AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180001116.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180001116.01.T01 MTR_1g031140 92.689 424 29 2 47 470 563 984 0.0 790
MsG0180001116.01.T01 MTR_3g079900 94.344 389 21 1 72 460 1 388 0.0 747
MsG0180001116.01.T01 MTR_7g084560 31.933 357 195 7 67 415 321 637 7.52e-49 179
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180001116.01.T01 AT2G01440 69.403 402 122 1 69 470 573 973 0.0 580
MsG0180001116.01.T01 AT3G02060 31.714 391 218 8 67 449 320 669 1.41e-50 184
MsG0180001116.01.T01 AT3G02060 31.714 391 218 8 67 449 320 669 1.41e-50 184
MsG0180001116.01.T01 AT3G02060 31.714 391 218 8 67 449 319 668 1.50e-50 184

Find 154 sgRNAs with CRISPR-Local

Find 487 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGCCCCTGAGTTGGTGTAAT+TGG 0.159367 1:+16211405 None:intergenic
TGCTCTGAAAGTTCGATAAT+TGG 0.181246 1:+16211665 None:intergenic
ACCCTTGCGCTTGCTTTATA+TGG 0.228107 1:-16214211 MsG0180001116.01.T01:CDS
GCCACTCAAGTAATTGAAAT+TGG 0.233843 1:-16211488 MsG0180001116.01.T01:CDS
TGGGTTTCATCTTGCTAATA+TGG 0.287027 1:-16211288 MsG0180001116.01.T01:CDS
GCAATTTCCTGCACTTAAAC+TGG 0.298836 1:-16210427 MsG0180001116.01.T01:CDS
TGGAGGGAACCGGCAAGGTT+TGG 0.303463 1:-16216433 MsG0180001116.01.T01:CDS
CTCAAAGACTGATGATTATA+TGG 0.304409 1:-16214275 MsG0180001116.01.T01:CDS
TGCAGACAGCGTTGAATTCT+CGG 0.309005 1:-16215680 MsG0180001116.01.T01:CDS
TCGACTTCCAATCTGGTAAT+AGG 0.310055 1:+16211200 None:intergenic
AAGAAACGTTAGGGAAGTTT+AGG 0.311725 1:-16211535 MsG0180001116.01.T01:CDS
GTTATCTCAGACCGGTTTCC+AGG 0.312908 1:-16211605 MsG0180001116.01.T01:CDS
GGAGGGAACCGGCAAGGTTT+GGG 0.327285 1:-16216432 MsG0180001116.01.T01:CDS
GGCTTCCACCCAAACCTTGC+CGG 0.344027 1:+16216424 None:intergenic
GCTTGCGTTGCTTGAAAACT+TGG 0.369982 1:-16215928 MsG0180001116.01.T01:CDS
TAGTTTGACAGGCTCTTCTT+TGG 0.382831 1:-16210295 MsG0180001116.01.T01:three_prime_UTR
CGATTGAAATTTCTCCGGTC+TGG 0.391448 1:+16215725 None:intergenic
TAACTATTAGGCGGCTTTCA+TGG 0.392532 1:-16215991 MsG0180001116.01.T01:intron
AAAGCAAGCGCAAGGGTCCT+TGG 0.393595 1:+16214217 None:intergenic
CGAGTTTCCTATTACCAGAT+TGG 0.393606 1:-16211207 MsG0180001116.01.T01:CDS
GCCCCTGAGTTGGTGTAATT+GGG 0.399144 1:+16211406 None:intergenic
CAAGCAAGTGTTTATAATGC+TGG 0.403142 1:+16215946 None:intergenic
GGAGAAATTTCAATCGTCAT+TGG 0.404798 1:-16215718 MsG0180001116.01.T01:CDS
AGTTGCTACCTGTTCGGTAC+TGG 0.409278 1:-16216971 MsG0180001116.01.T01:CDS
CATATAATCATCAGTCTTTG+AGG 0.409324 1:+16214276 None:intergenic
GTTTGAACAGGAATCCTTCC+TGG 0.409760 1:+16212530 None:intergenic
TAAATCTTCAATTTCGAGTC+CGG 0.410890 1:-16214320 MsG0180001116.01.T01:CDS
ATATAAAATTGTCACCTTGT+AGG 0.418463 1:+16212469 None:intergenic
CCTTCATCGTTTGAAAGTAC+TGG 0.419728 1:-16211324 MsG0180001116.01.T01:CDS
GTAGTCATGAATTAGCCTTT+AGG 0.421104 1:-16210268 MsG0180001116.01.T01:three_prime_UTR
CGCGGTGTTGTGGAGGGAAC+CGG 0.427115 1:-16216443 MsG0180001116.01.T01:CDS
CAGGAAATTGCTCCAGATCA+TGG 0.427300 1:+16210439 None:intergenic
CACCAGGTCCACGTAATAAT+AGG 0.429367 1:+16211264 None:intergenic
CTTAAGTGCTTCCCATGATC+TGG 0.430962 1:-16210451 MsG0180001116.01.T01:CDS
TGTAATGTAAATAGTTTGAC+AGG 0.439782 1:-16210306 MsG0180001116.01.T01:three_prime_UTR
TGATGGATGAGTTGGAAGAT+GGG 0.443050 1:-16211709 MsG0180001116.01.T01:CDS
TGGAGGTCGCGGTGTTGTGG+AGG 0.443291 1:-16216450 MsG0180001116.01.T01:CDS
CGGTGGAGGTCGCGGTGTTG+TGG 0.443791 1:-16216453 MsG0180001116.01.T01:CDS
ACAACCATCATCGATGCATC+TGG 0.444936 1:+16211455 None:intergenic
GCTCTGAAAGTTCGATAATT+GGG 0.448698 1:+16211666 None:intergenic
AGACAGCCGCTTTGCCTGCT+AGG 0.450136 1:-16210393 MsG0180001116.01.T01:CDS
TACAATTGTGGTTTATTACA+TGG 0.458064 1:-16211581 MsG0180001116.01.T01:CDS
CACAATTGTATCCTGGAAAC+CGG 0.460527 1:+16211594 None:intergenic
TTGCTTGGCAAGAAACAATC+TGG 0.461165 1:-16211239 MsG0180001116.01.T01:CDS
ATGATGGATGAGTTGGAAGA+TGG 0.462197 1:-16211710 MsG0180001116.01.T01:CDS
GTCCAACTCGGCCCCTGAGT+TGG 0.463318 1:+16211396 None:intergenic
AAGAGGAAGATTTAACAGTA+AGG 0.469294 1:-16215608 MsG0180001116.01.T01:CDS
TCGATGGTATATGTTTGAAC+AGG 0.470456 1:+16212518 None:intergenic
TCATGAATCCAGTACCGAAC+AGG 0.471911 1:+16216963 None:intergenic
ACCGTCAACGGTGGAGGTCG+CGG 0.474425 1:-16216461 MsG0180001116.01.T01:CDS
ATTGCCGTCGACTTCCAATC+TGG 0.478317 1:+16211193 None:intergenic
CCAGGGAGAGGATGAAGGGG+GGG 0.478961 1:-16216938 MsG0180001116.01.T01:intron
AGGCCAGGGAGAGGATGAAG+GGG 0.479819 1:-16216941 MsG0180001116.01.T01:CDS
CCAACTGTTGCTTTACTCAC+TGG 0.482345 1:-16215888 MsG0180001116.01.T01:CDS
AAGCAAGCGCAAGGGTCCTT+GGG 0.483118 1:+16214218 None:intergenic
CGTGGACCTGGTGACTTGCT+TGG 0.483435 1:-16211254 MsG0180001116.01.T01:CDS
AGCGCAAGGGTCCTTGGGAT+GGG 0.485659 1:+16214223 None:intergenic
CAATCTGGTAATAGGAAACT+CGG 0.485660 1:+16211208 None:intergenic
AAGCGCAAGGGTCCTTGGGA+TGG 0.488030 1:+16214222 None:intergenic
ACCGCGACCTCCACCGTTGA+CGG 0.489215 1:+16216460 None:intergenic
ACCAATTTCAATTACTTGAG+TGG 0.489380 1:+16211487 None:intergenic
TCCTTTGTCACTTCCCTCGA+TGG 0.489814 1:+16212502 None:intergenic
AAGGTTTGGGTGGAAGCCAC+CGG 0.490174 1:-16216419 MsG0180001116.01.T01:CDS
CGCTGTCTGCAAACAAACTG+TGG 0.492730 1:+16215692 None:intergenic
GGGAAGTGACAAAGGATTTG+AGG 0.495742 1:-16212495 MsG0180001116.01.T01:CDS
GGTACTGGATTCATGAGGCC+AGG 0.496798 1:-16216956 MsG0180001116.01.T01:CDS
TTTCATGGTTCCAACTGAGT+TGG 0.497308 1:-16215976 MsG0180001116.01.T01:CDS
GTGATGAATTCTGAGAGGTT+TGG 0.497651 1:-16211434 MsG0180001116.01.T01:CDS
TGAGGCCAGGGAGAGGATGA+AGG 0.500081 1:-16216943 MsG0180001116.01.T01:CDS
AGACGCACATGTTGCTGCAC+TGG 0.511644 1:-16211162 MsG0180001116.01.T01:intron
AATGACGATTGAAATTTCTC+CGG 0.513924 1:+16215720 None:intergenic
CCAGATGATGATGGATGAGT+TGG 0.516635 1:-16211717 MsG0180001116.01.T01:intron
GAGTAAAGTTGCTACCTGTT+CGG 0.517541 1:-16216977 MsG0180001116.01.T01:CDS
CACCAACTCAGGGGCCGAGT+TGG 0.517789 1:-16211398 MsG0180001116.01.T01:CDS
GCCAGGGAGAGGATGAAGGG+GGG 0.518824 1:-16216939 MsG0180001116.01.T01:CDS
CCTGCACTTAAACTGGAGCT+TGG 0.519333 1:-16210420 MsG0180001116.01.T01:CDS
GGCCAGGGAGAGGATGAAGG+GGG 0.519596 1:-16216940 MsG0180001116.01.T01:CDS
GGAGGTCGCGGTGTTGTGGA+GGG 0.521413 1:-16216449 MsG0180001116.01.T01:CDS
AATAAACCACAATTGTATCC+TGG 0.525067 1:+16211587 None:intergenic
GCCTTGTTCCGCGTCCAACT+CGG 0.525727 1:+16211384 None:intergenic
GAGGCCAGGGAGAGGATGAA+GGG 0.526662 1:-16216942 MsG0180001116.01.T01:CDS
TGGCCCAATTACACCAACTC+AGG 0.527566 1:-16211409 MsG0180001116.01.T01:CDS
CGCTTTGGTGTGATTCAAAG+AGG 0.530319 1:-16215625 MsG0180001116.01.T01:CDS
GCAGCTACCGTCAACGGTGG+AGG 0.532082 1:-16216467 MsG0180001116.01.T01:CDS
ACTTATAAACATCAGCCTAA+AGG 0.533109 1:+16210253 None:intergenic
ATCAGAAGACGACATTGATC+CGG 0.533351 1:+16216400 None:intergenic
TTCTTGCCAAGCAAGTCACC+AGG 0.535464 1:+16211248 None:intergenic
GCTTGCCATGGCATGAGAGA+TGG 0.536835 1:-16216999 None:intergenic
