01.T01:CDS |
| ACAAACTTGTCTCACTTTAC+AGG | 0.244618 | 4:-22934374 | MsG0480019597.01.T01:CDS |
| CTTCTGCATTCTGGAAATTA+TGG | 0.253483 | 4:-22934831 | MsG0480019597.01.T01:CDS |
| CCCTGTCTCTGCTTCCTTCT+CGG | 0.262332 | 4:+22935693 | None:intergenic |
| CTCATCTTGACCTTTGGTTT+TGG | 0.279974 | 4:+22934582 | None:intergenic |
| AGGAAGCAGAGACAGGGATA+TGG | 0.287407 | 4:-22935687 | MsG0480019597.01.T01:CDS |
| CTTTGCTAGCTGTGCTTGTT+TGG | 0.291419 | 4:+22934965 | None:intergenic |
| CTCGGTCTTCTCTGTGATTC+CGG | 0.301582 | 4:+22935711 | None:intergenic |
| TCCTGTTTAGTTGGCTTGAT+AGG | 0.304342 | 4:+22934687 | None:intergenic |
| TCACCTTAGCTATACGCCTT+TGG | 0.310566 | 4:+22934646 | None:intergenic |
| ATTAAGTTCGGATTGATATC+AGG | 0.315138 | 4:+22934930 | None:intergenic |
| CACCTTAGCTATACGCCTTT+GGG | 0.317473 | 4:+22934647 | None:intergenic |
| AAGCAACCTTAGCACATTAA+AGG | 0.318390 | 4:-22935219 | MsG0480019597.01.T01:CDS |
| TTCTTCTGCTCCTGTTTAGT+TGG | 0.318787 | 4:+22934678 | None:intergenic |
| CATCAGAATCGTGCCGGTTC+CGG | 0.331455 | 4:+22935756 | None:intergenic |
| GGTGGAGGGGCGGGCTCAGC+AGG | 0.333316 | 4:+22934717 | None:intergenic |
| GACGTGGCACTTCTGCATTC+TGG | 0.335270 | 4:-22934840 | MsG0480019597.01.T01:CDS |
| GTTCATCTATTTCACGTCCC+TGG | 0.343803 | 4:+22935270 | None:intergenic |
| ATGATAAGAGAATTAGGGTT+AGG | 0.350518 | 4:-22935532 | MsG0480019597.01.T01:CDS |
| TGAAATACTAAAACCTGTAT+TGG | 0.355353 | 4:-22935165 | MsG0480019597.01.T01:CDS |
| GAACCTATTGAAGCTCGATT+TGG | 0.361063 | 4:+22934098 | None:intergenic |
| AGATGAAGGCAATATGAAAA+TGG | 0.363556 | 4:-22934784 | MsG0480019597.01.T01:CDS |
| TGCAGCTGCTGAGCGTGAGC+AGG | 0.369144 | 4:-22934490 | MsG0480019597.01.T01:CDS |
| AAGAAGGAACGTAGGAGATT+TGG | 0.374683 | 4:-22935497 | MsG0480019597.01.T01:CDS |
| AAATTACTCATCTTGACCTT+TGG | 0.381357 | 4:+22934576 | None:intergenic |
| ACCGTAACCATCACCGGAAC+CGG | 0.388029 | 4:-22935769 | MsG0480019597.01.T01:CDS |
| ATTGGATGATAAGAGAATTA+GGG | 0.389557 | 4:-22935537 | MsG0480019597.01.T01:CDS |
| AGGTTGAGGTGGTGGAGGGG+CGG | 0.390911 | 4:+22934707 | None:intergenic |
| TGTTTGTGGAGGAAGGAAAA+TGG | 0.392737 | 4:-22935055 | MsG0480019597.01.T01:CDS |
| TCTGTAATTTCTATTAAGTT+CGG | 0.393587 | 4:+22934918 | None:intergenic |
| CAAGTTTGTCCAACGTATTT+GGG | 0.397091 | 4:+22934388 | None:intergenic |
| TTGATAGGTTGAGGTGGTGG+AGG | 0.401991 | 4:+22934702 | None:intergenic |
| AGCAAGTCAATTAAGAGGTA+TGG | 0.404160 | 4:-22934231 | MsG0480019597.01.T01:CDS |
| TTCTTCTCACGCAGCTCAGC+AGG | 0.405655 | 4:+22934432 | None:intergenic |
| TTGCCAAATCGAGCTTCAAT+AGG | 0.406342 | 4:-22934101 | MsG0480019597.01.T01:CDS |
| TCAAAATGAGGATTAGATTC+AGG | 0.407433 | 4:+22935134 | None:intergenic |
| ACCTATCAAGCCAACTAAAC+AGG | 0.413749 | 4:-22934688 | MsG0480019597.01.T01:CDS |
| TTCATCTATTTCACGTCCCT+GGG | 0.414957 | 4:+22935271 | None:intergenic |
| GGTTGAGGTGGTGGAGGGGC+GGG | 0.419674 | 4:+22934708 | None:intergenic |
| ATAAACTCTAGAGCGGGCCT+TGG | 0.420863 | 4:+22934332 | None:intergenic |
| CTCGATACTCCTCGCATAAG+AGG | 0.421449 | 4:-22935592 | MsG0480019597.01.T01:CDS |
| ATATAGCGATGATCGGGAAT+TGG | 0.423849 | 4:-22935555 | MsG0480019597.01.T01:CDS |
| ACCGAGAAGGAAGCAGAGAC+AGG | 0.430015 | 4:-22935694 | MsG0480019597.01.T01:CDS |
| TTTAATGTGCTAAGGTTGCT+TGG | 0.430099 | 4:+22935221 | None:intergenic |
| CACCACTCAATATCCGGAAT+CGG | 0.431295 | 4:+22934864 | None:intergenic |
| GGAAGCAGAGACAGGGATAT+GGG | 0.431480 | 4:-22935686 | MsG0480019597.01.T01:CDS |
| GGCTCAGCAGGCGGTTCAAT+AGG | 0.433119 | 4:+22934729 | None:intergenic |
| CAAAGCTCCTGCGGCCTAAG+AGG | 0.436122 | 4:-22935088 | MsG0480019597.01.T01:CDS |
| GGCTTGATAGGTTGAGGTGG+TGG | 0.440923 | 4:+22934699 | None:intergenic |
