AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480019833.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480019833.01.T01 MTR_8g099885 57.914 278 83 4 48 323 87 332 4.72e-88 286
MsG0480019833.01.T01 MTR_8g099885 87.075 147 17 2 375 520 586 731 3.66e-82 270
MsG0480019833.01.T01 MTR_0553s0050 70.492 61 18 0 1 61 1 61 4.26e-23 93.2
MsG0480019833.01.T01 MTR_4g031410 70.492 61 18 0 1 61 203 263 2.00e-22 97.4
MsG0480019833.01.T01 MTR_4g031755 70.492 61 18 0 1 61 203 263 2.00e-22 97.4
MsG0480019833.01.T01 MTR_6g075360 76.667 60 14 0 1 60 620 679 2.29e-22 101
MsG0480019833.01.T01 MTR_3g026170 63.333 60 22 0 4 63 51 110 3.60e-19 83.6
MsG0480019833.01.T01 MTR_3g448510 53.333 60 28 0 1 60 50 109 1.73e-18 81.6
MsG0480019833.01.T01 MTR_5g044650 63.636 55 20 0 7 61 148 202 3.21e-17 80.9
MsG0480019833.01.T01 MTR_7g031765 59.322 59 24 0 2 60 209 267 2.70e-16 79.7
MsG0480019833.01.T01 MTR_3g073030 54.237 59 27 0 2 60 12 70 6.76e-16 73.2
MsG0480019833.01.T01 MTR_6g023925 66.667 51 17 0 11 61 86 136 1.15e-15 74.7
MsG0480019833.01.T01 MTR_3g451330 58.333 48 20 0 2 49 1 48 5.35e-15 72.0
MsG0480019833.01.T01 MTR_5g059590 67.500 40 13 0 22 61 20 59 1.52e-14 68.9
MsG0480019833.01.T01 MTR_1g074290 67.391 46 15 0 15 60 107 152 8.30e-12 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480019833.01.T01 AT1G55090 51.504 266 88 6 60 323 106 332 6.34e-69 235
MsG0480019833.01.T01 AT1G55090 64.000 150 40 4 375 520 586 725 7.58e-56 199

Find 112 sgRNAs with CRISPR-Local

Find 517 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGCAGATAGATTGGCGAATA+TGG 0.096978 4:-28198695 MsG0480019833.01.T01:CDS
CAACATCATTTAAAGAAAAT+TGG 0.105248 4:+28195385 None:intergenic
CTATTTATTCAGACACTTTC+TGG 0.121885 4:-28192137 MsG0480019833.01.T01:intron
CATGCTGAGCTTGCATTAAA+TGG 0.156645 4:-28195774 MsG0480019833.01.T01:CDS
CATTACCCTCACGGTAAATA+TGG 0.159563 4:+28198722 None:intergenic
TACGAGGAACTATCAGTTTA+TGG 0.216917 4:-28191947 MsG0480019833.01.T01:CDS
GAACAGAAAGGCGTGATTTA+AGG 0.261931 4:+28195117 None:intergenic
TGGTCCAGTTTCCATGTTCC+AGG 0.285193 4:-28191900 MsG0480019833.01.T01:intron
CAAGATGGCCATATCAATTT+CGG 0.330547 4:-28191157 MsG0480019833.01.T01:CDS
ACGCCTTTCTGTTCCACTTA+AGG 0.332482 4:-28195108 MsG0480019833.01.T01:CDS
TGGTAGGTTGCAAGCCTTAG+AGG 0.340923 4:-28195227 MsG0480019833.01.T01:intron
ATTCGCCAGAGGATAATAAT+AGG 0.345748 4:-28191208 MsG0480019833.01.T01:CDS
CATGAAGGCTAGCACCATTC+TGG 0.356318 4:+28192848 None:intergenic
GTGTTATGCCAGTGATGGTT+TGG 0.370744 4:-28192111 MsG0480019833.01.T01:CDS
TGTGCCAGTGTTGTGGTAAA+TGG 0.371114 4:-28195429 MsG0480019833.01.T01:CDS
ATGCTGAGCTTGCATTAAAT+GGG 0.371833 4:-28195773 MsG0480019833.01.T01:CDS
GGAACATTGGCTTTACAAAC+TGG 0.384465 4:+28195179 None:intergenic
GCATAAGACCTCAGCATGAT+AGG 0.386169 4:+28191361 None:intergenic
AACATCATTTAAAGAAAATT+GGG 0.390775 4:+28195386 None:intergenic
TCCTCATGTTTCCGAAGCAT+TGG 0.392546 4:-28196287 MsG0480019833.01.T01:CDS
TATCAGTTTATGGAAGATTA+CGG 0.393634 4:-28191937 MsG0480019833.01.T01:CDS
GGAGTTGCTGCAGCAAGTTC+AGG 0.402010 4:-28191035 MsG0480019833.01.T01:CDS
CATCATTTGCAACCACATCT+TGG 0.403288 4:+28196377 None:intergenic
GTTTGGCTTATACAGGTAGA+TGG 0.414764 4:-28192918 MsG0480019833.01.T01:intron
ATCTTGTATTGTAGAGAAAC+TGG 0.415212 4:+28191174 None:intergenic
TATACCTGGAACATGGAAAC+TGG 0.415696 4:+28191896 None:intergenic
TGCTTGTCAACTTGGTGTTC+AGG 0.415953 4:-28198755 MsG0480019833.01.T01:CDS
CTTTACAAACTGGCTGCTCT+TGG 0.417186 4:+28195189 None:intergenic
AGCTGCTTATAGATCCTCTA+AGG 0.417993 4:+28195213 None:intergenic
AAATGGTGATGTTGTTGCTC+AGG 0.419683 4:-28195412 MsG0480019833.01.T01:CDS
TAATGTTTGCGCAGATAGAT+TGG 0.422212 4:-28198704 MsG0480019833.01.T01:CDS
TTTAAATGATGTTGAGGTTG+TGG 0.424124 4:-28195376 MsG0480019833.01.T01:CDS
GTCGTATCATAATAATCTTT+CGG 0.425212 4:+28196400 None:intergenic
ATCATTTGCAACCACATCTT+GGG 0.430824 4:+28196378 None:intergenic
TCAGATGGTGTTGGTGGGAT+GGG 0.432257 4:-28191056 MsG0480019833.01.T01:CDS
GACGATAAACTAACCTTAAG+TGG 0.442912 4:+28195095 None:intergenic
TAGTGTGATGAAGTTGATAT+TGG 0.444756 4:-28191977 MsG0480019833.01.T01:CDS
ATCAGATGGTGTTGGTGGGA+TGG 0.444784 4:-28191057 MsG0480019833.01.T01:CDS
CCTCATGTTTCCGAAGCATT+GGG 0.448181 4:-28196286 MsG0480019833.01.T01:CDS
CGGTTATGCTTCGTAATCGT+TGG 0.460893 4:-28198783 None:intergenic
TGTTATGCCAGTGATGGTTT+GGG 0.466203 4:-28192110 MsG0480019833.01.T01:CDS
AGGCGTGATTTAAGGTCAAA+AGG 0.471781 4:+28195125 None:intergenic
CGATGAACTCGTACATGAGC+TGG 0.481111 4:-28191129 MsG0480019833.01.T01:CDS
ACTCAGTCCAGGGAGCGGTT+TGG 0.484332 4:-28198669 MsG0480019833.01.T01:CDS
GAATATCAAGCTTTCTAAGT+TGG 0.484700 4:+28195718 None:intergenic
AGTTCAGGCAATTCAAATGT+TGG 0.486262 4:-28191020 MsG0480019833.01.T01:CDS
ATTACCCTCACGGTAAATAT+GGG 0.487951 4:+28198723 None:intergenic
AGGAAAGCCAAACCGCTCCC+TGG 0.488079 4:+28198662 None:intergenic
GTTGCAAATGATGGTAATTA+CGG 0.495152 4:-28196367 MsG0480019833.01.T01:CDS
AAAGGGAGACAGAGACAGTA+TGG 0.507115 4:+28195143 None:intergenic
TGGCACCATGCTTGTCAACT+TGG 0.510235 4:-28198763 MsG0480019833.01.T01:CDS
CATTTCACCCAAACCATCAC+TGG 0.511208 4:+28192103 None:intergenic
GAATATGGGACACTCAGTCC+AGG 0.519348 4:-28198680 MsG0480019833.01.T01:CDS
GCAGATAGATTGGCGAATAT+GGG 0.521091 4:-28198694 MsG0480019833.01.T01:CDS
TCAAACCTATTATTATCCTC+TGG 0.525889 4:+28191203 None:intergenic
TGATGGTTTGGGTGAAATGT+TGG 0.531858 4:-28192099 MsG0480019833.01.T01:CDS
CAAGATGTGGTTGCAAATGA+TGG 0.534027 4:-28196376 MsG0480019833.01.T01:CDS
GGTCTGTGTTATGCCAGTGA+TGG 0.534788 4:-28192116 MsG0480019833.01.T01:CDS
CTCAGAATCTGTGTTACAGA+TGG 0.536276 4:-28191478 MsG0480019833.01.T01:intron
AGGTGTAAGAAAGAATATGC+AGG 0.541419 4:+28195964 None:intergenic
TATCAAGCTTTCTAAGTTGG+TGG 0.542873 4:+28195721 None:intergenic
GCCTAAAAGAGGAGGAAGAG+AGG 0.543398 4:+28198642 None:intergenic
GGCGTGATTTAAGGTCAAAA+GGG 0.543959 4:+28195126 None:intergenic
TTAAACAAGCCATAACCAAA+AGG 0.544660 4:+28196250 None:intergenic
AGAACTTCGATGGTTACTGC+TGG 0.546730 4:-28196344 MsG0480019833.01.T01:CDS
TGTGTTACAGATGGAGTGTA+AGG 0.552039 4:-28191469 MsG0480019833.01.T01:CDS
GTTGCATCAGATGGTGTTGG+TGG 0.552808 4:-28191062 MsG0480019833.01.T01:CDS
TCACAAGATTACTGCATGCA+CGG 0.555930 4:+28195995 None:intergenic
CATTCAAGCTCGAACCAGAA+TGG 0.556501 4:-28192862 MsG0480019833.01.T01:intron
AAGAAATCAGAGCCTAAAAG+AGG 0.565118 4:+28198631 None:intergenic
AATGGTGATGTTGTTGCTCA+GGG 0.566496 4:-28195411 MsG0480019833.01.T01:CDS
CACAAGATTACTGCATGCAC+GGG 0.569064 4:+28195996 None:intergenic
CATGAGATATACCTGGAACA+TGG 0.570810 4:+28191889 None:intergenic
CAGTATGGTACATATACTAA+AGG 0.576446 4:+28195158 None:intergenic
TACATATACTAAAGGAACAT+TGG 0.582999 4:+28195166 None:intergenic
TCTTCCCATATTTACCGTGA+GGG 0.591952 4:-28198727 MsG0480019833.01.T01:CDS
TTGCATCAGATGGTGTTGGT+GGG 0.592195 4:-28191061 MsG0480019833.01.T01:CDS
ATGGTTACTGCTGGAAACAA+AGG 0.592774 4:-28196335 MsG0480019833.01.T01:CDS
GCAGTTGCATCAGATGGTGT+TGG 0.598921 4:-28191065 MsG0480019833.01.T01:CDS