ACAATTGTGGTTTATTACAT+GGG 0.540012 1:-16211580 MsG0180001116.01.T01:CDS
CAGATAACCGACTTACCACC+AGG 0.541332 1:-16212548 MsG0180001116.01.T01:CDS
AGGAAATTGCTCCAGATCAT+GGG 0.542959 1:+16210440 None:intergenic
AGGATTTGAGGATGCCTACA+AGG 0.545223 1:-16212483 MsG0180001116.01.T01:intron
CTCGGCCTTACGTATTGCTG+TGG 0.546224 1:-16215662 MsG0180001116.01.T01:CDS
GACTTGATCAATCACCTAGC+AGG 0.546791 1:+16210379 None:intergenic
GTGGATGAGCAGCATCGCTT+TGG 0.547311 1:-16215640 MsG0180001116.01.T01:CDS
ATCTCAAAGTTATCTCAGAC+CGG 0.549467 1:-16211613 MsG0180001116.01.T01:CDS
CGGTTTCCAGGATACAATTG+TGG 0.550814 1:-16211593 MsG0180001116.01.T01:CDS
CACCATATAAAGCAAGCGCA+AGG 0.551892 1:+16214209 None:intergenic
CTCAGGGGCCGAGTTGGACG+CGG 0.553537 1:-16211392 MsG0180001116.01.T01:CDS
CCAAGCTCCAGTTTAAGTGC+AGG 0.555098 1:+16210420 None:intergenic
ATGTTGCAGGGTATCCAGAC+CGG 0.555872 1:-16215739 MsG0180001116.01.T01:intron
TGTTCCAGATGCATCGATGA+TGG 0.557877 1:-16211459 MsG0180001116.01.T01:CDS
GGCCTTACGTATTGCTGTGG+TGG 0.559193 1:-16215659 MsG0180001116.01.T01:CDS
ACGTTAGGGAAGTTTAGGAC+TGG 0.563325 1:-16211530 MsG0180001116.01.T01:CDS
CCAGTACTTTCAAACGATGA+AGG 0.564004 1:+16211324 None:intergenic
GCCGAGTTGGACGCGGAACA+AGG 0.565761 1:-16211385 MsG0180001116.01.T01:CDS
TGTTGTGGAGGGAACCGGCA+AGG 0.569395 1:-16216438 MsG0180001116.01.T01:CDS
GGATTCATGAGGCCAGGGAG+AGG 0.570854 1:-16216950 MsG0180001116.01.T01:CDS
GATGGATGAGTTGGAAGATG+GGG 0.572787 1:-16211708 MsG0180001116.01.T01:CDS
TTGTCTGTAATAGCATCCTC+CGG 0.575138 1:+16214301 None:intergenic
CAAAATTATCACAATGAACA+AGG 0.579586 1:+16210327 None:intergenic
TACTGGAGCAATCATCAGAT+GGG 0.589389 1:-16211307 MsG0180001116.01.T01:CDS
GTTCAAGATTCGATCGAACA+AGG 0.597403 1:-16210174 MsG0180001116.01.T01:intron
GCAGACATGGCAAGAACATG+TGG 0.598690 1:+16214250 None:intergenic
GGCCCAATTACACCAACTCA+GGG 0.604595 1:-16211408 MsG0180001116.01.T01:CDS
GTACTGGAGCAATCATCAGA+TGG 0.606977 1:-16211308 MsG0180001116.01.T01:CDS
ACCATATAAAGCAAGCGCAA+GGG 0.608898 1:+16214210 None:intergenic
ACAAGCGCGGATTATTCGCA+AGG 0.610496 1:-16215850 MsG0180001116.01.T01:intron
GTTCAAACATATACCATCGA+GGG 0.613078 1:-16212515 MsG0180001116.01.T01:CDS
ATCCACCACAGCAATACGTA+AGG 0.613184 1:+16215657 None:intergenic
ACCATCGAGGGAAGTGACAA+AGG 0.613822 1:-16212503 MsG0180001116.01.T01:CDS
CCAGTGAGTAAAGCAACAGT+TGG 0.614716 1:+16215888 None:intergenic
TGGATTGCAACCAACTCAGT+TGG 0.614757 1:+16215966 None:intergenic
GGGAACCGGCAAGGTTTGGG+TGG 0.614876 1:-16216429 MsG0180001116.01.T01:CDS
AATCTGGTAATAGGAAACTC+GGG 0.616903 1:+16211209 None:intergenic
AATCCTTCCTGGTGGTAAGT+CGG 0.617389 1:+16212541 None:intergenic
ATCTTCAATTTCGAGTCCGG+AGG 0.617524 1:-16214317 MsG0180001116.01.T01:CDS
ATGGATGAGTTGGAAGATGG+GGG 0.618804 1:-16211707 MsG0180001116.01.T01:CDS
GTACTGGATTCATGAGGCCA+GGG 0.618867 1:-16216955 MsG0180001116.01.T01:CDS
GTTGCTTGAAAACTTGGACG+AGG 0.619505 1:-16215922 MsG0180001116.01.T01:CDS
AGGAAGATTTAACAGTAAGG+TGG 0.620556 1:-16215605 MsG0180001116.01.T01:intron
GCTGTCTGCAAACAAACTGT+GGG 0.622441 1:+16215693 None:intergenic
TGGGATGGGAGTAGCAGACA+TGG 0.625483 1:+16214237 None:intergenic
GATAGCGCAGCTACCGTCAA+CGG 0.629704 1:-16216473 MsG0180001116.01.T01:CDS
TGGTGATATGTCACTGACAC+AGG 0.629735 1:-16214191 MsG0180001116.01.T01:intron
AGCGCAGCTACCGTCAACGG+TGG 0.631327 1:-16216470 MsG0180001116.01.T01:CDS
GACCTATTATTACGTGGACC+TGG 0.631359 1:-16211266 MsG0180001116.01.T01:CDS
GAATTCTGAGAGGTTTGGAA+TGG 0.632033 1:-16211429 MsG0180001116.01.T01:CDS
TTTCAAACGATGAAGGCCAC+TGG 0.635677 1:+16211331 None:intergenic
GCAGAAGCAGCACGAAGCTG+AGG 0.639554 1:+16211638 None:intergenic
ATTACCAGATTGGAAGTCGA+CGG 0.641804 1:-16211197 MsG0180001116.01.T01:CDS
AGAAGACGACATTGATCCGG+TGG 0.645214 1:+16216403 None:intergenic
TTAATATCATCAACTGCCAG+TGG 0.651291 1:-16211347 MsG0180001116.01.T01:CDS
TGTCTGCTACTCCCATCCCA+AGG 0.667833 1:-16214234 MsG0180001116.01.T01:CDS
TAACCGACTTACCACCAGGA+AGG 0.674759 1:-16212544 MsG0180001116.01.T01:CDS
AATATGGACCTATTATTACG+TGG 0.675630 1:-16211272 MsG0180001116.01.T01:CDS
CAATCACCTAGCAGGCAAAG+CGG 0.695432 1:+16210387 None:intergenic
TGAACAGGAATCCTTCCTGG+TGG 0.697461 1:+16212533 None:intergenic
TGTTCGGTACTGGATTCATG+AGG 0.702732 1:-16216961 MsG0180001116.01.T01:CDS
CAACCCCACTAAAACAAGCG+CGG 0.702736 1:-16215863 MsG0180001116.01.T01:CDS
TGATTGATCAAGTCTTGATG+TGG 0.713708 1:-16210370 MsG0180001116.01.T01:exon
TGTTCAAACATATACCATCG+AGG 0.717968 1:-16212516 MsG0180001116.01.T01:CDS
TGGTTGTGATGAATTCTGAG+AGG 0.736566 1:-16211439 MsG0180001116.01.T01:CDS
GCCCAATTACACCAACTCAG+GGG 0.737840 1:-16211407 MsG0180001116.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATTATAAGAATTTCATA+GGG + Chr1:16211223-16211242 None:intergenic 10.0%
!! TAAAATTATAAGAATTTCAT+AGG + Chr1:16211224-16211243 None:intergenic 10.0%
!! TGGTTTAATTATTTATTATA+AGG + Chr1:16214135-16214154 None:intergenic 10.0%
!!! AAGGATTTTTTTATTTTTTT+TGG + Chr1:16215971-16215990 None:intergenic 10.0%
!!! ATTTTAATATAGTTACATTA+TGG - Chr1:16211432-16211451 MsG0180001116.01.T01:CDS 10.0%
!!! TAATTAATGACTTTTTTATT+TGG + Chr1:16214166-16214185 None:intergenic 10.0%
!!! TGGTTTTTATTATTTATTTA+AGG + Chr1:16214201-16214220 None:intergenic 10.0%
!! AAAATCATAAATTATATGTC+AGG + Chr1:16214280-16214299 None:intergenic 15.0%
!! AAATAAAAATAGCCAAAATA+AGG + Chr1:16212429-16212448 None:intergenic 15.0%
!! AAATGCAAACAATATATTTA+GGG + Chr1:16216081-16216100 None:intergenic 15.0%
!! AATATATCAACTAATAAAGT+TGG + Chr1:16216155-16216174 None:intergenic 15.0%
!! AATGAGATATGAAATAAATA+AGG - Chr1:16213584-16213603 MsG0180001116.01.T01:intron 15.0%
!! ATAAAAGCAATAAAAAAACT+GGG + Chr1:16215913-16215932 None:intergenic 15.0%
!! ATAAAATAACTGAGAAAATA+AGG + Chr1:16212655-16212674 None:intergenic 15.0%
!! TATAAAAGCAATAAAAAAAC+TGG + Chr1:16215914-16215933 None:intergenic 15.0%
!! TATAGTTGTATACTAATATT+TGG + Chr1:16213868-16213887 None:intergenic 15.0%
!! TATATTAACAGGTAAAAAAA+AGG + Chr1:16216864-16216883 None:intergenic 15.0%
!!! AAGTCAAATTTTATATTAAC+AGG + Chr1:16216875-16216894 None:intergenic 15.0%
!!! AATTTTGTAAAGAATTTTTG+TGG - Chr1:16214332-16214351 MsG0180001116.01.T01:intron 15.0%
!!! TATTAGTTGATATATTGTTA+GGG - Chr1:16216159-16216178 MsG0180001116.01.T01:intron 15.0%
!!! TTATTAGTTGATATATTGTT+AGG - Chr1:16216158-16216177 MsG0180001116.01.T01:intron 15.0%
!!! TTTTTTATTTGGTAACTATT+TGG + Chr1:16214155-16214174 None:intergenic 15.0%
!! AAAATATATAATTCCCTGAT+TGG + Chr1:16215010-16215029 None:intergenic 20.0%
!! AAATATATAATTCCCTGATT+GGG + Chr1:16215009-16215028 None:intergenic 20.0%
!! AAATTGTAACTAAAGAAGTT+AGG + Chr1:16212464-16212483 None:intergenic 20.0%
!! AAGATATTAAAGGATATTGA+AGG + Chr1:16210847-16210866 None:intergenic 20.0%
!! AATAAATAATAAAAACCAGC+TGG - Chr1:16214203-16214222 MsG0180001116.01.T01:CDS 20.0%
!! AATCAAACCATCTTAAAATT+TGG + Chr1:16213247-16213266 None:intergenic 20.0%
!! AATGCAAACAATATATTTAG+GGG + Chr1:16216080-16216099 None:intergenic 20.0%
