AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180004773.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180004773.01.T02 MTR_1g086585 96.429 56 2 0 11 66 196 251 1.17e-34 117
MsG0180004773.01.T01 MTR_1g086590 87.973 449 14 2 1 449 1 409 0.0 791
MsG0180004773.01.T01 MTR_1g086590 87.778 450 15 2 1 450 1 410 0.0 791
MsG0180004773.01.T01 MTR_1g086590 87.260 416 13 2 1 416 1 376 0.0 725
MsG0180004773.01.T01 MTR_1g086590 85.675 363 12 2 1 363 1 323 0.0 614
MsG0180004773.01.T01 MTR_7g109870 62.876 466 105 6 1 450 1 414 0.0 563
MsG0180004773.01.T01 MTR_7g109870 62.340 470 105 7 1 450 1 418 0.0 558
MsG0180004773.01.T01 MTR_1g086585 88.430 121 10 1 448 564 14 134 1.70e-68 220
MsG0180004773.01.T01 MTR_1g086585 88.430 121 10 1 448 564 14 134 7.96e-68 220
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180004773.01.T02 AT4G01935 74.545 55 14 0 11 65 195 249 1.02e-23 89.7
MsG0180004773.01.T01 AT2G47210 54.797 469 136 12 2 449 5 418 5.99e-161 466
MsG0180004773.01.T01 AT2G47210 54.797 469 136 12 2 449 5 418 5.99e-161 466
MsG0180004773.01.T01 AT2G47210 54.797 469 136 12 2 449 5 418 5.99e-161 466
MsG0180004773.01.T01 AT4G01935 65.979 97 32 1 469 564 37 133 1.94e-32 125

Find 214 sgRNAs with CRISPR-Local

Find 800 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCACATCCATGGAAATATTT+AGG 0.080842 1:+82583693 None:intergenic
GTATGAAATCAAACATAATT+TGG 0.146297 1:-82573225 MsG0180004773.01.T01:three_prime_UTR
AGTAATGCTTTACTTCATTA+AGG 0.194939 1:+82573006 None:intergenic
TTATCTTATAAACTTGAAAT+TGG 0.207328 1:-82573321 MsG0180004773.01.T01:three_prime_UTR
GTATTTGATTATAAATTTAT+AGG 0.222630 1:-82573299 MsG0180004773.01.T01:three_prime_UTR
CACATCCATGGAAATATTTA+GGG 0.243709 1:+82583694 None:intergenic
TGGACTAGAATTAATGTCTT+TGG 0.248033 1:+82572502 None:intergenic
TTGATAGGTTCCTCCCTTGC+TGG 0.255596 1:-82573496 MsG0180004773.01.T01:intron
CAGCAGATTCAAATTGTAAA+TGG 0.262132 1:-82581056 MsG0180004773.01.T01:intron
AAGTGCCATAGTTAATAATT+TGG 0.266555 1:+82574200 None:intergenic
CAGGGGAAAGAATTGGTAAA+AGG 0.280477 1:-82576442 MsG0180004773.01.T01:CDS
CAAGCTAACATTGAAATCTT+TGG 0.287614 1:-82572888 MsG0180004773.01.T01:three_prime_UTR
ACCTAAACACATTATGCATT+TGG 0.289904 1:-82572479 MsG0180004773.01.T01:three_prime_UTR
TATGAAATCAAACATAATTT+GGG 0.291399 1:-82573224 MsG0180004773.01.T01:three_prime_UTR
TTCAGGTCTTACATTAATCT+TGG 0.295049 1:+82572450 None:intergenic
GTTCCAGATAACACAAGTTC+TGG 0.296830 1:-82576571 MsG0180004773.01.T01:CDS
TTATAGGTGTATGCACTTAC+TGG 0.300360 1:-82583519 MsG0180004773.01.T01:intron
CTCGACGTTGTCTGCTATTC+CGG 0.310376 1:+82573141 None:intergenic
CTTTCAGGTTCCTTCACCTT+TGG 0.316840 1:-82572920 MsG0180004773.01.T01:three_prime_UTR
TTTGTTTCAGCTGCAAAATA+AGG 0.323047 1:-82576833 MsG0180004773.01.T01:intron
TCTCACAGTTTAAATTTGTT+TGG 0.329632 1:-82572977 MsG0180004773.01.T01:three_prime_UTR
TTCACCCTCTCATGCATTGT+TGG 0.330593 1:-82573055 MsG0180004773.01.T01:three_prime_UTR
CCTAAACACATTATGCATTT+GGG 0.336010 1:-82572478 MsG0180004773.01.T01:three_prime_UTR
CGAGGAGTATGAGAAATATT+TGG 0.337332 1:-82580846 MsG0180004773.01.T01:CDS
ATCAAACTTTGCTGGAACTT+GGG 0.341194 1:-82578121 MsG0180004773.01.T01:CDS
TTTCATATTGTTGTCGTGTT+TGG 0.344145 1:+82572713 None:intergenic
TCACCCTCTCATGCATTGTT+GGG 0.346406 1:-82573054 MsG0180004773.01.T01:three_prime_UTR
ATCTCCTGTGAAACGTTATA+TGG 0.347225 1:+82579350 None:intergenic
TAAATTTGTTTGGCTATTGA+TGG 0.352569 1:-82572967 MsG0180004773.01.T01:three_prime_UTR
CAGTTGATCTGTTTCCTCCT+TGG 0.354649 1:+82579826 None:intergenic
CCCAAATGCATAATGTGTTT+AGG 0.355683 1:+82572478 None:intergenic
AAAGCCTCCTTCAGACAAAA+AGG 0.356170 1:-82583448 MsG0180004773.01.T01:intron
ACGTGTTGATCAAACTTTGC+TGG 0.359797 1:-82578129 MsG0180004773.01.T01:CDS
TTTCCCTCATTCAGGTCATT+TGG 0.362778 1:-82581862 MsG0180004773.01.T01:intron
TTGATTTCATACAATGCGTT+TGG 0.363085 1:+82573236 None:intergenic
TGCAGTGGATCCACTTGTTC+AGG 0.368298 1:-82579529 MsG0180004773.01.T01:intron
ATGAAGCTGTAACGCTAGTT+TGG 0.368316 1:+82573890 None:intergenic
ATGCAATACCTTCTTTCATC+TGG 0.373692 1:-82574000 MsG0180004773.01.T01:intron
GATTGTAACTTAAAGATAGT+TGG 0.373750 1:+82572849 None:intergenic
AAACTAGCGTTACAGCTTCA+TGG 0.374325 1:-82573888 MsG0180004773.01.T01:CDS
GTAATGCTTTACTTCATTAA+GGG 0.376469 1:+82573007 None:intergenic
GATCAAACTTTGCTGGAACT+TGG 0.378095 1:-82578122 MsG0180004773.01.T01:CDS
ACAACGAAGTAGAAAATGAT+TGG 0.378418 1:+82574053 None:intergenic
GTAAATGGTGTTCCACCAAC+AGG 0.383590 1:-82581041 MsG0180004773.01.T01:CDS
CTGGTTTCAGGGGAAAGAAT+TGG 0.386698 1:-82576449 MsG0180004773.01.T01:intron
TGCATTTACCTTGTTATACT+TGG 0.387949 1:+82581004 None:intergenic
ATCATGGAAGGCACGACTAT+TGG 0.390462 1:+82578586 None:intergenic
TTCGGCACAGGATTCGTGTT+TGG 0.393428 1:-82573844 MsG0180004773.01.T01:CDS
GCTTTGTTTGAGAGAGGATC+AGG 0.395914 1:+82579306 None:intergenic
ATCCGTAGAAGATGGATTCC+TGG 0.400770 1:+82579554 None:intergenic
TGATAGGTTCCTCCCTTGCT+GGG 0.401780 1:-82573495 MsG0180004773.01.T01:intron
GGTGGAAGTTCTGTCTTTGA+TGG 0.403854 1:+82578607 None:intergenic
GCCCACTCCATACAAACATC+TGG 0.405704 1:-82573753 MsG0180004773.01.T01:CDS
TCTTCAACAGTTCGAGATGA+AGG 0.406013 1:+82579749 None:intergenic
CGTCACCAAATTATTAACTA+TGG 0.406105 1:-82574205 MsG0180004773.01.T01:intron
AGGAACCTGAAAGAAGAAAA+AGG 0.412639 1:+82572930 None:intergenic
CTTGCTGAATCTTCAGAAAC+AGG 0.417237 1:-82576963 MsG0180004773.01.T01:intron
GGACAGAGTTAAACATAAAC+AGG 0.418315 1:-82574144 MsG0180004773.01.T01:intron
GTCCTTGCCATGCAGTATCC+CGG 0.421755 1:-82579590 MsG0180004773.01.T01:intron
AACCTATGCACTTGGACAAA+TGG 0.426661 1:-82578192 MsG0180004773.01.T01:CDS
TGAGTTGGATGTTGCTTCAA+AGG 0.427293 1:-82578677 MsG0180004773.01.T01:CDS
TTCCAGATAACACAAGTTCT+GGG 0.430784 1:-82576570 MsG0180004773.01.T01:CDS
CTTCAAATCTTCAATTGTGT+TGG 0.433084 1:-82574180 MsG0180004773.01.T01:intron
ATGTGTAGGGACTCGTTACT+TGG 0.434900 1:-82572643 MsG0180004773.01.T01:three_prime_UTR
ACTCCACACAGTACGCAAAC+GGG 0.436084 1:-82573950 MsG0180004773.01.T01:CDS
TGATCTTCAGCTTCACCATT+GGG 0.438327 1:-82581804 MsG0180004773.01.T01:intron
GATTTATTGTTATAGCTGAT+AGG 0.439661 1:-82579775 MsG0180004773.01.T01:CDS
TTGCAGCAGCAGAGTTCCTA+TGG 0.440373 1:-82573105 MsG0180004773.01.T01:three_prime_UTR
TGCATTATCTGTCGATATCA+TGG 0.441207 1:+82578570 None:intergenic
TCGAACTGTTGAAGAATTGA+AGG 0.443297 1:-82579741 MsG0180004773.01.T01:CDS
TTGCAGTGAGTACTTACATC+AGG 0.450887 1:+82573376 None:intergenic
AACCTACCCAGATGTTTGTA+TGG 0.450973 1:+82573746 None:intergenic
TCCTGGCAATTAACATAGCC+CGG 0.451028 1:+82579571 None:intergenic
AACTCCACACAGTACGCAAA+CGG 0.451385 1:-82573951 MsG0180004773.01.T01:CDS
TATCAGCTATAACAATAAAT+CGG 0.454968 1:+82579777 None:intergenic
AAATCAACTGCTGGCATAAG+AGG 0.458830 1:+82583486 None:intergenic
TTGTTGAATGGAACATGGCC+AGG 0.462568 1:-82573079 MsG0180004773.01.T01:three_prime_UTR
GTTTGGCTATTGATGGCAAC+TGG 0.465023 1:-82572960 MsG0180004773.01.T01:three_prime_UTR
TAACTCGATGCTCGCACAAA+AGG 0.467163 1:-82574029 MsG0180004773.01.T01:intron
GGGTCACACTGCGAAACAAC+GGG 0.473685 1:-82576784 MsG0180004773.01.T01:CDS
TTTGCATCGAGGCGGAGATC+AGG 0.475049 1:-82576605 MsG0180004773.01.T01:CDS
AGGGGAAAGAATTGGTAAAA+GGG 0.484025 1:-82576441 MsG0180004773.01.T01:CDS
CGTGTGTCACTTTCACTCTT+CGG 0.485963 1:-82573862 MsG0180004773.01.T01:CDS
TCACTTTCACTCTTCGGCAC+AGG 0.486315 1:-82573856 MsG0180004773.01.T01:CDS
CACCATGAGCATAGCTCAGT+TGG 0.494164 1:-82572295 MsG0180004773.01.T02:three_prime_UTR
TAACATTGAAATCTTTGGCC+AGG 0.494482 1:-82572883 MsG0180004773.01.T01:three_prime_UTR
ATGAATTCTATTCTATGTGT+AGG 0.494729 1:-82572657 MsG0180004773.01.T01:three_prime_UTR
AATGCATAATGTGTTTAGGT+TGG 0.496231 1:+82572482 None:intergenic
ACAGTTCTAATTTCATTCCC+AGG 0.497347 1:+82578883 None:intergenic
CTTGTTGCTTTGTTTGAGAG+AGG 0.497997 1:+82579300 None:intergenic
ATAAACCCTAAATATTTCCA+TGG 0.499501 1:-82583699 MsG0180004773.01.T01:exon
ATAAAATTGAATCAGCCTCA+TGG 0.501128 1:-82574116 MsG0180004773.01.T01:intron
TGATGGAGATACAGTTTCAC+CGG 0.502528 1:+82578624 None:intergenic
CCCGGGCTATGTTAATTGCC+AGG 0.503662 1:-82579572 MsG0180004773.01.T01:CDS
ATGGAAGGCACGACTATTGG+TGG 0.505977 1:+82578589 None:intergenic
GTATATTGGAAATCCTGAAA+AGG 0.508992 1:-82574229 MsG0180004773.01.T01:intron
CAATCTGCAAGCTCATCAGC+TGG 0.509587 1:-82578167 MsG0180004773.01.T01:CDS
GTCGACCACACCTGAACAAG+TGG 0.512934 1:+82579519 None:intergenic
ATGATCTTCAGCTTCACCAT+TGG 0.514864 1:-82581805 MsG0180004773.01.T01:CDS
CAACATCCAACTCAGACTCT+CGG 0.518492 1:+82578686 None:intergenic
AACATCCAACTCAGACTCTC+GGG 0.521677 1:+82578687 None:intergenic
ACGACAACAATATGAAATGT+TGG 0.522219 1:-82572707 MsG0180004773.01.T01:three_prime_UTR
ATGAGCATAGCTCAGTTGGC+AGG 0.523612 1:-82572291 MsG0180004773.01.T02:three_prime_UTR
TCAAACTTTGCTGGAACTTG+GGG 0.524390 1:-82578120 MsG0180004773.01.T01:intron
TTCAACTCTACCTTGATGAG+AGG 0.524503 1:-82573446 MsG0180004773.01.T01:CDS
GTGTTTGGTCCACTTCTCGA+TGG 0.525210 1:-82573829 MsG0180004773.01.T01:CDS
AGATACAGTTTCACCGGGGT+TGG 0.525293 1:+82578630 None:intergenic
TTATAAGCCTGAAAAGATGA+AGG 0.525798 1:+82573973 None:intergenic
TTGAAGGATCGATATTATAG+TGG 0.527157 1:-82579725 MsG0180004773.01.T01:intron
AACAGAGACAAATCAACTGC+TGG 0.529934 1:+82583477 None:intergenic
ACCCAGATGTTTGTATGGAG+TGG 0.533363 1:+82573751 None:intergenic
ATATAACGTTTCACAGGAGA+TGG 0.536143 1:-82579348 MsG0180004773.01.T01:CDS
TGTTTAAGACCCTCTCATCA+AGG 0.536972 1:+82573436 None:intergenic
ATGCATGAGAGGGTGAAGCC+TGG 0.537143 1:+82573061 None:intergenic
TGCCAGGAATCCATCTTCTA+CGG 0.537155 1:-82579556 MsG0180004773.01.T01:CDS
TGCAGGTCAATTTGAAACCA+AGG 0.539590 1:-82577042 MsG0180004773.01.T01:intron
CTTCAACAGTTCGAGATGAA+GGG 0.541369 1:+82579750 None:intergenic
CTAGAATTCTTCTCCTGAAG+TGG 0.542194 1:+82583635 None:intergenic
TCTTCTTAATTAATTTGTCA+CGG 0.543532 1:-82572592 MsG0180004773.01.T01:three_prime_UTR
TGAATTCTATTCTATGTGTA+GGG 0.545335 1:-82572656 MsG0180004773.01.T01:three_prime_UTR
CCCAGATGTTTGTATGGAGT+GGG 0.545906 1:+82573752 None:intergenic
ACTGCAACATCCGTAGAAGA+TGG 0.546115 1:+82579546 None:intergenic
GGCTCTGCTGATTGACAGCA+CGG 0.546704 1:+82573911 None:intergenic
CACCATTTGTCCAAGTGCAT+AGG 0.547944 1:+82578190 None:intergenic
GAACTCGTTTCGTACAAGTT+CGG 0.548080 1:-82573790 MsG0180004773.01.T01:CDS
TCCTTGCCATGCAGTATCCC+GGG 0.551210 1:-82579589 MsG0180004773.01.T01:intron
TCATTCAGGTCATTTGGCGA+TGG 0.553815 1:-82581856 MsG0180004773.01.T01:intron
AAGATTTCAATGTTAGCTTG+AGG 0.553858 1:+82572891 None:intergenic
CAAACCCAACAATGCATGAG+AGG 0.555759 1:+82573050 None:intergenic
TACCATGCGAAGAGAGGCTA+TGG 0.556004 1:+82578543 None:intergenic
CAAGCTCATCAGCTGGACTT+CGG 0.556264 1:-82578160 MsG0180004773.01.T01:CDS
ACAAGAGCGAAGAGATGAAG+AGG 0.556809 1:-82579282 MsG0180004773.01.T01:intron
TAAAACAACCCCAGCAAGGG+AGG 0.558692 1:+82573486 None:intergenic
AACTGTTTGACTTGTGTGAG+AGG 0.559257 1:-82579808 MsG0180004773.01.T01:CDS
TATTCAAGAACCTATGCACT+TGG 0.559755 1:-82578200 MsG0180004773.01.T01:CDS
AATCTAGACATGATACCTAC+AGG 0.560973 1:+82580818 None:intergenic
GATAGGTTCCTCCCTTGCTG+GGG 0.563080 1:-82573494 MsG0180004773.01.T01:intron
AAGGGGAACCAGATGAAAGA+AGG 0.569485 1:+82573992 None:intergenic
CAGTAAAACAACCCCAGCAA+GGG 0.570370 1:+82573483 None:intergenic