| TGTTCTTCGTCTTGACGCCC+AGG | 0.441585 | 4:-22935288 | MsG0480019597.01.T01:CDS |
| GTTACGGTCGCGGTCATGTT+CGG | 0.446270 | 4:+22935784 | None:intergenic |
| AACAGAAAATTCATCCTCTT+AGG | 0.449563 | 4:+22935074 | None:intergenic |
| GGAGGGGCGGGCTCAGCAGG+CGG | 0.453459 | 4:+22934720 | None:intergenic |
| AAAACTGAAGGACCCGATTC+CGG | 0.455391 | 4:-22934877 | MsG0480019597.01.T01:CDS |
| TGATAAGAGAATTAGGGTTA+GGG | 0.455771 | 4:-22935531 | MsG0480019597.01.T01:CDS |
| ACGTCCCACCACTCAATATC+CGG | 0.458176 | 4:+22934858 | None:intergenic |
| GCCGGTTCCGGTGATGGTTA+CGG | 0.466812 | 4:+22935768 | None:intergenic |
| TCCGGTGATGGTTACGGTCG+CGG | 0.470181 | 4:+22935774 | None:intergenic |
| TGCTGAGCTGCGTGAGAAGA+AGG | 0.474449 | 4:-22934430 | MsG0480019597.01.T01:CDS |
| AGATCCCACCCGGCTTGAAA+AGG | 0.474598 | 4:-22934523 | MsG0480019597.01.T01:CDS |
| CATTTGTATAGTTGACAGCT+TGG | 0.476752 | 4:+22934001 | None:intergenic |
| AATCGTGCCGGTTCCGGTGA+TGG | 0.479993 | 4:+22935762 | None:intergenic |
| AGGAGATTTGGTGATAAACT+TGG | 0.481118 | 4:-22935485 | MsG0480019597.01.T01:CDS |
| GTGAGCAGGCTCACATAGAT+AGG | 0.485650 | 4:-22934476 | MsG0480019597.01.T01:CDS |
| GAAAGAGAGGGTAGCAAAGG+TGG | 0.491490 | 4:-22935650 | MsG0480019597.01.T01:CDS |
| GCTCAACAAAATCGTTTGAC+TGG | 0.491510 | 4:-22934303 | MsG0480019597.01.T01:CDS |
| TAGGGTTTCTGAAGCAAAGA+AGG | 0.491982 | 4:-22935513 | MsG0480019597.01.T01:CDS |
| TTCAGAAGAAAGCACACAGT+TGG | 0.492012 | 4:-22935357 | MsG0480019597.01.T01:CDS |
| ATGTTCGGAGTGTCGCCTAT+CGG | 0.492896 | 4:+22935799 | None:intergenic |
| AGAAGAATATAGCGATGATC+GGG | 0.497936 | 4:-22935561 | MsG0480019597.01.T01:CDS |
| AGTAATTTACATAAGGTGCT+AGG | 0.498879 | 4:-22934561 | MsG0480019597.01.T01:CDS |
| TGGGCGTCAAGACGAAGAAC+AGG | 0.500740 | 4:+22935290 | None:intergenic |
| TCAGGATCGACATCCAATAC+AGG | 0.501479 | 4:+22935152 | None:intergenic |
| CAAACTTGTCTCACTTTACA+GGG | 0.502069 | 4:-22934373 | MsG0480019597.01.T01:CDS |
| CAAGATGAGTAATTTACATA+AGG | 0.502552 | 4:-22934568 | MsG0480019597.01.T01:CDS |
| GCCTTCATCTATAGTACCGT+TGG | 0.504964 | 4:+22934797 | None:intergenic |
| GTTAGCGTTGTCATGGTTGA+AGG | 0.505607 | 4:-22934258 | MsG0480019597.01.T01:CDS |
| GGAGCCTTGGTTGGTTTCTG+AGG | 0.506975 | 4:+22935311 | None:intergenic |
| TGCCTTAGCAAAGGCTAAGA+AGG | 0.507867 | 4:-22935444 | MsG0480019597.01.T01:CDS |
| TGATAGGTTGAGGTGGTGGA+GGG | 0.509364 | 4:+22934703 | None:intergenic |
| ACCACTCAATATCCGGAATC+GGG | 0.511345 | 4:+22934865 | None:intergenic |
| GCAAGTCAATTAAGAGGTAT+GGG | 0.512247 | 4:-22934230 | MsG0480019597.01.T01:CDS |
| TCAGAAGAAAGCACACAGTT+GGG | 0.515196 | 4:-22935356 | MsG0480019597.01.T01:CDS |
| TAAACTCTAGAGCGGGCCTT+GGG | 0.515382 | 4:+22934333 | None:intergenic |
| CGAAGAACAGGAGCCTTGGT+TGG | 0.517067 | 4:+22935302 | None:intergenic |
| TTATGCTTAGACGTATCAAA+TGG | 0.519358 | 4:-22934203 | MsG0480019597.01.T01:CDS |
| GTGGAAGCAAGTCAATTAAG+AGG | 0.522404 | 4:-22934236 | MsG0480019597.01.T01:CDS |
| ATCGAAGCGCGATGAAGAGA+GGG | 0.529353 | 4:-22935621 | MsG0480019597.01.T01:CDS |
| ACTTTCATGTGGAACATCCT+CGG | 0.530971 | 4:-22934752 | MsG0480019597.01.T01:CDS |
| TGATGGTGTTAGCGTTGTCA+TGG | 0.533176 | 4:-22934265 | MsG0480019597.01.T01:CDS |
| GAGCCTTGGTTGGTTTCTGA+GGG | 0.533893 | 4:+22935312 | None:intergenic |
| GACCCAAAGGCGTATAGCTA+AGG | 0.534462 | 4:-22934649 | MsG0480019597.01.T01:CDS |
| AGCTCAAGCAAAAGAGCAGA+AGG | 0.535132 | 4:-22934988 | MsG0480019597.01.T01:CDS |
| GGATATTGAGTGGTGGGACG+TGG | 0.536150 | 4:-22934856 | MsG0480019597.01.T01:CDS |
| GAGAAGAATATAGCGATGAT+CGG | 0.536885 | 4:-22935562 | MsG0480019597.01.T01:CDS |
| ACCGCGACCGTAACCATCAC+CGG | 0.538461 | 4:-22935775 | MsG0480019597.01.T01:CDS |