!! AGAGTATGATTGTAAAATAA+CGG + Chr1:16215142-16215161 None:intergenic 20.0%
!! ATACTATATTTATAGTGAGT+AGG + Chr1:16214838-16214857 None:intergenic 20.0%
!! ATTTAAGCTGATTATTAACT+GGG + Chr1:16215888-16215907 None:intergenic 20.0%
!! CAAAAAAGTGACAATTAAAA+CGG - Chr1:16213682-16213701 MsG0180001116.01.T01:intron 20.0%
!! CAAATGCAAACAATATATTT+AGG + Chr1:16216082-16216101 None:intergenic 20.0%
!! TAAAAGCAATAAAAAAACTG+GGG + Chr1:16215912-16215931 None:intergenic 20.0%
!! TAAAATAAAAAACGCAATGA+AGG + Chr1:16212592-16212611 None:intergenic 20.0%
!! TAAATAACTAAGGGTAATAT+TGG + Chr1:16213542-16213561 None:intergenic 20.0%
!! TATTTAAGCTGATTATTAAC+TGG + Chr1:16215889-16215908 None:intergenic 20.0%
!! TCATCTCAAGTATATATTAA+TGG + Chr1:16214674-16214693 None:intergenic 20.0%
!! TTAAACTTATTCAAGCAAAA+GGG + Chr1:16212889-16212908 None:intergenic 20.0%
!! TTAGTATACAACTATAAGAA+TGG - Chr1:16213872-16213891 MsG0180001116.01.T01:intron 20.0%
!! TTTAAACTTATTCAAGCAAA+AGG + Chr1:16212890-16212909 None:intergenic 20.0%
!!! AATTTTAAGATGGTTTGATT+TGG - Chr1:16213247-16213266 MsG0180001116.01.T01:intron 20.0%
!!! ACAATTTTACATCAATACAT+GGG + Chr1:16215248-16215267 None:intergenic 20.0%
!!! ATAAGAATGGTCATAATTTT+TGG - Chr1:16213885-16213904 MsG0180001116.01.T01:intron 20.0%
!!! ATGTATTGATGTAAAATTGT+GGG - Chr1:16215248-16215267 MsG0180001116.01.T01:intron 20.0%
!!! ATTTGATAGTTGTATTTGAA+AGG + Chr1:16212385-16212404 None:intergenic 20.0%
!!! TATTGATAGCTCTAATATAA+AGG - Chr1:16214949-16214968 MsG0180001116.01.T01:intron 20.0%
! AAAAATGTGTTTATAAGTGG+TGG + Chr1:16214030-16214049 None:intergenic 25.0%
! AAAATGTGTTTATAAGTGGT+GGG + Chr1:16214029-16214048 None:intergenic 25.0%
! AAGAAAAAGAAGAAACGTTA+GGG - Chr1:16215450-16215469 MsG0180001116.01.T01:intron 25.0%
! AAGCTGAATAATAAAGATCT+AGG + Chr1:16213052-16213071 None:intergenic 25.0%
! AATATATTTAGGGGTTAACT+AGG + Chr1:16216071-16216090 None:intergenic 25.0%
! AATGAGATGGTAAAATATCT+TGG + Chr1:16216391-16216410 None:intergenic 25.0%
! ACAATTGTGGTTTATTACAT+GGG - Chr1:16215414-16215433 MsG0180001116.01.T01:intron 25.0%
! ACAATTTATGATGCTTATAG+AGG - Chr1:16212477-16212496 MsG0180001116.01.T01:intron 25.0%
! ACCATCAAAATGTTTAGAAA+AGG - Chr1:16210255-16210274 MsG0180001116.01.T01:three_prime_UTR 25.0%
! AGACTTAGAATTTGGATTTA+GGG + Chr1:16213027-16213046 None:intergenic 25.0%
! AGATCATTGGAAGATATTAA+AGG + Chr1:16210857-16210876 None:intergenic 25.0%
! AGTATTGTTGTATAGGAATT+CGG - Chr1:16211566-16211585 MsG0180001116.01.T01:CDS 25.0%
! ATAAGATTAGAACATGGATT+TGG - Chr1:16215207-16215226 MsG0180001116.01.T01:intron 25.0%
! ATATAAAATTGTCACCTTGT+AGG + Chr1:16214528-16214547 None:intergenic 25.0%
! ATCACACACCTATTATATTA+GGG + Chr1:16215103-16215122 None:intergenic 25.0%
! CAAAAAGTAAGAACTTAAAC+AGG + Chr1:16216116-16216135 None:intergenic 25.0%
! CAAAATTATCACAATGAACA+AGG + Chr1:16216670-16216689 None:intergenic 25.0%
! CTAAAACATGATAAGAATGA+CGG - Chr1:16216988-16217007 MsG0180001116.01.T01:CDS 25.0%
! CTGAAAAATGTGTTTATAAG+TGG + Chr1:16214033-16214052 None:intergenic 25.0%
! GCTGTTAATTTATATTGTTC+AGG - Chr1:16216282-16216301 MsG0180001116.01.T01:intron 25.0%
! GTATATATTAATGGCATGTA+AGG + Chr1:16214665-16214684 None:intergenic 25.0%
! GTATTTATGTTGTAGTATGT+GGG - Chr1:16211637-16211656 MsG0180001116.01.T01:CDS 25.0%
! TACAATGAATCTAAGCTAAA+TGG + Chr1:16212165-16212184 None:intergenic 25.0%
! TACAATTGTGGTTTATTACA+TGG - Chr1:16215413-16215432 MsG0180001116.01.T01:intron 25.0%
! TAGACTTAGAATTTGGATTT+AGG + Chr1:16213028-16213047 None:intergenic 25.0%
! TAGTTTATGCTATACTTCAA+TGG - Chr1:16216415-16216434 MsG0180001116.01.T01:CDS 25.0%
! TATTTCATTTCCCTTCATAA+AGG - Chr1:16212353-16212372 MsG0180001116.01.T01:intron 25.0%
! TGTAATGTAAATAGTTTGAC+AGG - Chr1:16216688-16216707 MsG0180001116.01.T01:intron 25.0%
! TGTATTTATGTTGTAGTATG+TGG - Chr1:16211636-16211655 MsG0180001116.01.T01:CDS 25.0%
! TTACCCTTAGTTATTTATTG+CGG - Chr1:16213545-16213564 MsG0180001116.01.T01:intron 25.0%
! TTTGAAAGTGACAGTTAAAT+CGG + Chr1:16213491-16213510 None:intergenic 25.0%
! TTTGTAGAGAAAAAATGCTT+TGG - Chr1:16211809-16211828 MsG0180001116.01.T01:intron 25.0%
!! AAAACTGTTTGAAATAAAGG+AGG - Chr1:16213827-16213846 MsG0180001116.01.T01:intron 25.0%
!! AAACTGTTTGAAATAAAGGA+GGG - Chr1:16213828-16213847 MsG0180001116.01.T01:intron 25.0%
!! AAGATATTTTACCATCTCAT+TGG - Chr1:16216390-16216409 MsG0180001116.01.T01:CDS 25.0%
!! CAATTTTACATCAATACATG+GGG + Chr1:16215247-16215266 None:intergenic 25.0%
!! CACAATTTTACATCAATACA+TGG + Chr1:16215249-16215268 None:intergenic 25.0%
!! CACTTATAAACACATTTTTC+AGG - Chr1:16214031-16214050 MsG0180001116.01.T01:intron 25.0%
!! CATGTATTGATGTAAAATTG+TGG - Chr1:16215247-16215266 MsG0180001116.01.T01:intron 25.0%
!! GAGAAAACTGTTTGAAATAA+AGG - Chr1:16213824-16213843 MsG0180001116.01.T01:intron 25.0%
!! TCCTTTTCTAAACATTTTGA+TGG + Chr1:16210259-16210278 None:intergenic 25.0%
!! TCGTCTTACATTTTCTATTA+TGG + Chr1:16210621-16210640 None:intergenic 25.0%
!! TGCTTAATTTTCCAGTTTTT+TGG - Chr1:16214578-16214597 MsG0180001116.01.T01:intron 25.0%
!! TTTTGCATTAGAATGATGAA+CGG + Chr1:16212841-16212860 None:intergenic 25.0%
!!! AAGTTGATAAGATTAGAACA+TGG - Chr1:16215201-16215220 MsG0180001116.01.T01:intron 25.0%
!!! ACTTTATAAGCTGATTTTGT+GGG - Chr1:16212990-16213009 MsG0180001116.01.T01:intron 25.0%
!!! ATGGTCATAATTTTTGGAAA+CGG - Chr1:16213891-16213910 MsG0180001116.01.T01:intron 25.0%
!!! CTGTTTAAGTTCTTACTTTT+TGG - Chr1:16216114-16216133 MsG0180001116.01.T01:intron 25.0%
!!! GTTAGTCTTAGAAATTACAT+GGG - Chr1:16213286-16213305 MsG0180001116.01.T01:intron 25.0%
!!! TAAATTTGTTTTAGCAACTG+CGG - Chr1:16213718-16213737 MsG0180001116.01.T01:intron 25.0%
!!! TGTTAGTCTTAGAAATTACA+TGG - Chr1:16213285-16213304 MsG0180001116.01.T01:intron 25.0%
!!! TTAGTCTTAGAAATTACATG+GGG - Chr1:16213287-16213306 MsG0180001116.01.T01:intron 25.0%
AAAAAATGCTTTGGCTATAC+TGG - Chr1:16211818-16211837 MsG0180001116.01.T01:intron 30.0%
AAAAATCCAATTGAAAAGCC+TGG + Chr1:16210928-16210947 None:intergenic 30.0%
AAAGGATGTATCCTTTATGA+AGG + Chr1:16212367-16212386 None:intergenic 30.0%
AAGAGACACTTAAAAAGGAA+CGG + Chr1:16213450-16213469 None:intergenic 30.0%
AAGAGGAAGATTTAACAGTA+AGG - Chr1:16211386-16211405 MsG0180001116.01.T01:CDS 30.0%
AAGGATGTATCCTTTATGAA+GGG + Chr1:16212366-16212385 None:intergenic 30.0%
AATAAACCACAATTGTATCC+TGG + Chr1:16215410-16215429 None:intergenic 30.0%
AATAGCCAAAATAAGGATAG+AGG + Chr1:16212422-16212441 None:intergenic 30.0%
AATATGGACCTATTATTACG+TGG - Chr1:16215722-16215741 MsG0180001116.01.T01:CDS 30.0%
AATGACGATTGAAATTTCTC+CGG + Chr1:16211277-16211296 None:intergenic 30.0%
AATGATAGTTGAAGTCTTGA+AGG - Chr1:16212243-16212262 MsG0180001116.01.T01:intron 30.0%
ACACCTATTATATTAGGGAT+TGG + Chr1:16215098-16215117 None:intergenic 30.0%
ACCAATTTCAATTACTTGAG+TGG + Chr1:16215510-16215529 None:intergenic 30.0%
ACTTATAAACATCAGCCTAA+AGG + Chr1:16216744-16216763 None:intergenic 30.0%