TAGGTGTATGCACTTACTGG+TGG 0.572395 1:-82583516 MsG0180004773.01.T01:CDS
AAAGAATAGTCCCCTGTTGG+TGG 0.572554 1:+82581029 None:intergenic
GGTCTTAAACAAAGTTCAAG+AGG 0.574160 1:-82573424 MsG0180004773.01.T01:CDS
GCAGGTCAATTTGAAACCAA+GGG 0.576834 1:-82577041 MsG0180004773.01.T01:intron
TTAACTTACCATGCGAAGAG+AGG 0.578824 1:+82578537 None:intergenic
TATAAGCCTGAAAAGATGAA+GGG 0.580458 1:+82573974 None:intergenic
GGAACCATATAACGTTTCAC+AGG 0.582270 1:-82579354 MsG0180004773.01.T01:CDS
TGCTGCTGCAAATAATATGT+AGG 0.583565 1:+82573117 None:intergenic
CCCACTCCATACAAACATCT+GGG 0.584936 1:-82573752 MsG0180004773.01.T01:intron
CTTTGTTTGAGAGAGGATCA+GGG 0.585863 1:+82579307 None:intergenic
GGTTGCCCGAGAGTCTGAGT+TGG 0.587360 1:-82578692 MsG0180004773.01.T01:CDS
ATCTTCTACGGATGTTGCAG+TGG 0.587379 1:-82579544 MsG0180004773.01.T01:CDS
CGGGTCACACTGCGAAACAA+CGG 0.588101 1:-82576785 MsG0180004773.01.T01:CDS
TACCATAGCCTCTCTTCGCA+TGG 0.588204 1:-82578545 MsG0180004773.01.T01:intron
AAACGAGTTCGACTCTCGAA+TGG 0.588877 1:+82573803 None:intergenic
TGAGCATAGCTCAGTTGGCA+GGG 0.589556 1:-82572290 None:intergenic
TCAACTCTACCTTGATGAGA+GGG 0.596716 1:-82573445 MsG0180004773.01.T01:CDS
GTTTCAGCTGCAAAATAAGG+AGG 0.600246 1:-82576830 MsG0180004773.01.T01:intron
ATTCTTCTCCTGAAGTGGGA+AGG 0.601079 1:+82583640 None:intergenic
CCTGGCAATTAACATAGCCC+GGG 0.603428 1:+82579572 None:intergenic
ATGAAATCAAACATAATTTG+GGG 0.604051 1:-82573223 MsG0180004773.01.T01:three_prime_UTR
AGTGCTGAACTATACAAAGC+CGG 0.608175 1:-82573160 MsG0180004773.01.T01:three_prime_UTR
CGAAACAACGGGAACACCAA+AGG 0.608995 1:-82576773 MsG0180004773.01.T01:intron
GATGGAGATACAGTTTCACC+GGG 0.610196 1:+82578625 None:intergenic
TTGTGCAAACGTTACAGAGA+GGG 0.610465 1:-82578653 MsG0180004773.01.T01:CDS
GAGGATAGTACCAAAGGTGA+AGG 0.610524 1:+82572910 None:intergenic
GCAAAAGAATAGTCCCCTGT+TGG 0.610779 1:+82581026 None:intergenic
TAAATGGTGTTCCACCAACA+GGG 0.611976 1:-82581040 MsG0180004773.01.T01:CDS
GCAGTAAAACAACCCCAGCA+AGG 0.612534 1:+82573482 None:intergenic
CTGCAAAATAAGGAGGCTGA+AGG 0.613211 1:-82576823 MsG0180004773.01.T01:CDS
TAGAATTCTTCTCCTGAAGT+GGG 0.615625 1:+82583636 None:intergenic
AGTTTATGTCGCTCAAACAG+AGG 0.616371 1:-82572558 MsG0180004773.01.T01:three_prime_UTR
TCCAGATAACACAAGTTCTG+GGG 0.616535 1:-82576569 MsG0180004773.01.T01:CDS
GAATGGAGTCCATCGAGAAG+TGG 0.618017 1:+82573820 None:intergenic
TGCAGTGAGTACTTACATCA+GGG 0.619167 1:+82573377 None:intergenic
TAGCTTGAGGATAGTACCAA+AGG 0.624101 1:+82572904 None:intergenic
TGCCAACTGAGCTATGCTCA+TGG 0.624427 1:+82572293 None:intergenic
ATGACACTTATAATTACATG+TGG 0.625416 1:-82579074 MsG0180004773.01.T01:CDS
TGCTGATTGACAGCACGGTG+AGG 0.625751 1:+82573916 None:intergenic
TTATCTGTCGATATCATGGA+AGG 0.626460 1:+82578574 None:intergenic
AAATATTTGGCAAATCCTGT+AGG 0.627893 1:-82580833 MsG0180004773.01.T01:CDS
AAGTTCGGAGCAATTGACAT+TGG 0.628907 1:-82573775 MsG0180004773.01.T01:CDS
CTGTTTCTGAAGATTCAGCA+AGG 0.629529 1:+82576964 None:intergenic
ATTAAGGGTATCTCAGCTAG+TGG 0.632261 1:+82573022 None:intergenic
CTCCACACAGTACGCAAACG+GGG 0.633266 1:-82573949 MsG0180004773.01.T01:CDS
AAACCCAACAATGCATGAGA+GGG 0.633565 1:+82573051 None:intergenic
TAACTCTGTCCACATAGTAG+TGG 0.635726 1:+82574156 None:intergenic
ATAAGCCTGAAAAGATGAAG+GGG 0.636223 1:+82573975 None:intergenic
CATAACAAGATACACGGACG+AGG 0.639523 1:-82580864 MsG0180004773.01.T01:CDS
GAATTCGTGATTAGAAAGAG+TGG 0.650216 1:-82583746 MsG0180004773.01.T01:five_prime_UTR
TCTTAATTAATTTGTCACGG+TGG 0.650683 1:-82572589 MsG0180004773.01.T01:three_prime_UTR
TAAAAGGGATCAAAAGCGCA+AGG 0.653952 1:-82576426 MsG0180004773.01.T01:intron
GTCTTAAACAAAGTTCAAGA+GGG 0.663204 1:-82573423 MsG0180004773.01.T01:CDS
GACCCCGTTTGCGTACTGTG+TGG 0.668600 1:+82573947 None:intergenic
ACGTTTCACAGGAGATGGAG+CGG 0.669816 1:-82579343 MsG0180004773.01.T01:CDS
CCAGATAACACAAGTTCTGG+GGG 0.671324 1:-82576568 MsG0180004773.01.T01:intron
ACTTATAATTACATGTGGAG+AGG 0.672237 1:-82579069 MsG0180004773.01.T01:CDS
TGCCGACAGCGTTTGCATCG+AGG 0.672897 1:-82576616 MsG0180004773.01.T01:intron
TCAGGAGAAGAATTCTAGCG+AGG 0.675024 1:-82583630 MsG0180004773.01.T01:intron
GTTACAGAGAGGGCCAACCC+CGG 0.680256 1:-82578643 MsG0180004773.01.T01:CDS
ATGAATTCTAATATTCCATG+AGG 0.680902 1:+82574101 None:intergenic
ATTTATGTAGAAATGGACCA+AGG 0.683713 1:-82579843 MsG0180004773.01.T01:intron
TGAATTACGCATAACGACCA+AGG 0.689788 1:-82579120 MsG0180004773.01.T01:CDS
TATTAAGGTGTCAATGTGTG+AGG 0.691811 1:+82572795 None:intergenic
TGTGTTGGACCACTACTATG+TGG 0.695704 1:-82574165 MsG0180004773.01.T01:intron
AAATGGTGTTCCACCAACAG+GGG 0.698079 1:-82581039 MsG0180004773.01.T01:CDS
TGTTGACATAACAAGATACA+CGG 0.700844 1:-82580870 MsG0180004773.01.T01:CDS
CTTGTGCAAACGTTACAGAG+AGG 0.710038 1:-82578654 MsG0180004773.01.T01:CDS
CGACAGCGTTTGCATCGAGG+CGG 0.711723 1:-82576613 MsG0180004773.01.T01:intron
TAGTTGGAACATGAACTACC+TGG 0.721640 1:+82572865 None:intergenic
TATGTAGAAATGGACCAAGG+AGG 0.727348 1:-82579840 MsG0180004773.01.T01:intron
CGGAATAGCAGACAACGTCG+AGG 0.727407 1:-82573140 MsG0180004773.01.T01:three_prime_UTR
AGTGAGTACTTACATCAGGG+AGG 0.750946 1:+82573380 None:intergenic
AAGAGTGAAAGTGACACACG+AGG 0.759053 1:+82573865 None:intergenic
ATGGAGATACAGTTTCACCG+GGG 0.808137 1:+82578626 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATTATATTTATGTAGAAA+TGG - Chr1:82576187-82576206 MsG0180004773.01.T01:intron 10.0%
!! ATGTTTAAATAAAATGAAAT+TGG + Chr1:82577114-82577133 None:intergenic 10.0%
!! GTATTTGATTATAAATTTAT+AGG - Chr1:82582738-82582757 MsG0180004773.01.T01:intron 10.0%
!! TAAACGAAAATTATTTAAAT+GGG + Chr1:82573502-82573521 None:intergenic 10.0%
!! TAAATAATACTTATTAAAAG+GGG + Chr1:82576793-82576812 None:intergenic 10.0%
!! TTTCATATAAAAAAAAACAA+GGG - Chr1:82572787-82572806 MsG0180004773.01.T01:three_prime_UTR 10.0%
!!! ATTTCAATAATTTATTTTTC+TGG - Chr1:82572484-82572503 MsG0180004773.01.T01:three_prime_UTR 10.0%
!!! TTTTCATATAAAAAAAAACA+AGG - Chr1:82572786-82572805 MsG0180004773.01.T01:three_prime_UTR 10.0%
!! AAACAAATGACATATTATAA+GGG - Chr1:82580386-82580405 MsG0180004773.01.T01:intron 15.0%
!! AAACTAAGAATAAAAGAAAA+TGG + Chr1:82576382-82576401 None:intergenic 15.0%
!! AATTAATTAGTTATTGAATC+AGG + Chr1:82581610-82581629 None:intergenic 15.0%
!! AGTTATGAACAAAAAATATT+AGG - Chr1:82574575-82574594 MsG0180004773.01.T01:intron 15.0%
!! ATATTTATATTCCACAAATT+TGG + Chr1:82577255-82577274 None:intergenic 15.0%
!! ATTAGGATTTGTATATAATT+AGG - Chr1:82580247-82580266 MsG0180004773.01.T01:intron 15.0%
!! ATTTGTATATAATTAGGATT+AGG - Chr1:82580253-82580272 MsG0180004773.01.T01:intron 15.0%
!! GTAAACGAAAATTATTTAAA+TGG + Chr1:82573503-82573522 None:intergenic 15.0%
!! TATGAAATCAAACATAATTT+GGG - Chr1:82582813-82582832 MsG0180004773.01.T01:intron 15.0%
!! TCTACATAAATATAATTTCA+TGG + Chr1:82576185-82576204 None:intergenic 15.0%
!! TGAAATAAAAAACGTTAAAT+TGG + Chr1:82572470-82572489 None:intergenic 15.0%
!! TTATCTTATAAACTTGAAAT+TGG - Chr1:82582716-82582735 MsG0180004773.01.T01:intron 15.0%
!!! AAATAAACAACTTTTAAGTT+AGG + Chr1:82575603-82575622 None:intergenic 15.0%
!!! AACATTTTTTTTATTTGTTC+AGG - Chr1:82577129-82577148 MsG0180004773.01.T01:intron 15.0%
!!! ACATTTTTTTTATTTGTTCA+GGG - Chr1:82577130-82577149 MsG0180004773.01.T01:intron 15.0%
!!! ACTTTTCTTATTTAGAATAA+TGG + Chr1:82573996-82574015 None:intergenic 15.0%
!!! ATATGAAAATTTTAGTATGT+TGG + Chr1:82572775-82572794 None:intergenic 15.0%
!!! CAAATATAGAAATATTGTTT+TGG + Chr1:82575540-82575559 None:intergenic 15.0%
!!! CATTTTGAAACAATTTTTTT+TGG + Chr1:82575662-82575681 None:intergenic 15.0%
!!! CTTTTCTTATTTAGAATAAT+GGG + Chr1:82573995-82574014 None:intergenic 15.0%
!!! GACTTTTCAAAAAATATTAT+GGG - Chr1:82581647-82581666 MsG0180004773.01.T01:intron 15.0%
!!! TACTAATGTCATTTTTTTAT+AGG - Chr1:82579127-82579146 MsG0180004773.01.T01:CDS 15.0%
!!! TAGTTTTAAAAGTAATACTT+TGG + Chr1:82575765-82575784 None:intergenic 15.0%
!!! TATTTGATTTTGTTTCTTTT+AGG - Chr1:82577324-82577343 MsG0180004773.01.T01:intron 15.0%
!!! TGACTTTTCAAAAAATATTA+TGG - Chr1:82581646-82581665 MsG0180004773.01.T01:intron 15.0%
!! AATGATTAAAAGAAAGAGAA+TGG + Chr1:82575822-82575841 None:intergenic 20.0%
!! AGAAAAAGTTATTATTGCAT+TGG + Chr1:82575702-82575721 None:intergenic 20.0%
!! AGAGAAAATGAAGTAAATAT+AGG - Chr1:82576837-82576856 MsG0180004773.01.T01:intron 20.0%
!! ATACAAACGCATAAAATATA+TGG + Chr1:82582389-82582408 None:intergenic 20.0%
!! ATACCATATCTAAATATCTT+CGG + Chr1:82574756-82574775 None:intergenic 20.0%
!! ATAGTTAGAATGTATATGAA+AGG - Chr1:82575383-82575402 MsG0180004773.01.T01:intron 20.0%
!! ATATATAAGGATGTAGAAAT+TGG - Chr1:82580344-82580363 MsG0180004773.01.T01:intron 20.0%
!! ATGAAATCAAACATAATTTG+GGG - Chr1:82582814-82582833 MsG0180004773.01.T01:intron 20.0%
!! ATGAAGTAAATATAGGTATT+AGG - Chr1:82576844-82576863 MsG0180004773.01.T01:intron 20.0%
!! GAAACAAATGACATATTATA+AGG - Chr1:82580385-82580404 MsG0180004773.01.T01:intron 20.0%
!! GGATTAAAAAAAAGTTTACA+GGG - Chr1:82581578-82581597 MsG0180004773.01.T01:intron 20.0%
!! GTATGAAATCAAACATAATT+TGG - Chr1:82582812-82582831 MsG0180004773.01.T01:intron 20.0%
!! TACATCCTTATATATAGTTT+CGG + Chr1:82580339-82580358 None:intergenic 20.0%
!! TATCAGCTATAACAATAAAT+CGG + Chr1:82576263-82576282 None:intergenic 20.0%
!! TCAAGAAATATAGAATAACA+AGG - Chr1:82577632-82577651 MsG0180004773.01.T01:intron 20.0%
!! TCATAAGAAGATACATTATT+AGG - Chr1:82573411-82573430 MsG0180004773.01.T01:CDS 20.0%
!! TGATTCATTAATTGGAAAAT+GGG - Chr1:82574905-82574924 MsG0180004773.01.T01:intron 20.0%
!! TGGATTAAAAAAAAGTTTAC+AGG - Chr1:82581577-82581596 MsG0180004773.01.T01:intron 20.0%
!! TTAAACATCTTCATTAATCT+TGG + Chr1:82580497-82580516 None:intergenic 20.0%
!! TTCTTTGTATTCTACATATT+TGG - Chr1:82578655-82578674 MsG0180004773.01.T01:CDS 20.0%
!! TTGACCTTAAAATTATTATC+AGG + Chr1:82578952-82578971 None:intergenic 20.0%
!! TTGATTCATTAATTGGAAAA+TGG - Chr1:82574904-82574923 MsG0180004773.01.T01:intron 20.0%
!!! AACAAATTATTGACTGAAAT+TGG - Chr1:82573833-82573852 MsG0180004773.01.T01:CDS 20.0%
!!! AAGAAGATTGTAAATTTTTC+CGG + Chr1:82572813-82572832 None:intergenic 20.0%
!!! AAGCAAAAAAACACTTTTTT+AGG - Chr1:82573208-82573227 MsG0180004773.01.T01:three_prime_UTR 20.0%
!!! ACAAATTATTGACTGAAATT+GGG - Chr1:82573834-82573853 MsG0180004773.01.T01:CDS 20.0%
!!! ACATTTTCTTTTGAAGAAAA+AGG - Chr1:82581695-82581714 MsG0180004773.01.T01:intron 20.0%
!!! ACTTCCTGATAATAATTTTA+AGG - Chr1:82578945-82578964 MsG0180004773.01.T01:intron 20.0%
!!! AGGTATTTTTTTTTTCTTGT+TGG - Chr1:82572609-82572628 MsG0180004773.01.T01:three_prime_UTR 20.0%
!!! ATAATTTTGAAAAGGAAAGT+AGG + Chr1:82583699-82583718 None:intergenic 20.0%
!!! ATGCTAACTTATTGATTAAA+AGG + Chr1:82581732-82581751 None:intergenic 20.0%
!!! CATTTTTTTTATTTGTTCAG+GGG - Chr1:82577131-82577150 MsG0180004773.01.T01:intron 20.0%
!!! GTATTTATTTTCTAAACTTC+AGG + Chr1:82583607-82583626 None:intergenic 20.0%
!!! TCACACAAATAATTTTGAAA+AGG + Chr1:82583707-82583726 None:intergenic 20.0%
!!! TCTTCTTAATTAATTTGTCA+CGG - Chr1:82583445-82583464 MsG0180004773.01.T01:intron 20.0%
!!! TGATTTTTTCAATGATTATG+AGG + Chr1:82580457-82580476 None:intergenic 20.0%
!!! TTCATTTTCTCTACTTATTA+AGG + Chr1:82583260-82583279 None:intergenic 20.0%