| GAGGGATGTTTCAAAAGAGA+AGG | 0.538571 | 4:-22934181 | MsG0480019597.01.T01:CDS |
| CCCATTCTCTCATCAAAATG+AGG | 0.549338 | 4:+22935122 | None:intergenic |
| CAAACAAGCACAGCTAGCAA+AGG | 0.555686 | 4:-22934964 | MsG0480019597.01.T01:CDS |
| TTCTGAGGGACAGTAACGTC+GGG | 0.556866 | 4:+22935326 | None:intergenic |
| AAGACGAAGAACAGGAGCCT+TGG | 0.557281 | 4:+22935298 | None:intergenic |
| TTCATCTATAGTACCGTTGG+CGG | 0.558630 | 4:+22934800 | None:intergenic |
| AATCGAAGCGCGATGAAGAG+AGG | 0.561052 | 4:-22935622 | MsG0480019597.01.T01:CDS |
| GACGAAAGAGAGGGTAGCAA+AGG | 0.561832 | 4:-22935653 | MsG0480019597.01.T01:CDS |
| TGTTGACCTTTAATGTGCTA+AGG | 0.561959 | 4:+22935213 | None:intergenic |
| GTTCTTCGTCTTGACGCCCA+GGG | 0.562372 | 4:-22935287 | MsG0480019597.01.T01:CDS |
| AATTCATCCTCTTAGGCCGC+AGG | 0.563858 | 4:+22935081 | None:intergenic |
| GTAATTTACATAAGGTGCTA+GGG | 0.564338 | 4:-22934560 | MsG0480019597.01.T01:CDS |
| TTAGTTGGCTTGATAGGTTG+AGG | 0.576255 | 4:+22934693 | None:intergenic |
| GGAAGAATTCAACTTTCATG+TGG | 0.576369 | 4:-22934763 | MsG0480019597.01.T01:CDS |
| AGCCTTCTTAGCCTTTGCTA+AGG | 0.581971 | 4:+22935442 | None:intergenic |
| GATAGGTTGAGGTGGTGGAG+GGG | 0.582077 | 4:+22934704 | None:intergenic |
| GGTCAGATCGATGATGGCGG+TGG | 0.582301 | 4:+22935732 | None:intergenic |
| CCGAGAAGGAAGCAGAGACA+GGG | 0.584656 | 4:-22935693 | MsG0480019597.01.T01:CDS |
| GTTGGCTTGATAGGTTGAGG+TGG | 0.586185 | 4:+22934696 | None:intergenic |
| GCCAACGGTACTATAGATGA+AGG | 0.586217 | 4:-22934798 | MsG0480019597.01.T01:CDS |
| CTAAGGCATCACTACTAGAG+AGG | 0.588190 | 4:+22935459 | None:intergenic |
| GATTCCGGTCAGATCGATGA+TGG | 0.589596 | 4:+22935726 | None:intergenic |
| ATTAACATAAACTCTAGAGC+GGG | 0.591581 | 4:+22934326 | None:intergenic |
| TGCTTAGACGTATCAAATGG+AGG | 0.592616 | 4:-22934200 | MsG0480019597.01.T01:CDS |
| TATGGTGACATTGCCGCCAA+CGG | 0.595136 | 4:-22934813 | MsG0480019597.01.T01:CDS |
| GGATGTGCGGTGATTTGTGA+TGG | 0.599326 | 4:-22934282 | MsG0480019597.01.T01:CDS |
| TCTATCTTTCCTCTTATGCG+AGG | 0.606208 | 4:+22935583 | None:intergenic |
| GACAGGGATATGGGATACGA+TGG | 0.607091 | 4:-22935677 | MsG0480019597.01.T01:CDS |
| GTTTGATGACCCAAATACGT+TGG | 0.608108 | 4:-22934397 | MsG0480019597.01.T01:CDS |
| GGTGGTCATCAGAATCGTGC+CGG | 0.608684 | 4:+22935750 | None:intergenic |
| ACCGCCATCATCGATCTGAC+CGG | 0.610844 | 4:-22935730 | MsG0480019597.01.T01:CDS |
| GCTTAGACGTATCAAATGGA+GGG | 0.611542 | 4:-22934199 | MsG0480019597.01.T01:CDS |
| CGATTCCGGATATTGAGTGG+TGG | 0.614030 | 4:-22934863 | MsG0480019597.01.T01:CDS |
| AAATGACCTCTCTCATCCCA+AGG | 0.616566 | 4:-22934349 | MsG0480019597.01.T01:CDS |
| TGTAATGAAAGCAAAACTGA+AGG | 0.617069 | 4:-22934889 | MsG0480019597.01.T01:CDS |
| ACAGCTTGGTCCCAATAATG+AGG | 0.617442 | 4:+22934015 | None:intergenic |
| GAATTTGAGTTATTCAACTG+AGG | 0.620565 | 4:+22935377 | None:intergenic |
| TAGTAGTGATGCCTTAGCAA+AGG | 0.620911 | 4:-22935453 | MsG0480019597.01.T01:CDS |
| ATACGATGGAGACGAAAGAG+AGG | 0.628066 | 4:-22935663 | MsG0480019597.01.T01:CDS |
| GCAGGCGGTTCAATAGGCCG+AGG | 0.628346 | 4:+22934735 | None:intergenic |
| AAAGAGAGGGTAGCAAAGGT+GGG | 0.628355 | 4:-22935649 | MsG0480019597.01.T01:CDS |
| CATAGAACCGCCAAAACCAA+AGG | 0.629032 | 4:-22934592 | MsG0480019597.01.T01:CDS |
| CGACAGGAGATGATTAGACA+TGG | 0.631416 | 4:-22934618 | MsG0480019597.01.T01:CDS |
| CCAATAAATGTGTTCTTGTG+TGG | 0.635554 | 4:-22934134 | MsG0480019597.01.T01:CDS |
| AAATGTGTTCTTGTGTGGCA+AGG | 0.639668 | 4:-22934129 | MsG0480019597.01.T01:CDS |
| TTTCTGAGGGACAGTAACGT+CGG | 0.642738 | 4:+22935325 | None:intergenic |
| GATTCCGGATATTGAGTGGT+GGG | 0.645660 | 4:-22934862 | MsG0480019597.01.T01:CDS |
| AGCGTTGTCATGGTTGAAGG+TGG | 0.646862 | 4:-22934255 | MsG0480019597.01.T01:CDS |