AGGTTTACAATTGATCATTC+CGG + Chr1:16211850-16211869 None:intergenic 30.0%
ATACCTTGGTAGATATAGTT+AGG - Chr1:16211892-16211911 MsG0180001116.01.T01:intron 30.0%
ATAGCCAAAATAAGGATAGA+GGG + Chr1:16212421-16212440 None:intergenic 30.0%
ATATGTTATATGTACCACCA+GGG - Chr1:16214756-16214775 MsG0180001116.01.T01:intron 30.0%
ATATTAAAGCTCTGTTCAGT+TGG - Chr1:16214912-16214931 MsG0180001116.01.T01:intron 30.0%
ATATTACGAAGCCTCAAAAT+AGG + Chr1:16216786-16216805 None:intergenic 30.0%
ATCATACTCTGTCAATCATT+TGG - Chr1:16215152-16215171 MsG0180001116.01.T01:intron 30.0%
ATGATAGTTGAAGTCTTGAA+GGG - Chr1:16212244-16212263 MsG0180001116.01.T01:intron 30.0%
ATGTATAGGATATCATAACC+AGG - Chr1:16210907-16210926 MsG0180001116.01.T01:intron 30.0%
ATTCAAAACTCTTGAAGATG+CGG + Chr1:16210361-16210380 None:intergenic 30.0%
ATTCAAGATATGATGTTGCA+GGG - Chr1:16211243-16211262 MsG0180001116.01.T01:CDS 30.0%
CAAAATCAGCTTATAAAGTG+AGG + Chr1:16212989-16213008 None:intergenic 30.0%
CACAATCCCAATAAAAATAG+TGG + Chr1:16216027-16216046 None:intergenic 30.0%
CACCTATTATATTAGGGATT+GGG + Chr1:16215097-16215116 None:intergenic 30.0%
CATATAATCATCAGTCTTTG+AGG + Chr1:16212721-16212740 None:intergenic 30.0%
CATCACACACCTATTATATT+AGG + Chr1:16215104-16215123 None:intergenic 30.0%
CTCAAAGACTGATGATTATA+TGG - Chr1:16212719-16212738 MsG0180001116.01.T01:intron 30.0%
GAAGAAAAAGAAGAAACGTT+AGG - Chr1:16215449-16215468 MsG0180001116.01.T01:intron 30.0%
GAAGCTTAGTATTGTTGTAT+AGG - Chr1:16211559-16211578 MsG0180001116.01.T01:CDS 30.0%
GATATATAGTGATGTAACAC+TGG + Chr1:16210810-16210829 None:intergenic 30.0%
GATTATTAACTGGGTAACTA+TGG + Chr1:16215879-16215898 None:intergenic 30.0%
TACTAGATGTAATGACTCAT+GGG - Chr1:16213329-16213348 MsG0180001116.01.T01:intron 30.0%
TAGTAGAGTCAATGCAATTT+AGG - Chr1:16212193-16212212 MsG0180001116.01.T01:intron 30.0%
TATATGTTATATGTACCACC+AGG - Chr1:16214755-16214774 MsG0180001116.01.T01:intron 30.0%
TATCTACCAAGGTATGAATA+AGG + Chr1:16211887-16211906 None:intergenic 30.0%
TATTCAAGATATGATGTTGC+AGG - Chr1:16211242-16211261 MsG0180001116.01.T01:CDS 30.0%
TCAAAGAGAGTTGAATAATC+AGG + Chr1:16211598-16211617 None:intergenic 30.0%
TCCAAAAGAGACACTTAAAA+AGG + Chr1:16213455-16213474 None:intergenic 30.0%
TCTCCGCAATAAATAACTAA+GGG + Chr1:16213551-16213570 None:intergenic 30.0%
TGATATCCTATACATCTGAT+AGG + Chr1:16210902-16210921 None:intergenic 30.0%
TGTATACTAACGATACGATT+AGG - Chr1:16215934-16215953 MsG0180001116.01.T01:CDS 30.0%
TTAACAGCAGCATAAAATGT+TGG + Chr1:16216270-16216289 None:intergenic 30.0%
TTACTAGATGTAATGACTCA+TGG - Chr1:16213328-16213347 MsG0180001116.01.T01:intron 30.0%
TTCAGATTCAGAATTAACAG+AGG - Chr1:16210285-16210304 MsG0180001116.01.T01:three_prime_UTR 30.0%
TTGTAGCTATCTAATCTCAA+AGG + Chr1:16213794-16213813 None:intergenic 30.0%
TTTGCATTAGAATGATGAAC+GGG + Chr1:16212840-16212859 None:intergenic 30.0%
! AATAAGAAACATCCTTTTGC+AGG + Chr1:16212558-16212577 None:intergenic 30.0%
! ATGTTGGATCTGAAACTTTA+CGG - Chr1:16213364-16213383 MsG0180001116.01.T01:intron 30.0%
! ATTTTTATCTGCACTGTCAT+TGG - Chr1:16214555-16214574 MsG0180001116.01.T01:intron 30.0%
! GAGTTTTTCATTACAGTTAC+AGG - Chr1:16210697-16210716 MsG0180001116.01.T01:intron 30.0%
! GATCTTTGTATCCTATTTTG+AGG - Chr1:16216772-16216791 MsG0180001116.01.T01:intron 30.0%
! TAAATCTTCAATTTCGAGTC+CGG - Chr1:16212674-16212693 MsG0180001116.01.T01:intron 30.0%
! TAGTATGGACTAATGTATGT+GGG + Chr1:16213143-16213162 None:intergenic 30.0%
! TCTAGGATAGACTTAGAATT+TGG + Chr1:16213035-16213054 None:intergenic 30.0%
! TGTATCACATCACATGTTTT+TGG - Chr1:16214982-16215001 MsG0180001116.01.T01:intron 30.0%
! TTCTACATCAGTTACTTTGT+TGG - Chr1:16214230-16214249 MsG0180001116.01.T01:CDS 30.0%
! TTTGTGGTTATCGTTTTACA+AGG - Chr1:16214348-16214367 MsG0180001116.01.T01:intron 30.0%
!! ACCTTATAAGCCAGTTTTAT+GGG - Chr1:16213202-16213221 MsG0180001116.01.T01:intron 30.0%
!! CACTTTATAAGCTGATTTTG+TGG - Chr1:16212989-16213008 MsG0180001116.01.T01:intron 30.0%
!! CATCTGTCCAAATTTTAAGA+TGG - Chr1:16213237-16213256 MsG0180001116.01.T01:intron 30.0%
!! CTACATCTTAGAGTTTTGAT+TGG - Chr1:16213959-16213978 MsG0180001116.01.T01:intron 30.0%
!! CTTTATAAGCTGATTTTGTG+GGG - Chr1:16212991-16213010 MsG0180001116.01.T01:intron 30.0%
!! TCTAAACATTTTGATGGTTC+TGG + Chr1:16210253-16210272 None:intergenic 30.0%
!! TTTAAGATGGTTTGATTTGG+TGG - Chr1:16213250-16213269 MsG0180001116.01.T01:intron 30.0%
!! TTTCTTTGAGATTGCAGAAA+AGG - Chr1:16210482-16210501 MsG0180001116.01.T01:intron 30.0%
!! TTTGAGGCTTCGTAATATTT+TGG - Chr1:16216788-16216807 MsG0180001116.01.T01:intron 30.0%
!!! CTCTGACCACTATTTTTATT+GGG - Chr1:16216018-16216037 MsG0180001116.01.T01:intron 30.0%
!!! TCAAGAGTTTTGAATTTCAC+TGG - Chr1:16210366-16210385 MsG0180001116.01.T01:three_prime_UTR 30.0%
!!! TCAGCTATGCATTTAGTTTT+TGG - Chr1:16211508-16211527 MsG0180001116.01.T01:CDS 30.0%
!!! TCCTTTTTAAGTGTCTCTTT+TGG - Chr1:16213451-16213470 MsG0180001116.01.T01:intron 30.0%
!!! TCTCTGACCACTATTTTTAT+TGG - Chr1:16216017-16216036 MsG0180001116.01.T01:intron 30.0%
AAAAGGGACACATAGATAGA+GGG + Chr1:16212873-16212892 None:intergenic 35.0%
AAATTTAGTGGCACAACACT+TGG + Chr1:16211486-16211505 None:intergenic 35.0%
AACTATCTTGTAGTGAATGC+TGG - Chr1:16211925-16211944 MsG0180001116.01.T01:intron 35.0%
AAGAAACGTTAGGGAAGTTT+AGG - Chr1:16215459-16215478 MsG0180001116.01.T01:intron 35.0%
AATCTGGTAATAGGAAACTC+GGG + Chr1:16215788-16215807 None:intergenic 35.0%
AATTCAAATGATCAATCGCC+AGG - Chr1:16212007-16212026 MsG0180001116.01.T01:intron 35.0%
ACGCTCAATTACCAAAAAAC+TGG + Chr1:16214592-16214611 None:intergenic 35.0%
ACTAGATGTAATGACTCATG+GGG - Chr1:16213330-16213349 MsG0180001116.01.T01:intron 35.0%
AGAATATTGAGTCCTGCAAA+AGG - Chr1:16212543-16212562 MsG0180001116.01.T01:CDS 35.0%
AGATTCAGAATTAACAGAGG+TGG - Chr1:16210288-16210307 MsG0180001116.01.T01:three_prime_UTR 35.0%
AGGAAGATTTAACAGTAAGG+TGG - Chr1:16211389-16211408 MsG0180001116.01.T01:CDS 35.0%
AGGAGACTTAAATAACTCCT+TGG - Chr1:16211749-16211768 MsG0180001116.01.T01:intron 35.0%
AGTCTTGGATCTGAAGAAAA+TGG + Chr1:16211727-16211746 None:intergenic 35.0%
ATCTCAAAGTTATCTCAGAC+CGG - Chr1:16215381-16215400 MsG0180001116.01.T01:intron 35.0%
ATTGTAAACCTGTCAACACT+CGG - Chr1:16211859-16211878 MsG0180001116.01.T01:intron 35.0%
ATTTAAGTCTCCTCTAGTCT+TGG + Chr1:16211742-16211761 None:intergenic 35.0%
CAAGCAAGTGTTTATAATGC+TGG + Chr1:16211051-16211070 None:intergenic 35.0%
CAATCTGGTAATAGGAAACT+CGG + Chr1:16215789-16215808 None:intergenic 35.0%
CATAAACTAGTCCAATGAGA+TGG + Chr1:16216404-16216423 None:intergenic 35.0%
CTAACTTCATCCCATAAAAC+TGG + Chr1:16213215-16213234 None:intergenic 35.0%
CTCTCCGCAATAAATAACTA+AGG + Chr1:16213552-16213571 None:intergenic 35.0%
CTCTTTGACGTTCTTCAATT+GGG - Chr1:16211610-16211629 MsG0180001116.01.T01:CDS 35.0%
GAAATGAATATGCAACAAGC+TGG - Chr1:16212266-16212285 MsG0180001116.01.T01:intron 35.0%
GACCCAATCCCTAATATAAT+AGG - Chr1:16215092-16215111 MsG0180001116.01.T01:intron 35.0%