GACACCTTCCTATCATGCTG+AGG 0.601210 4:-28191369 MsG0480019833.01.T01:intron
TAATGCAAGCTCAGCATGAG+GGG 0.602155 4:+28195779 None:intergenic
TAACCTTAAGTGGAACAGAA+AGG 0.603482 4:+28195105 None:intergenic
GTAATTACGGAGAACTTCGA+TGG 0.605565 4:-28196354 MsG0480019833.01.T01:CDS
CTCTTCCCATATTTACCGTG+AGG 0.606007 4:-28198728 MsG0480019833.01.T01:CDS
GGGACACTCAGTCCAGGGAG+CGG 0.607529 4:-28198674 MsG0480019833.01.T01:CDS
AAGACCTCAGCATGATAGGA+AGG 0.608575 4:+28191365 None:intergenic
TTTAATGCAAGCTCAGCATG+AGG 0.609788 4:+28195777 None:intergenic
ATGCAACTGCCACTGTCACA+TGG 0.611905 4:+28191078 None:intergenic
ATCACCATTTACCACAACAC+TGG 0.613885 4:+28195425 None:intergenic
TGGCTTATACAGGTAGATGG+TGG 0.617590 4:-28192915 MsG0480019833.01.T01:intron
AAATCAGAGCCTAAAAGAGG+AGG 0.626627 4:+28198634 None:intergenic
TTATGATACGACCCAAGATG+TGG 0.627140 4:-28196389 MsG0480019833.01.T01:CDS
TTAATGCAAGCTCAGCATGA+GGG 0.627773 4:+28195778 None:intergenic
AGTTTCTCTACAATACAAGA+TGG 0.629035 4:-28191172 MsG0480019833.01.T01:CDS
TGCTGAGCTTGCATTAAATG+GGG 0.634241 4:-28195772 MsG0480019833.01.T01:CDS
ACAGTGGCAGTTGCATCAGA+TGG 0.634417 4:-28191071 MsG0480019833.01.T01:CDS
ATCAGCAAACCATGTGACAG+TGG 0.635974 4:-28191087 MsG0480019833.01.T01:CDS
CTGCGCAAACATTACCCTCA+CGG 0.639258 4:+28198713 None:intergenic
AAACGCCTCAAGAGTATGAG+TGG 0.641090 4:+28195674 None:intergenic
AATATGGGACACTCAGTCCA+GGG 0.645187 4:-28198679 MsG0480019833.01.T01:CDS
AGGTGCCACTCATACTCTTG+AGG 0.645328 4:-28195679 MsG0480019833.01.T01:CDS
AGATGGATGTGCCAGTGTTG+TGG 0.652300 4:-28195436 MsG0480019833.01.T01:CDS
CCCAATGCTTCGGAAACATG+AGG 0.652367 4:+28196286 None:intergenic
AGCATGATAGGAAGGTGTCA+AGG 0.654248 4:+28191373 None:intergenic
CGTCCAGAGTTATTCGCCAG+AGG 0.661953 4:-28191219 MsG0480019833.01.T01:intron
TGCTCAGATAGATCTAGATG+TGG 0.662474 4:-28195352 MsG0480019833.01.T01:intron
AATGCAAGCTCAGCATGAGG+GGG 0.672892 4:+28195780 None:intergenic
GAACACCAAGTTGACAAGCA+TGG 0.678519 4:+28198758 None:intergenic
GTTGTGTTTATGAATGCAAG+CGG 0.703412 4:-28195750 MsG0480019833.01.T01:CDS
ATGATAGGAAGGTGTCAAGG+TGG 0.706059 4:+28191376 None:intergenic
AATGCTTCGGAAACATGAGG+AGG 0.712342 4:+28196289 None:intergenic
TGATATTGGAATGACTTACG+AGG 0.739198 4:-28191963 MsG0480019833.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATGATATATCAATATAAAA+AGG + Chr4:28194647-28194666 None:intergenic 10.0%
!!! ATGTGTTTAATTTATTTTTT+TGG - Chr4:28193675-28193694 MsG0480019833.01.T01:intron 10.0%
!!! CAAAATTTTATTAAAAAAAG+GGG + Chr4:28191105-28191124 None:intergenic 10.0%
!!! CTCAAAATTTTATTAAAAAA+AGG + Chr4:28191107-28191126 None:intergenic 10.0%
!!! CTTTTTTTAATAAAATTTTG+AGG - Chr4:28191105-28191124 MsG0480019833.01.T01:CDS 10.0%
!!! TATATTGTTTTGTTTTATTA+GGG + Chr4:28198611-28198630 None:intergenic 10.0%
!!! TGTGTTTAATTTATTTTTTT+GGG - Chr4:28193676-28193695 MsG0480019833.01.T01:intron 10.0%
!!! TTATATTGTTTTGTTTTATT+AGG + Chr4:28198612-28198631 None:intergenic 10.0%
!! AACATCATTTAAAGAAAATT+GGG + Chr4:28194201-28194220 None:intergenic 15.0%
!! AATATTATTACTGTGTTTAT+GGG - Chr4:28195736-28195755 MsG0480019833.01.T01:CDS 15.0%
!! ATAAAAAAAAGAAAAAAGCT+CGG + Chr4:28194606-28194625 None:intergenic 15.0%
!! ATGTAATTAGATATGATTAA+GGG + Chr4:28192994-28193013 None:intergenic 15.0%
!! TATAAATTGCTTTATGTTTA+TGG + Chr4:28194307-28194326 None:intergenic 15.0%
!!! AAACAAATAAATTAGTTTCA+TGG + Chr4:28191288-28191307 None:intergenic 15.0%
!!! ATATTGTTTTGTTTTATTAG+GGG + Chr4:28198610-28198629 None:intergenic 15.0%
!!! TAAATTTTTTTTAGCTGAAT+CGG + Chr4:28191209-28191228 None:intergenic 15.0%
!!! TATAAAAAGGATTTAGAATT+TGG + Chr4:28194634-28194653 None:intergenic 15.0%
!!! TGTTTTAAAAGAATTAACTA+CGG - Chr4:28191303-28191322 MsG0480019833.01.T01:intron 15.0%
!!! TTTTAATAAAATTTTGAGGT+TGG - Chr4:28191109-28191128 MsG0480019833.01.T01:CDS 15.0%
!! AAAACATTCTAAGCTAATAA+AGG + Chr4:28195426-28195445 None:intergenic 20.0%
!! AAATACAATAATGCAAAACA+AGG + Chr4:28197758-28197777 None:intergenic 20.0%
!! AATAATCTTTGAGTATAAGT+TGG + Chr4:28193707-28193726 None:intergenic 20.0%
!! AATACAATAATGCAAAACAA+GGG + Chr4:28197757-28197776 None:intergenic 20.0%
!! ACAAAAATAAAGTGTGAATT+TGG + Chr4:28193378-28193397 None:intergenic 20.0%
!! ACACTATTCAATAAAAAATG+AGG + Chr4:28197593-28197612 None:intergenic 20.0%
!! ACTCACATAAATTTAATAAG+AGG + Chr4:28195960-28195979 None:intergenic 20.0%
!! ATTGTAGTTACTAATAGATA+CGG + Chr4:28197564-28197583 None:intergenic 20.0%
!! CAAAGATAAAACATAACTAA+GGG + Chr4:28195887-28195906 None:intergenic 20.0%
!! CAACATCATTTAAAGAAAAT+TGG + Chr4:28194202-28194221 None:intergenic 20.0%
!! CACTATTCAATAAAAAATGA+GGG + Chr4:28197592-28197611 None:intergenic 20.0%
!! GAAAGGAAATTTGAATATTT+AGG + Chr4:28195362-28195381 None:intergenic 20.0%
!! GAATATTATTACTGTGTTTA+TGG - Chr4:28195735-28195754 MsG0480019833.01.T01:CDS 20.0%
!! GATGTAATTAGATATGATTA+AGG + Chr4:28192995-28193014 None:intergenic 20.0%
!! TAAAGCAATTTATATCAGAT+TGG - Chr4:28194313-28194332 MsG0480019833.01.T01:intron 20.0%
!! TAAGGAAGATTATGAAATTT+CGG + Chr4:28191411-28191430 None:intergenic 20.0%
!! TCTTATTAAATTTATGTGAG+TGG - Chr4:28195959-28195978 MsG0480019833.01.T01:CDS 20.0%
!! TGTTTGAAAGATATATTGAT+TGG - Chr4:28193074-28193093 MsG0480019833.01.T01:intron 20.0%
!!! AAATTTTTTTTAGCTGAATC+GGG + Chr4:28191208-28191227 None:intergenic 20.0%
!!! AAGTCGATATGATATAATTT+TGG + Chr4:28191699-28191718 None:intergenic 20.0%
!!! AGAAGTCAACAAATTTTAAA+AGG + Chr4:28197429-28197448 None:intergenic 20.0%
!!! AGTTATTATGATTTAAAGTC+AGG - Chr4:28198246-28198265 MsG0480019833.01.T01:intron 20.0%
!!! ATCATTGTTATTCCTAAATA+AGG + Chr4:28195027-28195046 None:intergenic 20.0%
!!! ATTCATGTTTTTTCATATTC+AGG - Chr4:28194016-28194035 MsG0480019833.01.T01:intron 20.0%
!!! ATTTTCTTTAAATGATGTTG+AGG - Chr4:28194202-28194221 MsG0480019833.01.T01:intron 20.0%
!!! GTTATTATGATTTAAAGTCA+GGG - Chr4:28198247-28198266 MsG0480019833.01.T01:intron 20.0%
!!! TCTCTTTCATTTACAATTTT+TGG - Chr4:28195519-28195538 MsG0480019833.01.T01:intron 20.0%
!!! TTCATTTTATTTGTAACAGA+TGG - Chr4:28194131-28194150 MsG0480019833.01.T01:intron 20.0%
! AAAAAATATGTACAAAGAGG+GGG + Chr4:28191082-28191101 None:intergenic 25.0%
! AAACTAAAAGAGAAACTAAG+TGG + Chr4:28197111-28197130 None:intergenic 25.0%
! AAACTAATTGACCCAATAAA+AGG + Chr4:28196151-28196170 None:intergenic 25.0%
! AAAGAATTAACTACGGATAA+TGG - Chr4:28191310-28191329 MsG0480019833.01.T01:intron 25.0%
! AACTAATAGATCAGTGTTAA+AGG + Chr4:28197535-28197554 None:intergenic 25.0%
! AATCAATGAAATAGTACAAC+AGG + Chr4:28193492-28193511 None:intergenic 25.0%
! ACTAATAGATCAGTGTTAAA+GGG + Chr4:28197534-28197553 None:intergenic 25.0%
! AGTGTAAAGATCTAAAAGAA+GGG - Chr4:28195085-28195104 MsG0480019833.01.T01:CDS 25.0%
! ATTAACCAGTGATTCATATT+TGG - Chr4:28195609-28195628 MsG0480019833.01.T01:intron 25.0%
! ATTTCTCATTATAATGTCGA+AGG - Chr4:28197774-28197793 MsG0480019833.01.T01:intron 25.0%
! CCAAAGATAAAACATAACTA+AGG + Chr4:28195888-28195907 None:intergenic 25.0%