!!! TTTCAGTCAATAATTTGTTT+AGG + Chr1:82573832-82573851 None:intergenic 20.0%
!!! TTTTTGCTTATAATAGTAAC+CGG + Chr1:82573197-82573216 None:intergenic 20.0%
!!! TTTTTTCTGTCTTTTTGATT+GGG + Chr1:82579797-82579816 None:intergenic 20.0%
! AAAAAGACAGAAAAAACTGA+AGG - Chr1:82579801-82579820 MsG0180004773.01.T01:CDS 25.0%
! AAAATTCAAGGACTGTATAT+TGG - Chr1:82581794-82581813 MsG0180004773.01.T01:intron 25.0%
! AAACAGAATCTATATCCTAT+GGG + Chr1:82572985-82573004 None:intergenic 25.0%
! AAACTTTCAAATAACGTTTC+TGG - Chr1:82578336-82578355 MsG0180004773.01.T01:intron 25.0%
! AAATATTTACACCCAAACTT+TGG - Chr1:82577269-82577288 MsG0180004773.01.T01:intron 25.0%
! AAGATAGTCAATCAATGATA+TGG - Chr1:82573915-82573934 MsG0180004773.01.T01:CDS 25.0%
! AAGTGCCATAGTTAATAATT+TGG + Chr1:82581840-82581859 None:intergenic 25.0%
! AATTGGACTACATTCATTAA+TGG + Chr1:82578871-82578890 None:intergenic 25.0%
! AATTTCAACAATATGTTGTG+TGG - Chr1:82574018-82574037 MsG0180004773.01.T01:intron 25.0%
! ACAACCATTAAAAATTACCT+TGG + Chr1:82576937-82576956 None:intergenic 25.0%
! ACATCCTTATATATAGTTTC+GGG + Chr1:82580338-82580357 None:intergenic 25.0%
! ACATGATCATTCATTGTATA+AGG + Chr1:82572915-82572934 None:intergenic 25.0%
! AGTAATGCTTTACTTCATTA+AGG + Chr1:82583034-82583053 None:intergenic 25.0%
! ATAAACCCTAAATATTTCCA+TGG - Chr1:82572338-82572357 MsG0180004773.01.T02:three_prime_UTR 25.0%
! ATATAAAAAAAAACAAGGGC+CGG - Chr1:82572791-82572810 MsG0180004773.01.T01:three_prime_UTR 25.0%
! ATGAATTCTAATATTCCATG+AGG + Chr1:82581939-82581958 None:intergenic 25.0%
! ATGAATTCTATTCTATGTGT+AGG - Chr1:82583380-82583399 MsG0180004773.01.T01:intron 25.0%
! ATGACACTTATAATTACATG+TGG - Chr1:82576963-82576982 MsG0180004773.01.T01:intron 25.0%
! ATGAGAAAAACTAAGCAAAA+AGG + Chr1:82577026-82577045 None:intergenic 25.0%
! ATTATTAGGAAGAAGAAAGA+AGG - Chr1:82573425-82573444 MsG0180004773.01.T01:CDS 25.0%
! ATTCTACATTTCACTATTTC+AGG - Chr1:82578048-82578067 MsG0180004773.01.T01:intron 25.0%
! ATTGACTATCTTAAAAGCTT+AGG + Chr1:82573907-82573926 None:intergenic 25.0%
! ATTTAGTCCATTTATAGGTT+TGG + Chr1:82581440-82581459 None:intergenic 25.0%
! ATTTATAACGATGCAGATAT+TGG - Chr1:82574453-82574472 MsG0180004773.01.T01:intron 25.0%
! ATTTCAACAATATGTTGTGT+GGG - Chr1:82574019-82574038 MsG0180004773.01.T01:intron 25.0%
! CATATACATTCTAACTATAC+AGG + Chr1:82575381-82575400 None:intergenic 25.0%
! CCAATTATTGTAAAAGCTTA+AGG + Chr1:82574125-82574144 None:intergenic 25.0%
! GATTGTAACTTAAAGATAGT+TGG + Chr1:82583191-82583210 None:intergenic 25.0%
! GATTTATTGTTATAGCTGAT+AGG - Chr1:82576262-82576281 MsG0180004773.01.T01:intron 25.0%
! GGAAAAATTTACAATCTTCT+TGG - Chr1:82572812-82572831 MsG0180004773.01.T01:three_prime_UTR 25.0%
! GTAATGCTTTACTTCATTAA+GGG + Chr1:82583033-82583052 None:intergenic 25.0%
! GTACCTAGAAAAAAAATTCA+AGG - Chr1:82581782-82581801 MsG0180004773.01.T01:intron 25.0%
! GTATGCTTTGATTCATTAAT+TGG - Chr1:82574897-82574916 MsG0180004773.01.T01:intron 25.0%
! TAAAATAAGTCAATCCAAAC+TGG - Chr1:82573387-82573406 MsG0180004773.01.T01:exon 25.0%
! TAAATAATGTGCTTTAGCAT+TGG + Chr1:82579701-82579720 None:intergenic 25.0%
! TACAGAATCAAACAAAAGAT+AGG + Chr1:82579869-82579888 None:intergenic 25.0%
! TCTCACATTTCAAACATAAA+TGG - Chr1:82578528-82578547 MsG0180004773.01.T01:intron 25.0%
! TCTTAAAAGCTTAGGTTATT+AGG + Chr1:82573899-82573918 None:intergenic 25.0%
! TGAAAAATAGAACTTGCAAA+AGG - Chr1:82580411-82580430 MsG0180004773.01.T01:intron 25.0%
! TGAATTCTATTCTATGTGTA+GGG - Chr1:82583381-82583400 MsG0180004773.01.T01:intron 25.0%
! TGTAAAATGAGGAAAAAAGT+TGG - Chr1:82581557-82581576 MsG0180004773.01.T01:intron 25.0%
! TGTTTGAACAAAATTAGAGT+CGG - Chr1:82572675-82572694 MsG0180004773.01.T01:three_prime_UTR 25.0%
! TTAACTACTGTATTATATGC+AGG - Chr1:82576869-82576888 MsG0180004773.01.T01:intron 25.0%
! TTACCTTGTAACAGTATAAT+TGG - Chr1:82582486-82582505 MsG0180004773.01.T01:intron 25.0%
! TTAGTTTCATTGGATCAATT+GGG - Chr1:82577225-82577244 MsG0180004773.01.T01:intron 25.0%
! TTATGAAAATTTGACTGTAG+AGG - Chr1:82577671-82577690 MsG0180004773.01.T01:intron 25.0%
! TTATTCAATGAACCTAAAAG+TGG - Chr1:82573280-82573299 MsG0180004773.01.T01:three_prime_UTR 25.0%
! TTGAAAATTGTGTTTCACAA+GGG + Chr1:82577744-82577763 None:intergenic 25.0%
! TTGTCCAAATTGATATTGAT+AGG - Chr1:82582526-82582545 MsG0180004773.01.T01:intron 25.0%
! TTGTGAATCAAATCATGAAT+AGG + Chr1:82574935-82574954 None:intergenic 25.0%
! TTTATAACGATGCAGATATT+GGG - Chr1:82574454-82574473 MsG0180004773.01.T01:intron 25.0%
!! AAAAATACCTTTTTGTCTGA+AGG + Chr1:82572599-82572618 None:intergenic 25.0%
!! AAAGGCATAATTAGATAGTA+TGG + Chr1:82577008-82577027 None:intergenic 25.0%
!! AATAAAACCTTTTCAGCATT+AGG - Chr1:82576615-82576634 MsG0180004773.01.T01:intron 25.0%
!! AGGGTATCATATAATGTTAT+TGG + Chr1:82578025-82578044 None:intergenic 25.0%
!! AGTTTCAGCTTTTAGTATAA+TGG - Chr1:82578612-82578631 MsG0180004773.01.T01:CDS 25.0%
!! CCTTAAGCTTTTACAATAAT+TGG - Chr1:82574122-82574141 MsG0180004773.01.T01:intron 25.0%
!! GCTACAAAAAACTGAATTTT+AGG - Chr1:82575310-82575329 MsG0180004773.01.T01:intron 25.0%
!! GTTTCAGCTTTTAGTATAAT+GGG - Chr1:82578613-82578632 MsG0180004773.01.T01:CDS 25.0%
!! TAAATTTGTTTGGCTATTGA+TGG - Chr1:82583070-82583089 MsG0180004773.01.T01:intron 25.0%
!! TAGGTTATTGTTAGTTTCAT+TGG - Chr1:82577215-82577234 MsG0180004773.01.T01:intron 25.0%
!! TCTCACAGTTTAAATTTGTT+TGG - Chr1:82583060-82583079 MsG0180004773.01.T01:intron 25.0%
!! TTAGAATAATGGGATCAATA+AGG + Chr1:82573985-82574004 None:intergenic 25.0%
!! TTTTTATATTCAGTGCTACA+TGG - Chr1:82580106-82580125 MsG0180004773.01.T01:intron 25.0%
!!! AAAAACCAAAAACCACTTTT+AGG + Chr1:82573295-82573314 None:intergenic 25.0%
!!! AAAACACTTTTTTAGGTTCA+TGG - Chr1:82573215-82573234 MsG0180004773.01.T01:three_prime_UTR 25.0%
!!! AAACCTATAAATGGACTAAA+TGG - Chr1:82581439-82581458 MsG0180004773.01.T01:intron 25.0%
!!! AACTTTTTTCCTCATTTTAC+AGG + Chr1:82581558-82581577 None:intergenic 25.0%
!!! AGTAGAAAATGATTGGTTTT+TGG + Chr1:82581980-82581999 None:intergenic 25.0%
!!! AGTCCTTGAATTTTTTTTCT+AGG + Chr1:82581788-82581807 None:intergenic 25.0%
!!! ATGTAGAAATTGGTTTGTTA+AGG - Chr1:82580354-82580373 MsG0180004773.01.T01:intron 25.0%
!!! GTAGAAAATGATTGGTTTTT+GGG + Chr1:82581979-82581998 None:intergenic 25.0%
!!! GTTTTTTCTGTCTTTTTGAT+TGG + Chr1:82579798-82579817 None:intergenic 25.0%
!!! TTCTGTGTTATTTTAAGAGT+TGG - Chr1:82576081-82576100 MsG0180004773.01.T01:intron 25.0%
!!! TTTGAATTCACTTTTAGTAG+CGG - Chr1:82582434-82582453 MsG0180004773.01.T01:intron 25.0%
!!! TTTTAGGTTCATTGAATAAC+AGG + Chr1:82573279-82573298 None:intergenic 25.0%
!!! TTTTTTTTCTTGTTGGTTGT+TGG - Chr1:82572616-82572635 MsG0180004773.01.T01:three_prime_UTR 25.0%
AAACCCCTAAATGAACTAAA+TGG + Chr1:82580728-82580747 None:intergenic 30.0%
AAATATTTGGCAAATCCTGT+AGG - Chr1:82575204-82575223 MsG0180004773.01.T01:intron 30.0%
AACAAAATTAGAGTCGGAAA+CGG - Chr1:82572681-82572700 MsG0180004773.01.T01:three_prime_UTR 30.0%
AACAGAATCTATATCCTATG+GGG + Chr1:82572984-82573003 None:intergenic 30.0%
AAGTATAACAAGGTAAATGC+AGG - Chr1:82575035-82575054 MsG0180004773.01.T01:intron 30.0%
AATGCATAATGTGTTTAGGT+TGG + Chr1:82583558-82583577 None:intergenic 30.0%
ACAACGAAGTAGAAAATGAT+TGG + Chr1:82581987-82582006 None:intergenic 30.0%
ACAATGTAACCTGTAAAATG+AGG - Chr1:82581546-82581565 MsG0180004773.01.T01:intron 30.0%
ACACCGAAGATATTTAGATA+TGG - Chr1:82574750-82574769 MsG0180004773.01.T01:intron 30.0%
ACATCAGAAATGCATTAAAG+AGG + Chr1:82577955-82577974 None:intergenic 30.0%
ACATTTCACTATTTCAGGAT+TGG - Chr1:82578053-82578072 MsG0180004773.01.T01:intron 30.0%
ACCTAAACACATTATGCATT+TGG - Chr1:82583558-82583577 MsG0180004773.01.T01:intron 30.0%
ACGACAACAATATGAAATGT+TGG - Chr1:82583330-82583349 MsG0180004773.01.T01:intron 30.0%
ACTTATAATTACATGTGGAG+AGG - Chr1:82576968-82576987 MsG0180004773.01.T01:CDS 30.0%
AGAATCAAACAAAAGATAGG+AGG + Chr1:82579866-82579885 None:intergenic 30.0%
AGATAACAGCAAATGAAGTT+CGG - Chr1:82580550-82580569 MsG0180004773.01.T01:intron 30.0%
AGGTATTTCGTCTTCAAAAA+AGG + Chr1:82578923-82578942 None:intergenic 30.0%
ATAAAATTGAATCAGCCTCA+TGG - Chr1:82581921-82581940 MsG0180004773.01.T01:intron 30.0%
ATAGTGAAATGTAGAATGCA+AGG + Chr1:82578045-82578064 None:intergenic 30.0%
ATATATAGTTTCGGGCTTAA+AGG + Chr1:82580330-82580349 None:intergenic 30.0%
ATCGTGCAAGAAACATAAAA+GGG + Chr1:82581035-82581054 None:intergenic 30.0%
ATGCTCCAAGATAACATAAA+GGG + Chr1:82574296-82574315 None:intergenic 30.0%
ATGGATGTGAAAAATATCCT+TGG - Chr1:82572357-82572376 MsG0180004773.01.T02:three_prime_UTR 30.0%
ATGTTGGAAACTTTCAGTTA+TGG + Chr1:82581007-82581026 None:intergenic 30.0%
ATTAGGTGAGAGCAATTTAA+TGG + Chr1:82573882-82573901 None:intergenic 30.0%
ATTTATGTAGAAATGGACCA+AGG - Chr1:82576194-82576213 MsG0180004773.01.T01:intron 30.0%
CAAACAGAATCTATATCCTA+TGG + Chr1:82572986-82573005 None:intergenic 30.0%
CAAGCTAACATTGAAATCTT+TGG - Chr1:82583149-82583168 MsG0180004773.01.T01:intron 30.0%
CAAGTAGTGTCTTAATAGTT+CGG - Chr1:82578397-82578416 MsG0180004773.01.T01:intron 30.0%
CAATGATATGGATATGGTAT+TGG - Chr1:82573927-82573946 MsG0180004773.01.T01:CDS 30.0%
CACATCCATGGAAATATTTA+GGG + Chr1:82572346-82572365 None:intergenic 30.0%
CACTCTAAATCTTTCTTCTT+CGG + Chr1:82573525-82573544 None:intergenic 30.0%
CAGCAGATTCAAATTGTAAA+TGG - Chr1:82574981-82575000 MsG0180004773.01.T01:intron 30.0%
CATAGGATATAGATTCTGTT+TGG - Chr1:82572984-82573003 MsG0180004773.01.T01:three_prime_UTR 30.0%
CCTAAACACATTATGCATTT+GGG - Chr1:82583559-82583578 MsG0180004773.01.T01:intron 30.0%
CGCATGGTAAGTTAAAAATA+AGG - Chr1:82577508-82577527 MsG0180004773.01.T01:intron 30.0%
CGTCACCAAATTATTAACTA+TGG - Chr1:82581832-82581851 MsG0180004773.01.T01:CDS 30.0%
CTTAATTTAATCACAACCCT+TGG + Chr1:82580779-82580798 None:intergenic 30.0%
CTTCAAATCTTCAATTGTGT+TGG - Chr1:82581857-82581876 MsG0180004773.01.T01:intron 30.0%
CTTCCTTAACTGTATCTTTA+GGG + Chr1:82575451-82575470 None:intergenic 30.0%
CTTGAAAATTGTGTTTCACA+AGG + Chr1:82577745-82577764 None:intergenic 30.0%
GAAAATGGTTGAAAAAGCAA+TGG + Chr1:82581058-82581077 None:intergenic 30.0%
GAAACATCTCTTAGTATTTG+AGG + Chr1:82577066-82577085 None:intergenic 30.0%
GATATACAACATGTCAAGTT+TGG - Chr1:82572864-82572883 MsG0180004773.01.T01:three_prime_UTR 30.0%
GCTGAAACAAATTAAAGACA+CGG + Chr1:82579195-82579214 None:intergenic 30.0%
GGAACCTATCAATATCAATT+TGG + Chr1:82582533-82582552 None:intergenic 30.0%
GGGTAAGTGCATTTATAAAA+CGG + Chr1:82576043-82576062 None:intergenic 30.0%
GTATATTGGAAATCCTGAAA+AGG - Chr1:82581808-82581827 MsG0180004773.01.T01:CDS 30.0%
GTCAATCAATGATATGGATA+TGG - Chr1:82573921-82573940 MsG0180004773.01.T01:CDS 30.0%
GTCTTAAACAAAGTTCAAGA+GGG - Chr1:82582614-82582633 MsG0180004773.01.T01:intron 30.0%
TAAGCCCGAAACTATATATA+AGG - Chr1:82580331-82580350 MsG0180004773.01.T01:intron 30.0%
TACCACTCTAAATCATTCAT+TGG - Chr1:82582339-82582358 MsG0180004773.01.T01:intron 30.0%
TAGATGAAATTTCTAACGCT+TGG + Chr1:82579538-82579557 None:intergenic 30.0%
TAGTGAAATGTAGAATGCAA+GGG + Chr1:82578044-82578063 None:intergenic 30.0%
TAGTTTCATTGGATCAATTG+GGG - Chr1:82577226-82577245 MsG0180004773.01.T01:intron 30.0%
TATAAGCCTGAAAAGATGAA+GGG + Chr1:82582066-82582085 None:intergenic 30.0%
TATACAAATCCTAATGAGCT+TGG + Chr1:82580242-82580261 None:intergenic 30.0%