| ACCCGATTCCGGATATTGAG+TGG | 0.647460 | 4:-22934866 | MsG0480019597.01.T01:CDS |
| AGCGGGCCTTGGGATGAGAG+AGG | 0.647591 | 4:+22934343 | None:intergenic |
| AGAAGAAACTAAAGACCCAA+AGG | 0.655642 | 4:-22934662 | MsG0480019597.01.T01:CDS |
| GGACGTGAAATAGATGAACA+TGG | 0.655823 | 4:-22935266 | MsG0480019597.01.T01:CDS |
| GAAGCGCGATGAAGAGAGGG+AGG | 0.664190 | 4:-22935618 | MsG0480019597.01.T01:CDS |
| ACGAGAGAGACAAATCCGAT+AGG | 0.669354 | 4:-22935814 | MsG0480019597.01.T01:CDS |
| AATCACAGAGAAGACCGAGA+AGG | 0.670001 | 4:-22935707 | MsG0480019597.01.T01:CDS |
| TACGATGGAGACGAAAGAGA+GGG | 0.671943 | 4:-22935662 | MsG0480019597.01.T01:CDS |
| CTGAAGCAAAGAAGGAACGT+AGG | 0.673233 | 4:-22935505 | MsG0480019597.01.T01:CDS |
| CATTAACATAAACTCTAGAG+CGG | 0.690364 | 4:+22934325 | None:intergenic |
| AAATCGTTTGACTGGATGTG+CGG | 0.693768 | 4:-22934295 | MsG0480019597.01.T01:CDS |
| TCGACAAAACAAAGCTCCTG+CGG | 0.696622 | 4:-22935097 | MsG0480019597.01.T01:CDS |
| TCCGGTCAGATCGATGATGG+CGG | 0.696675 | 4:+22935729 | None:intergenic |
| AAGCAACTCAAGATCCCACC+CGG | 0.703568 | 4:-22934533 | MsG0480019597.01.T01:CDS |
| TGTCCCTCAGAAACCAACCA+AGG | 0.741969 | 4:-22935315 | MsG0480019597.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAAATTGAAGAGTAAATT+TGG | - | Chr4:22934791-22934810 | MsG0480019597.01.T01:CDS | 15.0% |
| !! | TCTGTAATTTCTATTAAGTT+CGG | + | Chr4:22934890-22934909 | None:intergenic | 20.0% |
| ! | AATTGGATGATAAGAGAATT+AGG | - | Chr4:22934267-22934286 | MsG0480019597.01.T01:CDS | 25.0% |
| ! | ATTGGATGATAAGAGAATTA+GGG | - | Chr4:22934268-22934287 | MsG0480019597.01.T01:CDS | 25.0% |
| ! | CAAGATGAGTAATTTACATA+AGG | - | Chr4:22935237-22935256 | MsG0480019597.01.T01:CDS | 25.0% |
| ! | TGAAATACTAAAACCTGTAT+TGG | - | Chr4:22934640-22934659 | MsG0480019597.01.T01:CDS | 25.0% |
| AAATTACTCATCTTGACCTT+TGG | + | Chr4:22935232-22935251 | None:intergenic | 30.0% | |
| AACAGAAAATTCATCCTCTT+AGG | + | Chr4:22934734-22934753 | None:intergenic | 30.0% | |
| AGATGAAGGCAATATGAAAA+TGG | - | Chr4:22935021-22935040 | MsG0480019597.01.T01:CDS | 30.0% | |
| ATGATAAGAGAATTAGGGTT+AGG | - | Chr4:22934273-22934292 | MsG0480019597.01.T01:CDS | 30.0% | |
| ATTAAGTTCGGATTGATATC+AGG | + | Chr4:22934878-22934897 | None:intergenic | 30.0% | |
| TCAAAATGAGGATTAGATTC+AGG | + | Chr4:22934674-22934693 | None:intergenic | 30.0% | |
| TGATAAGAGAATTAGGGTTA+GGG | - | Chr4:22934274-22934293 | MsG0480019597.01.T01:CDS | 30.0% | |
| TGTAATGAAAGCAAAACTGA+AGG | - | Chr4:22934916-22934935 | MsG0480019597.01.T01:CDS | 30.0% | |
| TTATGCTTAGACGTATCAAA+TGG | - | Chr4:22935602-22935621 | MsG0480019597.01.T01:CDS | 30.0% | |
| ! | AGTAATTTACATAAGGTGCT+AGG | - | Chr4:22935244-22935263 | MsG0480019597.01.T01:CDS | 30.0% |
| ! | CATTAACATAAACTCTAGAG+CGG | + | Chr4:22935483-22935502 | None:intergenic | 30.0% |
| ! | GAATTTGAGTTATTCAACTG+AGG | + | Chr4:22934431-22934450 | None:intergenic | 30.0% |
| ! | GTAATTTACATAAGGTGCTA+GGG | - | Chr4:22935245-22935264 | MsG0480019597.01.T01:CDS | 30.0% |
| !! | ATTAACATAAACTCTAGAGC+GGG | + | Chr4:22935482-22935501 | None:intergenic | 30.0% |
| AAGCAACCTTAGCACATTAA+AGG | - | Chr4:22934586-22934605 | MsG0480019597.01.T01:CDS | 35.0% | |
| ACAAACTTGTCTCACTTTAC+AGG | - | Chr4:22935431-22935450 | MsG0480019597.01.T01:CDS | 35.0% | |
| ACAAGTTTGTCCAACGTATT+TGG | + | Chr4:22935421-22935440 | None:intergenic | 35.0% | |
| AGAAGAAACTAAAGACCCAA+AGG | - | Chr4:22935143-22935162 | MsG0480019597.01.T01:CDS | 35.0% | |
| AGAAGAATATAGCGATGATC+GGG | - | Chr4:22934244-22934263 | MsG0480019597.01.T01:CDS | 35.0% | |
| AGCAAGTCAATTAAGAGGTA+TGG | - | Chr4:22935574-22935593 | MsG0480019597.01.T01:CDS | 35.0% | |