GATACTCGTGTCTAACTATT+AGG - Chr1:16210991-16211010 MsG0180001116.01.T01:intron 35.0%
GCCACTCAAGTAATTGAAAT+TGG - Chr1:16215506-16215525 MsG0180001116.01.T01:intron 35.0%
GGAGAAATTTCAATCGTCAT+TGG - Chr1:16211276-16211295 MsG0180001116.01.T01:CDS 35.0%
GGGTGCAAGAAAAGATTAAT+TGG + Chr1:16211203-16211222 None:intergenic 35.0%
GTTCAAACATATACCATCGA+GGG - Chr1:16214479-16214498 MsG0180001116.01.T01:intron 35.0%
GTTGCTTCTACATGAAATGT+GGG - Chr1:16216342-16216361 MsG0180001116.01.T01:intron 35.0%
TACAATGTCGAGTTTGTCAA+AGG + Chr1:16210165-16210184 None:intergenic 35.0%
TAGACAAAGATAAAGACCTC+TGG - Chr1:16210739-16210758 MsG0180001116.01.T01:intron 35.0%
TATTAGGGATTGGGTCAAAA+TGG + Chr1:16215088-16215107 None:intergenic 35.0%
TCACCTAACTATATCTACCA+AGG + Chr1:16211898-16211917 None:intergenic 35.0%
TCAGTAGATTCCAATCTAGA+TGG - Chr1:16213396-16213415 MsG0180001116.01.T01:intron 35.0%
TCGATGGTATATGTTTGAAC+AGG + Chr1:16214479-16214498 None:intergenic 35.0%
TCTCTTTGACGTTCTTCAAT+TGG - Chr1:16211609-16211628 MsG0180001116.01.T01:CDS 35.0%
TCTGCAACAAGTAGATAGTT+TGG - Chr1:16212071-16212090 MsG0180001116.01.T01:intron 35.0%
TGACAATTAAAACGGAACAG+AGG - Chr1:16213690-16213709 MsG0180001116.01.T01:intron 35.0%
TGATTGATCAAGTCTTGATG+TGG - Chr1:16216624-16216643 MsG0180001116.01.T01:intron 35.0%
TGGGTTTCATCTTGCTAATA+TGG - Chr1:16215706-16215725 MsG0180001116.01.T01:CDS 35.0%
TGGTTCATTTCTCTTTGTCT+AGG - Chr1:16211409-16211428 MsG0180001116.01.T01:CDS 35.0%
TGTTCAAACATATACCATCG+AGG - Chr1:16214478-16214497 MsG0180001116.01.T01:intron 35.0%
TTAATATCATCAACTGCCAG+TGG - Chr1:16215647-16215666 MsG0180001116.01.T01:CDS 35.0%
TTCATTACAGTTACAGGTAG+AGG - Chr1:16210703-16210722 MsG0180001116.01.T01:intron 35.0%
TTCCCATGTATCAAAGTCAT+CGG - Chr1:16210320-16210339 MsG0180001116.01.T01:three_prime_UTR 35.0%
TTCCGATGACTTTGATACAT+GGG + Chr1:16210325-16210344 None:intergenic 35.0%
TTGTCCAAATTCCAAAGCAT+TGG + Chr1:16216199-16216218 None:intergenic 35.0%
TTGTTGTATAGGAATTCGGT+AGG - Chr1:16211570-16211589 MsG0180001116.01.T01:CDS 35.0%
TTTAAACCTCACCAATGCTT+TGG - Chr1:16216185-16216204 MsG0180001116.01.T01:intron 35.0%
TTTCCGATGACTTTGATACA+TGG + Chr1:16210326-16210345 None:intergenic 35.0%
! AAGTGTTGTGCCACTAAATT+TGG - Chr1:16211485-16211504 MsG0180001116.01.T01:CDS 35.0%
! ATCGAACAAGGCCATATTTT+TGG - Chr1:16216832-16216851 MsG0180001116.01.T01:intron 35.0%
! CACCTTATAAGCCAGTTTTA+TGG - Chr1:16213201-16213220 MsG0180001116.01.T01:intron 35.0%
! GTAGTATGGACTAATGTATG+TGG + Chr1:16213144-16213163 None:intergenic 35.0%
! TAAAACTGGCTTATAAGGTG+AGG + Chr1:16213201-16213220 None:intergenic 35.0%
! TCATAACCAGGCTTTTCAAT+TGG - Chr1:16210919-16210938 MsG0180001116.01.T01:intron 35.0%
! TCCCATAAAACTGGCTTATA+AGG + Chr1:16213206-16213225 None:intergenic 35.0%
! TGTTGCTTCTACATGAAATG+TGG - Chr1:16216341-16216360 MsG0180001116.01.T01:intron 35.0%
!! AAACTCTAAGATGTAGAGTC+TGG + Chr1:16213955-16213974 None:intergenic 35.0%
!! AAAGGTGCCATCCAAAAATA+TGG + Chr1:16216846-16216865 None:intergenic 35.0%
!! ATAATTTTTGGAAACGGCAG+CGG - Chr1:16213897-16213916 MsG0180001116.01.T01:intron 35.0%
!! CAGTTTTATGGGATGAAGTT+AGG - Chr1:16213213-16213232 MsG0180001116.01.T01:intron 35.0%
!! GCTCTGAAAGTTCGATAATT+GGG + Chr1:16215331-16215350 None:intergenic 35.0%
!! GTAGTCATGAATTAGCCTTT+AGG - Chr1:16216726-16216745 MsG0180001116.01.T01:intron 35.0%
!! TGCTCTGAAAGTTCGATAAT+TGG + Chr1:16215332-16215351 None:intergenic 35.0%
!!! AACAAGGCCATATTTTTGGA+TGG - Chr1:16216836-16216855 MsG0180001116.01.T01:intron 35.0%
!!! CTGGATAGTTTTGATTTCTG+TGG - Chr1:16212285-16212304 MsG0180001116.01.T01:intron 35.0%
AATCAGTCCTCAAACTGCTT+TGG + Chr1:16212041-16212060 None:intergenic 40.0%
AATTGATAAGAGCCCCACAT+TGG + Chr1:16214068-16214087 None:intergenic 40.0%
ACCATATAAAGCAAGCGCAA+GGG + Chr1:16212787-16212806 None:intergenic 40.0%
ACTCGTGTCTAACTATTAGG+CGG - Chr1:16210994-16211013 MsG0180001116.01.T01:intron 40.0%
AGGAAATTGCTCCAGATCAT+GGG + Chr1:16216557-16216576 None:intergenic 40.0%
AGGCCATATTTCATCCAATG+TGG - Chr1:16214051-16214070 MsG0180001116.01.T01:intron 40.0%
ATCAACTTAGAGCACATCTG+CGG + Chr1:16215189-16215208 None:intergenic 40.0%
ATCAGAAGACGACATTGATC+CGG + Chr1:16210597-16210616 None:intergenic 40.0%
ATGTATGTGGGTGGAATAAC+AGG + Chr1:16213131-16213150 None:intergenic 40.0%
ATTACCAGATTGGAAGTCGA+CGG - Chr1:16215797-16215816 MsG0180001116.01.T01:intron 40.0%
ATTGCGCCTATCAGATGTAT+AGG - Chr1:16210893-16210912 MsG0180001116.01.T01:intron 40.0%
ATTTCTGTGGTCCAGCATAA+TGG - Chr1:16212298-16212317 MsG0180001116.01.T01:intron 40.0%
CAAAAGGGACACATAGATAG+AGG + Chr1:16212874-16212893 None:intergenic 40.0%
CACAATTGTATCCTGGAAAC+CGG + Chr1:16215403-16215422 None:intergenic 40.0%
CACTTGGATGTTGTGGTATT+TGG + Chr1:16211470-16211489 None:intergenic 40.0%
CCAGTACTTTCAAACGATGA+AGG + Chr1:16215673-16215692 None:intergenic 40.0%
CGAGTCTATAGAGAGATCAT+TGG + Chr1:16210870-16210889 None:intergenic 40.0%
CGAGTTTCCTATTACCAGAT+TGG - Chr1:16215787-16215806 MsG0180001116.01.T01:intron 40.0%
CTAGATGTAATGACTCATGG+GGG - Chr1:16213331-16213350 MsG0180001116.01.T01:intron 40.0%
GAAACCATCACCATCTAGAT+TGG + Chr1:16213409-16213428 None:intergenic 40.0%
GAGTAAAGTTGCTACCTGTT+CGG - Chr1:16210017-16210036 MsG0180001116.01.T01:three_prime_UTR 40.0%
GATGTCGTTATTACCCACAA+CGG - Chr1:16211662-16211681 MsG0180001116.01.T01:CDS 40.0%
GATTCCAATCTAGATGGTGA+TGG - Chr1:16213402-16213421 MsG0180001116.01.T01:intron 40.0%
GCAATTTCCTGCACTTAAAC+TGG - Chr1:16216567-16216586 MsG0180001116.01.T01:intron 40.0%
GCATAGCTGACCAAATTTAG+TGG + Chr1:16211498-16211517 None:intergenic 40.0%
GCCATATTTCATCCAATGTG+GGG - Chr1:16214053-16214072 MsG0180001116.01.T01:intron 40.0%
GGCCATATTTCATCCAATGT+GGG - Chr1:16214052-16214071 MsG0180001116.01.T01:intron 40.0%
GTCGAGTTTGTCAAAGGTTT+GGG + Chr1:16210159-16210178 None:intergenic 40.0%
GTTCAAGATTCGATCGAACA+AGG - Chr1:16216820-16216839 MsG0180001116.01.T01:intron 40.0%
GTTCAGGAACATCAGTAGTA+TGG + Chr1:16213158-16213177 None:intergenic 40.0%
TAAATAACTCCTTGGTCTCG+AGG - Chr1:16211757-16211776 MsG0180001116.01.T01:intron 40.0%
TAACTATTAGGCGGCTTTCA+TGG - Chr1:16211003-16211022 MsG0180001116.01.T01:intron 40.0%
TACTGAACATGTGCTTCCAT+AGG - Chr1:16210079-16210098 MsG0180001116.01.T01:three_prime_UTR 40.0%
TACTGATGTTCCTGAACAAG+AGG - Chr1:16213161-16213180 MsG0180001116.01.T01:intron 40.0%
TACTGGAGCAATCATCAGAT+GGG - Chr1:16215687-16215706 MsG0180001116.01.T01:CDS 40.0%
TAGTGAGTAGGAGTTGAACT+TGG + Chr1:16214826-16214845 None:intergenic 40.0%
TAGTTTGACAGGCTCTTCTT+TGG - Chr1:16216699-16216718 MsG0180001116.01.T01:intron 40.0%
TATACATCTGATAGGCGCAA+TGG + Chr1:16210894-16210913 None:intergenic 40.0%
TCGACTTCCAATCTGGTAAT+AGG + Chr1:16215797-16215816 None:intergenic 40.0%
TGGTTGTGATGAATTCTGAG+AGG - Chr1:16215555-16215574 MsG0180001116.01.T01:intron 40.0%
TGTATGTGGGTGGAATAACA+GGG + Chr1:16213130-16213149 None:intergenic 40.0%