! CTTTATGTTTATGGTCAAAA+TGG + Chr4:28194298-28194317 None:intergenic 25.0%
! GAAAAAATATGTACAAAGAG+GGG + Chr4:28191083-28191102 None:intergenic 25.0%
! GCAAAACAAAAACAGAAAAA+AGG + Chr4:28191024-28191043 None:intergenic 25.0%
! GGAAAAAATATGTACAAAGA+GGG + Chr4:28191084-28191103 None:intergenic 25.0%
! GTCGTATCATAATAATCTTT+CGG + Chr4:28193187-28193206 None:intergenic 25.0%
! GTGCGGTTATAAATATTTAA+AGG - Chr4:28191597-28191616 MsG0480019833.01.T01:intron 25.0%
! GTTAATATTAACATACTCTG+TGG + Chr4:28196484-28196503 None:intergenic 25.0%
! TAAGTACATAAAATCTGCAA+CGG - Chr4:28191756-28191775 MsG0480019833.01.T01:intron 25.0%
! TACATATACTAAAGGAACAT+TGG + Chr4:28194421-28194440 None:intergenic 25.0%
! TATAAAATTCTTAACGAGTG+CGG - Chr4:28191580-28191599 MsG0480019833.01.T01:intron 25.0%
! TATCAGTTTATGGAAGATTA+CGG - Chr4:28197647-28197666 MsG0480019833.01.T01:intron 25.0%
! TATTAATATCTCAAATAGCC+AGG + Chr4:28192970-28192989 None:intergenic 25.0%
! TCAATAGAAGCTTGTATTTA+AGG - Chr4:28198038-28198057 MsG0480019833.01.T01:intron 25.0%
! TGTAAATGAAAGAGAAAAAG+AGG + Chr4:28195514-28195533 None:intergenic 25.0%
! TTATACTTTCAGTACTTACA+AGG - Chr4:28197360-28197379 MsG0480019833.01.T01:intron 25.0%
! TTTCTCATTATAATGTCGAA+GGG - Chr4:28197775-28197794 MsG0480019833.01.T01:intron 25.0%
!! AAGATATATTGATTGGTGAT+TGG - Chr4:28193081-28193100 MsG0480019833.01.T01:intron 25.0%
!! AGTTTTTCATTAGATCTTGT+TGG - Chr4:28192157-28192176 MsG0480019833.01.T01:intron 25.0%
!! ATCTCATGAAATCCTTTTAT+TGG - Chr4:28196136-28196155 MsG0480019833.01.T01:intron 25.0%
!! CAAACATTGATGAAGTATTA+TGG + Chr4:28195852-28195871 None:intergenic 25.0%
!! CCTTAGTTATGTTTTATCTT+TGG - Chr4:28195885-28195904 MsG0480019833.01.T01:intron 25.0%
!! TAAGAAGAACTTGATAACTA+GGG + Chr4:28197156-28197175 None:intergenic 25.0%
!! TACCATGTTTTCAATTGATA+TGG - Chr4:28197933-28197952 MsG0480019833.01.T01:intron 25.0%
!! TATCATAGGATTCCTTATTT+AGG - Chr4:28195012-28195031 MsG0480019833.01.T01:intron 25.0%
!! TCTCATGAAATCCTTTTATT+GGG - Chr4:28196137-28196156 MsG0480019833.01.T01:intron 25.0%
!!! AAATATGTTCCTTTTGGTTA+TGG - Chr4:28193325-28193344 MsG0480019833.01.T01:intron 25.0%
!!! CTTTTTTCAGAACTAAGATT+AGG - Chr4:28196600-28196619 MsG0480019833.01.T01:intron 25.0%
!!! GCAAATCATGAGTTTTAATA+AGG + Chr4:28191429-28191448 None:intergenic 25.0%
!!! GTTCTTCATTTTAGCTTTTT+AGG + Chr4:28192886-28192905 None:intergenic 25.0%
!!! GTTGATTAATTCTAAAGTTG+AGG - Chr4:28192504-28192523 MsG0480019833.01.T01:intron 25.0%
!!! TAATAAAATTTTGAGGTTGG+CGG - Chr4:28191112-28191131 MsG0480019833.01.T01:CDS 25.0%
!!! TCATTTACAATTTTTGGAAG+TGG - Chr4:28195525-28195544 MsG0480019833.01.T01:intron 25.0%
!!! TCTGCTTCGTATATTTTTAT+TGG - Chr4:28198313-28198332 MsG0480019833.01.T01:intron 25.0%
!!! TTCATTTTAGCTTTTTAGGA+GGG + Chr4:28192882-28192901 None:intergenic 25.0%
!!! TTGAAGAAGTGTTTACTTTT+CGG + Chr4:28198159-28198178 None:intergenic 25.0%
!!! TTTGTTTTCACTTTGTTTCT+TGG - Chr4:28196968-28196987 MsG0480019833.01.T01:intron 25.0%
AAAAATATGTACAAAGAGGG+GGG + Chr4:28191081-28191100 None:intergenic 30.0%
AAATCAAGATGTCCTTATAC+CGG + Chr4:28194045-28194064 None:intergenic 30.0%
AAGTACATAAAATCTGCAAC+GGG - Chr4:28191757-28191776 MsG0480019833.01.T01:intron 30.0%
AAGTATGATCGAACTCAAAA+TGG + Chr4:28198068-28198087 None:intergenic 30.0%
AATAACACATGCATGTAATG+TGG - Chr4:28192729-28192748 MsG0480019833.01.T01:intron 30.0%
AATGAAATAGTACAACAGGT+GGG + Chr4:28193488-28193507 None:intergenic 30.0%
AATTGATATGGAGAGCTTAA+CGG - Chr4:28197945-28197964 MsG0480019833.01.T01:intron 30.0%
ACAAAAACAGAAAAAAGGCA+AGG + Chr4:28191019-28191038 None:intergenic 30.0%
ACTGCAGTTAGATTAAATTG+TGG - Chr4:28194915-28194934 MsG0480019833.01.T01:intron 30.0%
AGAAGATATAGTAACAGTTC+CGG + Chr4:28195187-28195206 None:intergenic 30.0%
AGAATCGGAAACTATAAGAA+TGG - Chr4:28195678-28195697 MsG0480019833.01.T01:CDS 30.0%
AGATAAAACATAACTAAGGG+AGG + Chr4:28195884-28195903 None:intergenic 30.0%
AGCAATTAGCATACTATCAT+AGG - Chr4:28194998-28195017 MsG0480019833.01.T01:intron 30.0%
AGCATAGCATACGAATATAA+AGG - Chr4:28192186-28192205 MsG0480019833.01.T01:intron 30.0%
AGTATGATCGAACTCAAAAT+GGG + Chr4:28198067-28198086 None:intergenic 30.0%
AGTTTCTCTACAATACAAGA+TGG - Chr4:28198412-28198431 MsG0480019833.01.T01:intron 30.0%
ATCTTGTATTGTAGAGAAAC+TGG + Chr4:28198413-28198432 None:intergenic 30.0%
ATGAGAAATGGAAACTTTGA+AGG + Chr4:28194945-28194964 None:intergenic 30.0%
ATGTGATAGTCGATATGATA+AGG + Chr4:28191498-28191517 None:intergenic 30.0%
ATTGGAATGCCTATTATCAA+AGG - Chr4:28193125-28193144 MsG0480019833.01.T01:intron 30.0%
ATTGTTGCTAGTATTACGAA+TGG + Chr4:28192484-28192503 None:intergenic 30.0%
CAGTATGGTACATATACTAA+AGG + Chr4:28194429-28194448 None:intergenic 30.0%
CAGTGTAAAGATCTAAAAGA+AGG - Chr4:28195084-28195103 MsG0480019833.01.T01:CDS 30.0%
CTAAAATGAAGAACCCAATT+GGG - Chr4:28192892-28192911 MsG0480019833.01.T01:CDS 30.0%
CTAATAGATCAGTGTTAAAG+GGG + Chr4:28197533-28197552 None:intergenic 30.0%
CTAGTATTACGAATGGTTAA+CGG + Chr4:28192477-28192496 None:intergenic 30.0%
CTATTTATTCAGACACTTTC+TGG - Chr4:28197447-28197466 MsG0480019833.01.T01:intron 30.0%
CTCCATATCAATTGAAAACA+TGG + Chr4:28197938-28197957 None:intergenic 30.0%
GAATATCAAGCTTTCTAAGT+TGG + Chr4:28193869-28193888 None:intergenic 30.0%
GATATTTAAGCAAGCCTAAA+TGG + Chr4:28194068-28194087 None:intergenic 30.0%
GATGCTGATGCATATTATAA+GGG + Chr4:28193569-28193588 None:intergenic 30.0%
GCATAGCATACGAATATAAA+GGG - Chr4:28192187-28192206 MsG0480019833.01.T01:intron 30.0%
GCATTGCATGCATTTAAATA+CGG + Chr4:28194271-28194290 None:intergenic 30.0%
GGGAAAAAATATGTACAAAG+AGG + Chr4:28191085-28191104 None:intergenic 30.0%
GTCAATTGTCATTCCATTAA+GGG + Chr4:28193996-28194015 None:intergenic 30.0%
GTTGCAAATGATGGTAATTA+CGG - Chr4:28193217-28193236 MsG0480019833.01.T01:intron 30.0%
TAAAATGAAGAACCCAATTG+GGG - Chr4:28192893-28192912 MsG0480019833.01.T01:CDS 30.0%
TAACACAGATCATTGTATCA+GGG - Chr4:28196533-28196552 MsG0480019833.01.T01:intron 30.0%
TAAGCTGATGCAATAAGAAT+CGG - Chr4:28195663-28195682 MsG0480019833.01.T01:intron 30.0%
TAATGTGACTTGAGATTACA+CGG + Chr4:28197898-28197917 None:intergenic 30.0%
TCAAACCTATTATTATCCTC+TGG + Chr4:28198384-28198403 None:intergenic 30.0%
TGAACTTACAAATTCAAACC+TGG - Chr4:28195573-28195592 MsG0480019833.01.T01:intron 30.0%
TGAATGTAGTTAGAACGTAT+CGG + Chr4:28197325-28197344 None:intergenic 30.0%
TGAGTGAGATTACTACAATA+AGG + Chr4:28192242-28192261 None:intergenic 30.0%
TGATGCATATTATAAGGGTT+GGG + Chr4:28193564-28193583 None:intergenic 30.0%
TGTCAATTGTCATTCCATTA+AGG + Chr4:28193997-28194016 None:intergenic 30.0%
TTAAACAAGCCATAACCAAA+AGG + Chr4:28193337-28193356 None:intergenic 30.0%
TTAACACAGATCATTGTATC+AGG - Chr4:28196532-28196551 MsG0480019833.01.T01:intron 30.0%
TTCATCAATGTTTGTATGAG+AGG - Chr4:28195858-28195877 MsG0480019833.01.T01:intron 30.0%
TTTAAATGATGTTGAGGTTG+TGG - Chr4:28194208-28194227 MsG0480019833.01.T01:intron 30.0%
TTTACACTGCTGATACTTAA+CGG + Chr4:28195073-28195092 None:intergenic 30.0%