| CAAACTTGTCTCACTTTACA+GGG | - | Chr4:22935432-22935451 | MsG0480019597.01.T01:CDS | 35.0% | |
| CAAGTTTGTCCAACGTATTT+GGG | + | Chr4:22935420-22935439 | None:intergenic | 35.0% | |
| CATTTGTATAGTTGACAGCT+TGG | + | Chr4:22935807-22935826 | None:intergenic | 35.0% | |
| CCAATAAATGTGTTCTTGTG+TGG | - | Chr4:22935671-22935690 | MsG0480019597.01.T01:CDS | 35.0% | |
| CCACACAAGAACACATTTAT+TGG | + | Chr4:22935674-22935693 | None:intergenic | 35.0% | |
| GAGAAGAATATAGCGATGAT+CGG | - | Chr4:22934243-22934262 | MsG0480019597.01.T01:CDS | 35.0% | |
| GGAAGAATTCAACTTTCATG+TGG | - | Chr4:22935042-22935061 | MsG0480019597.01.T01:CDS | 35.0% | |
| TGTTGACCTTTAATGTGCTA+AGG | + | Chr4:22934595-22934614 | None:intergenic | 35.0% | |
| TTTAATGTGCTAAGGTTGCT+TGG | + | Chr4:22934587-22934606 | None:intergenic | 35.0% | |
| ! | AATTTTCTGTTTGTGGAGGA+AGG | - | Chr4:22934743-22934762 | MsG0480019597.01.T01:CDS | 35.0% |
| ! | CTTCTGCATTCTGGAAATTA+TGG | - | Chr4:22934974-22934993 | MsG0480019597.01.T01:CDS | 35.0% |
| ! | GAGGATGAATTTTCTGTTTG+TGG | - | Chr4:22934736-22934755 | MsG0480019597.01.T01:CDS | 35.0% |
| ! | GATGAATTTTCTGTTTGTGG+AGG | - | Chr4:22934739-22934758 | MsG0480019597.01.T01:CDS | 35.0% |
| ! | GCAAGTCAATTAAGAGGTAT+GGG | - | Chr4:22935575-22935594 | MsG0480019597.01.T01:CDS | 35.0% |
| ! | GTAAAGTTTTTGTGGATGCT+GGG | - | Chr4:22935764-22935783 | MsG0480019597.01.T01:CDS | 35.0% |
| ! | TAAAGTTTTTGTGGATGCTG+GGG | - | Chr4:22935765-22935784 | MsG0480019597.01.T01:CDS | 35.0% |
| !! | AGGAGATTTGGTGATAAACT+TGG | - | Chr4:22934320-22934339 | MsG0480019597.01.T01:CDS | 35.0% |
| !! | CCTCATTTTGATGAGAGAAT+GGG | - | Chr4:22934683-22934702 | MsG0480019597.01.T01:CDS | 35.0% |
| !! | TCCTCATTTTGATGAGAGAA+TGG | - | Chr4:22934682-22934701 | MsG0480019597.01.T01:CDS | 35.0% |
| AAATCGTTTGACTGGATGTG+CGG | - | Chr4:22935510-22935529 | MsG0480019597.01.T01:CDS | 40.0% | |
| AAATGTGTTCTTGTGTGGCA+AGG | - | Chr4:22935676-22935695 | MsG0480019597.01.T01:CDS | 40.0% | |
| AAGAAGGAACGTAGGAGATT+TGG | - | Chr4:22934308-22934327 | MsG0480019597.01.T01:CDS | 40.0% | |
| ACCTATCAAGCCAACTAAAC+AGG | - | Chr4:22935117-22935136 | MsG0480019597.01.T01:CDS | 40.0% | |
| ACTTTCATGTGGAACATCCT+CGG | - | Chr4:22935053-22935072 | MsG0480019597.01.T01:CDS | 40.0% | |
| ATATAGCGATGATCGGGAAT+TGG | - | Chr4:22934250-22934269 | MsG0480019597.01.T01:CDS | 40.0% | |
| CCCATTCTCTCATCAAAATG+AGG | + | Chr4:22934686-22934705 | None:intergenic | 40.0% | |
| GAACCTATTGAAGCTCGATT+TGG | + | Chr4:22935710-22935729 | None:intergenic | 40.0% | |
| GAGGGATGTTTCAAAAGAGA+AGG | - | Chr4:22935624-22935643 | MsG0480019597.01.T01:CDS | 40.0% | |
| GCTCAACAAAATCGTTTGAC+TGG | - | Chr4:22935502-22935521 | MsG0480019597.01.T01:CDS | 40.0% | |
| GCTTAGACGTATCAAATGGA+GGG | - | Chr4:22935606-22935625 | MsG0480019597.01.T01:CDS | 40.0% | |
| GGACGTGAAATAGATGAACA+TGG | - | Chr4:22934539-22934558 | MsG0480019597.01.T01:CDS | 40.0% | |
| GTGGAAGCAAGTCAATTAAG+AGG | - | Chr4:22935569-22935588 | MsG0480019597.01.T01:CDS | 40.0% | |
| TAGTAGTGATGCCTTAGCAA+AGG | - | Chr4:22934352-22934371 | MsG0480019597.01.T01:CDS | 40.0% | |
| TCTATCTTTCCTCTTATGCG+AGG | + | Chr4:22934225-22934244 | None:intergenic | 40.0% | |
| TGCTTAGACGTATCAAATGG+AGG | - | Chr4:22935605-22935624 | MsG0480019597.01.T01:CDS | 40.0% | |
| TGTTTGTGGAGGAAGGAAAA+TGG | - | Chr4:22934750-22934769 | MsG0480019597.01.T01:CDS | 40.0% | |
| TTCATCTATAGTACCGTTGG+CGG | + | Chr4:22935008-22935027 | None:intergenic | 40.0% | |
| TTCATCTATTTCACGTCCCT+GGG | + | Chr4:22934537-22934556 | None:intergenic | 40.0% | |
| TTCTTCTGCTCCTGTTTAGT+TGG | + | Chr4:22935130-22935149 | None:intergenic | 40.0% | |