TCACATCCATGGAAATATTT+AGG + Chr1:82572347-82572366 None:intergenic 30.0%
TCTCTCACTTAAACTTATCA+TGG + Chr1:82580954-82580973 None:intergenic 30.0%
TGGTTAATGAGTTTCAGTTA+AGG + Chr1:82578252-82578271 None:intergenic 30.0%
TGTTGACATAACAAGATACA+CGG - Chr1:82575167-82575186 MsG0180004773.01.T01:intron 30.0%
TTAAGATGTATACACCGAAA+AGG + Chr1:82575409-82575428 None:intergenic 30.0%
TTATAACGATGCAGATATTG+GGG - Chr1:82574455-82574474 MsG0180004773.01.T01:intron 30.0%
TTATAAGCCTGAAAAGATGA+AGG + Chr1:82582067-82582086 None:intergenic 30.0%
TTCAATAGATTCTCAGACAT+TGG + Chr1:82573761-82573780 None:intergenic 30.0%
TTCAGGTCTTACATTAATCT+TGG + Chr1:82583590-82583609 None:intergenic 30.0%
TTCATTGAATAACAGGTATC+TGG + Chr1:82573272-82573291 None:intergenic 30.0%
TTCCATTCAACAAAAACCAT+AGG + Chr1:82582951-82582970 None:intergenic 30.0%
TTGAAGGATCGATATTATAG+TGG - Chr1:82576312-82576331 MsG0180004773.01.T01:intron 30.0%
TTGATTTCATACAATGCGTT+TGG + Chr1:82582804-82582823 None:intergenic 30.0%
TTTCATATTGTTGTCGTGTT+TGG + Chr1:82583327-82583346 None:intergenic 30.0%
TTTCTTTGTACTATGATTGC+AGG - Chr1:82578978-82578997 MsG0180004773.01.T01:intron 30.0%
TTTGTTTCAGCTGCAAAATA+AGG - Chr1:82579204-82579223 MsG0180004773.01.T01:intron 30.0%
! AAATTATTATCAGGAAGTGC+AGG + Chr1:82578943-82578962 None:intergenic 30.0%
! AAGATTTCAATGTTAGCTTG+AGG + Chr1:82583149-82583168 None:intergenic 30.0%
! AAGGATATTTTTCACATCCA+TGG + Chr1:82572358-82572377 None:intergenic 30.0%
! ACGACCAAGGTAATTTTTAA+TGG - Chr1:82576930-82576949 MsG0180004773.01.T01:intron 30.0%
! AGAAGATTGGTAATAGTGTT+GGG - Chr1:82574636-82574655 MsG0180004773.01.T01:intron 30.0%
! ATGAACCTAAAAGTGGTTTT+TGG - Chr1:82573287-82573306 MsG0180004773.01.T01:three_prime_UTR 30.0%
! ATGCTCCATTTAGTTCATTT+AGG - Chr1:82580720-82580739 MsG0180004773.01.T01:intron 30.0%
! ATGTATATGAAAGGCCTTTT+CGG - Chr1:82575392-82575411 MsG0180004773.01.T01:intron 30.0%
! ATTTAGTTCATTTAGGGGTT+TGG - Chr1:82580727-82580746 MsG0180004773.01.T01:intron 30.0%
! ATTTGTAGTGCTCTTTTGAT+AGG - Chr1:82579994-82580013 MsG0180004773.01.T01:intron 30.0%
! CATTCTTTTTCTCAAATCAC+GGG - Chr1:82579382-82579401 MsG0180004773.01.T01:intron 30.0%
! CCATTCTTTTTCTCAAATCA+CGG - Chr1:82579381-82579400 MsG0180004773.01.T01:intron 30.0%
! GATTCACAATTTGATGATCA+CGG - Chr1:82574946-82574965 MsG0180004773.01.T01:intron 30.0%
! GTAGTGTGCAAAGTATTAAT+TGG + Chr1:82575740-82575759 None:intergenic 30.0%
! GTATTTCTATTAGAAGCCTA+AGG + Chr1:82578797-82578816 None:intergenic 30.0%
! GTTAGTTTCATTGGATCAAT+TGG - Chr1:82577224-82577243 MsG0180004773.01.T01:intron 30.0%
! TCTGATTTTCTATCTTGACT+GGG - Chr1:82575092-82575111 MsG0180004773.01.T01:intron 30.0%
! TGCATTTACCTTGTTATACT+TGG + Chr1:82575036-82575055 None:intergenic 30.0%
! TGCTCCATTTAGTTCATTTA+GGG - Chr1:82580721-82580740 MsG0180004773.01.T01:intron 30.0%
! TGGACTAGAATTAATGTCTT+TGG + Chr1:82583538-82583557 None:intergenic 30.0%
! TGTGCAAAGTATTAATTGGA+GGG + Chr1:82575736-82575755 None:intergenic 30.0%
! TGTTGTTTAAGCAATCTCAA+AGG + Chr1:82575272-82575291 None:intergenic 30.0%
! TTACGAGCAGAATTTTTGAA+AGG + Chr1:82574210-82574229 None:intergenic 30.0%
! TTCAGCAATTCTTTTTGCTT+CGG + Chr1:82576901-82576920 None:intergenic 30.0%
! TTCCTATGGTTTTTGTTGAA+TGG - Chr1:82582946-82582965 MsG0180004773.01.T01:intron 30.0%
! TTCGGTGTATACATCTTAAA+GGG - Chr1:82575410-82575429 MsG0180004773.01.T01:intron 30.0%
! TTCTGATTTTCTATCTTGAC+TGG - Chr1:82575091-82575110 MsG0180004773.01.T01:intron 30.0%
! TTCTTTTGCCAAGTATAACA+AGG - Chr1:82575025-82575044 MsG0180004773.01.T01:intron 30.0%
! TTTCGGTGTATACATCTTAA+AGG - Chr1:82575409-82575428 MsG0180004773.01.T01:intron 30.0%
! TTTTATAACCAATGCCCTAA+GGG - Chr1:82575561-82575580 MsG0180004773.01.T01:intron 30.0%
! TTTTTATAACCAATGCCCTA+AGG - Chr1:82575560-82575579 MsG0180004773.01.T01:intron 30.0%
!! AAACGACACTCATTTTGAAA+CGG - Chr1:82575871-82575890 MsG0180004773.01.T01:intron 30.0%
!! ATAGACCTTGCATTTTAATC+TGG + Chr1:82581760-82581779 None:intergenic 30.0%
!! ATTTTTCACCAAAGCACTTA+GGG - Chr1:82572439-82572458 MsG0180004773.01.T01:three_prime_UTR 30.0%
!! CACAATTTTCAAGCATTTGT+TGG - Chr1:82577752-82577771 MsG0180004773.01.T01:intron 30.0%
!! GAAGAAGAAAAGTACCAAAT+AGG - Chr1:82573778-82573797 MsG0180004773.01.T01:CDS 30.0%
!! TAATGTTATTGGTACTGATC+AGG + Chr1:82578014-82578033 None:intergenic 30.0%
!! TAGACCTTGCATTTTAATCT+GGG + Chr1:82581759-82581778 None:intergenic 30.0%
!! TCTGGTGTTGTTGAATTTAT+AGG - Chr1:82572502-82572521 MsG0180004773.01.T01:three_prime_UTR 30.0%
!! TCTTAATTAATTTGTCACGG+TGG - Chr1:82583448-82583467 MsG0180004773.01.T01:intron 30.0%
!! TGTTTTTATGAGCTATTACG+AGG - Chr1:82573124-82573143 MsG0180004773.01.T01:three_prime_UTR 30.0%
!! TTTGTTCATAACTTGTTTGC+AGG + Chr1:82574568-82574587 None:intergenic 30.0%
!!! AAGTGAACTTTATTTTGTGC+TGG - Chr1:82580173-82580192 MsG0180004773.01.T01:intron 30.0%
!!! TTCAAAATGAGTGTCGTTTT+AGG + Chr1:82575870-82575889 None:intergenic 30.0%
!!! TTTGATTTTTTCCCTCATTC+AGG - Chr1:82574167-82574186 MsG0180004773.01.T01:intron 30.0%
AAAAATTGGGTAATCCTCCA+AGG + Chr1:82572377-82572396 None:intergenic 35.0%
AAATCAGAAAAATGCAGACC+AGG + Chr1:82575080-82575099 None:intergenic 35.0%
AAATGGGCAGCTGAAAATAT+AGG - Chr1:82574802-82574821 MsG0180004773.01.T01:intron 35.0%
AAGTAATTGTGCAACTGCTT+GGG + Chr1:82573351-82573370 None:intergenic 35.0%
AATAAAGTTCACTTCCTCTG+TGG + Chr1:82580167-82580186 None:intergenic 35.0%
AATCTAGACATGATACCTAC+AGG + Chr1:82575222-82575241 None:intergenic 35.0%
AATGGGCAGCTGAAAATATA+GGG - Chr1:82574803-82574822 MsG0180004773.01.T01:intron 35.0%
AATTACACAGTTGTGCTTGA+GGG + Chr1:82576063-82576082 None:intergenic 35.0%
AATTGGGGAAACCAAATTTG+TGG - Chr1:82577241-82577260 MsG0180004773.01.T01:intron 35.0%
ACAAAATTAGAGTCGGAAAC+GGG - Chr1:82572682-82572701 MsG0180004773.01.T01:three_prime_UTR 35.0%
ACATAAAAGGGTTCAGATGT+TGG + Chr1:82581023-82581042 None:intergenic 35.0%
ACATACATGGAAGTAGTAGT+GGG + Chr1:82581494-82581513 None:intergenic 35.0%
AGAGAGCTAAACAATCAATG+TGG - Chr1:82574485-82574504 MsG0180004773.01.T01:intron 35.0%
AGAGCTAAACAATCAATGTG+GGG - Chr1:82574487-82574506 MsG0180004773.01.T01:intron 35.0%
AGGAACCTGAAAGAAGAAAA+AGG + Chr1:82583110-82583129 None:intergenic 35.0%
AGGGGAAAGAATTGGTAAAA+GGG - Chr1:82579596-82579615 MsG0180004773.01.T01:intron 35.0%
AGTTGGATTTCGATATGCAT+TGG - Chr1:82576098-82576117 MsG0180004773.01.T01:intron 35.0%
ATAAAGTTCACTTCCTCTGT+GGG + Chr1:82580166-82580185 None:intergenic 35.0%
ATAAGCCTGAAAAGATGAAG+GGG + Chr1:82582065-82582084 None:intergenic 35.0%
ATATAACGTTTCACAGGAGA+TGG - Chr1:82576689-82576708 MsG0180004773.01.T01:intron 35.0%
ATATGCATTGGACATTCTAC+GGG - Chr1:82576110-82576129 MsG0180004773.01.T01:intron 35.0%
ATCAAACTTTGCTGGAACTT+GGG - Chr1:82577916-82577935 MsG0180004773.01.T01:intron 35.0%
ATCTCCTGTGAAACGTTATA+TGG + Chr1:82576690-82576709 None:intergenic 35.0%
ATGCAATACCTTCTTTCATC+TGG - Chr1:82582037-82582056 MsG0180004773.01.T01:intron 35.0%
ATTAATTCATCATAGCGCCA+CGG + Chr1:82580529-82580548 None:intergenic 35.0%
ATTGTAGACACACTTGATCA+TGG + Chr1:82578495-82578514 None:intergenic 35.0%
ATTGTATGCATGCAATGAAC+TGG - Chr1:82579569-82579588 MsG0180004773.01.T01:CDS 35.0%
CAGCCAATTATACTGTTACA+AGG + Chr1:82582492-82582511 None:intergenic 35.0%
CATAAGCATCTGCAAATTTC+TGG + Chr1:82580292-82580311 None:intergenic 35.0%
CATGCTCCAAGATAACATAA+AGG + Chr1:82574297-82574316 None:intergenic 35.0%
CCCAAATGCATAATGTGTTT+AGG + Chr1:82583562-82583581 None:intergenic 35.0%
CCGTGATTTGAGAAAAAGAA+TGG + Chr1:82579384-82579403 None:intergenic 35.0%
CCTACTCTCAGTGAAAATAT+AGG + Chr1:82577199-82577218 None:intergenic 35.0%
CTGAAAGTAAGAAGATGGAA+TGG + Chr1:82580981-82581000 None:intergenic 35.0%
CTGCATCGTTATAAATGCAA+CGG + Chr1:82574449-82574468 None:intergenic 35.0%
CTTGCATCCAAACCTATAAA+TGG - Chr1:82581430-82581449 MsG0180004773.01.T01:intron 35.0%
CTTTATGTTATCTTGGAGCA+TGG - Chr1:82574295-82574314 MsG0180004773.01.T01:intron 35.0%
GAAGATGCAGATTTCAACAT+CGG + Chr1:82580922-82580941 None:intergenic 35.0%
GAATTCGTGATTAGAAAGAG+TGG - Chr1:82572291-82572310 MsG0180004773.01.T02:three_prime_UTR 35.0%
GACCAATGAATGATTTAGAG+TGG + Chr1:82582344-82582363 None:intergenic 35.0%
GAGAGCTAAACAATCAATGT+GGG - Chr1:82574486-82574505 MsG0180004773.01.T01:intron 35.0%
GAGGAAGAAAAACAAAACAG+AGG + Chr1:82580851-82580870 None:intergenic 35.0%
GATATGCATTGGACATTCTA+CGG - Chr1:82576109-82576128 MsG0180004773.01.T01:intron 35.0%
GATCGTGCAAGAAACATAAA+AGG + Chr1:82581036-82581055 None:intergenic 35.0%
GATGTGAAAAATATCCTTGG+AGG - Chr1:82572360-82572379 MsG0180004773.01.T02:three_prime_UTR 35.0%
GCTCCATTTAGTCCATTTAT+AGG + Chr1:82581445-82581464 None:intergenic 35.0%
GCTTCCTTAACTGTATCTTT+AGG + Chr1:82575452-82575471 None:intergenic 35.0%
GGACAGAGTTAAACATAAAC+AGG - Chr1:82581893-82581912 MsG0180004773.01.T01:intron 35.0%
GGTCTTAAACAAAGTTCAAG+AGG - Chr1:82582613-82582632 MsG0180004773.01.T01:intron 35.0%
GGTTCAAACTTAAATGAGCT+TGG + Chr1:82578723-82578742 None:intergenic 35.0%
GGTTCATAAACACACATGAA+TGG + Chr1:82573732-82573751 None:intergenic 35.0%
GTGAATTGAAGCTCTTACTA+GGG + Chr1:82579844-82579863 None:intergenic 35.0%
GTTAATGACATGTACTTCCT+CGG + Chr1:82573325-82573344 None:intergenic 35.0%
GTTACAAGGTAATATGCGAA+GGG + Chr1:82582478-82582497 None:intergenic 35.0%
GTTAGCCCTTTATGTTATCT+TGG - Chr1:82574288-82574307 MsG0180004773.01.T01:intron 35.0%
GTTAGTGAACAAACCAATGT+TGG + Chr1:82579163-82579182 None:intergenic 35.0%
GTTATAAATGCAACGGAGTT+GGG + Chr1:82574442-82574461 None:intergenic 35.0%
GTTATATGGTTCCTGCATTA+AGG + Chr1:82576676-82576695 None:intergenic 35.0%
GTTCCCTAAAGATACAGTTA+AGG - Chr1:82575445-82575464 MsG0180004773.01.T01:intron 35.0%
TAACATTGAAATCTTTGGCC+AGG - Chr1:82583154-82583173 MsG0180004773.01.T01:intron 35.0%
TAAGTAATTGTGCAACTGCT+TGG + Chr1:82573352-82573371 None:intergenic 35.0%
TAGAATTCTTCTCCTGAAGT+GGG + Chr1:82572404-82572423 None:intergenic 35.0%
TAGTCCCAGATTAAAATGCA+AGG - Chr1:82581752-82581771 MsG0180004773.01.T01:intron 35.0%
TATAACGATGCAGATATTGG+GGG - Chr1:82574456-82574475 MsG0180004773.01.T01:intron 35.0%
TATCTTCTTATGAGCCAGTT+TGG + Chr1:82573404-82573423 None:intergenic 35.0%
TATTCAAGAACCTATGCACT+TGG - Chr1:82577837-82577856 MsG0180004773.01.T01:intron 35.0%
TCAACCACTTGGTTTACTTT+GGG - Chr1:82578279-82578298 MsG0180004773.01.T01:intron 35.0%
TCGAACTGTTGAAGAATTGA+AGG - Chr1:82576296-82576315 MsG0180004773.01.T01:intron 35.0%
TGAAGTGGGAAGGAAAAATT+GGG + Chr1:82572390-82572409 None:intergenic 35.0%
TGAATTGAAGCTCTTACTAG+GGG + Chr1:82579843-82579862 None:intergenic 35.0%
TGCATTATCTGTCGATATCA+TGG + Chr1:82577470-82577489 None:intergenic 35.0%
TGCTGCTGCAAATAATATGT+AGG + Chr1:82582923-82582942 None:intergenic 35.0%
TGCTTATAATAGTAACCGGA+GGG + Chr1:82573193-82573212 None:intergenic 35.0%
TGTCAACAGAAAAGAGACAT+CGG + Chr1:82577549-82577568 None:intergenic 35.0%
TGTTACAAGGTAATATGCGA+AGG + Chr1:82582479-82582498 None:intergenic 35.0%
TTAAGACACTACTTGAGCTA+AGG + Chr1:82578392-82578411 None:intergenic 35.0%
TTACAAACGAACTTACCCAA+TGG + Chr1:82574251-82574270 None:intergenic 35.0%
TTATAAATGCAACGGAGTTG+GGG + Chr1:82574441-82574460 None:intergenic 35.0%