! AATTACAGCTCATTGATAGT+TGG + Chr4:28195289-28195308 None:intergenic 30.0%
! ACATTTTCCTACCATAGTAA+AGG + Chr4:28193972-28193991 None:intergenic 30.0%
! AGCATGTTTTACACTAAACA+TGG + Chr4:28198724-28198743 None:intergenic 30.0%
! ATGTAGCCTCATATTTTCTA+TGG - Chr4:28196644-28196663 MsG0480019833.01.T01:intron 30.0%
! ATTTCTTTAGAGACAGATGT+GGG - Chr4:28190969-28190988 MsG0480019833.01.T01:three_prime_UTR 30.0%
! CACGTTAAATATGTGTGTTT+TGG + Chr4:28192783-28192802 None:intergenic 30.0%
! GCATGTTTTACACTAAACAT+GGG + Chr4:28198723-28198742 None:intergenic 30.0%
! GGACAAAAATATGTTCCTTT+TGG - Chr4:28193319-28193338 MsG0480019833.01.T01:intron 30.0%
! GTAAGAAGAACTTGATAACT+AGG + Chr4:28197157-28197176 None:intergenic 30.0%
! TCGATTTTCCGAAATTGATA+TGG + Chr4:28198438-28198457 None:intergenic 30.0%
! TGAGGTATTAACTTTAGAAG+AGG + Chr4:28192709-28192728 None:intergenic 30.0%
! TTATCTTTGGCCTTTATGTA+TGG - Chr4:28195898-28195917 MsG0480019833.01.T01:intron 30.0%
! TTTGTTGTCCTAAAAAGAAC+TGG - Chr4:28197085-28197104 MsG0480019833.01.T01:intron 30.0%
!! AACTCATGATTTGCTTAATG+TGG - Chr4:28191435-28191454 MsG0480019833.01.T01:CDS 30.0%
!! ATATTTTTGTCCCAATGCTT+CGG + Chr4:28193311-28193330 None:intergenic 30.0%
!! TAGTGTGATGAAGTTGATAT+TGG - Chr4:28197607-28197626 MsG0480019833.01.T01:intron 30.0%
!! TTACATGCATGTGTTATTTG+AGG + Chr4:28192727-28192746 None:intergenic 30.0%
!!! CTTCATTTTAGCTTTTTAGG+AGG + Chr4:28192883-28192902 None:intergenic 30.0%
!!! CTTTTAGTTTCTCATGTTTG+TGG - Chr4:28197121-28197140 MsG0480019833.01.T01:intron 30.0%
!!! TCTAGCACTCACTTTTTATT+AGG + Chr4:28192655-28192674 None:intergenic 30.0%
!!! TTGTTTTGTTTTATTAGGGG+AGG + Chr4:28198607-28198626 None:intergenic 30.0%
!!! TTTGCTGTTTCTTTTTGCTT+CGG - Chr4:28191039-28191058 MsG0480019833.01.T01:CDS 30.0%
!!! TTTTTTCATATTCAGGAAGC+CGG - Chr4:28194023-28194042 MsG0480019833.01.T01:intron 30.0%
AAACCAATCAGCATTGTTCA+AGG + Chr4:28195985-28196004 None:intergenic 35.0%
AACTCATATTTCACCCCAAT+TGG + Chr4:28192909-28192928 None:intergenic 35.0%
AACTTAAAGAGACACAACCA+AGG + Chr4:28195810-28195829 None:intergenic 35.0%
AAGAAATCAGAGCCTAAAAG+AGG + Chr4:28190956-28190975 None:intergenic 35.0%
AAGGCTAAAAACACACCAAA+GGG + Chr4:28195215-28195234 None:intergenic 35.0%
AATAATGCAAAACAAGGGAG+AGG + Chr4:28197752-28197771 None:intergenic 35.0%
ACAGAAAAAAGGCAAGGTTA+CGG + Chr4:28191013-28191032 None:intergenic 35.0%
ACGAAGCAGACAAAATCTTT+AGG + Chr4:28198303-28198322 None:intergenic 35.0%
ACTACAATAAGGATCGTTTG+TGG + Chr4:28192231-28192250 None:intergenic 35.0%
ACTCATATTTCACCCCAATT+GGG + Chr4:28192908-28192927 None:intergenic 35.0%
AGGTGTAAGAAAGAATATGC+AGG + Chr4:28193623-28193642 None:intergenic 35.0%
AGTTCAGGCAATTCAAATGT+TGG - Chr4:28198564-28198583 MsG0480019833.01.T01:intron 35.0%
ATCACCGAGAAAAAAAGTCA+TGG - Chr4:28196198-28196217 MsG0480019833.01.T01:intron 35.0%
ATCATTTGCAACCACATCTT+GGG + Chr4:28193209-28193228 None:intergenic 35.0%
ATGCTGAGCTTGCATTAAAT+GGG - Chr4:28193811-28193830 MsG0480019833.01.T01:intron 35.0%
ATTACCCTCACGGTAAATAT+GGG + Chr4:28190864-28190883 None:intergenic 35.0%
ATTCGCCAGAGGATAATAAT+AGG - Chr4:28198376-28198395 MsG0480019833.01.T01:intron 35.0%
CAAATTCAAACCTGGTAGTT+TGG - Chr4:28195581-28195600 MsG0480019833.01.T01:intron 35.0%
CAAGATGGCCATATCAATTT+CGG - Chr4:28198427-28198446 MsG0480019833.01.T01:intron 35.0%
CAATGAAATAGTACAACAGG+TGG + Chr4:28193489-28193508 None:intergenic 35.0%
CGAAGCAGACAAAATCTTTA+GGG + Chr4:28198302-28198321 None:intergenic 35.0%
CTCAGCAGTATAAATCCTAT+TGG - Chr4:28197190-28197209 MsG0480019833.01.T01:intron 35.0%
CTGATGCATATTATAAGGGT+TGG + Chr4:28193565-28193584 None:intergenic 35.0%
CTTAACGGAATCAGAATTAG+TGG + Chr4:28195058-28195077 None:intergenic 35.0%
CTTAGCTTAGTCTCTTTATG+GGG - Chr4:28196570-28196589 MsG0480019833.01.T01:intron 35.0%
GAACTTCATCTTTGAATGCT+AGG - Chr4:28196105-28196124 MsG0480019833.01.T01:intron 35.0%
GAAGCAGACAAAATCTTTAG+GGG + Chr4:28198301-28198320 None:intergenic 35.0%
GACGATAAACTAACCTTAAG+TGG + Chr4:28194492-28194511 None:intergenic 35.0%
GATAAAATATCACTCTCCTG+AGG - Chr4:28194727-28194746 MsG0480019833.01.T01:intron 35.0%
GATAACATAGTGTGCAGTAT+TGG - Chr4:28193107-28193126 MsG0480019833.01.T01:intron 35.0%
GATACGTTCTAACTACATTC+AGG - Chr4:28197324-28197343 MsG0480019833.01.T01:intron 35.0%
GATAGTCGATATGATAAGGA+AGG + Chr4:28191494-28191513 None:intergenic 35.0%
GCATAAACATGAGATATACC+TGG + Chr4:28197705-28197724 None:intergenic 35.0%
GCCAAACCATAGAAAATATG+AGG + Chr4:28196653-28196672 None:intergenic 35.0%
GCTAAAATGAAGAACCCAAT+TGG - Chr4:28192891-28192910 MsG0480019833.01.T01:CDS 35.0%
GCTTAGCTTAGTCTCTTTAT+GGG - Chr4:28196569-28196588 MsG0480019833.01.T01:intron 35.0%
GGACATCTTGATTTCCATTT+AGG - Chr4:28194051-28194070 MsG0480019833.01.T01:intron 35.0%
GGATGCTGATGCATATTATA+AGG + Chr4:28193570-28193589 None:intergenic 35.0%
GTAATGTTACGCTTTCGTAT+AGG - Chr4:28192094-28192113 MsG0480019833.01.T01:CDS 35.0%
GTAGGAAAATGTTCCCTTAA+TGG - Chr4:28193980-28193999 MsG0480019833.01.T01:intron 35.0%
GTTGTGTTTATGAATGCAAG+CGG - Chr4:28193834-28193853 MsG0480019833.01.T01:intron 35.0%
TAACCTTAAGTGGAACAGAA+AGG + Chr4:28194482-28194501 None:intergenic 35.0%
TAATGTTTGCGCAGATAGAT+TGG - Chr4:28190880-28190899 MsG0480019833.01.T01:three_prime_UTR 35.0%
TACGAGGAACTATCAGTTTA+TGG - Chr4:28197637-28197656 MsG0480019833.01.T01:intron 35.0%
TACTTGCAATCTGAACCAAT+GGG - Chr4:28192316-28192335 MsG0480019833.01.T01:intron 35.0%
TCAATGTAGAACCTACACTT+TGG + Chr4:28192627-28192646 None:intergenic 35.0%
TCATTATAATGTCGAAGGGT+TGG - Chr4:28197779-28197798 MsG0480019833.01.T01:intron 35.0%
TCATTGTTCCAAACACTTAC+TGG - Chr4:28196342-28196361 MsG0480019833.01.T01:CDS 35.0%
TCGACACATCATAGATTACA+CGG + Chr4:28196442-28196461 None:intergenic 35.0%
TCTGTGGAAAAAACTAAGTG+TGG + Chr4:28196468-28196487 None:intergenic 35.0%
TGAAGATGCATGTATGATGA+AGG - Chr4:28194553-28194572 MsG0480019833.01.T01:intron 35.0%
TGAAGCCAAATATGAATCAC+TGG + Chr4:28195617-28195636 None:intergenic 35.0%
TGATATTGGAATGACTTACG+AGG - Chr4:28197621-28197640 MsG0480019833.01.T01:intron 35.0%
TGATTGACGGCAGAATTAAT+TGG - Chr4:28195327-28195346 MsG0480019833.01.T01:intron 35.0%
TGCTCAATAACCAATTTCCA+CGG - Chr4:28191258-28191277 MsG0480019833.01.T01:intron 35.0%
TGCTTAGCTTAGTCTCTTTA+TGG - Chr4:28196568-28196587 MsG0480019833.01.T01:intron 35.0%
TGGCTTCAGAAATTGCAAAT+GGG - Chr4:28195629-28195648 MsG0480019833.01.T01:intron 35.0%
TTAGATCTCTCTCAAATACC+TGG - Chr4:28192949-28192968 MsG0480019833.01.T01:intron 35.0%
TTGAGATGGAGTCTTTGATT+TGG + Chr4:28192367-28192386 None:intergenic 35.0%
TTGGCTTCAGAAATTGCAAA+TGG - Chr4:28195628-28195647 MsG0480019833.01.T01:intron 35.0%
! ACTTGATAACTAGGGTGTAA+TGG + Chr4:28197148-28197167 None:intergenic 35.0%
! ATTAGTTTCATGGTTATCCG+TGG + Chr4:28191278-28191297 None:intergenic 35.0%
! ATTCGTCTTCGTGCTTTTAT+AGG - Chr4:28193885-28193904 MsG0480019833.01.T01:intron 35.0%
! CTCTCAGAACCTTTGATAAT+AGG + Chr4:28193137-28193156 None:intergenic 35.0%