TGTCGAGTTTGTCAAAGGTT+TGG + Chr1:16210160-16210179 None:intergenic 40.0%
TTCTTCAGATCCAAGACTAG+AGG - Chr1:16211729-16211748 MsG0180001116.01.T01:intron 40.0%
TTGAATTTCACTGGAGTCGA+GGG - Chr1:16210375-16210394 MsG0180001116.01.T01:exon 40.0%
TTGCTTGGCAAGAAACAATC+TGG - Chr1:16215755-16215774 MsG0180001116.01.T01:intron 40.0%
TTGTCTGTAATAGCATCCTC+CGG + Chr1:16212696-16212715 None:intergenic 40.0%
TTTCATGGTTCCAACTGAGT+TGG - Chr1:16211018-16211037 MsG0180001116.01.T01:intron 40.0%
TTTCTGTGGTCCAGCATAAT+GGG - Chr1:16212299-16212318 MsG0180001116.01.T01:intron 40.0%
TTTGAATTTCACTGGAGTCG+AGG - Chr1:16210374-16210393 MsG0180001116.01.T01:exon 40.0%
! CCTTCATCGTTTGAAAGTAC+TGG - Chr1:16215670-16215689 MsG0180001116.01.T01:CDS 40.0%
! CTGCTGCGCATAAGATTTTA+AGG + Chr1:16215990-16216009 None:intergenic 40.0%
! GAATTCTGAGAGGTTTGGAA+TGG - Chr1:16215565-16215584 MsG0180001116.01.T01:intron 40.0%
! GTGATGAATTCTGAGAGGTT+TGG - Chr1:16215560-16215579 MsG0180001116.01.T01:intron 40.0%
! TATGGACTAATGTATGTGGG+TGG + Chr1:16213140-16213159 None:intergenic 40.0%
! TGATGGATGAGTTGGAAGAT+GGG - Chr1:16215285-16215304 MsG0180001116.01.T01:intron 40.0%
! TGATTTTGTGGGGTTGAGTT+AGG - Chr1:16213001-16213020 MsG0180001116.01.T01:intron 40.0%
!! AGTGTCTGTGAGTGTTACTT+TGG - Chr1:16214796-16214815 MsG0180001116.01.T01:intron 40.0%
!! ATGATGGATGAGTTGGAAGA+TGG - Chr1:16215284-16215303 MsG0180001116.01.T01:intron 40.0%
!! CAAATTCCAAAGCATTGGTG+AGG + Chr1:16216194-16216213 None:intergenic 40.0%
!! CTCACCAATGCTTTGGAATT+TGG - Chr1:16216192-16216211 MsG0180001116.01.T01:intron 40.0%
!! GACACCCTCTATCCTTATTT+TGG - Chr1:16212414-16212433 MsG0180001116.01.T01:intron 40.0%
!! GGTTTTGTAAGGGTTGAGTT+AGG + Chr1:16213986-16214005 None:intergenic 40.0%
!!! ACATGTTTTTGGACCCAATC+AGG - Chr1:16214993-16215012 MsG0180001116.01.T01:intron 40.0%
!!! ATAATCCGCGCTTGTTTTAG+TGG + Chr1:16211139-16211158 None:intergenic 40.0%
!!! CATGTTTTTGGACCCAATCA+GGG - Chr1:16214994-16215013 MsG0180001116.01.T01:intron 40.0%
!!! TAATCCGCGCTTGTTTTAGT+GGG + Chr1:16211138-16211157 None:intergenic 40.0%
AATCCTTCCTGGTGGTAAGT+CGG + Chr1:16214456-16214475 None:intergenic 45.0%
ACAACCATCATCGATGCATC+TGG + Chr1:16215542-16215561 None:intergenic 45.0%
ACCCTTGCGCTTGCTTTATA+TGG - Chr1:16212783-16212802 MsG0180001116.01.T01:intron 45.0%
AGGATTTGAGGATGCCTACA+AGG - Chr1:16214511-16214530 MsG0180001116.01.T01:intron 45.0%
ATAGTTTGGTCTCTGTGCTG+TGG - Chr1:16212085-16212104 MsG0180001116.01.T01:intron 45.0%
ATATTCCCTGATGACCGTTG+TGG + Chr1:16211679-16211698 None:intergenic 45.0%
ATCCACCACAGCAATACGTA+AGG + Chr1:16211340-16211359 None:intergenic 45.0%
ATTACCCACAACGGTCATCA+GGG - Chr1:16211671-16211690 MsG0180001116.01.T01:CDS 45.0%
CAAAACTCTTGAAGATGCGG+CGG + Chr1:16210358-16210377 None:intergenic 45.0%
CACCAGGTCCACGTAATAAT+AGG + Chr1:16215733-16215752 None:intergenic 45.0%
CACCATATAAAGCAAGCGCA+AGG + Chr1:16212788-16212807 None:intergenic 45.0%
CAGGAAATTGCTCCAGATCA+TGG + Chr1:16216558-16216577 None:intergenic 45.0%
CCAACTCATCCATCATCATC+TGG + Chr1:16215280-16215299 None:intergenic 45.0%
CCAGTGAGTAAAGCAACAGT+TGG + Chr1:16211109-16211128 None:intergenic 45.0%
CGATTGAAATTTCTCCGGTC+TGG + Chr1:16211272-16211291 None:intergenic 45.0%
CGGTTTCCAGGATACAATTG+TGG - Chr1:16215401-16215420 MsG0180001116.01.T01:intron 45.0%
CTACCTAGGCAGTGCTTAAA+AGG - Chr1:16212953-16212972 MsG0180001116.01.T01:intron 45.0%
CTCAGTCGGAGAATGTTAGA+TGG - Chr1:16211785-16211804 MsG0180001116.01.T01:intron 45.0%
CTCGACATTGTACAGAACTC+CGG - Chr1:16210173-16210192 MsG0180001116.01.T01:intron 45.0%
CTTAAGTGCTTCCCATGATC+TGG - Chr1:16216543-16216562 MsG0180001116.01.T01:intron 45.0%
GACCTATTATTACGTGGACC+TGG - Chr1:16215728-16215747 MsG0180001116.01.T01:CDS 45.0%
GACTTGATCAATCACCTAGC+AGG + Chr1:16216618-16216637 None:intergenic 45.0%
GCCCCACATTGGATGAAATA+TGG + Chr1:16214057-16214076 None:intergenic 45.0%
GCTGTCTGCAAACAAACTGT+GGG + Chr1:16211304-16211323 None:intergenic 45.0%
GCTTGCGTTGCTTGAAAACT+TGG - Chr1:16211066-16211085 MsG0180001116.01.T01:intron 45.0%
GGGAAGTGACAAAGGATTTG+AGG - Chr1:16214499-16214518 MsG0180001116.01.T01:intron 45.0%
GTACTGGAGCAATCATCAGA+TGG - Chr1:16215686-16215705 MsG0180001116.01.T01:CDS 45.0%
GTAGTATCTCTAGTCGACGT+AGG + Chr1:16212937-16212956 None:intergenic 45.0%
GTCGACTAGAGATACTACCT+AGG - Chr1:16212939-16212958 MsG0180001116.01.T01:intron 45.0%
GTTGCTTGAAAACTTGGACG+AGG - Chr1:16211072-16211091 MsG0180001116.01.T01:intron 45.0%
GTTTGAACAGGAATCCTTCC+TGG + Chr1:16214467-16214486 None:intergenic 45.0%
TAGGCAGTGCTTAAAAGGCT+TGG - Chr1:16212958-16212977 MsG0180001116.01.T01:intron 45.0%
TATTACCCACAACGGTCATC+AGG - Chr1:16211670-16211689 MsG0180001116.01.T01:CDS 45.0%
TATTCCCTGATGACCGTTGT+GGG + Chr1:16211678-16211697 None:intergenic 45.0%
TCAACACAAGCCTCTTGTTC+AGG + Chr1:16213174-16213193 None:intergenic 45.0%
TCCAACACTCACACTTATGC+TGG + Chr1:16212112-16212131 None:intergenic 45.0%
TCCAGCATAAGTGTGAGTGT+TGG - Chr1:16212108-16212127 MsG0180001116.01.T01:intron 45.0%
TGATTACACGTTCAACCTGC+TGG - Chr1:16210430-16210449 MsG0180001116.01.T01:CDS 45.0%
TGGATTGCAACCAACTCAGT+TGG + Chr1:16211031-16211050 None:intergenic 45.0%
TGGTGATATGTCACTGACAC+AGG - Chr1:16212803-16212822 MsG0180001116.01.T01:intron 45.0%
TTCTGTGGTCCAGCATAATG+GGG - Chr1:16212300-16212319 MsG0180001116.01.T01:intron 45.0%
TTGCTCACCAAAGCAGTTTG+AGG - Chr1:16212031-16212050 MsG0180001116.01.T01:intron 45.0%
TTGGCTATACTGGAAGCAAC+CGG - Chr1:16211828-16211847 MsG0180001116.01.T01:intron 45.0%
TTTCAAACGATGAAGGCCAC+TGG + Chr1:16215666-16215685 None:intergenic 45.0%
! ACGCTCTGGATGTTTAGTCT+TGG - Chr1:16213082-16213101 MsG0180001116.01.T01:intron 45.0%
! ACGTTAGGGAAGTTTAGGAC+TGG - Chr1:16215464-16215483 MsG0180001116.01.T01:intron 45.0%
! ATCTTCAATTTCGAGTCCGG+AGG - Chr1:16212677-16212696 MsG0180001116.01.T01:intron 45.0%
! ATGGATGAGTTGGAAGATGG+GGG - Chr1:16215287-16215306 MsG0180001116.01.T01:intron 45.0%
! CGCTCTGGATGTTTAGTCTT+GGG - Chr1:16213083-16213102 MsG0180001116.01.T01:intron 45.0%
! CGCTTTGGTGTGATTCAAAG+AGG - Chr1:16211369-16211388 MsG0180001116.01.T01:CDS 45.0%
! GATGGATGAGTTGGAAGATG+GGG - Chr1:16215286-16215305 MsG0180001116.01.T01:intron 45.0%
! GCAGGTTGAACGTGTAATCA+AGG + Chr1:16210430-16210449 None:intergenic 45.0%
! GGGTTTTTGCCAGATGATGA+TGG - Chr1:16215268-16215287 MsG0180001116.01.T01:intron 45.0%
! TCATGAATCCAGTACCGAAC+AGG + Chr1:16210034-16210053 None:intergenic 45.0%
! TCGGTGCCTTATTCATACCT+TGG - Chr1:16211878-16211897 MsG0180001116.01.T01:intron 45.0%
! TGCAGACAGCGTTGAATTCT+CGG - Chr1:16211314-16211333 MsG0180001116.01.T01:CDS 45.0%
! TGTTCCAGATGCATCGATGA+TGG - Chr1:16215535-16215554 MsG0180001116.01.T01:intron 45.0%
! TGTTCGGTACTGGATTCATG+AGG - Chr1:16210033-16210052 MsG0180001116.01.T01:three_prime_UTR 45.0%
!! AAGCCTTTTAAGCACTGCCT+AGG + Chr1:16212959-16212978 None:intergenic 45.0%
!! ACTAAACATCCAGAGCGTTG+AGG + Chr1:16213080-16213099 None:intergenic 45.0%