TTATAGGTGTATGCACTTAC+TGG - Chr1:82572518-82572537 MsG0180004773.01.T01:three_prime_UTR 35.0%
TTATCTGTCGATATCATGGA+AGG + Chr1:82577466-82577485 None:intergenic 35.0%
TTCCAGATAACACAAGTTCT+GGG - Chr1:82579467-82579486 MsG0180004773.01.T01:intron 35.0%
TTGCTTATAATAGTAACCGG+AGG + Chr1:82573194-82573213 None:intergenic 35.0%
TTGTGATTAGTGTTGCAGTA+TGG - Chr1:82572641-82572660 MsG0180004773.01.T01:three_prime_UTR 35.0%
TTGTTTGCCATTCTTTGTTG+CGG - Chr1:82581148-82581167 MsG0180004773.01.T01:intron 35.0%
TTTCTATTAGAAGCCTAAGG+AGG + Chr1:82578794-82578813 None:intergenic 35.0%
TTTGTCGTTGTAGATAGTAC+TGG - Chr1:82581086-82581105 MsG0180004773.01.T01:intron 35.0%
! AATACCTTTTTGTCTGAAGG+AGG + Chr1:82572596-82572615 None:intergenic 35.0%
! ACACTTCATGCAATCTGTTT+TGG + Chr1:82574379-82574398 None:intergenic 35.0%
! ACAGTTCTAATTTCATTCCC+AGG + Chr1:82577157-82577176 None:intergenic 35.0%
! ACCTCTAGAAAACTTGGTTA+GGG + Chr1:82573958-82573977 None:intergenic 35.0%
! AGCTCATTTAAGTTTGAACC+TGG - Chr1:82578723-82578742 MsG0180004773.01.T01:intron 35.0%
! CCTATATTTTCACTGAGAGT+AGG - Chr1:82577196-82577215 MsG0180004773.01.T01:intron 35.0%
! CGAGGAGTATGAGAAATATT+TGG - Chr1:82575191-82575210 MsG0180004773.01.T01:intron 35.0%
! CTTAATTTGATCACAACCCT+TGG - Chr1:82581388-82581407 MsG0180004773.01.T01:intron 35.0%
! GAAGATTGGTAATAGTGTTG+GGG - Chr1:82574637-82574656 MsG0180004773.01.T01:intron 35.0%
! GAGAAGATTGGTAATAGTGT+TGG - Chr1:82574635-82574654 MsG0180004773.01.T01:intron 35.0%
! GCTCCATTTAGTTCATTTAG+GGG - Chr1:82580722-82580741 MsG0180004773.01.T01:intron 35.0%
! GGTGATGATGTATCATGTTA+AGG - Chr1:82575331-82575350 MsG0180004773.01.T01:intron 35.0%
! GGTTCAGTATTTTCCCAAAA+AGG + Chr1:82580686-82580705 None:intergenic 35.0%
! GGTTTTTGTTGAATGGAACA+TGG - Chr1:82582953-82582972 MsG0180004773.01.T01:intron 35.0%
! GTGTGCAAAGTATTAATTGG+AGG + Chr1:82575737-82575756 None:intergenic 35.0%
! GTTCTTTCTCTTTTTGTGCT+GGG + Chr1:82577608-82577627 None:intergenic 35.0%
! TATTAAGGTGTCAATGTGTG+AGG + Chr1:82583245-82583264 None:intergenic 35.0%
! TGTTCTTTCTCTTTTTGTGC+TGG + Chr1:82577609-82577628 None:intergenic 35.0%
! TTCTTTCTCTTTTTGTGCTG+GGG + Chr1:82577607-82577626 None:intergenic 35.0%
!! AAGCGACACTCATTTTGAAA+CGG + Chr1:82575636-82575655 None:intergenic 35.0%
!! ATGTTTAATTTGAAACGCCG+TGG - Chr1:82580509-82580528 MsG0180004773.01.T01:intron 35.0%
!! ATTCTCAGACATTGGCTTAT+AGG + Chr1:82573753-82573772 None:intergenic 35.0%
!! CATTTTTCACCAAAGCACTT+AGG - Chr1:82572438-82572457 MsG0180004773.01.T01:three_prime_UTR 35.0%
!! CGACAAAGTACTGTTGAAAA+TGG + Chr1:82581073-82581092 None:intergenic 35.0%
!! GAAGAAAAGTACCAAATAGG+TGG - Chr1:82573781-82573800 MsG0180004773.01.T01:CDS 35.0%
!! GAATGGATTTGGTAATGAGT+GGG - Chr1:82574514-82574533 MsG0180004773.01.T01:intron 35.0%
!! TCTGTTTGGCACTTGTTTTT+GGG - Chr1:82573682-82573701 MsG0180004773.01.T01:intron 35.0%
!!! TTTGGTTTTTATAGTGACCG+AGG - Chr1:82573305-82573324 MsG0180004773.01.T01:three_prime_UTR 35.0%
AAACCCAACAATGCATGAGA+GGG + Chr1:82582989-82583008 None:intergenic 40.0%
AAACTAGCGTTACAGCTTCA+TGG - Chr1:82582149-82582168 MsG0180004773.01.T01:intron 40.0%
AAAGCCTCCTTCAGACAAAA+AGG - Chr1:82572589-82572608 MsG0180004773.01.T01:three_prime_UTR 40.0%
AAATCAACTGCTGGCATAAG+AGG + Chr1:82572554-82572573 None:intergenic 40.0%
AAATGCTAATGAGTGCCCTT+AGG + Chr1:82575579-82575598 None:intergenic 40.0%
AACAGAGACAAATCAACTGC+TGG + Chr1:82572563-82572582 None:intergenic 40.0%
AACCACTTGGTTTACTTTGG+GGG - Chr1:82578281-82578300 MsG0180004773.01.T01:intron 40.0%
AACCTACCCAGATGTTTGTA+TGG + Chr1:82582294-82582313 None:intergenic 40.0%
AACCTATGCACTTGGACAAA+TGG - Chr1:82577845-82577864 MsG0180004773.01.T01:intron 40.0%
AACTTTGGATGAACCTGTGT+CGG - Chr1:82577284-82577303 MsG0180004773.01.T01:intron 40.0%
AAGATGCAGATGCAAAGTGA+CGG + Chr1:82575999-82576018 None:intergenic 40.0%
AAGTTCGGAGCAATTGACAT+TGG - Chr1:82582262-82582281 MsG0180004773.01.T01:intron 40.0%
AATAACTTACGTACTCCCTC+CGG - Chr1:82573175-82573194 MsG0180004773.01.T01:three_prime_UTR 40.0%
AATGCTAATGAGTGCCCTTA+GGG + Chr1:82575578-82575597 None:intergenic 40.0%
ACACAGGTTCATCCAAAGTT+TGG + Chr1:82577284-82577303 None:intergenic 40.0%
ACAGCAAATGAAGTTCGGAA+TGG - Chr1:82580555-82580574 MsG0180004773.01.T01:intron 40.0%
ACCTCATTTAGTGACTACAG+TGG + Chr1:82579933-82579952 None:intergenic 40.0%
ACGTGGCAAATAAACATCCA+AGG + Chr1:82581408-82581427 None:intergenic 40.0%
AGAGACATCGGGTGAATAAT+TGG + Chr1:82577537-82577556 None:intergenic 40.0%
AGCTCATACAAGAGCCATTT+GGG + Chr1:82574069-82574088 None:intergenic 40.0%
AGCTTAATTGTCCTTGCCAA+TGG + Chr1:82574692-82574711 None:intergenic 40.0%
AGGATTACCAACACCAACAT+TGG - Chr1:82579147-82579166 MsG0180004773.01.T01:CDS 40.0%
AGGTTTGCATGCTTTCTGTT+AGG - Chr1:82579949-82579968 MsG0180004773.01.T01:intron 40.0%
AGTTTATGTCGCTCAAACAG+AGG - Chr1:82583479-82583498 MsG0180004773.01.T01:CDS 40.0%
ATATCACTAATCACCGACAC+AGG + Chr1:82577300-82577319 None:intergenic 40.0%
ATATGGTTCCTGCATTAAGG+AGG + Chr1:82576673-82576692 None:intergenic 40.0%
ATCTCCATCACACTCTCTTT+CGG + Chr1:82581177-82581196 None:intergenic 40.0%
ATGAAGCTGTAACGCTAGTT+TGG + Chr1:82582150-82582169 None:intergenic 40.0%
ATGATCTTCAGCTTCACCAT+TGG - Chr1:82574232-82574251 MsG0180004773.01.T01:intron 40.0%
ATGCGTTTGTATGTGTGCTT+CGG - Chr1:82582397-82582416 MsG0180004773.01.T01:intron 40.0%
CAAAATTAGAGTCGGAAACG+GGG - Chr1:82572683-82572702 MsG0180004773.01.T01:three_prime_UTR 40.0%
CAAATCCTAATGAGCTTGGT+TGG + Chr1:82580238-82580257 None:intergenic 40.0%
CAACCACTTGGTTTACTTTG+GGG - Chr1:82578280-82578299 MsG0180004773.01.T01:intron 40.0%
CACAGGTTCATCCAAAGTTT+GGG + Chr1:82577283-82577302 None:intergenic 40.0%
CACATACATGGAAGTAGTAG+TGG + Chr1:82581495-82581514 None:intergenic 40.0%
CAGGGGAAAGAATTGGTAAA+AGG - Chr1:82579595-82579614 MsG0180004773.01.T01:intron 40.0%
CATGTATGTGAGTTTCTTGC+AGG - Chr1:82581505-82581524 MsG0180004773.01.T01:intron 40.0%
CCTGAAAGAAGAAAAAGGAG+AGG + Chr1:82583105-82583124 None:intergenic 40.0%
CGTGGCAAATAAACATCCAA+GGG + Chr1:82581407-82581426 None:intergenic 40.0%
CGTTATAAATGCAACGGAGT+TGG + Chr1:82574443-82574462 None:intergenic 40.0%
CTAAAATGACAAGCCTCCAT+TGG - Chr1:82574673-82574692 MsG0180004773.01.T01:intron 40.0%
CTAAACAATCAATGTGGGGT+GGG - Chr1:82574491-82574510 MsG0180004773.01.T01:intron 40.0%
CTAGAATTCTTCTCCTGAAG+TGG + Chr1:82572405-82572424 None:intergenic 40.0%
CTCAACCACTTGGTTTACTT+TGG - Chr1:82578278-82578297 MsG0180004773.01.T01:intron 40.0%
CTGAAGTGGGAAGGAAAAAT+TGG + Chr1:82572391-82572410 None:intergenic 40.0%
CTGCAAGAAACTCACATACA+TGG + Chr1:82581507-82581526 None:intergenic 40.0%
CTTCAACAGTTCGAGATGAA+GGG + Chr1:82576290-82576309 None:intergenic 40.0%
CTTGAAGCCTAAACAATGTC+CGG + Chr1:82574046-82574065 None:intergenic 40.0%
CTTGCTGAATCTTCAGAAAC+AGG - Chr1:82579074-82579093 MsG0180004773.01.T01:CDS 40.0%
CTTGGAGAAATTCAGATAGC+AGG + Chr1:82579520-82579539 None:intergenic 40.0%
GAAACACGAGAAGAAGAAAG+CGG - Chr1:82581212-82581231 MsG0180004773.01.T01:intron 40.0%
GAACAAACCAATGTTGGTGT+TGG + Chr1:82579157-82579176 None:intergenic 40.0%
GAACTCGTTTCGTACAAGTT+CGG - Chr1:82582247-82582266 MsG0180004773.01.T01:intron 40.0%
GAATTACACAGTTGTGCTTG+AGG + Chr1:82576064-82576083 None:intergenic 40.0%
GATCAAACTTTGCTGGAACT+TGG - Chr1:82577915-82577934 MsG0180004773.01.T01:intron 40.0%
GCAACATCCTAATGCTGAAA+AGG + Chr1:82576625-82576644 None:intergenic 40.0%
GCATGTACTATCCACCTATT+TGG + Chr1:82573795-82573814 None:intergenic 40.0%
GGAACCATATAACGTTTCAC+AGG - Chr1:82576683-82576702 MsG0180004773.01.T01:intron 40.0%
GGTGAATTGAAGCTCTTACT+AGG + Chr1:82579845-82579864 None:intergenic 40.0%
GGTTGCTGAAAGTAAGAAGA+TGG + Chr1:82580986-82581005 None:intergenic 40.0%
GTATGTCAAAATGACGAGTC+CGG + Chr1:82581472-82581491 None:intergenic 40.0%
GTCAACAGAAAAGAGACATC+GGG + Chr1:82577548-82577567 None:intergenic 40.0%
GTGAATCTGGCACATTATTC+TGG + Chr1:82574413-82574432 None:intergenic 40.0%
GTGCTTCGGGATAAATTATG+CGG - Chr1:82582411-82582430 MsG0180004773.01.T01:intron 40.0%
GTTCCAGATAACACAAGTTC+TGG - Chr1:82579466-82579485 MsG0180004773.01.T01:intron 40.0%
GTTTCAGCTGCAAAATAAGG+AGG - Chr1:82579207-82579226 MsG0180004773.01.T01:intron 40.0%
TAAACAATCAATGTGGGGTG+GGG - Chr1:82574492-82574511 MsG0180004773.01.T01:intron 40.0%
TAAAGTTCACTTCCTCTGTG+GGG + Chr1:82580165-82580184 None:intergenic 40.0%
TAAATGGTGTTCCACCAACA+GGG - Chr1:82574997-82575016 MsG0180004773.01.T01:intron 40.0%
TAACTCTGTCCACATAGTAG+TGG + Chr1:82581884-82581903 None:intergenic 40.0%
TAAGGATATGCATCGGAATG+CGG + Chr1:82574351-82574370 None:intergenic 40.0%
TACAAATCGCAACACCATTC+CGG + Chr1:82579981-82580000 None:intergenic 40.0%
TAGCTTGAGGATAGTACCAA+AGG + Chr1:82583136-82583155 None:intergenic 40.0%
TAGTTGGAACATGAACTACC+TGG + Chr1:82583175-82583194 None:intergenic 40.0%
TATGGTTCCTGCATTAAGGA+GGG + Chr1:82576672-82576691 None:intergenic 40.0%
TATGTAGAAATGGACCAAGG+AGG - Chr1:82576197-82576216 MsG0180004773.01.T01:intron 40.0%
TATGTCAAAATGACGAGTCC+GGG + Chr1:82581471-82581490 None:intergenic 40.0%
TCAAACATAAATGGCTCGTG+TGG - Chr1:82578537-82578556 MsG0180004773.01.T01:intron 40.0%
TCAAACTTTGCTGGAACTTG+GGG - Chr1:82577917-82577936 MsG0180004773.01.T01:intron 40.0%
TCAACTCTACCTTGATGAGA+GGG - Chr1:82582592-82582611 MsG0180004773.01.T01:intron 40.0%
TCAGTTAAGGACGAAACGTT+CGG + Chr1:82578239-82578258 None:intergenic 40.0%
TCCACTGTAGTCACTAAATG+AGG - Chr1:82579929-82579948 MsG0180004773.01.T01:intron 40.0%
TCCAGATAACACAAGTTCTG+GGG - Chr1:82579468-82579487 MsG0180004773.01.T01:intron 40.0%
TCTTCAACAGTTCGAGATGA+AGG + Chr1:82576291-82576310 None:intergenic 40.0%
TGAATTACGCATAACGACCA+AGG - Chr1:82576917-82576936 MsG0180004773.01.T01:intron 40.0%
TGAGAGCAGAGAGACTAAAT+GGG - Chr1:82574786-82574805 MsG0180004773.01.T01:intron 40.0%
TGATCTTCAGCTTCACCATT+GGG - Chr1:82574233-82574252 MsG0180004773.01.T01:intron 40.0%
TGATGGAGATACAGTTTCAC+CGG + Chr1:82577416-82577435 None:intergenic 40.0%
TGCAGTGAGTACTTACATCA+GGG + Chr1:82582663-82582682 None:intergenic 40.0%
TGGAAATATTGCCTCTTCCA+TGG - Chr1:82574315-82574334 MsG0180004773.01.T01:intron 40.0%
TGGCAAACAATAAGCGAAGA+AGG + Chr1:82581138-82581157 None:intergenic 40.0%
TGGTTAAACCCTAAGTGCTT+TGG + Chr1:82572450-82572469 None:intergenic 40.0%
TGTCGGTGATTAGTGATATC+TGG - Chr1:82577301-82577320 MsG0180004773.01.T01:intron 40.0%
TTAACTTACCATGCGAAGAG+AGG + Chr1:82577503-82577522 None:intergenic 40.0%
TTAATTGTCCTTGCCAATGG+AGG + Chr1:82574689-82574708 None:intergenic 40.0%
TTATGAACACATACTGAGCC+AGG + Chr1:82578744-82578763 None:intergenic 40.0%
TTATTCTCCCTCCTTAATGC+AGG - Chr1:82576662-82576681 MsG0180004773.01.T01:intron 40.0%
TTCAACTCTACCTTGATGAG+AGG - Chr1:82582591-82582610 MsG0180004773.01.T01:intron 40.0%
TTGAAGCCTAAACAATGTCC+GGG + Chr1:82574045-82574064 None:intergenic 40.0%
TTGCAGTGAGTACTTACATC+AGG + Chr1:82582664-82582683 None:intergenic 40.0%
TTGTGCAAACGTTACAGAGA+GGG - Chr1:82577384-82577403 MsG0180004773.01.T01:intron 40.0%
TTTCCCTCATTCAGGTCATT+TGG - Chr1:82574175-82574194 MsG0180004773.01.T01:intron 40.0%
TTTGCATGCTTTCTGTTAGG+TGG - Chr1:82579952-82579971 MsG0180004773.01.T01:intron 40.0%
TTTGCTAGGGTGATTGGAAT+TGG + Chr1:82578888-82578907 None:intergenic 40.0%