! GATTTCTTTAGAGACAGATG+TGG - Chr4:28190968-28190987 MsG0480019833.01.T01:three_prime_UTR 35.0%
! GCCTCATATTTTCTATGGTT+TGG - Chr4:28196649-28196668 MsG0480019833.01.T01:intron 35.0%
! TAGAACCTACACTTTGGAAA+TGG + Chr4:28192621-28192640 None:intergenic 35.0%
! TATCAAGCTTTCTAAGTTGG+TGG + Chr4:28193866-28193885 None:intergenic 35.0%
! TTACGGAAAACTTTTCGTTG+TGG - Chr4:28197664-28197683 MsG0480019833.01.T01:intron 35.0%
! TTCTATGGTTTGGCTTATAC+AGG - Chr4:28196659-28196678 MsG0480019833.01.T01:intron 35.0%
! TTCTGAGAGATACAATTGTC+AGG - Chr4:28193148-28193167 MsG0480019833.01.T01:intron 35.0%
! TTTTGCAAGACTTTCGAGAA+AGG + Chr4:28195379-28195398 None:intergenic 35.0%
!! AGCTTTTTAGGAGGGAAAAT+TGG + Chr4:28192874-28192893 None:intergenic 35.0%
!! GTCTTTGATTTGGTTGGTAT+TGG + Chr4:28192357-28192376 None:intergenic 35.0%
!! TACAATTTTTGGAAGTGGCA+GGG - Chr4:28195530-28195549 MsG0480019833.01.T01:intron 35.0%
!! TCTAGTGTTTTTACGATCCT+TGG - Chr4:28195790-28195809 MsG0480019833.01.T01:CDS 35.0%
!! TTACAATTTTTGGAAGTGGC+AGG - Chr4:28195529-28195548 MsG0480019833.01.T01:intron 35.0%
!!! GTTCGAACATGCTACTTTTT+AGG + Chr4:28193643-28193662 None:intergenic 35.0%
!!! TGACTTTTTTTCTCGGTGAT+TGG + Chr4:28196198-28196217 None:intergenic 35.0%
AAATCAGAGCCTAAAAGAGG+AGG + Chr4:28190953-28190972 None:intergenic 40.0%
ACATAAAATCTGCAACGGGT+GGG - Chr4:28191761-28191780 MsG0480019833.01.T01:intron 40.0%
ACCAGTAGACAAACGAGTAA+AGG + Chr4:28194341-28194360 None:intergenic 40.0%
AGATACTCCTTAAGGGAAAG+CGG + Chr4:28194579-28194598 None:intergenic 40.0%
AGATGAGTAACCAAGATGGA+TGG + Chr4:28197260-28197279 None:intergenic 40.0%
AGCTGCTTATAGATCCTCTA+AGG + Chr4:28194374-28194393 None:intergenic 40.0%
AGTACCAGAGCCATACATAA+AGG + Chr4:28195911-28195930 None:intergenic 40.0%
ATATTCAGGAAGCCGGTATA+AGG - Chr4:28194030-28194049 MsG0480019833.01.T01:intron 40.0%
ATCACCATTTACCACAACAC+TGG + Chr4:28194162-28194181 None:intergenic 40.0%
ATCTTTGAATGCTTTCGCAC+GGG + Chr4:28193424-28193443 None:intergenic 40.0%
ATCTTTGTACTTATCCCCCA+AGG + Chr4:28195258-28195277 None:intergenic 40.0%
ATGGTTACTGCTGGAAACAA+AGG - Chr4:28193249-28193268 MsG0480019833.01.T01:intron 40.0%
CAAGATGTGGTTGCAAATGA+TGG - Chr4:28193208-28193227 MsG0480019833.01.T01:intron 40.0%
CAATCATCAAGCTGTAATGG+TGG - Chr4:28193943-28193962 MsG0480019833.01.T01:intron 40.0%
CACATTTCGGTGGTTATTTG+AGG + Chr4:28192841-28192860 None:intergenic 40.0%
CAGCAATCATCAAGCTGTAA+TGG - Chr4:28193940-28193959 MsG0480019833.01.T01:intron 40.0%
CATCATTTGCAACCACATCT+TGG + Chr4:28193210-28193229 None:intergenic 40.0%
CATCTTTGAATGCTTTCGCA+CGG + Chr4:28193425-28193444 None:intergenic 40.0%
CATGAGATATACCTGGAACA+TGG + Chr4:28197698-28197717 None:intergenic 40.0%
CATGCTGAGCTTGCATTAAA+TGG - Chr4:28193810-28193829 MsG0480019833.01.T01:intron 40.0%
CATTACCCTCACGGTAAATA+TGG + Chr4:28190865-28190884 None:intergenic 40.0%
CCAAAGATGAGTAACCAAGA+TGG + Chr4:28197264-28197283 None:intergenic 40.0%
CCATCTTGGTTACTCATCTT+TGG - Chr4:28197261-28197280 MsG0480019833.01.T01:intron 40.0%
CTAAAAGAAGGGTAGTGAAG+AGG - Chr4:28195096-28195115 MsG0480019833.01.T01:CDS 40.0%
CTACTTGCAATCTGAACCAA+TGG - Chr4:28192315-28192334 MsG0480019833.01.T01:intron 40.0%
CTCAAATAACCACCGAAATG+TGG - Chr4:28192839-28192858 MsG0480019833.01.T01:intron 40.0%
CTCAGAATCTGTGTTACAGA+TGG - Chr4:28198106-28198125 MsG0480019833.01.T01:intron 40.0%
CTGACTGATGAAATGTTTCC+TGG - Chr4:28196277-28196296 MsG0480019833.01.T01:CDS 40.0%
CTTGGGTTCACAAAAAACCT+GGG - Chr4:28196777-28196796 MsG0480019833.01.T01:intron 40.0%
GAAATGGAACCCACATAAAG+TGG + Chr4:28192605-28192624 None:intergenic 40.0%
GAAGGCTAAAAACACACCAA+AGG + Chr4:28195216-28195235 None:intergenic 40.0%
GAGATTGAACAAGCATCAAG+AGG + Chr4:28191186-28191205 None:intergenic 40.0%
GCAGATAGATTGGCGAATAT+GGG - Chr4:28190890-28190909 MsG0480019833.01.T01:three_prime_UTR 40.0%
GCGAATTCTCTACTGTCTAT+AGG + Chr4:28195710-28195729 None:intergenic 40.0%
GGGGATAAGTACAAAGATCA+TGG - Chr4:28195260-28195279 MsG0480019833.01.T01:intron 40.0%
GGTTACGGAAACCTATAGTT+AGG + Chr4:28190998-28191017 None:intergenic 40.0%
GTAATTACGGAGAACTTCGA+TGG - Chr4:28193230-28193249 MsG0480019833.01.T01:intron 40.0%
GTTAAAGAAGTCAGCAAGAC+AGG + Chr4:28197730-28197749 None:intergenic 40.0%
TACATAAAATCTGCAACGGG+TGG - Chr4:28191760-28191779 MsG0480019833.01.T01:intron 40.0%
TATACCTGGAACATGGAAAC+TGG + Chr4:28197691-28197710 None:intergenic 40.0%
TATATCTTCTCACCACCCTT+TGG - Chr4:28195197-28195216 MsG0480019833.01.T01:CDS 40.0%
TATGTCCCACCACTTTATGT+GGG - Chr4:28192593-28192612 MsG0480019833.01.T01:intron 40.0%
TATTGGCAGTATAAGTACGC+AGG - Chr4:28197207-28197226 MsG0480019833.01.T01:intron 40.0%
TCAAACATTCCCATCTGCAA+CGG + Chr4:28193061-28193080 None:intergenic 40.0%
TCACAAGATTACTGCATGCA+CGG + Chr4:28193592-28193611 None:intergenic 40.0%
TCATGGTTATCCGTGGAAAT+TGG + Chr4:28191271-28191290 None:intergenic 40.0%
TCCTGAGGAGAAATAGCATT+TGG - Chr4:28194742-28194761 MsG0480019833.01.T01:intron 40.0%
TCCTTTACTCGTTTGTCTAC+TGG - Chr4:28194337-28194356 MsG0480019833.01.T01:intron 40.0%
TCTTCCCATATTTACCGTGA+GGG - Chr4:28190857-28190876 MsG0480019833.01.T01:three_prime_UTR 40.0%
TGCGTACTTATACTGCCAAT+AGG + Chr4:28197208-28197227 None:intergenic 40.0%
TGCTCAGATAGATCTAGATG+TGG - Chr4:28194232-28194251 MsG0480019833.01.T01:intron 40.0%
TGCTGAGCTTGCATTAAATG+GGG - Chr4:28193812-28193831 MsG0480019833.01.T01:intron 40.0%
TGGGACTATTTACGAAGAAG+TGG - Chr4:28194781-28194800 MsG0480019833.01.T01:intron 40.0%
TGTGTTACAGATGGAGTGTA+AGG - Chr4:28198115-28198134 MsG0480019833.01.T01:intron 40.0%
TGTTATGCCAGTGATGGTTT+GGG - Chr4:28197474-28197493 MsG0480019833.01.T01:intron 40.0%
TTAATGACGTCCAAACTACC+AGG + Chr4:28195594-28195613 None:intergenic 40.0%
TTAATGCAAGCTCAGCATGA+GGG + Chr4:28193809-28193828 None:intergenic 40.0%
TTACTCGTTTGTCTACTGGT+AGG - Chr4:28194341-28194360 MsG0480019833.01.T01:intron 40.0%
TTATGATACGACCCAAGATG+TGG - Chr4:28193195-28193214 MsG0480019833.01.T01:intron 40.0%
TTTAATGCAAGCTCAGCATG+AGG + Chr4:28193810-28193829 None:intergenic 40.0%
! AAATGGTGATGTTGTTGCTC+AGG - Chr4:28194172-28194191 MsG0480019833.01.T01:intron 40.0%
! AATGGTGATGTTGTTGCTCA+GGG - Chr4:28194173-28194192 MsG0480019833.01.T01:intron 40.0%
! ACCATTTTGTCCTAGAGATG+AGG - Chr4:28192280-28192299 MsG0480019833.01.T01:intron 40.0%
! AGGCGTGATTTAAGGTCAAA+AGG + Chr4:28194462-28194481 None:intergenic 40.0%
! CACATAGTGTCGAAATGTTG+TGG - Chr4:28196029-28196048 MsG0480019833.01.T01:intron 40.0%
! CTAAGTGGCCAGTTCTTTTT+AGG + Chr4:28197096-28197115 None:intergenic 40.0%
! GAACAGAAAGGCGTGATTTA+AGG + Chr4:28194470-28194489 None:intergenic 40.0%
! GGCGTGATTTAAGGTCAAAA+GGG + Chr4:28194461-28194480 None:intergenic 40.0%
! GTTTGGCTTATACAGGTAGA+TGG - Chr4:28196666-28196685 MsG0480019833.01.T01:intron 40.0%
! TGATGGTTTGGGTGAAATGT+TGG - Chr4:28197485-28197504 MsG0480019833.01.T01:intron 40.0%
!! ACAATTTTTGGAAGTGGCAG+GGG - Chr4:28195531-28195550 MsG0480019833.01.T01:intron 40.0%