!! CCAACTGTTGCTTTACTCAC+TGG - Chr1:16211106-16211125 MsG0180001116.01.T01:intron 45.0%
!! CCAGATGATGATGGATGAGT+TGG - Chr1:16215277-16215296 MsG0180001116.01.T01:intron 45.0%
!! TTTGATGGTTCTGGTGAGCT+TGG + Chr1:16210244-16210263 None:intergenic 45.0%
!!! AATCCGCGCTTGTTTTAGTG+GGG + Chr1:16211137-16211156 None:intergenic 45.0%
!!! TTTGTTTTAGCAACTGCGGC+CGG - Chr1:16213722-16213741 MsG0180001116.01.T01:intron 45.0%
AATAGTGGCAGGACATGTCC+AGG - Chr1:16213920-16213939 MsG0180001116.01.T01:intron 50.0%
ACCATCGAGGGAAGTGACAA+AGG - Chr1:16214491-16214510 MsG0180001116.01.T01:intron 50.0%
ACTGCTTTGGTGAGCAAACC+TGG + Chr1:16212028-16212047 None:intergenic 50.0%
ACTGGCAACTGTCAGTCACT+AGG + Chr1:16210792-16210811 None:intergenic 50.0%
AGAAGACGACATTGATCCGG+TGG + Chr1:16210594-16210613 None:intergenic 50.0%
AGGGACACATAGATAGAGGG+AGG + Chr1:16212870-16212889 None:intergenic 50.0%
AGTTGCTACCTGTTCGGTAC+TGG - Chr1:16210023-16210042 MsG0180001116.01.T01:three_prime_UTR 50.0%
CAACCCCACTAAAACAAGCG+CGG - Chr1:16211131-16211150 MsG0180001116.01.T01:intron 50.0%
CAATCACCTAGCAGGCAAAG+CGG + Chr1:16216610-16216629 None:intergenic 50.0%
CCAAGCTCCAGTTTAAGTGC+AGG + Chr1:16216577-16216596 None:intergenic 50.0%
CCTGCACTTAAACTGGAGCT+TGG - Chr1:16216574-16216593 MsG0180001116.01.T01:intron 50.0%
CGCTGTCTGCAAACAAACTG+TGG + Chr1:16211305-16211324 None:intergenic 50.0%
CTATCTCCTTTGATGCCAGC+AGG + Chr1:16210448-16210467 None:intergenic 50.0%
CTGATGTAGAATGAGCCAGC+TGG + Chr1:16214221-16214240 None:intergenic 50.0%
CTGGCAACTGTCAGTCACTA+GGG + Chr1:16210791-16210810 None:intergenic 50.0%
GACACATAGATAGAGGGAGG+AGG + Chr1:16212867-16212886 None:intergenic 50.0%
GCAGACATGGCAAGAACATG+TGG + Chr1:16212747-16212766 None:intergenic 50.0%
GCCCAATTACACCAACTCAG+GGG - Chr1:16215587-16215606 MsG0180001116.01.T01:intron 50.0%
GGCACAACACTTGGATGTTG+TGG + Chr1:16211477-16211496 None:intergenic 50.0%
GGCCCAATTACACCAACTCA+GGG - Chr1:16215586-16215605 MsG0180001116.01.T01:intron 50.0%
GGCGTTCTACTTTCCACTAC+TGG + Chr1:16213773-16213792 None:intergenic 50.0%
GTACTGGATTCATGAGGCCA+GGG - Chr1:16210039-16210058 MsG0180001116.01.T01:three_prime_UTR 50.0%
GTCTCGAGGTAGTTCTCAGT+CGG - Chr1:16211771-16211790 MsG0180001116.01.T01:intron 50.0%
GTTCAACCTGCTGGCATCAA+AGG - Chr1:16210439-16210458 MsG0180001116.01.T01:CDS 50.0%
TCCAACACTCCCCATTATGC+TGG + Chr1:16212312-16212331 None:intergenic 50.0%
TGAACAGGAATCCTTCCTGG+TGG + Chr1:16214464-16214483 None:intergenic 50.0%
TGAGAACTACCTCGAGACCA+AGG + Chr1:16211769-16211788 None:intergenic 50.0%
TGGCCCAATTACACCAACTC+AGG - Chr1:16215585-16215604 MsG0180001116.01.T01:intron 50.0%
TGTGCTTCCATAGGCACAGT+AGG - Chr1:16210088-16210107 MsG0180001116.01.T01:three_prime_UTR 50.0%
TTCTTGCCAAGCAAGTCACC+AGG + Chr1:16215749-16215768 None:intergenic 50.0%
! ACAAGCGCGGATTATTCGCA+AGG - Chr1:16211144-16211163 MsG0180001116.01.T01:intron 50.0%
! ATGTTGCAGGGTATCCAGAC+CGG - Chr1:16211255-16211274 MsG0180001116.01.T01:CDS 50.0%
! CAGATAACCGACTTACCACC+AGG - Chr1:16214446-16214465 MsG0180001116.01.T01:intron 50.0%
! GTTATCTCAGACCGGTTTCC+AGG - Chr1:16215389-16215408 MsG0180001116.01.T01:intron 50.0%
! TAACCGACTTACCACCAGGA+AGG - Chr1:16214450-16214469 MsG0180001116.01.T01:intron 50.0%
! TCCAGCATAATGGGGAGTGT+TGG - Chr1:16212308-16212327 MsG0180001116.01.T01:intron 50.0%
! TCCTTTGTCACTTCCCTCGA+TGG + Chr1:16214495-16214514 None:intergenic 50.0%
!! ATAAGGCACCGAGTGTTGAC+AGG + Chr1:16211870-16211889 None:intergenic 50.0%
!! ATGTTTAGTCTTGGGCGCGA+GGG - Chr1:16213091-16213110 MsG0180001116.01.T01:intron 50.0%
!! ATTGCCGTCGACTTCCAATC+TGG + Chr1:16215804-16215823 None:intergenic 50.0%
!! GCCCCTGAGTTGGTGTAATT+GGG + Chr1:16215591-16215610 None:intergenic 50.0%
AAAGCAAGCGCAAGGGTCCT+TGG + Chr1:16212780-16212799 None:intergenic 55.0%
AAGCAAGCGCAAGGGTCCTT+GGG + Chr1:16212779-16212798 None:intergenic 55.0%
AAGGTTTGGGTGGAAGCCAC+CGG - Chr1:16210575-16210594 MsG0180001116.01.T01:intron 55.0%
AGACGCACATGTTGCTGCAC+TGG - Chr1:16215832-16215851 MsG0180001116.01.T01:intron 55.0%
ATTACATGGGGCGCGTGTCA+TGG - Chr1:16213299-16213318 MsG0180001116.01.T01:intron 55.0%
CATCAATCACACGACCCTGG+TGG + Chr1:16214773-16214792 None:intergenic 55.0%
CTACGAGCCTACTGTGCCTA+TGG + Chr1:16210098-16210117 None:intergenic 55.0%
CTCGGCCTTACGTATTGCTG+TGG - Chr1:16211332-16211351 MsG0180001116.01.T01:CDS 55.0%
GATAGCGCAGCTACCGTCAA+CGG - Chr1:16210521-16210540 MsG0180001116.01.T01:intron 55.0%
GCACATCAATCACACGACCC+TGG + Chr1:16214776-16214795 None:intergenic 55.0%
GGCCTTACGTATTGCTGTGG+TGG - Chr1:16211335-16211354 MsG0180001116.01.T01:CDS 55.0%
GTGGATGAGCAGCATCGCTT+TGG - Chr1:16211354-16211373 MsG0180001116.01.T01:CDS 55.0%
TGGAAACGGCAGCGGAATAG+TGG - Chr1:16213905-16213924 MsG0180001116.01.T01:intron 55.0%
TGGGATGGGAGTAGCAGACA+TGG + Chr1:16212760-16212779 None:intergenic 55.0%
TGTCTGCTACTCCCATCCCA+AGG - Chr1:16212760-16212779 MsG0180001116.01.T01:intron 55.0%
! AGAGTCTGGTTCGATCCTCC+TGG + Chr1:16213941-16213960 None:intergenic 55.0%
! GGTACTGGATTCATGAGGCC+AGG - Chr1:16210038-16210057 MsG0180001116.01.T01:three_prime_UTR 55.0%
! TGACTCATGGGGGCATGTCA+TGG - Chr1:16213341-16213360 MsG0180001116.01.T01:intron 55.0%
! TGGGGGCATGTCATGGATGT+TGG - Chr1:16213348-16213367 MsG0180001116.01.T01:intron 55.0%
!! GATGGTTCTGGTGAGCTTGG+TGG + Chr1:16210241-16210260 None:intergenic 55.0%
!! GATGTTTAGTCTTGGGCGCG+AGG - Chr1:16213090-16213109 MsG0180001116.01.T01:intron 55.0%
!! GGCCCCTGAGTTGGTGTAAT+TGG + Chr1:16215592-16215611 None:intergenic 55.0%
AACGGCAGCGGAATAGTGGC+AGG - Chr1:16213909-16213928 MsG0180001116.01.T01:intron 60.0%
AAGCGCAAGGGTCCTTGGGA+TGG + Chr1:16212775-16212794 None:intergenic 60.0%
AGCGCAAGGGTCCTTGGGAT+GGG + Chr1:16212774-16212793 None:intergenic 60.0%
AGGCCAGGGAGAGGATGAAG+GGG - Chr1:16210053-16210072 MsG0180001116.01.T01:three_prime_UTR 60.0%
AGTGGCAGGACATGTCCAGG+AGG - Chr1:16213923-16213942 MsG0180001116.01.T01:intron 60.0%
GACACGTGTCAGTCAGCCAG+AGG + Chr1:16210758-16210777 None:intergenic 60.0%
GAGGCCAGGGAGAGGATGAA+GGG - Chr1:16210052-16210071 MsG0180001116.01.T01:three_prime_UTR 60.0%
GCAGAAGCAGCACGAAGCTG+AGG + Chr1:16215359-16215378 None:intergenic 60.0%
GCGACGACAATGGCCAGTAG+TGG - Chr1:16213757-16213776 MsG0180001116.01.T01:intron 60.0%
GCTGGTCGTAGCGACGACAA+TGG - Chr1:16213747-16213766 MsG0180001116.01.T01:intron 60.0%
GCTTGCACTCCTCAACGCTC+TGG - Chr1:16213068-16213087 MsG0180001116.01.T01:intron 60.0%
GGAGGGAACCGGCAAGGTTT+GGG - Chr1:16210562-16210581 MsG0180001116.01.T01:intron 60.0%
GGATTCATGAGGCCAGGGAG+AGG - Chr1:16210044-16210063 MsG0180001116.01.T01:three_prime_UTR 60.0%
GGCTTCCACCCAAACCTTGC+CGG + Chr1:16210573-16210592 None:intergenic 60.0%
GTACAGAACTCCGGCCACCA+CGG - Chr1:16210182-16210201 MsG0180001116.01.T01:intron 60.0%
TGAGGCCAGGGAGAGGATGA+AGG - Chr1:16210051-16210070 MsG0180001116.01.T01:three_prime_UTR 60.0%
TGGAGGGAACCGGCAAGGTT+TGG - Chr1:16210561-16210580 MsG0180001116.01.T01:intron 60.0%