! AAGGTTCATCTTTTCGTGAC+GGG - Chr1:82579233-82579252 MsG0180004773.01.T01:intron 40.0%
! ACGTGTTGATCAAACTTTGC+TGG - Chr1:82577908-82577927 MsG0180004773.01.T01:intron 40.0%
! ACTATGCACAACGCCTTTTT+GGG - Chr1:82580670-82580689 MsG0180004773.01.T01:intron 40.0%
! AGGTATTTTGCTAGGGTGAT+TGG + Chr1:82578894-82578913 None:intergenic 40.0%
! AGTATTTGAGGTTCACTAGC+AGG + Chr1:82577054-82577073 None:intergenic 40.0%
! AGTGCTGAACTATACAAAGC+CGG - Chr1:82582877-82582896 MsG0180004773.01.T01:intron 40.0%
! ATGCAATGAACTGGTTTCAG+GGG - Chr1:82579578-82579597 MsG0180004773.01.T01:CDS 40.0%
! CAATTTTTCCTTCCCACTTC+AGG - Chr1:82572389-82572408 MsG0180004773.01.T01:three_prime_UTR 40.0%
! CATGCAATGAACTGGTTTCA+GGG - Chr1:82579577-82579596 MsG0180004773.01.T01:CDS 40.0%
! CCTCTCCTTTTTCTTCTTTC+AGG - Chr1:82583102-82583121 MsG0180004773.01.T01:intron 40.0%
! CTTTGTTTGAGAGAGGATCA+GGG + Chr1:82576733-82576752 None:intergenic 40.0%
! GAAGGTTCATCTTTTCGTGA+CGG - Chr1:82579232-82579251 MsG0180004773.01.T01:intron 40.0%
! GAAGTGCAGGTATTTTGCTA+GGG + Chr1:82578901-82578920 None:intergenic 40.0%
! GACCTCTAGAAAACTTGGTT+AGG + Chr1:82573959-82573978 None:intergenic 40.0%
! GATTGCATGAAGTGTTTCCT+TGG - Chr1:82574384-82574403 MsG0180004773.01.T01:intron 40.0%
! GCAGGTCAATTTGAAACCAA+GGG - Chr1:82578996-82579015 MsG0180004773.01.T01:intron 40.0%
! GTCTTCAAAAAAGGAAGTGC+AGG + Chr1:82578914-82578933 None:intergenic 40.0%
! TAAAAGGGATCAAAAGCGCA+AGG - Chr1:82579611-82579630 MsG0180004773.01.T01:intron 40.0%
! TAGGTTGAGGAATTCATGCA+TGG - Chr1:82573705-82573724 MsG0180004773.01.T01:intron 40.0%
! TCCCTAACCAAGTTTTCTAG+AGG - Chr1:82573954-82573973 MsG0180004773.01.T01:CDS 40.0%
! TCTGCACAAACAGCTTTTGT+TGG + Chr1:82579024-82579043 None:intergenic 40.0%
! TCTTTCTCTTTTTGTGCTGG+GGG + Chr1:82577606-82577625 None:intergenic 40.0%
! TGAGTTGGATGTTGCTTCAA+AGG - Chr1:82577360-82577379 MsG0180004773.01.T01:intron 40.0%
! TGCAAGAATCTTGTTTGCTG+CGG - Chr1:82574540-82574559 MsG0180004773.01.T01:intron 40.0%
! TGCAGGTCAATTTGAAACCA+AGG - Chr1:82578995-82579014 MsG0180004773.01.T01:intron 40.0%
! TGTTTAAGACCCTCTCATCA+AGG + Chr1:82582604-82582623 None:intergenic 40.0%
! TTTTAACCCTCCTGTTCCTA+GGG - Chr1:82578124-82578143 MsG0180004773.01.T01:CDS 40.0%
!! AACTGTTTGACTTGTGTGAG+AGG - Chr1:82576229-82576248 MsG0180004773.01.T01:intron 40.0%
!! ATTAAGGGTATCTCAGCTAG+TGG + Chr1:82583018-82583037 None:intergenic 40.0%
!! ATTTTAACCCTCCTGTTCCT+AGG - Chr1:82578123-82578142 MsG0180004773.01.T01:CDS 40.0%
!! CTGTTTCTGAAGATTCAGCA+AGG + Chr1:82579076-82579095 None:intergenic 40.0%
!! CTTCATGCAATCTGTTTTGG+TGG + Chr1:82574376-82574395 None:intergenic 40.0%
!! CTTGTTGCTTTGTTTGAGAG+AGG + Chr1:82576740-82576759 None:intergenic 40.0%
!! GGAATGGATTTGGTAATGAG+TGG - Chr1:82574513-82574532 MsG0180004773.01.T01:intron 40.0%
!! GTCTGTTTGGCACTTGTTTT+TGG - Chr1:82573681-82573700 MsG0180004773.01.T01:intron 40.0%
!! TTCTGTCTTTTTGATTGGGC+TGG + Chr1:82579793-82579812 None:intergenic 40.0%
!! TTTTATTTGTTCAGGGGCCT+GGG - Chr1:82577137-82577156 MsG0180004773.01.T01:intron 40.0%
!! TTTTTATTTGTTCAGGGGCC+TGG - Chr1:82577136-82577155 MsG0180004773.01.T01:intron 40.0%
!!! AATTTGGTGACGTCCTTTTC+AGG + Chr1:82581824-82581843 None:intergenic 40.0%
!!! ACTTGTTTTTGGGTAGGTTG+AGG - Chr1:82573692-82573711 MsG0180004773.01.T01:intron 40.0%
!!! AGCTCTTTTAGAGCTTGACT+TGG - Chr1:82578362-82578381 MsG0180004773.01.T01:intron 40.0%
!!! CAATCTGTTTTGGTGGTGTA+AGG + Chr1:82574369-82574388 None:intergenic 40.0%
!!! CAATGGAGGCTTGTCATTTT+AGG + Chr1:82574675-82574694 None:intergenic 40.0%
!!! GACACTCATTTTGAAACGGA+GGG - Chr1:82575875-82575894 MsG0180004773.01.T01:intron 40.0%
!!! GACACTCATTTTGAAACGGA+GGG + Chr1:82575894-82575875 None:intergenic 40.0%
!!! TTTGGCACTTGTTTTTGGGT+AGG - Chr1:82573686-82573705 MsG0180004773.01.T01:intron 40.0%
AAAATGCAGACCAGGCATGA+AGG + Chr1:82575072-82575091 None:intergenic 45.0%
AAACGAGTTCGACTCTCGAA+TGG + Chr1:82582237-82582256 None:intergenic 45.0%
AAAGAATAGTCCCCTGTTGG+TGG + Chr1:82575011-82575030 None:intergenic 45.0%
AAATGGTGTTCCACCAACAG+GGG - Chr1:82574998-82575017 MsG0180004773.01.T01:intron 45.0%
AACAATATGTTGTGTGGGCC+CGG - Chr1:82574024-82574043 MsG0180004773.01.T01:intron 45.0%
AACATCCAACTCAGACTCTC+GGG + Chr1:82577353-82577372 None:intergenic 45.0%
AACCCCCAAAGTAAACCAAG+TGG + Chr1:82578286-82578305 None:intergenic 45.0%
AACTCCACACAGTACGCAAA+CGG - Chr1:82582086-82582105 MsG0180004773.01.T01:intron 45.0%
AAGAGTGAAAGTGACACACG+AGG + Chr1:82582175-82582194 None:intergenic 45.0%
AAGGGGAACCAGATGAAAGA+AGG + Chr1:82582048-82582067 None:intergenic 45.0%
ACAAGAGCGAAGAGATGAAG+AGG - Chr1:82576755-82576774 MsG0180004773.01.T01:intron 45.0%
ACAATTAAGCTCCAGCAGTG+AGG - Chr1:82574701-82574720 MsG0180004773.01.T01:intron 45.0%
ACCCAGATGTTTGTATGGAG+TGG + Chr1:82582289-82582308 None:intergenic 45.0%
ACGTGGCAAATAAACGTCCA+AGG - Chr1:82580759-82580778 MsG0180004773.01.T01:intron 45.0%
ACGTTACCTGTAAATGCGTC+TGG - Chr1:82579742-82579761 MsG0180004773.01.T01:CDS 45.0%
ACTGCAACATCCGTAGAAGA+TGG + Chr1:82576494-82576513 None:intergenic 45.0%
AGCAGTGAACTCAAAACTCC+TGG - Chr1:82580039-82580058 MsG0180004773.01.T01:intron 45.0%
AGCTGCTACATGACTACAAC+AGG + Chr1:82577991-82578010 None:intergenic 45.0%
AGGGATCAGGGTTCAAAACT+TGG - Chr1:82572732-82572751 MsG0180004773.01.T01:three_prime_UTR 45.0%
AGTGAGGGTTGCGTGTTTAA+AGG - Chr1:82574717-82574736 MsG0180004773.01.T01:intron 45.0%
AGTGAGTACTTACATCAGGG+AGG + Chr1:82582660-82582679 None:intergenic 45.0%
AGTTGGGGTTCTTGTGAATC+TGG + Chr1:82574426-82574445 None:intergenic 45.0%
ATCGCCAAATGACCTGAATG+AGG + Chr1:82574182-82574201 None:intergenic 45.0%
ATCTTCTACGGATGTTGCAG+TGG - Chr1:82576493-82576512 MsG0180004773.01.T01:intron 45.0%
ATGGAGATACAGTTTCACCG+GGG + Chr1:82577414-82577433 None:intergenic 45.0%
ATGGTAATCCGGACTTAGCT+GGG - Chr1:82578157-82578176 MsG0180004773.01.T01:CDS 45.0%
ATGTGTAGGGACTCGTTACT+TGG - Chr1:82583394-82583413 MsG0180004773.01.T01:intron 45.0%
ATTCTTCTCCTGAAGTGGGA+AGG + Chr1:82572400-82572419 None:intergenic 45.0%
CAAACCCAACAATGCATGAG+AGG + Chr1:82582990-82583009 None:intergenic 45.0%
CAACATCCAACTCAGACTCT+CGG + Chr1:82577354-82577373 None:intergenic 45.0%
CAATTAAGCTCCAGCAGTGA+GGG - Chr1:82574702-82574721 MsG0180004773.01.T01:intron 45.0%
CACCATTTGTCCAAGTGCAT+AGG + Chr1:82577850-82577869 None:intergenic 45.0%
CAGATTTCAACATCGGCGAA+TGG + Chr1:82580915-82580934 None:intergenic 45.0%
CAGCTCATACAAGAGCCATT+TGG + Chr1:82574070-82574089 None:intergenic 45.0%
CAGTAAAACAACCCCAGCAA+GGG + Chr1:82582557-82582576 None:intergenic 45.0%
CAGTTAAGGACGAAACGTTC+GGG + Chr1:82578238-82578257 None:intergenic 45.0%
CAGTTGATCTGTTTCCTCCT+TGG + Chr1:82576214-82576233 None:intergenic 45.0%
CATAACAAGATACACGGACG+AGG - Chr1:82575173-82575192 MsG0180004773.01.T01:intron 45.0%
CATCAAATACATCCCCACAG+AGG - Chr1:82580150-82580169 MsG0180004773.01.T01:intron 45.0%
CCAAACAGACTAAACCAGCA+AGG + Chr1:82573671-82573690 None:intergenic 45.0%
CCCACTCCATACAAACATCT+GGG - Chr1:82582285-82582304 MsG0180004773.01.T01:intron 45.0%
CCCAGATGTTTGTATGGAGT+GGG + Chr1:82582288-82582307 None:intergenic 45.0%
CGTGGCAAATAAACGTCCAA+GGG - Chr1:82580760-82580779 MsG0180004773.01.T01:intron 45.0%
CTCCATACAAACATCTGGGT+AGG - Chr1:82582289-82582308 MsG0180004773.01.T01:intron 45.0%
CTCTCTTCCATCCAAACACA+TGG + Chr1:82581324-82581343 None:intergenic 45.0%
CTGAGAGCAGAGAGACTAAA+TGG - Chr1:82574785-82574804 MsG0180004773.01.T01:intron 45.0%
CTGCAAAATAAGGAGGCTGA+AGG - Chr1:82579214-82579233 MsG0180004773.01.T01:intron 45.0%
CTGGTTTCAGGGGAAAGAAT+TGG - Chr1:82579588-82579607 MsG0180004773.01.T01:intron 45.0%
CTTGTGCAAACGTTACAGAG+AGG - Chr1:82577383-82577402 MsG0180004773.01.T01:intron 45.0%
GACTACAACAGGGAGGATAA+AGG + Chr1:82577980-82577999 None:intergenic 45.0%
GAGGATAGTACCAAAGGTGA+AGG + Chr1:82583130-82583149 None:intergenic 45.0%
GATGGAGATACAGTTTCACC+GGG + Chr1:82577415-82577434 None:intergenic 45.0%
GCAAAAGAATAGTCCCCTGT+TGG + Chr1:82575014-82575033 None:intergenic 45.0%
GCACATTATTCTGGCAACCA+AGG + Chr1:82574404-82574423 None:intergenic 45.0%
GCTAAACAATCAATGTGGGG+TGG - Chr1:82574490-82574509 MsG0180004773.01.T01:intron 45.0%
GCTGCTACATGACTACAACA+GGG + Chr1:82577990-82578009 None:intergenic 45.0%
GGTGGAAGTTCTGTCTTTGA+TGG + Chr1:82577433-82577452 None:intergenic 45.0%
GGTGGTGTAAGGATATGCAT+CGG + Chr1:82574358-82574377 None:intergenic 45.0%
GTAAATGGTGTTCCACCAAC+AGG - Chr1:82574996-82575015 MsG0180004773.01.T01:intron 45.0%
GTGAGGGTTGCGTGTTTAAA+GGG - Chr1:82574718-82574737 MsG0180004773.01.T01:intron 45.0%
GTTTAGGCTTCAAGCCCAAA+TGG - Chr1:82574052-82574071 MsG0180004773.01.T01:intron 45.0%
TAACCACAATCAGAACTGCC+AGG + Chr1:82580060-82580079 None:intergenic 45.0%
TAACTCGATGCTCGCACAAA+AGG - Chr1:82582008-82582027 MsG0180004773.01.T01:intron 45.0%
TAGGTGTATGCACTTACTGG+TGG - Chr1:82572521-82572540 MsG0180004773.01.T01:three_prime_UTR 45.0%
TCACCCTCTCATGCATTGTT+GGG - Chr1:82582983-82583002 MsG0180004773.01.T01:intron 45.0%
TCAGGAGAAGAATTCTAGCG+AGG - Chr1:82572407-82572426 MsG0180004773.01.T01:three_prime_UTR 45.0%
TCAGTCTTTACCTTCATGCC+TGG - Chr1:82575059-82575078 MsG0180004773.01.T01:intron 45.0%
TCATTCAGGTCATTTGGCGA+TGG - Chr1:82574181-82574200 MsG0180004773.01.T01:intron 45.0%
TCCTGGCAATTAACATAGCC+CGG + Chr1:82576469-82576488 None:intergenic 45.0%
TCGACGGTGGAAAATTACGA+CGG - Chr1:82581260-82581279 MsG0180004773.01.T01:intron 45.0%
TCGCCAAATGACCTGAATGA+GGG + Chr1:82574181-82574200 None:intergenic 45.0%
TCTTTACTCTTGTGCCCCAT+AGG - Chr1:82572967-82572986 MsG0180004773.01.T01:three_prime_UTR 45.0%
TGATGATCTGGTGGTTTCGA+CGG - Chr1:82581244-82581263 MsG0180004773.01.T01:intron 45.0%
TGCCAGGAATCCATCTTCTA+CGG - Chr1:82576481-82576500 MsG0180004773.01.T01:intron 45.0%
TGCGTTTGTATGTGTGCTTC+GGG - Chr1:82582398-82582417 MsG0180004773.01.T01:intron 45.0%
TGGACTAAATGGAGCATACC+CGG - Chr1:82581450-82581469 MsG0180004773.01.T01:intron 45.0%
TGGAGATGACGAGAGAATGA+TGG - Chr1:82581190-82581209 MsG0180004773.01.T01:intron 45.0%
TGTGTTGGACCACTACTATG+TGG - Chr1:82581872-82581891 MsG0180004773.01.T01:intron 45.0%
TTCACCCTCTCATGCATTGT+TGG - Chr1:82582982-82583001 MsG0180004773.01.T01:intron 45.0%
TTCCAGTCAGGAATCGAACT+CGG - Chr1:82578207-82578226 MsG0180004773.01.T01:CDS 45.0%
TTCCTGACTGGAACAATCCT+TGG + Chr1:82578200-82578219 None:intergenic 45.0%
TTGTTGAATGGAACATGGCC+AGG - Chr1:82582958-82582977 MsG0180004773.01.T01:intron 45.0%
TTTAACCCTCCTGTTCCTAG+GGG - Chr1:82578125-82578144 MsG0180004773.01.T01:CDS 45.0%
TTTGCCATTCTTTGTTGCGG+TGG - Chr1:82581151-82581170 MsG0180004773.01.T01:intron 45.0%
! AAGCCTTATCCCACTAAGTG+GGG + Chr1:82573566-82573585 None:intergenic 45.0%
! AATGCGGTTGTTGACTACCA+TGG + Chr1:82574335-82574354 None:intergenic 45.0%
! ACAGCTTTTGTTGGAACCCT+TGG + Chr1:82579015-82579034 None:intergenic 45.0%
! ACTTTTAGTAGCGGTGACGA+TGG - Chr1:82582443-82582462 MsG0180004773.01.T01:intron 45.0%
! ATCATGGAAGGCACGACTAT+TGG + Chr1:82577454-82577473 None:intergenic 45.0%
! ATCCGTAGAAGATGGATTCC+TGG + Chr1:82576486-82576505 None:intergenic 45.0%
! CAAGAATCTTGTTTGCTGCG+GGG - Chr1:82574542-82574561 MsG0180004773.01.T01:intron 45.0%
! CAAGCCTTATCCCACTAAGT+GGG + Chr1:82573567-82573586 None:intergenic 45.0%