!! ACCTGGGTTTTATCTTGTCT+TGG - Chr4:28196793-28196812 MsG0480019833.01.T01:intron 40.0%
!! AGCTGCAATAGCTCTAAGAA+GGG + Chr4:28193754-28193773 None:intergenic 40.0%
!! CCTGGGTTTTATCTTGTCTT+GGG - Chr4:28196794-28196813 MsG0480019833.01.T01:intron 40.0%
!! CTGGGTTTTATCTTGTCTTG+GGG - Chr4:28196795-28196814 MsG0480019833.01.T01:intron 40.0%
!! CTGTTTCTTTTTGCTTCGGA+GGG - Chr4:28191043-28191062 MsG0480019833.01.T01:CDS 40.0%
!! GATGGAGTCTTTGATTTGGT+TGG + Chr4:28192363-28192382 None:intergenic 40.0%
!! GGAACATTGGCTTTACAAAC+TGG + Chr4:28194408-28194427 None:intergenic 40.0%
!! TCCAAATGCTATTTCTCCTC+AGG + Chr4:28194746-28194765 None:intergenic 40.0%
!! TGTCACGAGTTGATGAGAAA+TGG + Chr4:28194957-28194976 None:intergenic 40.0%
!! TTACTTTTCGGCACTTGTGA+TGG + Chr4:28198147-28198166 None:intergenic 40.0%
!!! TGCGCCATGACTTTTTTTCT+CGG + Chr4:28196205-28196224 None:intergenic 40.0%
AAAGGGAGACAGAGACAGTA+TGG + Chr4:28194444-28194463 None:intergenic 45.0%
AAATGTTTCCTGGCACCTAG+AGG - Chr4:28196287-28196306 MsG0480019833.01.T01:CDS 45.0%
AAGACCTCAGCATGATAGGA+AGG + Chr4:28198222-28198241 None:intergenic 45.0%
AAGAGGAGCAGAAAACCAGA+TGG + Chr4:28194808-28194827 None:intergenic 45.0%
AATAGTACAACAGGTGGGTC+TGG + Chr4:28193483-28193502 None:intergenic 45.0%
AATATGGGACACTCAGTCCA+GGG - Chr4:28190905-28190924 MsG0480019833.01.T01:three_prime_UTR 45.0%
AATCGAACTCCATAGCCCAT+TGG + Chr4:28192334-28192353 None:intergenic 45.0%
AATGCAGATGAAGGGTTACG+TGG - Chr4:28196824-28196843 MsG0480019833.01.T01:intron 45.0%
AATGCTTCGGAAACATGAGG+AGG + Chr4:28193298-28193317 None:intergenic 45.0%
AATGGTGGTCGCCTTTACTA+TGG - Chr4:28193958-28193977 MsG0480019833.01.T01:intron 45.0%
ACACTGTTTCCGTTGCAGAT+GGG - Chr4:28193049-28193068 MsG0480019833.01.T01:intron 45.0%
ACGCCTTTCTGTTCCACTTA+AGG - Chr4:28194476-28194495 MsG0480019833.01.T01:intron 45.0%
ACGTAACCCTTCATCTGCAT+TGG + Chr4:28196825-28196844 None:intergenic 45.0%
AGAACTTCGATGGTTACTGC+TGG - Chr4:28193240-28193259 MsG0480019833.01.T01:intron 45.0%
AGAAGAGGACGCTAACATGA+AGG + Chr4:28196754-28196773 None:intergenic 45.0%
ATAAAATCTGCAACGGGTGG+GGG - Chr4:28191763-28191782 MsG0480019833.01.T01:intron 45.0%
ATAGTACAACAGGTGGGTCT+GGG + Chr4:28193482-28193501 None:intergenic 45.0%
ATCAGCAAACCATGTGACAG+TGG - Chr4:28198497-28198516 MsG0480019833.01.T01:intron 45.0%
ATGGAACCCACATAAAGTGG+TGG + Chr4:28192602-28192621 None:intergenic 45.0%
ATGTGTCAGCTGGTTGTGAA+AGG - Chr4:28194873-28194892 MsG0480019833.01.T01:intron 45.0%
ATTCCAACCTTGTACCTTGG+GGG - Chr4:28195241-28195260 MsG0480019833.01.T01:intron 45.0%
CACAAGATTACTGCATGCAC+GGG + Chr4:28193591-28193610 None:intergenic 45.0%
CATAAAATCTGCAACGGGTG+GGG - Chr4:28191762-28191781 MsG0480019833.01.T01:intron 45.0%
CATTCAAGCTCGAACCAGAA+TGG - Chr4:28196722-28196741 MsG0480019833.01.T01:intron 45.0%
CATTTCACCCAAACCATCAC+TGG + Chr4:28197484-28197503 None:intergenic 45.0%
CATTTCATCAGTCAGCCCTT+TGG + Chr4:28196272-28196291 None:intergenic 45.0%
CCAGCTGTTTGGATTTGAGA+TGG + Chr4:28192381-28192400 None:intergenic 45.0%
CCATCTCAAATCCAAACAGC+TGG - Chr4:28192378-28192397 MsG0480019833.01.T01:intron 45.0%
CCCAAGACAAGATAAAACCC+AGG + Chr4:28196797-28196816 None:intergenic 45.0%
CCGCACATCTAACTGATTGA+CGG - Chr4:28195314-28195333 MsG0480019833.01.T01:intron 45.0%
CCGTCAATCAGTTAGATGTG+CGG + Chr4:28195317-28195336 None:intergenic 45.0%
CCTTCAAAAGCCTCATCTCT+AGG + Chr4:28192293-28192312 None:intergenic 45.0%
CCTTGGGTTCACAAAAAACC+TGG - Chr4:28196776-28196795 MsG0480019833.01.T01:intron 45.0%
CGCAGATAGATTGGCGAATA+TGG - Chr4:28190889-28190908 MsG0480019833.01.T01:three_prime_UTR 45.0%
CGGAACCAGATACTCCTTAA+GGG + Chr4:28194586-28194605 None:intergenic 45.0%
CTCTTCCCATATTTACCGTG+AGG - Chr4:28190856-28190875 MsG0480019833.01.T01:three_prime_UTR 45.0%
CTTGCAGTTCGAAAATGACG+AGG - Chr4:28196239-28196258 MsG0480019833.01.T01:CDS 45.0%
CTTTACAAACTGGCTGCTCT+TGG + Chr4:28194398-28194417 None:intergenic 45.0%
GATGTGGGCTTCCTAACTAT+AGG - Chr4:28190984-28191003 MsG0480019833.01.T01:three_prime_UTR 45.0%
GATTCCAACCTTGTACCTTG+GGG - Chr4:28195240-28195259 MsG0480019833.01.T01:intron 45.0%
GCATAAGACCTCAGCATGAT+AGG + Chr4:28198226-28198245 None:intergenic 45.0%
GCTAAAAACACACCAAAGGG+TGG + Chr4:28195212-28195231 None:intergenic 45.0%
GGATTCCAACCTTGTACCTT+GGG - Chr4:28195239-28195258 MsG0480019833.01.T01:intron 45.0%
GGGTTCCATTTCCAAAGTGT+AGG - Chr4:28192613-28192632 MsG0480019833.01.T01:intron 45.0%
GTATAAGTACGCAGGACCTT+CGG - Chr4:28197215-28197234 MsG0480019833.01.T01:intron 45.0%
GTATGTCCCACCACTTTATG+TGG - Chr4:28192592-28192611 MsG0480019833.01.T01:intron 45.0%
GTCGCATTCCAGTAAGTGTT+TGG + Chr4:28196353-28196372 None:intergenic 45.0%
GTGTTATGCCAGTGATGGTT+TGG - Chr4:28197473-28197492 MsG0480019833.01.T01:intron 45.0%
TAATGCAAGCTCAGCATGAG+GGG + Chr4:28193808-28193827 None:intergenic 45.0%
TACTTATCCCCCAAGGTACA+AGG + Chr4:28195251-28195270 None:intergenic 45.0%
TAGTCCCATAAACAGCAAGC+AGG + Chr4:28194769-28194788 None:intergenic 45.0%
TATAAGTACGCAGGACCTTC+GGG - Chr4:28197216-28197235 MsG0480019833.01.T01:intron 45.0%
TATCCTCTGGCGAATAACTC+TGG + Chr4:28198371-28198390 None:intergenic 45.0%
TCCTCATGTTTCCGAAGCAT+TGG - Chr4:28193297-28193316 MsG0480019833.01.T01:intron 45.0%
TCGGAACCAGATACTCCTTA+AGG + Chr4:28194587-28194606 None:intergenic 45.0%
TGCAACGGAAACAGTGTGAA+CGG + Chr4:28193046-28193065 None:intergenic 45.0%
TGGAACCCACATAAAGTGGT+GGG + Chr4:28192601-28192620 None:intergenic 45.0%
TGGATACCTCGTCCACATTT+CGG + Chr4:28192854-28192873 None:intergenic 45.0%
TGGCTTATACAGGTAGATGG+TGG - Chr4:28196669-28196688 MsG0480019833.01.T01:intron 45.0%
TGTGCCAGTGTTGTGGTAAA+TGG - Chr4:28194155-28194174 MsG0480019833.01.T01:intron 45.0%
! AAACGCCTCAAGAGTATGAG+TGG + Chr4:28193913-28193932 None:intergenic 45.0%
! AGCTAGAGATTCCCGGTTTT+GGG - Chr4:28192422-28192441 MsG0480019833.01.T01:intron 45.0%
! CCTAGAGATGAGGCTTTTGA+AGG - Chr4:28192290-28192309 MsG0480019833.01.T01:intron 45.0%
! CCTCATGTTTCCGAAGCATT+GGG - Chr4:28193298-28193317 MsG0480019833.01.T01:intron 45.0%
! CTTTTTGCTTCGGAGGGTTT+TGG - Chr4:28191049-28191068 MsG0480019833.01.T01:CDS 45.0%
! GAACACCAAGTTGACAAGCA+TGG + Chr4:28190829-28190848 None:intergenic 45.0%
! TCCTCTCTTCCTCCTCTTTT+AGG - Chr4:28190941-28190960 MsG0480019833.01.T01:three_prime_UTR 45.0%
! TGGCCTTGAACAATGCTGAT+TGG - Chr4:28195979-28195998 MsG0480019833.01.T01:CDS 45.0%
! TGGTTTTCTGCTCCTCTTTC+TGG - Chr4:28194810-28194829 MsG0480019833.01.T01:intron 45.0%
! TTGGCCTTTATGTATGGCTC+TGG - Chr4:28195904-28195923 MsG0480019833.01.T01:intron 45.0%
! TTTTCTGCTCCTCTTTCTGG+TGG - Chr4:28194813-28194832 MsG0480019833.01.T01:intron 45.0%
!! AGCATGATAGGAAGGTGTCA+AGG + Chr4:28198214-28198233 None:intergenic 45.0%
!! ATGATAGGAAGGTGTCAAGG+TGG + Chr4:28198211-28198230 None:intergenic 45.0%
!! CAATCTGAACCAATGGGCTA+TGG - Chr4:28192322-28192341 MsG0480019833.01.T01:intron 45.0%
!! CAGCTGCAATAGCTCTAAGA+AGG + Chr4:28193755-28193774 None:intergenic 45.0%