| TTGCCAAATCGAGCTTCAAT+AGG | - | Chr4:22935704-22935723 | MsG0480019597.01.T01:CDS | 40.0% | |
| ! | AGCTGCTCGTAAAGTTTTTG+TGG | - | Chr4:22935756-22935775 | MsG0480019597.01.T01:CDS | 40.0% |
| ! | CGTAAAGTTTTTGTGGATGC+TGG | - | Chr4:22935763-22935782 | MsG0480019597.01.T01:CDS | 40.0% |
| ! | GTTTGATGACCCAAATACGT+TGG | - | Chr4:22935408-22935427 | MsG0480019597.01.T01:CDS | 40.0% |
| ! | TCAGAAGAAAGCACACAGTT+GGG | - | Chr4:22934449-22934468 | MsG0480019597.01.T01:CDS | 40.0% |
| ! | TTCAGAAGAAAGCACACAGT+TGG | - | Chr4:22934448-22934467 | MsG0480019597.01.T01:CDS | 40.0% |
| !! | CTCATCTTGACCTTTGGTTT+TGG | + | Chr4:22935226-22935245 | None:intergenic | 40.0% |
| !! | TAGGGTTTCTGAAGCAAAGA+AGG | - | Chr4:22934292-22934311 | MsG0480019597.01.T01:CDS | 40.0% |
| !! | TCCTGTTTAGTTGGCTTGAT+AGG | + | Chr4:22935121-22935140 | None:intergenic | 40.0% |
| !! | TTAGTTGGCTTGATAGGTTG+AGG | + | Chr4:22935115-22935134 | None:intergenic | 40.0% |
| !!! | ATCTTGACCTTTGGTTTTGG+CGG | + | Chr4:22935223-22935242 | None:intergenic | 40.0% |
| AAAACTGAAGGACCCGATTC+CGG | - | Chr4:22934928-22934947 | MsG0480019597.01.T01:CDS | 45.0% | |
| AAAGAGAGGGTAGCAAAGGT+GGG | - | Chr4:22934156-22934175 | MsG0480019597.01.T01:CDS | 45.0% | |
| AAATGACCTCTCTCATCCCA+AGG | - | Chr4:22935456-22935475 | MsG0480019597.01.T01:CDS | 45.0% | |
| AATCACAGAGAAGACCGAGA+AGG | - | Chr4:22934098-22934117 | MsG0480019597.01.T01:CDS | 45.0% | |
| ACAGCTTGGTCCCAATAATG+AGG | + | Chr4:22935793-22935812 | None:intergenic | 45.0% | |
| ACCACTCAATATCCGGAATC+GGG | + | Chr4:22934943-22934962 | None:intergenic | 45.0% | |
| ACGAGAGAGACAAATCCGAT+AGG | - | Chr4:22933991-22934010 | MsG0480019597.01.T01:CDS | 45.0% | |
| AGCTAAGGTGAAAAAGCGAC+AGG | - | Chr4:22935171-22935190 | MsG0480019597.01.T01:CDS | 45.0% | |
| AGCTCAAGCAAAAGAGCAGA+AGG | - | Chr4:22934817-22934836 | MsG0480019597.01.T01:CDS | 45.0% | |
| ATACGATGGAGACGAAAGAG+AGG | - | Chr4:22934142-22934161 | MsG0480019597.01.T01:CDS | 45.0% | |
| ATGCTGGGGTTCCTCATTAT+TGG | - | Chr4:22935779-22935798 | MsG0480019597.01.T01:CDS | 45.0% | |
| CAAACAAGCACAGCTAGCAA+AGG | - | Chr4:22934841-22934860 | MsG0480019597.01.T01:CDS | 45.0% | |
| CACCACTCAATATCCGGAAT+CGG | + | Chr4:22934944-22934963 | None:intergenic | 45.0% | |
| CACCTTAGCTATACGCCTTT+GGG | + | Chr4:22935161-22935180 | None:intergenic | 45.0% | |
| CATAGAACCGCCAAAACCAA+AGG | - | Chr4:22935213-22935232 | MsG0480019597.01.T01:CDS | 45.0% | |
| CGACAGGAGATGATTAGACA+TGG | - | Chr4:22935187-22935206 | MsG0480019597.01.T01:CDS | 45.0% | |
| CTGAAGCAAAGAAGGAACGT+AGG | - | Chr4:22934300-22934319 | MsG0480019597.01.T01:CDS | 45.0% | |
| CTTTGCTAGCTGTGCTTGTT+TGG | + | Chr4:22934843-22934862 | None:intergenic | 45.0% | |
| GATTCCGGATATTGAGTGGT+GGG | - | Chr4:22934943-22934962 | MsG0480019597.01.T01:CDS | 45.0% | |
| GCCAACGGTACTATAGATGA+AGG | - | Chr4:22935007-22935026 | MsG0480019597.01.T01:CDS | 45.0% | |
| GCCTTCATCTATAGTACCGT+TGG | + | Chr4:22935011-22935030 | None:intergenic | 45.0% | |
| GTTAGCGTTGTCATGGTTGA+AGG | - | Chr4:22935547-22935566 | MsG0480019597.01.T01:CDS | 45.0% | |
| GTTCATCTATTTCACGTCCC+TGG | + | Chr4:22934538-22934557 | None:intergenic | 45.0% | |
| TACGATGGAGACGAAAGAGA+GGG | - | Chr4:22934143-22934162 | MsG0480019597.01.T01:CDS | 45.0% | |
| TCACCTTAGCTATACGCCTT+TGG | + | Chr4:22935162-22935181 | None:intergenic | 45.0% | |
| TCAGGATCGACATCCAATAC+AGG | + | Chr4:22934656-22934675 | None:intergenic | 45.0% | |
| TCGACAAAACAAAGCTCCTG+CGG | - | Chr4:22934708-22934727 | MsG0480019597.01.T01:CDS | 45.0% | |
| TGCCTTAGCAAAGGCTAAGA+AGG | - | Chr4:22934361-22934380 | MsG0480019597.01.T01:CDS | 45.0% | |
| TGCTGGGGTTCCTCATTATT+GGG | - | Chr4:22935780-22935799 | MsG0480019597.01.T01:CDS | 45.0% | |