! CACTATGCACAACGCCTTTT+TGG - Chr1:82580669-82580688 MsG0180004773.01.T01:intron 45.0%
! CCAGATAACACAAGTTCTGG+GGG - Chr1:82579469-82579488 MsG0180004773.01.T01:intron 45.0%
! CTTGGTTTACTTTGGGGGTT+TGG - Chr1:82578286-82578305 MsG0180004773.01.T01:intron 45.0%
! GCAAGAATCTTGTTTGCTGC+GGG - Chr1:82574541-82574560 MsG0180004773.01.T01:intron 45.0%
! GCATGCAATGAACTGGTTTC+AGG - Chr1:82579576-82579595 MsG0180004773.01.T01:CDS 45.0%
! GGAGCATTATGCAGCTAATC+TGG + Chr1:82580707-82580726 None:intergenic 45.0%
! GGATCGACCTCTAGAAAACT+TGG + Chr1:82573964-82573983 None:intergenic 45.0%
! GTTGTTGACTACCATGGAAG+AGG + Chr1:82574329-82574348 None:intergenic 45.0%
! GTTTGGCTATTGATGGCAAC+TGG - Chr1:82583077-82583096 MsG0180004773.01.T01:intron 45.0%
! TGGTTCCCCTTCATCTTTTC+AGG - Chr1:82582057-82582076 MsG0180004773.01.T01:intron 45.0%
! TGGTTTGAGGTAAGGGATCA+GGG - Chr1:82572720-82572739 MsG0180004773.01.T01:three_prime_UTR 45.0%
! TTTGAAACGGAGGGAGTAGT+TGG - Chr1:82575884-82575903 MsG0180004773.01.T01:intron 45.0%
!! AGCACAACTGGTTTGAGGTA+AGG - Chr1:82572712-82572731 MsG0180004773.01.T01:three_prime_UTR 45.0%
!! CCTTGCTGGTTTAGTCTGTT+TGG - Chr1:82573668-82573687 MsG0180004773.01.T01:intron 45.0%
!! CGTGTGTCACTTTCACTCTT+CGG - Chr1:82582175-82582194 MsG0180004773.01.T01:intron 45.0%
!! CTTTCAGGTTCCTTCACCTT+TGG - Chr1:82583117-82583136 MsG0180004773.01.T01:intron 45.0%
!! GCACAACTGGTTTGAGGTAA+GGG - Chr1:82572713-82572732 MsG0180004773.01.T01:three_prime_UTR 45.0%
!! GCTTTGTTTGAGAGAGGATC+AGG + Chr1:82576734-82576753 None:intergenic 45.0%
!! GGAAGTGCAGGTATTTTGCT+AGG + Chr1:82578902-82578921 None:intergenic 45.0%
!! GGGTTGTTTTACTGCTCGAT+TGG - Chr1:82582563-82582582 MsG0180004773.01.T01:intron 45.0%
!! TAGAAGCCTAAGGAGGCATT+TGG + Chr1:82578787-82578806 None:intergenic 45.0%
!!! CGACACTCATTTTGAAACGG+AGG - Chr1:82575874-82575893 MsG0180004773.01.T01:intron 45.0%
!!! CGACACTCATTTTGAAACGG+AGG + Chr1:82575893-82575874 None:intergenic 45.0%
!!! GGGGTTTGGTTTTGAGATTG+TGG - Chr1:82578300-82578319 MsG0180004773.01.T01:intron 45.0%
!! ACATTTATTTAATTAATAAA+AGG - Chr1:82580805-82580824 MsG0180004773.01.T01:intron 5.0%
!! ATAAATAATACTTATTAAAA+GGG + Chr1:82576794-82576813 None:intergenic 5.0%
!! TATAAATAATACTTATTAAA+AGG + Chr1:82576795-82576814 None:intergenic 5.0%
!! TTTAATAAGTATTATTTATA+TGG - Chr1:82576795-82576814 MsG0180004773.01.T01:CDS 5.0%
!!! TTCTTTTTAATTAAATTTTT+AGG - Chr1:82579299-82579318 MsG0180004773.01.T01:CDS 5.0%
!!! TTTATTTATTTATTTTATCT+TGG - Chr1:82579717-82579736 MsG0180004773.01.T01:intron 5.0%
AATCAATGTGGGGTGGGGAA+TGG - Chr1:82574497-82574516 MsG0180004773.01.T01:intron 50.0%
AATGAGTGCCCTTAGGGCAT+TGG + Chr1:82575572-82575591 None:intergenic 50.0%
ACCAAGTGGTTGAGCTCAAG+TGG + Chr1:82578272-82578291 None:intergenic 50.0%
ACCACTTGAGCTCAACCACT+TGG - Chr1:82578268-82578287 MsG0180004773.01.T01:intron 50.0%
ACGTTTCACAGGAGATGGAG+CGG - Chr1:82576694-82576713 MsG0180004773.01.T01:intron 50.0%
ACTCCACACAGTACGCAAAC+GGG - Chr1:82582087-82582106 MsG0180004773.01.T01:intron 50.0%
ACTTACCTCCCAGCTAAGTC+CGG + Chr1:82578168-82578187 None:intergenic 50.0%
AGATACAGTTTCACCGGGGT+TGG + Chr1:82577410-82577429 None:intergenic 50.0%
AGGGACCAACCAAGCTCATT+AGG - Chr1:82580230-82580249 MsG0180004773.01.T01:intron 50.0%
AGGGTTGCGTGTTTAAAGGG+AGG - Chr1:82574721-82574740 MsG0180004773.01.T01:intron 50.0%
AGGTAAGTAAAGTCCGGCCA+AGG - Chr1:82578180-82578199 MsG0180004773.01.T01:CDS 50.0%
AGGTTTGGATGCAAGACACG+TGG + Chr1:82581425-82581444 None:intergenic 50.0%
ATGACAAGCCTCCATTGGCA+AGG - Chr1:82574678-82574697 MsG0180004773.01.T01:intron 50.0%
ATGAGCATAGCTCAGTTGGC+AGG - Chr1:82583746-82583765 MsG0180004773.01.T01:five_prime_UTR 50.0%
ATTAGAGTCGGAAACGGGGT+TGG - Chr1:82572687-82572706 MsG0180004773.01.T01:three_prime_UTR 50.0%
CAAGCTCATCAGCTGGACTT+CGG - Chr1:82577877-82577896 MsG0180004773.01.T01:intron 50.0%
CAATCTGCAAGCTCATCAGC+TGG - Chr1:82577870-82577889 MsG0180004773.01.T01:intron 50.0%
CACCATGAGCATAGCTCAGT+TGG - Chr1:82583742-82583761 MsG0180004773.01.T01:five_prime_UTR 50.0%
CAGCTAAGTCCGGATTACCA+TGG + Chr1:82578158-82578177 None:intergenic 50.0%
CAGTGCTACATGGAGCAATG+AGG - Chr1:82580116-82580135 MsG0180004773.01.T01:intron 50.0%
CATGGTAATCCGGACTTAGC+TGG - Chr1:82578156-82578175 MsG0180004773.01.T01:CDS 50.0%
CCACTTAGTGGGATAAGGCT+TGG - Chr1:82573565-82573584 MsG0180004773.01.T01:intron 50.0%
CCCCCAGAACTTGTGTTATC+TGG + Chr1:82579472-82579491 None:intergenic 50.0%
CCTGGCAATTAACATAGCCC+GGG + Chr1:82576468-82576487 None:intergenic 50.0%
CGAAACAACGGGAACACCAA+AGG - Chr1:82579264-82579283 MsG0180004773.01.T01:intron 50.0%
CGATGCAGATATTGGGGGAA+CGG - Chr1:82574461-82574480 MsG0180004773.01.T01:intron 50.0%
CTCGACGTTGTCTGCTATTC+CGG + Chr1:82582899-82582918 None:intergenic 50.0%
CTCGCTTGAAAGTTCCTTGC+TGG - Chr1:82573654-82573673 MsG0180004773.01.T01:intron 50.0%
CTCTCAGCATGGACTTGCAT+GGG - Chr1:82574613-82574632 MsG0180004773.01.T01:intron 50.0%
CTTATCCCACTAAGTGGGGT+CGG + Chr1:82573562-82573581 None:intergenic 50.0%
GAAGAAGAAAGCGGTTGCGA+CGG - Chr1:82581221-82581240 MsG0180004773.01.T01:intron 50.0%
GAATGGAGTCCATCGAGAAG+TGG + Chr1:82582220-82582239 None:intergenic 50.0%
GAGGAAGCCATGTGTTTGGA+TGG - Chr1:82581314-82581333 MsG0180004773.01.T01:intron 50.0%
GATGCAGATATTGGGGGAAC+GGG - Chr1:82574462-82574481 MsG0180004773.01.T01:intron 50.0%
GCAAGGAACTTTCAAGCGAG+TGG + Chr1:82573654-82573673 None:intergenic 50.0%
GCAGATGCAAAGTGACGGTT+AGG + Chr1:82575994-82576013 None:intergenic 50.0%
GCAGTAAAACAACCCCAGCA+AGG + Chr1:82582558-82582577 None:intergenic 50.0%
GCCCACTCCATACAAACATC+TGG - Chr1:82582284-82582303 MsG0180004773.01.T01:intron 50.0%
GCTACATGACTACAACAGGG+AGG + Chr1:82577987-82578006 None:intergenic 50.0%
GCTCTTCCAAATGCCTCCTT+AGG - Chr1:82578778-82578797 MsG0180004773.01.T01:intron 50.0%
GCTGGGAGGTAAGTAAAGTC+CGG - Chr1:82578174-82578193 MsG0180004773.01.T01:CDS 50.0%
GCTTTCTGTTAGGTGGCAAC+CGG - Chr1:82579959-82579978 MsG0180004773.01.T01:intron 50.0%
GGAAGAGGAAGCCATGTGTT+TGG - Chr1:82581310-82581329 MsG0180004773.01.T01:intron 50.0%
GGACTTGCATGGGAGAAGAT+TGG - Chr1:82574623-82574642 MsG0180004773.01.T01:intron 50.0%
GTGGAAAATTACGACGGCGA+CGG - Chr1:82581266-82581285 MsG0180004773.01.T01:intron 50.0%
GTGTTTGGTCCACTTCTCGA+TGG - Chr1:82582208-82582227 MsG0180004773.01.T01:intron 50.0%
TAAAACAACCCCAGCAAGGG+AGG + Chr1:82582554-82582573 None:intergenic 50.0%
TACCATAGCCTCTCTTCGCA+TGG - Chr1:82577492-82577511 MsG0180004773.01.T01:intron 50.0%
TACCATGCGAAGAGAGGCTA+TGG + Chr1:82577497-82577516 None:intergenic 50.0%
TCACTTTCACTCTTCGGCAC+AGG - Chr1:82582181-82582200 MsG0180004773.01.T01:intron 50.0%
TCCAGTCAGGAATCGAACTC+GGG - Chr1:82578208-82578227 MsG0180004773.01.T01:CDS 50.0%
TCGTCACATGTCTCTCAGCA+TGG - Chr1:82574602-82574621 MsG0180004773.01.T01:intron 50.0%
TCTCTCAGCATGGACTTGCA+TGG - Chr1:82574612-82574631 MsG0180004773.01.T01:intron 50.0%
TGACTGGAACAATCCTTGGC+CGG + Chr1:82578196-82578215 None:intergenic 50.0%
TGATAGGTTCCTCCCTTGCT+GGG - Chr1:82582542-82582561 MsG0180004773.01.T01:intron 50.0%
TGCAGTGGATCCACTTGTTC+AGG - Chr1:82576508-82576527 MsG0180004773.01.T01:intron 50.0%
TGCCAACTGAGCTATGCTCA+TGG + Chr1:82583747-82583766 None:intergenic 50.0%
TGGATCCACTTGTTCAGGTG+TGG - Chr1:82576513-82576532 MsG0180004773.01.T01:intron 50.0%
TGTCGTCCAGACGCATTTAC+AGG + Chr1:82579751-82579770 None:intergenic 50.0%
TTAGAGTCGGAAACGGGGTT+GGG - Chr1:82572688-82572707 MsG0180004773.01.T01:three_prime_UTR 50.0%
TTAGAGTGATACCAGCCACC+AGG - Chr1:82580203-82580222 MsG0180004773.01.T01:intron 50.0%
TTCGGCACAGGATTCGTGTT+TGG - Chr1:82582193-82582212 MsG0180004773.01.T01:intron 50.0%
TTGATAGGTTCCTCCCTTGC+TGG - Chr1:82582541-82582560 MsG0180004773.01.T01:intron 50.0%
TTGCAGCAGCAGAGTTCCTA+TGG - Chr1:82582932-82582951 MsG0180004773.01.T01:intron 50.0%
! ACTCCTGGCAGTTCTGATTG+TGG - Chr1:82580054-82580073 MsG0180004773.01.T01:intron 50.0%
! ATGGAAGGCACGACTATTGG+TGG + Chr1:82577451-82577470 None:intergenic 50.0%
! CCAAGCCTTATCCCACTAAG+TGG + Chr1:82573568-82573587 None:intergenic 50.0%
! CTGGTTTGAGGTAAGGGATC+AGG - Chr1:82572719-82572738 MsG0180004773.01.T01:three_prime_UTR 50.0%
! GGGATCAAAAGCGCAAGGTA+CGG - Chr1:82579616-82579635 MsG0180004773.01.T01:intron 50.0%
! TCTTTTTGTGCTGGGGGAAC+AGG + Chr1:82577600-82577619 None:intergenic 50.0%
!! TGGGTAGCACAACTGGTTTG+AGG - Chr1:82572707-82572726 MsG0180004773.01.T01:three_prime_UTR 50.0%
AAACACGCAACCCTCACTGC+TGG + Chr1:82574715-82574734 None:intergenic 55.0%
AAATTACGACGGCGACGGAG+AGG - Chr1:82581271-82581290 MsG0180004773.01.T01:intron 55.0%
AATTACGACGGCGACGGAGA+GGG - Chr1:82581272-82581291 MsG0180004773.01.T01:intron 55.0%
ACATAGCCCGGGATACTGCA+TGG + Chr1:82576457-82576476 None:intergenic 55.0%
ACCCGAGTTCGATTCCTGAC+TGG + Chr1:82578212-82578231 None:intergenic 55.0%
ATACCAGCCACCAGGTGCTA+GGG - Chr1:82580211-82580230 MsG0180004773.01.T01:intron 55.0%
ATGCATGAGAGGGTGAAGCC+TGG + Chr1:82582979-82582998 None:intergenic 55.0%
CCCGGGCTATGTTAATTGCC+AGG - Chr1:82576465-82576484 MsG0180004773.01.T01:intron 55.0%
CCTCCTGTTCCTAGGGGAAA+GGG - Chr1:82578131-82578150 MsG0180004773.01.T01:CDS 55.0%
CCTTTCCCCTAGGAACAGGA+GGG + Chr1:82578133-82578152 None:intergenic 55.0%
CGACCCCACTTAGTGGGATA+AGG - Chr1:82573560-82573579 MsG0180004773.01.T01:intron 55.0%
CGGAATAGCAGACAACGTCG+AGG - Chr1:82582897-82582916 MsG0180004773.01.T01:intron 55.0%
CGGGTCACACTGCGAAACAA+CGG - Chr1:82579252-82579271 MsG0180004773.01.T01:intron 55.0%
CTCCACACAGTACGCAAACG+GGG - Chr1:82582088-82582107 MsG0180004773.01.T01:intron 55.0%
CTCCTGTTCCTAGGGGAAAG+GGG - Chr1:82578132-82578151 MsG0180004773.01.T01:CDS 55.0%
CTGTTAGGTGGCAACCGGAA+TGG - Chr1:82579964-82579983 MsG0180004773.01.T01:intron 55.0%
GATAGGTTCCTCCCTTGCTG+GGG - Chr1:82582543-82582562 MsG0180004773.01.T01:intron 55.0%
GGAAAGGGGCCATGGTAATC+CGG - Chr1:82578146-82578165 MsG0180004773.01.T01:CDS 55.0%
GGCAGTGATGCTGAGCAAAG+AGG + Chr1:82580870-82580889 None:intergenic 55.0%
GGCCAAGGATTGTTCCAGTC+AGG - Chr1:82578195-82578214 MsG0180004773.01.T01:CDS 55.0%
GGGTCACACTGCGAAACAAC+GGG - Chr1:82579253-82579272 MsG0180004773.01.T01:intron 55.0%
GGGTTTGGATGCAAGACACG+TGG - Chr1:82580742-82580761 MsG0180004773.01.T01:intron 55.0%
GTAATCCGGACTTAGCTGGG+AGG - Chr1:82578160-82578179 MsG0180004773.01.T01:CDS 55.0%
GTCCTTGCCATGCAGTATCC+CGG - Chr1:82576447-82576466 MsG0180004773.01.T01:intron 55.0%
GTCGACCACACCTGAACAAG+TGG + Chr1:82576521-82576540 None:intergenic 55.0%
TCAACATCGGCGAATGGCGA+TGG + Chr1:82580909-82580928 None:intergenic 55.0%
TCCTTGCCATGCAGTATCCC+GGG - Chr1:82576448-82576467 MsG0180004773.01.T01:intron 55.0%
TCGGCCACCGCAACAAAGAA+TGG + Chr1:82581158-82581177 None:intergenic 55.0%
TGATCTGGTGGTTTCGACGG+TGG - Chr1:82581247-82581266 MsG0180004773.01.T01:intron 55.0%
TGTGGGCCCGGACATTGTTT+AGG - Chr1:82574036-82574055 MsG0180004773.01.T01:intron 55.0%
TTGCGACGGTGATGATCTGG+TGG - Chr1:82581235-82581254 MsG0180004773.01.T01:intron 55.0%
TTTGCATCGAGGCGGAGATC+AGG - Chr1:82579432-82579451 MsG0180004773.01.T01:intron 55.0%
! GGCTCTGCTGATTGACAGCA+CGG + Chr1:82582129-82582148 None:intergenic 55.0%
! GTGGCCGAAAGAGAGTGTGA+TGG - Chr1:82581170-82581189 MsG0180004773.01.T01:intron 55.0%