!! CCTCTGTTTCTGCGATTGTT+GGG - Chr4:28194847-28194866 MsG0480019833.01.T01:intron 45.0%
!! CTCGTCATTTTCGAACTGCA+AGG + Chr4:28196241-28196260 None:intergenic 45.0%
!! GCCTCATCTCTAGGACAAAA+TGG + Chr4:28192284-28192303 None:intergenic 45.0%
!! GCTGCAATAGCTCTAAGAAG+GGG + Chr4:28193753-28193772 None:intergenic 45.0%
!! GCTTTCCCTTAAGGAGTATC+TGG - Chr4:28194578-28194597 MsG0480019833.01.T01:intron 45.0%
!! TCCTCTGTTTCTGCGATTGT+TGG - Chr4:28194846-28194865 MsG0480019833.01.T01:intron 45.0%
!! TGCTTGTCAACTTGGTGTTC+AGG - Chr4:28190829-28190848 MsG0480019833.01.T01:three_prime_UTR 45.0%
!! TGGACCTGCTTGCTGTTTAT+GGG - Chr4:28194762-28194781 MsG0480019833.01.T01:intron 45.0%
!! TTGCATCAGATGGTGTTGGT+GGG - Chr4:28198523-28198542 MsG0480019833.01.T01:intron 45.0%
!! TTGGACCTGCTTGCTGTTTA+TGG - Chr4:28194761-28194780 MsG0480019833.01.T01:intron 45.0%
!!! CCAGGTTTTTTGTGAACCCA+AGG + Chr4:28196779-28196798 None:intergenic 45.0%
!!! GCTGTTTCTTTTTGCTTCGG+AGG - Chr4:28191042-28191061 MsG0480019833.01.T01:CDS 45.0%
!!! GGTGTGTTTTTAGCCTTCGT+GGG - Chr4:28195218-28195237 MsG0480019833.01.T01:CDS 45.0%
!!! TGGTGTGTTTTTAGCCTTCG+TGG - Chr4:28195217-28195236 MsG0480019833.01.T01:CDS 45.0%
!!! TCAAAATTTTATTAAAAAAA+GGG + Chr4:28191106-28191125 None:intergenic 5.0%
!!! TGTTTTTTAAAAATTAATTA+CGG - Chr4:28191231-28191250 MsG0480019833.01.T01:intron 5.0%
AATGCAAGCTCAGCATGAGG+GGG + Chr4:28193807-28193826 None:intergenic 50.0%
ACAAGGTTGGAATCCCACGA+AGG + Chr4:28195234-28195253 None:intergenic 50.0%
ACAGTGGCAGTTGCATCAGA+TGG - Chr4:28198513-28198532 MsG0480019833.01.T01:intron 50.0%
AGATGGATGTGCCAGTGTTG+TGG - Chr4:28194148-28194167 MsG0480019833.01.T01:intron 50.0%
ATACCTCGTCCACATTTCGG+TGG + Chr4:28192851-28192870 None:intergenic 50.0%
ATGCAACTGCCACTGTCACA+TGG + Chr4:28198509-28198528 None:intergenic 50.0%
ATGTACAAAGAGGGGGGACT+AGG + Chr4:28191075-28191094 None:intergenic 50.0%
CACACTGTTTCCGTTGCAGA+TGG - Chr4:28193048-28193067 MsG0480019833.01.T01:intron 50.0%
CATGAAGGCTAGCACCATTC+TGG + Chr4:28196739-28196758 None:intergenic 50.0%
CCCAACAATCGCAGAAACAG+AGG + Chr4:28194850-28194869 None:intergenic 50.0%
CCCAATGCTTCGGAAACATG+AGG + Chr4:28193301-28193320 None:intergenic 50.0%
CGATGAACTCGTACATGAGC+TGG - Chr4:28198455-28198474 MsG0480019833.01.T01:intron 50.0%
CTCCATCAATGCTGACCTCT+AGG + Chr4:28196305-28196324 None:intergenic 50.0%
CTGCGCAAACATTACCCTCA+CGG + Chr4:28190874-28190893 None:intergenic 50.0%
GAATATGGGACACTCAGTCC+AGG - Chr4:28190904-28190923 MsG0480019833.01.T01:three_prime_UTR 50.0%
GACACCTTCCTATCATGCTG+AGG - Chr4:28198215-28198234 MsG0480019833.01.T01:intron 50.0%
GCAGTTGCATCAGATGGTGT+TGG - Chr4:28198519-28198538 MsG0480019833.01.T01:intron 50.0%
GCCTAAAAGAGGAGGAAGAG+AGG + Chr4:28190945-28190964 None:intergenic 50.0%
GCTACAGGGTAACTGAAGCA+TGG - Chr4:28196376-28196395 MsG0480019833.01.T01:CDS 50.0%
GGGATTCCAACCTTGTACCT+TGG - Chr4:28195238-28195257 MsG0480019833.01.T01:intron 50.0%
GGTCTGTGTTATGCCAGTGA+TGG - Chr4:28197468-28197487 MsG0480019833.01.T01:intron 50.0%
GTCAAGGATGAACCCAATGG+AGG + Chr4:28195142-28195161 None:intergenic 50.0%
GTGGTCGCCTTTACTATGGT+AGG - Chr4:28193962-28193981 MsG0480019833.01.T01:intron 50.0%
GTTACGTGGCAACTTGACGA+AGG - Chr4:28196838-28196857 MsG0480019833.01.T01:intron 50.0%
TAACCACCGAAATGTGGACG+AGG - Chr4:28192845-28192864 MsG0480019833.01.T01:intron 50.0%
TAGCGTCCTCTTCTTGCCTT+GGG - Chr4:28196760-28196779 MsG0480019833.01.T01:intron 50.0%
TATCCCCCAAGGTACAAGGT+TGG + Chr4:28195247-28195266 None:intergenic 50.0%
TGACCTGAGCTAGAGATTCC+CGG - Chr4:28192415-28192434 MsG0480019833.01.T01:intron 50.0%
TGGCACCATGCTTGTCAACT+TGG - Chr4:28190821-28190840 MsG0480019833.01.T01:three_prime_UTR 50.0%
TGGTAGGTTGCAAGCCTTAG+AGG - Chr4:28194357-28194376 MsG0480019833.01.T01:intron 50.0%
TGGTCCAGTTTCCATGTTCC+AGG - Chr4:28197684-28197703 MsG0480019833.01.T01:intron 50.0%
TGTGAACCCAAGGCAAGAAG+AGG + Chr4:28196769-28196788 None:intergenic 50.0%
TGTTGGGTGTATGTGTCAGC+TGG - Chr4:28194863-28194882 MsG0480019833.01.T01:intron 50.0%
TTAGCGTCCTCTTCTTGCCT+TGG - Chr4:28196759-28196778 MsG0480019833.01.T01:intron 50.0%
! AAACCGGGAATCTCTAGCTC+AGG + Chr4:28192421-28192440 None:intergenic 50.0%
! ATGAAGGCCGCTTTCCCTTA+AGG - Chr4:28194569-28194588 MsG0480019833.01.T01:intron 50.0%
! CACCTAGAGGTCAGCATTGA+TGG - Chr4:28196300-28196319 MsG0480019833.01.T01:CDS 50.0%
! GAGCTAGAGATTCCCGGTTT+TGG - Chr4:28192421-28192440 MsG0480019833.01.T01:intron 50.0%
! GGAGCACCAATGCAGATGAA+GGG - Chr4:28196816-28196835 MsG0480019833.01.T01:intron 50.0%
! GTTGCATCAGATGGTGTTGG+TGG - Chr4:28198522-28198541 MsG0480019833.01.T01:intron 50.0%
!! AGGTGCCACTCATACTCTTG+AGG - Chr4:28193905-28193924 MsG0480019833.01.T01:intron 50.0%
!! ATCAGATGGTGTTGGTGGGA+TGG - Chr4:28198527-28198546 MsG0480019833.01.T01:intron 50.0%
!! CGGTGTCAAGCTCTAAGAAG+TGG + Chr4:28192457-28192476 None:intergenic 50.0%
!! TCAGATGGTGTTGGTGGGAT+GGG - Chr4:28198528-28198547 MsG0480019833.01.T01:intron 50.0%
AAACGCCGACCCAACTAGGT+TGG + Chr4:28191163-28191182 None:intergenic 55.0%
AACAGCCTGGCTCCTCCATT+GGG - Chr4:28195127-28195146 MsG0480019833.01.T01:CDS 55.0%
AATGCTGACCTCTAGGTGCC+AGG + Chr4:28196298-28196317 None:intergenic 55.0%
ACCTTCGGGCATTCCTGAGA+TGG - Chr4:28197230-28197249 MsG0480019833.01.T01:intron 55.0%
AGAGGCCACATGTAACAGCC+TGG - Chr4:28195114-28195133 MsG0480019833.01.T01:CDS 55.0%
AGATGGGCAGCCATCCATCT+TGG - Chr4:28197247-28197266 MsG0480019833.01.T01:intron 55.0%
AGGAGCCAGGCTGTTACATG+TGG + Chr4:28195122-28195141 None:intergenic 55.0%
ATGAACCCAATGGAGGAGCC+AGG + Chr4:28195135-28195154 None:intergenic 55.0%
ATGACGAGGTTGCGAGCCAA+AGG - Chr4:28196253-28196272 MsG0480019833.01.T01:CDS 55.0%
ATTCCAGTAGCCCAGCTCAG+CGG + Chr4:28195164-28195183 None:intergenic 55.0%
CCTTCGGGCATTCCTGAGAT+GGG - Chr4:28197231-28197250 MsG0480019833.01.T01:intron 55.0%
CGTCCAGAGTTATTCGCCAG+AGG - Chr4:28198365-28198384 MsG0480019833.01.T01:intron 55.0%
CTGATACAGCGCCAGCTGTT+TGG + Chr4:28192392-28192411 None:intergenic 55.0%
GCGGTCAAGGATGAACCCAA+TGG + Chr4:28195145-28195164 None:intergenic 55.0%
GCTTCAGTTACCCTGTAGCG+TGG + Chr4:28196375-28196394 None:intergenic 55.0%
GGAGTTGCTGCAGCAAGTTC+AGG - Chr4:28198549-28198568 MsG0480019833.01.T01:intron 55.0%
TAACAGCCTGGCTCCTCCAT+TGG - Chr4:28195126-28195145 MsG0480019833.01.T01:CDS 55.0%
TCATCCTTGACCGCTGAGCT+GGG - Chr4:28195151-28195170 MsG0480019833.01.T01:CDS 55.0%
TGACGAGGTTGCGAGCCAAA+GGG - Chr4:28196254-28196273 MsG0480019833.01.T01:CDS 55.0%
TGAGCTGGGCTACTGGAATC+CGG - Chr4:28195165-28195184 MsG0480019833.01.T01:CDS 55.0%
TGGAATGCGACCACGCTACA+GGG - Chr4:28196362-28196381 MsG0480019833.01.T01:CDS 55.0%
TTCATCCTTGACCGCTGAGC+TGG - Chr4:28195150-28195169 MsG0480019833.01.T01:CDS 55.0%
! TGCTCCTCTTTCTGGTGGAG+CGG - Chr4:28194818-28194837 MsG0480019833.01.T01:intron 55.0%
!! ATCGGCTCGAGTTCAGCTGT+GGG + Chr4:28197307-28197326 None:intergenic 55.0%
!! GGGAGCACCAATGCAGATGA+AGG - Chr4:28196815-28196834 MsG0480019833.01.T01:intron 55.0%