| ! | AGCCTTCTTAGCCTTTGCTA+AGG | + | Chr4:22934366-22934385 | None:intergenic | 45.0% |
| ! | CTAAGGCATCACTACTAGAG+AGG | + | Chr4:22934349-22934368 | None:intergenic | 45.0% |
| ! | TGATGGTGTTAGCGTTGTCA+TGG | - | Chr4:22935540-22935559 | MsG0480019597.01.T01:CDS | 45.0% |
| ! | TTTCTGAGGGACAGTAACGT+CGG | + | Chr4:22934483-22934502 | None:intergenic | 45.0% |
| !! | ACGTACTTCCTTTTCAAGCC+GGG | + | Chr4:22935293-22935312 | None:intergenic | 45.0% |
| !! | GACGTACTTCCTTTTCAAGC+CGG | + | Chr4:22935294-22935313 | None:intergenic | 45.0% |
| AAGACGAAGAACAGGAGCCT+TGG | + | Chr4:22934510-22934529 | None:intergenic | 50.0% | |
| AAGCAACTCAAGATCCCACC+CGG | - | Chr4:22935272-22935291 | MsG0480019597.01.T01:CDS | 50.0% | |
| AATCGAAGCGCGATGAAGAG+AGG | - | Chr4:22934183-22934202 | MsG0480019597.01.T01:CDS | 50.0% | |
| AATTCATCCTCTTAGGCCGC+AGG | + | Chr4:22934727-22934746 | None:intergenic | 50.0% | |
| ACCCGATTCCGGATATTGAG+TGG | - | Chr4:22934939-22934958 | MsG0480019597.01.T01:CDS | 50.0% | |
| ACGTCCCACCACTCAATATC+CGG | + | Chr4:22934950-22934969 | None:intergenic | 50.0% | |
| AGCGTTGTCATGGTTGAAGG+TGG | - | Chr4:22935550-22935569 | MsG0480019597.01.T01:CDS | 50.0% | |
| AGGAAGCAGAGACAGGGATA+TGG | - | Chr4:22934118-22934137 | MsG0480019597.01.T01:CDS | 50.0% | |
| ATCGAAGCGCGATGAAGAGA+GGG | - | Chr4:22934184-22934203 | MsG0480019597.01.T01:CDS | 50.0% | |
| CGATTCCGGATATTGAGTGG+TGG | - | Chr4:22934942-22934961 | MsG0480019597.01.T01:CDS | 50.0% | |
| CTCGATACTCCTCGCATAAG+AGG | - | Chr4:22934213-22934232 | MsG0480019597.01.T01:CDS | 50.0% | |
| CTCGGTCTTCTCTGTGATTC+CGG | + | Chr4:22934097-22934116 | None:intergenic | 50.0% | |
| GAAAGAGAGGGTAGCAAAGG+TGG | - | Chr4:22934155-22934174 | MsG0480019597.01.T01:CDS | 50.0% | |
| GACAGGGATATGGGATACGA+TGG | - | Chr4:22934128-22934147 | MsG0480019597.01.T01:CDS | 50.0% | |
| GACGAAAGAGAGGGTAGCAA+AGG | - | Chr4:22934152-22934171 | MsG0480019597.01.T01:CDS | 50.0% | |
| GATTCCGGTCAGATCGATGA+TGG | + | Chr4:22934082-22934101 | None:intergenic | 50.0% | |
| GGAAGCAGAGACAGGGATAT+GGG | - | Chr4:22934119-22934138 | MsG0480019597.01.T01:CDS | 50.0% | |
| GTGAGCAGGCTCACATAGAT+AGG | - | Chr4:22935329-22935348 | MsG0480019597.01.T01:CDS | 50.0% | |
| TATGGTGACATTGCCGCCAA+CGG | - | Chr4:22934992-22935011 | MsG0480019597.01.T01:CDS | 50.0% | |
| TGTCCCTCAGAAACCAACCA+AGG | - | Chr4:22934490-22934509 | MsG0480019597.01.T01:CDS | 50.0% | |
| ! | GACCCAAAGGCGTATAGCTA+AGG | - | Chr4:22935156-22935175 | MsG0480019597.01.T01:CDS | 50.0% |
| ! | GGATGTGCGGTGATTTGTGA+TGG | - | Chr4:22935523-22935542 | MsG0480019597.01.T01:CDS | 50.0% |
| ! | TTCTGAGGGACAGTAACGTC+GGG | + | Chr4:22934482-22934501 | None:intergenic | 50.0% |
| ! | TTGATAGGTTGAGGTGGTGG+AGG | + | Chr4:22935106-22935125 | None:intergenic | 50.0% |
| !! | ACTTCCTTTTCAAGCCGGGT+GGG | + | Chr4:22935289-22935308 | None:intergenic | 50.0% |
| !! | ATAAACTCTAGAGCGGGCCT+TGG | + | Chr4:22935476-22935495 | None:intergenic | 50.0% |
| !! | ATGTTCGGAGTGTCGCCTAT+CGG | + | Chr4:22934009-22934028 | None:intergenic | 50.0% |
| !! | GAGCCTTGGTTGGTTTCTGA+GGG | + | Chr4:22934496-22934515 | None:intergenic | 50.0% |
| !! | GTTGGCTTGATAGGTTGAGG+TGG | + | Chr4:22935112-22935131 | None:intergenic | 50.0% |
| !! | TAAACTCTAGAGCGGGCCTT+GGG | + | Chr4:22935475-22935494 | None:intergenic | 50.0% |
| !! | TACTTCCTTTTCAAGCCGGG+TGG | + | Chr4:22935290-22935309 | None:intergenic | 50.0% |
| !! | TGATAGGTTGAGGTGGTGGA+GGG | + | Chr4:22935105-22935124 | None:intergenic | 50.0% |
| ACCGAGAAGGAAGCAGAGAC+AGG | - | Chr4:22934111-22934130 | MsG0480019597.01.T01:CDS | 55.0% | |
| ACCGCCATCATCGATCTGAC+CGG | - | Chr4:22934075-22934094 | MsG0480019597.01.T01:CDS | 55.0% | |