TGTTGTGGAGGGAACCGGCA+AGG - Chr1:16210556-16210575 MsG0180001116.01.T01:intron 60.0%
! AGACAGCCGCTTTGCCTGCT+AGG - Chr1:16216601-16216620 MsG0180001116.01.T01:intron 60.0%
! GCCTTGTTCCGCGTCCAACT+CGG + Chr1:16215613-16215632 None:intergenic 60.0%
!! CGTGGACCTGGTGACTTGCT+TGG - Chr1:16215740-16215759 MsG0180001116.01.T01:intron 60.0%
!! GTTTTAGCAACTGCGGCCGG+TGG - Chr1:16213725-16213744 MsG0180001116.01.T01:intron 60.0%
ACCGCGACCTCCACCGTTGA+CGG + Chr1:16210537-16210556 None:intergenic 65.0%
ACCGTCAACGGTGGAGGTCG+CGG - Chr1:16210533-16210552 MsG0180001116.01.T01:intron 65.0%
AGCGCAGCTACCGTCAACGG+TGG - Chr1:16210524-16210543 MsG0180001116.01.T01:intron 65.0%
CACCAACTCAGGGGCCGAGT+TGG - Chr1:16215596-16215615 MsG0180001116.01.T01:intron 65.0%
CCAGGGAGAGGATGAAGGGG+GGG - Chr1:16210056-16210075 MsG0180001116.01.T01:three_prime_UTR 65.0%
GCAGCTACCGTCAACGGTGG+AGG - Chr1:16210527-16210546 MsG0180001116.01.T01:intron 65.0%
GCCAGGGAGAGGATGAAGGG+GGG - Chr1:16210055-16210074 MsG0180001116.01.T01:three_prime_UTR 65.0%
GGCCAGGGAGAGGATGAAGG+GGG - Chr1:16210054-16210073 MsG0180001116.01.T01:three_prime_UTR 65.0%
GGGAACCGGCAAGGTTTGGG+TGG - Chr1:16210565-16210584 MsG0180001116.01.T01:intron 65.0%
GTCCAACTCGGCCCCTGAGT+TGG + Chr1:16215601-16215620 None:intergenic 65.0%
TCGTCGCTACGACCAGCCAC+CGG + Chr1:16213744-16213763 None:intergenic 65.0%
! CTTGGTGGCTGCTCCACTCG+CGG + Chr1:16210226-16210245 None:intergenic 65.0%
! GCCGAGTTGGACGCGGAACA+AGG - Chr1:16215609-16215628 MsG0180001116.01.T01:CDS 65.0%
!! CGCGGTGTTGTGGAGGGAAC+CGG - Chr1:16210551-16210570 MsG0180001116.01.T01:intron 65.0%
!! GGAGGTCGCGGTGTTGTGGA+GGG - Chr1:16210545-16210564 MsG0180001116.01.T01:intron 65.0%
!! TGGAGGTCGCGGTGTTGTGG+AGG - Chr1:16210544-16210563 MsG0180001116.01.T01:intron 65.0%
CCCCCCCTTCATCCTCTCCC+TGG + Chr1:16210059-16210078 None:intergenic 70.0%
TAGCAACTGCGGCCGGTGGC+TGG - Chr1:16213729-16213748 MsG0180001116.01.T01:intron 70.0%
TCCACTCGCGGTGGTCGTGG+TGG + Chr1:16210214-16210233 None:intergenic 70.0%
TGCTCCACTCGCGGTGGTCG+TGG + Chr1:16210217-16210236 None:intergenic 70.0%
! CGGTGGAGGTCGCGGTGTTG+TGG - Chr1:16210541-16210560 MsG0180001116.01.T01:intron 70.0%
! CTCAGGGGCCGAGTTGGACG+CGG - Chr1:16215602-16215621 MsG0180001116.01.T01:intron 70.0%
CGCGGTGGTCGTGGTGGCAG+AGG + Chr1:16210208-16210227 None:intergenic 75.0%
CGTGGTGGCAGAGGCCGTGG+TGG + Chr1:16210199-16210218 None:intergenic 75.0%
GCCACCACGACCACCGCGAG+TGG - Chr1:16210210-16210229 MsG0180001116.01.T01:intron 75.0%
GGTCGTGGTGGCAGAGGCCG+TGG + Chr1:16210202-16210221 None:intergenic 75.0%
GGTGGCTGCTCCACTCGCGG+TGG + Chr1:16210223-16210242 None:intergenic 75.0%
GTGGCAGAGGCCGTGGTGGC+CGG + Chr1:16210195-16210214 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr1 gene 16210007 16217009 16210007 ID=MsG0180001116.01;Name=MsG0180001116.01
Chr1 mRNA 16210007 16217009 16210007 ID=MsG0180001116.01.T01;Parent=MsG0180001116.01;Name=MsG0180001116.01.T01;_AED=0.44;_eAED=0.50;_QI=0|0.62|0.66|1|0.87|0.77|9|313|470
Chr1 exon 16210007 16210185 16210007 ID=MsG0180001116.01.T01:exon:31270;Parent=MsG0180001116.01.T01
Chr1 exon 16210252 16210478 16210252 ID=MsG0180001116.01.T01:exon:31269;Parent=MsG0180001116.01.T01
Chr1 exon 16211163 16211735 16211163 ID=MsG0180001116.01.T01:exon:31268;Parent=MsG0180001116.01.T01
Chr1 exon 16212484 16212567 16212484 ID=MsG0180001116.01.T01:exon:31267;Parent=MsG0180001116.01.T01
Chr1 exon 16214192 16214350 16214192 ID=MsG0180001116.01.T01:exon:31266;Parent=MsG0180001116.01.T01
Chr1 exon 16215606 16215752 16215606 ID=MsG0180001116.01.T01:exon:31265;Parent=MsG0180001116.01.T01
Chr1 exon 16215851 16216003 16215851 ID=MsG0180001116.01.T01:exon:31264;Parent=MsG0180001116.01.T01
Chr1 exon 16216385 16216517 16216385 ID=MsG0180001116.01.T01:exon:31263;Parent=MsG0180001116.01.T01
Chr1 exon 16216939 16217009 16216939 ID=MsG0180001116.01.T01:exon:31262;Parent=MsG0180001116.01.T01
Chr1 CDS 16216939 16217009 16216939 ID=MsG0180001116.01.T01:cds;Parent=MsG0180001116.01.T01
Chr1 CDS 16216385 16216517 16216385 ID=MsG0180001116.01.T01:cds;Parent=MsG0180001116.01.T01
Chr1 CDS 16215851 16216003 16215851 ID=MsG0180001116.01.T01:cds;Parent=MsG0180001116.01.T01
Chr1 CDS 16215606 16215752 16215606 ID=MsG0180001116.01.T01:cds;Parent=MsG0180001116.01.T01
Chr1 CDS 16214192 16214350 16214192 ID=MsG0180001116.01.T01:cds;Parent=MsG0180001116.01.T01
Chr1 CDS 16212484 16212567 16212484 ID=MsG0180001116.01.T01:cds;Parent=MsG0180001116.01.T01
Chr1 CDS 16211163 16211735 16211163 ID=MsG0180001116.01.T01:cds;Parent=MsG0180001116.01.T01
Chr1 CDS 16210386 16210478 16210386 ID=MsG0180001116.01.T01:cds;Parent=MsG0180001116.01.T01
Chr1 three_prime_UTR 16210252 16210385 16210252 ID=MsG0180001116.01.T01:three_prime_utr;Parent=MsG0180001116.01.T01
Chr1 three_prime_UTR 16210007 16210185 16210007 ID=MsG0180001116.01.T01:three_prime_utr;Parent=MsG0180001116.01.T01
Gene Sequence

>MsG0180001116.01.T01

ATGAGAGATGGAGTAAAGTTGCTACCTGTTCGGTACTGGATTCATGAGGCCAGGGAGAGGATGAAGGGGGGAAAAGGAGTGCGATGCGAAAACGATAGCGCAGCTACCGTCAACGGTGGAGGTCGCGGTGTTGTGGAGGGAACCGGCAAGGTTTGGGTGGAAGCCACCGGATCAATGTCGTCTTCTGATACCATAATAGAAAATGCGGCTTTCATGGTTCCAACTGAGTTGGTTGCAATCCAGCATTATAAACACTTGCTTGCGTTGCTTGAAAACTTGGACGAGGTCAAGTTCAAGCCAACTGTTGCTTTACTCACTGGTTCAACCCCACTAAAACAAGCGCGGATTATTCGCAAGGGTATCCAGACCGGAGAAATTTCAATCGTCATTGGAACCCACAGTTTGTTTGCAGACAGCGTTGAATTCTCGGCCTTACGTATTGCTGTGGTGGATGAGCAGCATCGCTTTGGTGTGATTCAAAGAGGAAGATTTAACAGTAAGGTGTTATTTTATAAATCTTCAATTTCGAGTCCGGAGGATGCTATTACAGACAAGTCCTCAAAGACTGATGATTATATGGCTCCACATGTTCTTGCCATGTCTGCTACTCCCATCCCAAGGACCCTTGCGCTTGCTTTATATGGTGATATGTCACTGACACAGATAACCGACTTACCACCAGGAAGGATTCCTGTTCAAACATATACCATCGAGGGAAGTGACAAAGGATTTGAGGATGCCTACAAGATGATGATGGATGAGTTGGAAGATGGGGGAAAAGTTTATCTTGTCTACCCAATTATCGAACTTTCAGAGCAGTTACCTCAGCTTCGTGCTGCTTCTGCAGATCTCAAAGTTATCTCAGACCGGTTTCCAGGATACAATTGTGGTTTATTACATGGGAAAATGAGAAGTGAAGAAAAAGAAGAAACGTTAGGGAAGTTTAGGACTGGAGAATTGAATATACTACTTGCCACTCAAGTAATTGAAATTGGTGTTGATGTTCCAGATGCATCGATGATGGTTGTGATGAATTCTGAGAGGTTTGGAATGGCCCAATTACACCAACTCAGGGGCCGAGTTGGACGCGGAACAAGGCAGTCAAAATGTATATTAATATCATCAACTGCCAGTGGCCTTCATCGTTTGAAAGTACTGGAGCAATCATCAGATGGGTTTCATCTTGCTAATATGGACCTATTATTACGTGGACCTGGTGACTTGCTTGGCAAGAAACAATCTGGACATCTTCCCGAGTTTCCTATTACCAGATTGGAAGTCGACGGCAATATTTTACAAGACGCACATGTTGCTGCACTGAAAATCTTAAGTGCTTCCCATGATCTGGAGCAATTTCCTGCACTTAAACTGGAGCTTGGCATGAGACAGCCGCTTTGCCTGCTAGGTGATTGA

Protein sequence

>MsG0180001116.01.T01

MRDGVKLLPVRYWIHEARERMKGGKGVRCENDSAATVNGGGRGVVEGTGKVWVEATGSMSSSDTIIENAAFMVPTELVAIQHYKHLLALLENLDEVKFKPTVALLTGSTPLKQARIIRKGIQTGEISIVIGTHSLFADSVEFSALRIAVVDEQHRFGVIQRGRFNSKVLFYKSSISSPEDAITDKSSKTDDYMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPVQTYTIEGSDKGFEDAYKMMMDELEDGGKVYLVYPIIELSEQLPQLRAASADLKVISDRFPGYNCGLLHGKMRSEEKEETLGKFRTGELNILLATQVIEIGVDVPDASMMVVMNSERFGMAQLHQLRGRVGRGTRQSKCILISSTASGLHRLKVLEQSSDGFHLANMDLLLRGPGDLLGKKQSGHLPEFPITRLEVDGNILQDAHVAALKILSASHDLEQFPALKLELGMRQPLCLLGD*