!! TATCGGCTCGAGTTCAGCTG+TGG + Chr4:28197308-28197327 None:intergenic 55.0%
ACTCAGTCCAGGGAGCGGTT+TGG - Chr4:28190915-28190934 MsG0480019833.01.T01:three_prime_UTR 60.0%
AGCTCAGCATGAGGGGGAGA+TGG + Chr4:28193801-28193820 None:intergenic 60.0%
AGGAAAGCCAAACCGCTCCC+TGG + Chr4:28190925-28190944 None:intergenic 60.0%
CAGACGATGGAGGTTTCCCG+GGG - Chr4:28191135-28191154 MsG0480019833.01.T01:CDS 60.0%
CCCATCTCAGGAATGCCCGA+AGG + Chr4:28197234-28197253 None:intergenic 60.0%
CGAGTTCAGCTGTGGGTGGA+GGG + Chr4:28197300-28197319 None:intergenic 60.0%
CTGGAATGCGACCACGCTAC+AGG - Chr4:28196361-28196380 MsG0480019833.01.T01:CDS 60.0%
CTGTCCGCTCCACCAGAAAG+AGG + Chr4:28194825-28194844 None:intergenic 60.0%
GAGGAAACGCCGACCCAACT+AGG + Chr4:28191167-28191186 None:intergenic 60.0%
GATGGATGGCTGCCCATCTC+AGG + Chr4:28197246-28197265 None:intergenic 60.0%
GCAGACGATGGAGGTTTCCC+GGG - Chr4:28191134-28191153 MsG0480019833.01.T01:CDS 60.0%
GGCAGACGATGGAGGTTTCC+CGG - Chr4:28191133-28191152 MsG0480019833.01.T01:CDS 60.0%
GGGTGCCAACCTAGTTGGGT+CGG - Chr4:28191155-28191174 MsG0480019833.01.T01:CDS 60.0%
TCGAGTTCAGCTGTGGGTGG+AGG + Chr4:28197301-28197320 None:intergenic 60.0%
TGGTCCTCGCAGCCCAAAAC+CGG + Chr4:28192437-28192456 None:intergenic 60.0%
TTGAGGTTGGCGGCAGACGA+TGG - Chr4:28191122-28191141 MsG0480019833.01.T01:CDS 60.0%
! ACCCAACTAGGTTGGCACCC+CGG + Chr4:28191155-28191174 None:intergenic 60.0%
!!! ATTCCCGGTTTTGGGCTGCG+AGG - Chr4:28192430-28192449 MsG0480019833.01.T01:intron 60.0%
AGGTTGGCGGCAGACGATGG+AGG - Chr4:28191125-28191144 MsG0480019833.01.T01:CDS 65.0%
GGCTCGAGTTCAGCTGTGGG+TGG + Chr4:28197304-28197323 None:intergenic 65.0%
GGGACACTCAGTCCAGGGAG+CGG - Chr4:28190910-28190929 MsG0480019833.01.T01:three_prime_UTR 65.0%
GGTCCTCGCAGCCCAAAACC+GGG + Chr4:28192436-28192455 None:intergenic 65.0%
GTAGCCCAGCTCAGCGGTCA+AGG + Chr4:28195158-28195177 None:intergenic 65.0%
TGACCGCTGAGCTGGGCTAC+TGG - Chr4:28195158-28195177 MsG0480019833.01.T01:CDS 65.0%
! CCCAACTAGGTTGGCACCCC+GGG + Chr4:28191154-28191173 None:intergenic 65.0%
! CCCGGGGTGCCAACCTAGTT+GGG - Chr4:28191151-28191170 MsG0480019833.01.T01:CDS 65.0%
! TCCCGGGGTGCCAACCTAGT+TGG - Chr4:28191150-28191169 MsG0480019833.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr4 gene 28190806 28198800 28190806 ID=MsG0480019833.01;Name=MsG0480019833.01
Chr4 mRNA 28190806 28198800 28190806 ID=MsG0480019833.01.T01;Parent=MsG0480019833.01;Name=MsG0480019833.01.T01;_AED=0.49;_eAED=0.50;_QI=0|0.3|0.27|0.81|0.8|0.81|11|207|520
Chr4 exon 28190806 28191234 28190806 ID=MsG0480019833.01.T01:exon:9328;Parent=MsG0480019833.01.T01
Chr4 exon 28191370 28191495 28191370 ID=MsG0480019833.01.T01:exon:9327;Parent=MsG0480019833.01.T01
Chr4 exon 28191901 28191996 28191901 ID=MsG0480019833.01.T01:exon:9326;Parent=MsG0480019833.01.T01
Chr4 exon 28192094 28192147 28192094 ID=MsG0480019833.01.T01:exon:9325;Parent=MsG0480019833.01.T01
Chr4 exon 28192863 28192925 28192863 ID=MsG0480019833.01.T01:exon:9324;Parent=MsG0480019833.01.T01
Chr4 exon 28195043 28195243 28195043 ID=MsG0480019833.01.T01:exon:9323;Parent=MsG0480019833.01.T01
Chr4 exon 28195353 28195510 28195353 ID=MsG0480019833.01.T01:exon:9322;Parent=MsG0480019833.01.T01
Chr4 exon 28195670 28195845 28195670 ID=MsG0480019833.01.T01:exon:9321;Parent=MsG0480019833.01.T01
Chr4 exon 28195934 28196021 28195934 ID=MsG0480019833.01.T01:exon:9320;Parent=MsG0480019833.01.T01
Chr4 exon 28196239 28196436 28196239 ID=MsG0480019833.01.T01:exon:9319;Parent=MsG0480019833.01.T01
Chr4 exon 28198620 28198800 28198620 ID=MsG0480019833.01.T01:exon:9318;Parent=MsG0480019833.01.T01
Chr4 CDS 28198620 28198800 28198620 ID=MsG0480019833.01.T01:cds;Parent=MsG0480019833.01.T01
Chr4 CDS 28196239 28196436 28196239 ID=MsG0480019833.01.T01:cds;Parent=MsG0480019833.01.T01
Chr4 CDS 28195934 28196021 28195934 ID=MsG0480019833.01.T01:cds;Parent=MsG0480019833.01.T01
Chr4 CDS 28195670 28195845 28195670 ID=MsG0480019833.01.T01:cds;Parent=MsG0480019833.01.T01
Chr4 CDS 28195353 28195510 28195353 ID=MsG0480019833.01.T01:cds;Parent=MsG0480019833.01.T01
Chr4 CDS 28195043 28195243 28195043 ID=MsG0480019833.01.T01:cds;Parent=MsG0480019833.01.T01
Chr4 CDS 28192863 28192925 28192863 ID=MsG0480019833.01.T01:cds;Parent=MsG0480019833.01.T01
Chr4 CDS 28192094 28192147 28192094 ID=MsG0480019833.01.T01:cds;Parent=MsG0480019833.01.T01
Chr4 CDS 28191901 28191996 28191901 ID=MsG0480019833.01.T01:cds;Parent=MsG0480019833.01.T01
Chr4 CDS 28191370 28191495 28191370 ID=MsG0480019833.01.T01:cds;Parent=MsG0480019833.01.T01
Chr4 CDS 28191013 28191234 28191013 ID=MsG0480019833.01.T01:cds;Parent=MsG0480019833.01.T01
Chr4 three_prime_UTR 28190806 28191012 28190806 ID=MsG0480019833.01.T01:three_prime_utr;Parent=MsG0480019833.01.T01
Gene Sequence

>MsG0480019833.01.T01

ATGCTTCGTAATCGTTGGCACCATGCTTGTCAACTTGGTGTTCAGGTGATCTCTTCCCATATTTACCGTGAGGGTAATGTTTGCGCAGATAGATTGGCGAATATGGGACACTCAGTCCAGGGAGCGGTTTGGCTTTCCTCTCTTCCTCCTCTTTTAGGCTCTGATTTCTTTAGAGACAGATGTTTTGTGTTTCAACCGAAAGATTATTATGATACGACCCAAGATGTGGTTGCAAATGATGGTAATTACGGAGAACTTCGATGGTTACTGCTGGAAACAAAGGATCAACTTGATGATTTTCAACTTCCTCCTCATGTTTCCGAAGCATTGGGACAAAAATATGTTCCTTTTGGTTATGGCTTGTTTAATTTCAAGACACCATCCCGTGCATGCAGTAATCTTGTGATTGACATACCTGCATATTCTTTCTTACACCTAAAAAGTAGCATGTTCGAACTATTTTGTGTAGCTATTGCAGCTGAAGTTTGTGAAGAGCTTTTTACTCCATCTCCCCCTCATGCTGAGCTTGCATTAAATGGGGTTGTGTTTATGAATGCAAGCGGAAGTCACCACCAACTTAGAAAGCTTGATATTCGTCTTCGTGCTTTTATAGGTGCCACTCATACTCTTGAGGCGTTTATATCTTTTTTTACTTTTTATCTAAAAAAATTATTGTCTTTCATTTTATTTGTAACAGATGGATGTGCCAGTGTTGTGGTAAATGGTGATGTTGTTGCTCAGGGTTCCCAATTTTCTTTAAATGATGTTGAGGTTGTGGTTGCTCAGATAGATCTAGATGTGGTTGCAAGCCTTAGAGGATCTATAAGCAGCTTCCAAGAGCAGCCAGTTTGTAAAGCCAATGTTCCTTTAGTATATGTACCATACTGTCTCTGTCTCCCTTTTGACCTTAAATCACGCCTTTCTGTTCCACTTAAGGTTAGTTTATCGTCATCTTTAGATGCAATTTCAGATAGCAAAAAATTATCAACTTTGAAGATGCATGTAGATGGTGGATCTAATGTTGAGAATTTAAGCTTGCAAAACATTCAAGCTCGAACCAGAATGACACTTTCTGGTCTGTGTTATGCCAGTGATGGTTTGGGTGAAATGTTGGAACTATGTGATGAAGTTGATATTGGAATGACTTACGAGGAACTATCAGTTTATGGAAGATTACGGAAAACTTTTCGTTGTGGTCCAGTTTCCATGTTCCAGAATCTGTGTTACAGATGGAGTGTAAGGTTGACTCCATCACAAGTGCCGAAAAGTAAACACTTCTTCAAGTATTATTCTATCAATCGACACAAAATGACCACCTTGACACCTTCCTATCATGCTGAGAGTTATTCGCCAGAGGATAATAATAGGTTTGATCTTCGCCAGTTTCTCTACAATACAAGATGGCCATATCAATTTCGGAAAATCGATGAACTCGTACATGAGCTGGATGTCAAAGATGTTCAAAAATCAGCAAACCATGTGACAGTGGCAGTTGCATCAGATGGTGTTGGTGGGATGGGAGTTGCTGCAGCAAGTTCAGGCAATTCAAATGTTGGAATCTAG
Protein sequence

>MsG0480019833.01.T01

MLRNRWHHACQLGVQVISSHIYREGNVCADRLANMGHSVQGAVWLSSLPPLLGSDFFRDRCFVFQPKDYYDTTQDVVANDGNYGELRWLLLETKDQLDDFQLPPHVSEALGQKYVPFGYGLFNFKTPSRACSNLVIDIPAYSFLHLKSSMFELFCVAIAAEVCEELFTPSPPHAELALNGVVFMNASGSHHQLRKLDIRLRAFIGATHTLEAFISFFTFYLKKLLSFILFVTDGCASVVVNGDVVAQGSQFSLNDVEVVVAQIDLDVVASLRGSISSFQEQPVCKANVPLVYVPYCLCLPFDLKSRLSVPLKVSLSSSLDAISDSKKLSTLKMHVDGGSNVENLSLQNIQARTRMTLSGLCYASDGLGEMLELCDEVDIGMTYEELSVYGRLRKTFRCGPVSMFQNLCYRWSVRLTPSQVPKSKHFFKYYSINRHKMTTLTPSYHAESYSPEDNNRFDLRQFLYNTRWPYQFRKIDELVHELDVKDVQKSANHVTVAVASDGVGGMGVAAASSGNSNVGI*