| ACCGTAACCATCACCGGAAC+CGG | - | Chr4:22934036-22934055 | MsG0480019597.01.T01:CDS | 55.0% | |
| CCCTGTCTCTGCTTCCTTCT+CGG | + | Chr4:22934115-22934134 | None:intergenic | 55.0% | |
| CCGAGAAGGAAGCAGAGACA+GGG | - | Chr4:22934112-22934131 | MsG0480019597.01.T01:CDS | 55.0% | |
| CGAAGAACAGGAGCCTTGGT+TGG | + | Chr4:22934506-22934525 | None:intergenic | 55.0% | |
| GACGTGGCACTTCTGCATTC+TGG | - | Chr4:22934965-22934984 | MsG0480019597.01.T01:CDS | 55.0% | |
| GGTGGTCATCAGAATCGTGC+CGG | + | Chr4:22934058-22934077 | None:intergenic | 55.0% | |
| GTTACGGTCGCGGTCATGTT+CGG | + | Chr4:22934024-22934043 | None:intergenic | 55.0% | |
| GTTCTTCGTCTTGACGCCCA+GGG | - | Chr4:22934518-22934537 | MsG0480019597.01.T01:CDS | 55.0% | |
| TGCTGAGCTGCGTGAGAAGA+AGG | - | Chr4:22935375-22935394 | MsG0480019597.01.T01:CDS | 55.0% | |
| TGGGCGTCAAGACGAAGAAC+AGG | + | Chr4:22934518-22934537 | None:intergenic | 55.0% | |
| TGTTCTTCGTCTTGACGCCC+AGG | - | Chr4:22934517-22934536 | MsG0480019597.01.T01:CDS | 55.0% | |
| TTCTTCTCACGCAGCTCAGC+AGG | + | Chr4:22935376-22935395 | None:intergenic | 55.0% | |
| ! | AGATCCCACCCGGCTTGAAA+AGG | - | Chr4:22935282-22935301 | MsG0480019597.01.T01:CDS | 55.0% |
| ! | GGATATTGAGTGGTGGGACG+TGG | - | Chr4:22934949-22934968 | MsG0480019597.01.T01:CDS | 55.0% |
| ! | GGCTTGATAGGTTGAGGTGG+TGG | + | Chr4:22935109-22935128 | None:intergenic | 55.0% |
| ! | TCCGGTCAGATCGATGATGG+CGG | + | Chr4:22934079-22934098 | None:intergenic | 55.0% |
| !! | CATCAGAATCGTGCCGGTTC+CGG | + | Chr4:22934052-22934071 | None:intergenic | 55.0% |
| !! | GATAGGTTGAGGTGGTGGAG+GGG | + | Chr4:22935104-22935123 | None:intergenic | 55.0% |
| !! | GGAGCCTTGGTTGGTTTCTG+AGG | + | Chr4:22934497-22934516 | None:intergenic | 55.0% |
| ACCGCGACCGTAACCATCAC+CGG | - | Chr4:22934030-22934049 | MsG0480019597.01.T01:CDS | 60.0% | |
| CAAAGCTCCTGCGGCCTAAG+AGG | - | Chr4:22934717-22934736 | MsG0480019597.01.T01:CDS | 60.0% | |
| GAAGCGCGATGAAGAGAGGG+AGG | - | Chr4:22934187-22934206 | MsG0480019597.01.T01:CDS | 60.0% | |
| GGCTCAGCAGGCGGTTCAAT+AGG | + | Chr4:22935079-22935098 | None:intergenic | 60.0% | |
| ! | GCCGGTTCCGGTGATGGTTA+CGG | + | Chr4:22934040-22934059 | None:intergenic | 60.0% |
| ! | TCCGGTGATGGTTACGGTCG+CGG | + | Chr4:22934034-22934053 | None:intergenic | 60.0% |
| !! | AATCGTGCCGGTTCCGGTGA+TGG | + | Chr4:22934046-22934065 | None:intergenic | 60.0% |
| !! | GGTCAGATCGATGATGGCGG+TGG | + | Chr4:22934076-22934095 | None:intergenic | 60.0% |
| AGCGGGCCTTGGGATGAGAG+AGG | + | Chr4:22935465-22935484 | None:intergenic | 65.0% | |
| GCAGGCGGTTCAATAGGCCG+AGG | + | Chr4:22935073-22935092 | None:intergenic | 65.0% | |
| TGCAGCTGCTGAGCGTGAGC+AGG | - | Chr4:22935315-22935334 | MsG0480019597.01.T01:CDS | 65.0% | |
| !! | AGGTTGAGGTGGTGGAGGGG+CGG | + | Chr4:22935101-22935120 | None:intergenic | 65.0% |
| !! | GGTTGAGGTGGTGGAGGGGC+GGG | + | Chr4:22935100-22935119 | None:intergenic | 70.0% |
| !! | GGAGGGGCGGGCTCAGCAGG+CGG | + | Chr4:22935088-22935107 | None:intergenic | 80.0% |
| !! | GGTGGAGGGGCGGGCTCAGC+AGG | + | Chr4:22935091-22935110 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr4 | gene | 22933987 | 22935840 | 22933987 | ID=MsG0480019597.01;Name=MsG0480019597.01 |
| Chr4 | mRNA | 22933987 | 22935840 | 22933987 | ID=MsG0480019597.01.T01;Parent=MsG0480019597.01;Name=MsG0480019597.01.T01;_AED=0.24;_eAED=0.25;_QI=0|-1|0|1|-1|1|1|0|617 |
| Chr4 | exon | 22933987 | 22935840 | 22933987 | ID=MsG0480019597.01.T01:exon:26505;Parent=MsG0480019597.01.T01 |
| Chr4 | CDS | 22933987 | 22935840 | 22933987 | ID=MsG0480019597.01.T01:cds;Parent=MsG0480019597.01.T01 |
| Gene Sequence |
| Protein sequence |