! TGCTGATTGACAGCACGGTG+AGG + Chr1:82582124-82582143 None:intergenic 55.0%
! TGTGGGGTGGGGAATGGATT+TGG - Chr1:82574503-82574522 MsG0180004773.01.T01:intron 55.0%
! TTTTGTGCTGGGGGAACAGG+TGG + Chr1:82577597-82577616 None:intergenic 55.0%
ACATCGGCGAATGGCGATGG+AGG + Chr1:82580906-82580925 None:intergenic 60.0%
ACGGGGTTGGGTAGCACAAC+TGG - Chr1:82572700-82572719 MsG0180004773.01.T01:three_prime_UTR 60.0%
ACTAAGTGGGGTCGGCTGCA+TGG + Chr1:82573554-82573573 None:intergenic 60.0%
ATGCAGCCGACCCCACTTAG+TGG - Chr1:82573553-82573572 MsG0180004773.01.T01:intron 60.0%
ATTACGACGGCGACGGAGAG+GGG - Chr1:82581273-82581292 MsG0180004773.01.T01:intron 60.0%
CATCGGCGAATGGCGATGGA+GGG + Chr1:82580905-82580924 None:intergenic 60.0%
CCCTCCTGTTCCTAGGGGAA+AGG - Chr1:82578130-82578149 MsG0180004773.01.T01:CDS 60.0%
CCCTTTCCCCTAGGAACAGG+AGG + Chr1:82578134-82578153 None:intergenic 60.0%
CGACAGCGTTTGCATCGAGG+CGG - Chr1:82579424-82579443 MsG0180004773.01.T01:intron 60.0%
CGCCTCGATGCAAACGCTGT+CGG + Chr1:82579426-82579445 None:intergenic 60.0%
CGGTTGCGACGGTGATGATC+TGG - Chr1:82581232-82581251 MsG0180004773.01.T01:intron 60.0%
CTGGGGGAACAGGTGGAGAT+GGG + Chr1:82577590-82577609 None:intergenic 60.0%
GACCCCGTTTGCGTACTGTG+TGG + Chr1:82582093-82582112 None:intergenic 60.0%
GATACCAGCCACCAGGTGCT+AGG - Chr1:82580210-82580229 MsG0180004773.01.T01:intron 60.0%
GGAACAGGTGGAGATGGGGA+AGG + Chr1:82577585-82577604 None:intergenic 60.0%
GGTTGCCCGAGAGTCTGAGT+TGG - Chr1:82577345-82577364 MsG0180004773.01.T01:intron 60.0%
GTTACAGAGAGGGCCAACCC+CGG - Chr1:82577394-82577413 MsG0180004773.01.T01:intron 60.0%
TACCATGGCCCCTTTCCCCT+AGG + Chr1:82578143-82578162 None:intergenic 60.0%
TGCAGCCGACCCCACTTAGT+GGG - Chr1:82573554-82573573 MsG0180004773.01.T01:intron 60.0%
TGCCGACAGCGTTTGCATCG+AGG - Chr1:82579421-82579440 MsG0180004773.01.T01:intron 60.0%
TGGGGGAACAGGTGGAGATG+GGG + Chr1:82577589-82577608 None:intergenic 60.0%
TTCCTAGGGGAAAGGGGCCA+TGG - Chr1:82578138-82578157 MsG0180004773.01.T01:CDS 60.0%
! CTTGGTTGGTCCCTAGCACC+TGG + Chr1:82580224-82580243 None:intergenic 60.0%
GCCCGGGATACTGCATGGCA+AGG + Chr1:82576452-82576471 None:intergenic 65.0%
GCTGGGGGAACAGGTGGAGA+TGG + Chr1:82577591-82577610 None:intergenic 65.0%
GGCCCCTTTCCCCTAGGAAC+AGG + Chr1:82578137-82578156 None:intergenic 65.0%
TTACGACGGCGACGGAGAGG+GGG - Chr1:82581274-82581293 MsG0180004773.01.T01:intron 65.0%
! GGTTGGTCCCTAGCACCTGG+TGG + Chr1:82580221-82580240 None:intergenic 65.0%
AGAGGGGGCGGTGGTGCACA+GGG - Chr1:82581289-82581308 MsG0180004773.01.T01:intron 70.0%
CGAATGGCGATGGAGGGCGG+CGG + Chr1:82580899-82580918 None:intergenic 70.0%
CGGCGAATGGCGATGGAGGG+CGG + Chr1:82580902-82580921 None:intergenic 70.0%
GGCGGTGGTGCACAGGGAAG+AGG - Chr1:82581295-82581314 MsG0180004773.01.T01:intron 70.0%
GGTCCCTAGCACCTGGTGGC+TGG + Chr1:82580217-82580236 None:intergenic 70.0%
ATGGCGATGGAGGGCGGCGG+TGG + Chr1:82580896-82580915 None:intergenic 75.0%
GAGAGGGGGCGGTGGTGCAC+AGG - Chr1:82581288-82581307 MsG0180004773.01.T01:intron 75.0%
GATGGAGGGCGGCGGTGGAG+AGG + Chr1:82580891-82580910 None:intergenic 75.0%
! CGACGGCGACGGAGAGGGGG+CGG - Chr1:82581277-82581296 MsG0180004773.01.T01:intron 80.0%
! CGGCGACGGAGAGGGGGCGG+TGG - Chr1:82581280-82581299 MsG0180004773.01.T01:intron 85.0%
Chromosome Type Strat End Strand Name
Chr1 gene 82572291 82583768 82572291 ID=MsG0180004773.01;Name=MsG0180004773.01
Chr1 mRNA 82572389 82583768 82572389 ID=MsG0180004773.01.T01;Parent=MsG0180004773.01;Name=MsG0180004773.01.T01;_AED=0.40;_eAED=0.42;_QI=66|0.70|0.72|1|0.76|0.77|18|1000|564
Chr1 exon 82572389 82573511 82572389 ID=MsG0180004773.01.T01:exon:8589;Parent=MsG0180004773.01.T01
Chr1 exon 82573753 82573980 82573753 ID=MsG0180004773.01.T01:exon:8588;Parent=MsG0180004773.01.T01
Chr1 exon 82576427 82576461 82576427 ID=MsG0180004773.01.T01:exon:8587;Parent=MsG0180004773.01.T01
Chr1 exon 82576569 82576629 82576569 ID=MsG0180004773.01.T01:exon:8586;Parent=MsG0180004773.01.T01
Chr1 exon 82576774 82576845 82576774 ID=MsG0180004773.01.T01:exon:8585;Parent=MsG0180004773.01.T01
Chr1 exon 82576964 82577059 82576964 ID=MsG0180004773.01.T01:exon:8584;Parent=MsG0180004773.01.T01
Chr1 exon 82578121 82578231 82578121 ID=MsG0180004773.01.T01:exon:8583;Parent=MsG0180004773.01.T01
Chr1 exon 82578546 82578713 82578546 ID=MsG0180004773.01.T01:exon:8582;Parent=MsG0180004773.01.T01
Chr1 exon 82578875 82578908 82578875 ID=MsG0180004773.01.T01:exon:8581;Parent=MsG0180004773.01.T01
Chr1 exon 82579059 82579168 82579059 ID=MsG0180004773.01.T01:exon:8580;Parent=MsG0180004773.01.T01
Chr1 exon 82579283 82579375 82579283 ID=MsG0180004773.01.T01:exon:8579;Parent=MsG0180004773.01.T01
Chr1 exon 82579530 82579597 82579530 ID=MsG0180004773.01.T01:exon:8578;Parent=MsG0180004773.01.T01
Chr1 exon 82579726 82579855 82579726 ID=MsG0180004773.01.T01:exon:8577;Parent=MsG0180004773.01.T01
Chr1 exon 82580814 82580894 82580814 ID=MsG0180004773.01.T01:exon:8576;Parent=MsG0180004773.01.T01
Chr1 exon 82581013 82581072 82581013 ID=MsG0180004773.01.T01:exon:8575;Parent=MsG0180004773.01.T01
Chr1 exon 82581805 82581870 82581805 ID=MsG0180004773.01.T01:exon:8574;Parent=MsG0180004773.01.T01
Chr1 exon 82583449 82583535 82583449 ID=MsG0180004773.01.T01:exon:8573;Parent=MsG0180004773.01.T01
Chr1 exon 82583631 82583768 82583631 ID=MsG0180004773.01.T01:exon:8572;Parent=MsG0180004773.01.T01
Chr1 five_prime_UTR 82583703 82583768 82583703 ID=MsG0180004773.01.T01:five_prime_utr;Parent=MsG0180004773.01.T01
Chr1 CDS 82583631 82583702 82583631 ID=MsG0180004773.01.T01:cds;Parent=MsG0180004773.01.T01
Chr1 CDS 82583449 82583535 82583449 ID=MsG0180004773.01.T01:cds;Parent=MsG0180004773.01.T01
Chr1 CDS 82581805 82581870 82581805 ID=MsG0180004773.01.T01:cds;Parent=MsG0180004773.01.T01
Chr1 CDS 82581013 82581072 82581013 ID=MsG0180004773.01.T01:cds;Parent=MsG0180004773.01.T01
Chr1 CDS 82580814 82580894 82580814 ID=MsG0180004773.01.T01:cds;Parent=MsG0180004773.01.T01
Chr1 CDS 82579726 82579855 82579726 ID=MsG0180004773.01.T01:cds;Parent=MsG0180004773.01.T01
Chr1 CDS 82579530 82579597 82579530 ID=MsG0180004773.01.T01:cds;Parent=MsG0180004773.01.T01
Chr1 CDS 82579283 82579375 82579283 ID=MsG0180004773.01.T01:cds;Parent=MsG0180004773.01.T01
Chr1 CDS 82579059 82579168 82579059 ID=MsG0180004773.01.T01:cds;Parent=MsG0180004773.01.T01
Chr1 CDS 82578875 82578908 82578875 ID=MsG0180004773.01.T01:cds;Parent=MsG0180004773.01.T01
Chr1 CDS 82578546 82578713 82578546 ID=MsG0180004773.01.T01:cds;Parent=MsG0180004773.01.T01
Chr1 CDS 82578121 82578231 82578121 ID=MsG0180004773.01.T01:cds;Parent=MsG0180004773.01.T01
Chr1 CDS 82576964 82577059 82576964 ID=MsG0180004773.01.T01:cds;Parent=MsG0180004773.01.T01
Chr1 CDS 82576774 82576845 82576774 ID=MsG0180004773.01.T01:cds;Parent=MsG0180004773.01.T01
Chr1 CDS 82576569 82576629 82576569 ID=MsG0180004773.01.T01:cds;Parent=MsG0180004773.01.T01
Chr1 CDS 82576427 82576461 82576427 ID=MsG0180004773.01.T01:cds;Parent=MsG0180004773.01.T01
Chr1 CDS 82573753 82573980 82573753 ID=MsG0180004773.01.T01:cds;Parent=MsG0180004773.01.T01
Chr1 CDS 82573389 82573511 82573389 ID=MsG0180004773.01.T01:cds;Parent=MsG0180004773.01.T01
Chr1 three_prime_UTR 82572389 82573388 82572389 ID=MsG0180004773.01.T01:three_prime_utr;Parent=MsG0180004773.01.T01
Chr1 mRNA 82572291 82574240 82572291 ID=MsG0180004773.01.T02;Parent=MsG0180004773.01;Name=MsG0180004773.01.T02;_AED=0.45;_eAED=0.45;_QI=844|1|1|1|0|0|4|253|66
Chr1 exon 82572291 82572657 82572291 ID=MsG0180004773.01.T02:exon:8593;Parent=MsG0180004773.01.T02
Chr1 exon 82572884 82573207 82572884 ID=MsG0180004773.01.T02:exon:8592;Parent=MsG0180004773.01.T02
Chr1 exon 82573393 82573511 82573393 ID=MsG0180004773.01.T02:exon:8591;Parent=MsG0180004773.01.T02
Chr1 exon 82573753 82574240 82573753 ID=MsG0180004773.01.T02:exon:8590;Parent=MsG0180004773.01.T02
Chr1 five_prime_UTR 82573753 82574240 82573753 ID=MsG0180004773.01.T02:five_prime_utr;Parent=MsG0180004773.01.T02
Chr1 five_prime_UTR 82573393 82573511 82573393 ID=MsG0180004773.01.T02:five_prime_utr;Parent=MsG0180004773.01.T02
Chr1 five_prime_UTR 82572971 82573207 82572971 ID=MsG0180004773.01.T02:five_prime_utr;Parent=MsG0180004773.01.T02
Chr1 CDS 82572884 82572970 82572884 ID=MsG0180004773.01.T02:cds;Parent=MsG0180004773.01.T02
Chr1 CDS 82572544 82572657 82572544 ID=MsG0180004773.01.T02:cds;Parent=MsG0180004773.01.T02
Chr1 three_prime_UTR 82572291 82572543 82572291 ID=MsG0180004773.01.T02:three_prime_utr;Parent=MsG0180004773.01.T02
Gene Sequence

>MsG0180004773.01.T02

ATGGCAACTGGTACCTCTCCTTTTTCTTCTTTCAGGTTCCTTCACCTTTGGTACTATCCTCAAGCTAACATTGAAATCTTTGGCCAGGGACTCGTTACTTGGACACTCACTTGCTACTTTGTGTACACGCTCTTCTTAATTAATTTGTCACGGTGGTTCAGAACAGTTTATGTCGCTCAAACAGAGGAGTCTGATGCATAA

>MsG0180004773.01.T01

ATGGATGTGAAAAATATCCTTGGAGGATTACCCAATTTTTCCTTCCCACTTCAGGAGAAGAATTCTAGCGAGGTGTATGCACTTACTGGTGGATTTGCACCTCTTATGCCAGCAGTTGATTTGTCTCTGTTGAGAAAAAAGCCTCCTTCAGACAAAAAGGTCATTTGGCGATGGCTTCCTTTCAAAAATTCTGCTCGTAAAGATGATCTTCAGCTTCACCATTGGATTCAAATTGTAAATGGTGTTCCACCAACAGGGGACTATTCTTTTGCCAAGTATAACAAGTCTGTTGACATAACAAGATACACGGACGAGGAGTATGAGAAATATTTGGCAAATCCTGTAGGTATCATGTCTAGATTGCATAAATGGACCAAGGAGGAAACAGATCAACTGTTTGACTTGTGTGAGAGGTTTAATCTCCGATTTATTGTTATAGCTGATAGGTTCCCTTCATCTCGAACTGTTGAAGAATTGAAGGATCGATATTATAGTGTATCCCGGGCTATGTTAATTGCCAGGAATCCATCTTCTACGGATGTTGCAGTGGATCCACTTGTTCAGGAACCATATAACGTTTCACAGGAGATGGAGCGGAAACGAGCTCAGTCCCTGATCCTCTCTCAAACAAAGCAACAAGAGCGAAGAGATGAAGAGGTGCTTGCCGAAGCAAAAAGAATTGCTGAATTACGCATAACGACCAAGGTAATTTTTAATGGTTGTATTTGTATGACACTTATAATTACATGTGGAGAGGAAATGATAATGGGCCTGGGAATGAAATTAGAACTGTTTACTCATGTTGCCCGAGAGTCTGAGTTGGATGTTGCTTCAAAGGCTTGTGCAAACGTTACAGAGAGGGCCAACCCCGGTGAAACTGTATCTCCATCAAAGACAGAACTTCCACCAATAGTCGTGCCTTCCATGATATCGACAGATAATGCATCTACCATAGCCTCTCTTCGCATGCTTTATGTCTATTCAAGAACCTATGCACTTGGACAAATGGTGCAATCTGCAAGCTCATCAGCTGGACTTCGGACTATCAAACGTGTTGATCAAACTTTGCTGGAACTTGGGGTCAATTTGAAACCAAGGGTTCCAACAAAAGCTGTTTGTGCAGAGCATCTAGAACTAAGAAATGAAATACTAACCTTGCTGAATCTTCAGAAACAGCTGCAAAATAAGGAGGCTGAAGGTTCATCTTTTCGTGACGGGTCACACTGCGAAACAACGGGAACACCAAAGCGTTTGCATCGAGGCGGAGATCAGGATCTGACATTTGTTCCAGATAACACAAGTTCTGGGGGGGAAAGAATTGGTAAAAGGGATCAAAAGCGCAAGGCTTATAAACTCCACACAGTACGCAAACGGGGTCTGCTTAAGCCTCACCGTGCTGTCAATCAGCAGAGCCAAACTAGCGTTACAGCTTCATGGCCTCGTGTGTCACTTTCACTCTTCGGCACAGGATTCGTGTTTGGTCCACTTCTCGATGGACTCCATTCGAGAGTCGAACTCGTTTCGTACAAGTTCGGAGCAATTGACATTGGCCCACTCCATACAAACATCTGGGTTCCTCCCTTGCTGGGGTTGTTTTACTGCTCGATTGGTTTGCTTCAACTCTACCTTGATGAGAGGGTCTTAAACAAAGTTCAAGAGGGAAGTTTAACAAAAACAATATCCTCCCTGATGTAA

Protein sequence

>MsG0180004773.01.T02

MATGTSPFSSFRFLHLWYYPQANIEIFGQGLVTWTLTCYFVYTLFLINLSRWFRTVYVAQTEESDA*

>MsG0180004773.01.T01

MDVKNILGGLPNFSFPLQEKNSSEVYALTGGFAPLMPAVDLSLLRKKPPSDKKVIWRWLPFKNSARKDDLQLHHWIQIVNGVPPTGDYSFAKYNKSVDITRYTDEEYEKYLANPVGIMSRLHKWTKEETDQLFDLCERFNLRFIVIADRFPSSRTVEELKDRYYSVSRAMLIARNPSSTDVAVDPLVQEPYNVSQEMERKRAQSLILSQTKQQERRDEEVLAEAKRIAELRITTKVIFNGCICMTLIITCGEEMIMGLGMKLELFTHVARESELDVASKACANVTERANPGETVSPSKTELPPIVVPSMISTDNASTIASLRMLYVYSRTYALGQMVQSASSSAGLRTIKRVDQTLLELGVNLKPRVPTKAVCAEHLELRNEILTLLNLQKQLQNKEAEGSSFRDGSHCETTGTPKRLHRGGDQDLTFVPDNTSSGGERIGKRDQKRKAYKLHTVRKRGLLKPHRAVNQQSQTSVTASWPRVSLSLFGTGFVFGPLLDGLHSRVELVSYKFGAIDIGPLHTNIWVPPLLGLFYCSIGLLQLYLDERVLNKVQEGSLTKTISSLM*