AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480020748.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480020748.01.T01 MTR_6g024380 41.935 248 77 4 81 263 49 294 4.16e-47 163
MsG0480020748.01.T01 MTR_1g061220 43.333 210 80 7 81 262 2510 2708 9.14e-36 135
MsG0480020748.01.T01 MTR_7g083690 31.852 270 95 6 81 263 652 919 3.47e-31 122
MsG0480020748.01.T01 MTR_6g048840 41.566 166 59 3 84 216 208 368 1.81e-30 118
MsG0480020748.01.T01 MTR_6g016175 43.333 150 50 3 82 198 46 193 1.58e-28 114
MsG0480020748.01.T01 MTR_1g068728 50.000 130 53 4 79 198 46 173 5.54e-27 104
MsG0480020748.01.T01 MTR_6g033705 67.123 73 22 1 81 153 40 110 4.13e-25 100
MsG0480020748.01.T01 MTR_0032s0090 38.411 151 58 2 81 198 47 195 5.43e-24 97.1
MsG0480020748.01.T01 MTR_1g062670 38.125 160 60 3 76 198 69 226 2.58e-23 95.1
MsG0480020748.01.T01 MTR_8g058470 36.424 151 61 3 81 198 353 501 1.12e-22 97.4
MsG0480020748.01.T01 MTR_7g108760 36.424 151 61 3 81 198 355 503 1.21e-22 97.1
MsG0480020748.01.T01 MTR_2g105880 36.424 151 61 3 81 198 106 254 1.31e-22 95.1
MsG0480020748.01.T01 MTR_5g021380 38.514 148 58 1 84 198 553 700 7.52e-22 95.1
MsG0480020748.01.T01 MTR_3g448380 36.424 151 61 4 81 198 115 263 1.20e-21 91.7
MsG0480020748.01.T01 MTR_0426s0010 42.963 135 62 6 82 206 71 200 6.80e-21 89.4
MsG0480020748.01.T01 MTR_7g057470 37.086 151 50 3 81 198 258 396 6.84e-20 89.4
MsG0480020748.01.T01 MTR_7g057490 37.086 151 50 3 81 198 258 396 6.84e-20 89.4
MsG0480020748.01.T01 MTR_3g022950 37.324 142 54 2 82 190 683 822 7.63e-20 89.4
MsG0480020748.01.T01 MTR_7g451000 39.552 134 58 3 86 198 141 272 2.83e-18 83.6
MsG0480020748.01.T01 MTR_0938s0010 34.437 151 64 2 81 198 30 178 1.69e-17 80.5
MsG0480020748.01.T01 MTR_0062s0050 34.437 151 64 2 81 198 236 384 2.38e-17 81.6
MsG0480020748.01.T01 MTR_0062s0080 34.437 151 64 2 81 198 236 384 3.16e-17 81.3
MsG0480020748.01.T01 MTR_5g095550 54.545 66 28 1 81 146 267 330 2.47e-15 75.1
MsG0480020748.01.T01 MTR_3g026390 60.377 53 21 0 148 200 51 103 1.71e-14 69.7
MsG0480020748.01.T01 MTR_6g045623 44.444 90 42 3 117 198 117 206 2.31e-14 72.4
MsG0480020748.01.T01 MTR_6g048560 37.624 101 50 1 163 263 117 204 2.63e-14 70.9
MsG0480020748.01.T01 MTR_4g054200 39.831 118 38 2 81 198 170 254 9.39e-13 67.0
MsG0480020748.01.T01 MTR_7g103360 62.963 54 18 1 79 132 113 164 1.51e-11 64.3
MsG0480020748.01.T01 MTR_1g033770 47.826 69 34 1 82 150 247 313 3.51e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 71 sgRNAs with CRISPR-Local

Find 325 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAGATCTTTGATGTCATTT+AGG 0.156708 4:-47583418 None:intergenic
CTGTAAGGGCGTCGAGGGTT+GGG 0.232308 4:+47587170 MsG0480020748.01.T01:CDS
AAGATCTTTGATGTCATTTA+GGG 0.233880 4:-47583417 None:intergenic
CGCAGATACACGTGGTTTAA+AGG 0.243223 4:+47587537 MsG0480020748.01.T01:CDS
TGTAAGGGCGTCGAGGGTTG+GGG 0.255792 4:+47587171 MsG0480020748.01.T01:CDS
CATTTAGGGCATACAAATCT+AGG 0.293125 4:-47583403 None:intergenic
GGTGAAGTTTAAATTGATAA+AGG 0.308349 4:+47587821 MsG0480020748.01.T01:CDS
TCTGTAAGGGCGTCGAGGGT+TGG 0.308612 4:+47587169 MsG0480020748.01.T01:CDS
ACAGGATAACCGAGCCTTTA+GGG 0.311831 4:-47587901 None:intergenic
ATGGGGCAGCTTTGTTCTTA+AGG 0.312581 4:+47587800 MsG0480020748.01.T01:intron
TCTCCTTCCGTCCTTCTGTA+AGG 0.365987 4:+47587155 MsG0480020748.01.T01:CDS
ATTGATAAAGGCGGCTTTGA+AGG 0.378416 4:+47587833 MsG0480020748.01.T01:CDS
TTATTATCACAATGAAGCTT+AGG 0.393545 4:-47583521 None:intergenic
CACATTTCCTCTATTTCATC+AGG 0.393784 4:-47587957 None:intergenic
AACAGGATAACCGAGCCTTT+AGG 0.397791 4:-47587902 None:intergenic
TTCCCCTCTGCCATCTAAAC+AGG 0.398856 4:-47587919 None:intergenic
TCGGGGTGGTGTTGTTTCTC+AGG 0.403520 4:+47587452 MsG0480020748.01.T01:CDS
GTAAGGGCGTCGAGGGTTGG+GGG 0.411893 4:+47587172 MsG0480020748.01.T01:CDS
GCTCGGTTATCCTGTTTAGA+TGG 0.412427 4:+47587909 MsG0480020748.01.T01:CDS
TTTAGGGTGTCGAGCTTTGA+AGG 0.424433 4:-47587885 None:intergenic
TAGACACATGTGTTCTTTGT+GGG 0.435550 4:+47587114 MsG0480020748.01.T01:CDS
CTCCTTCCGTCCTTCTGTAA+GGG 0.442228 4:+47587156 MsG0480020748.01.T01:CDS
GGAGGAAATACGTTCGGCTC+GGG 0.448815 4:+47587434 MsG0480020748.01.T01:CDS
TATTATCACAATGAAGCTTA+GGG 0.458506 4:-47583520 None:intergenic
TTAGACACATGTGTTCTTTG+TGG 0.464886 4:+47587113 MsG0480020748.01.T01:CDS
AACTTTAACACCTGGTGGAT+CGG 0.470033 4:+47583448 MsG0480020748.01.T01:CDS
TTGATAGATTTATCGTTATG+TGG 0.472684 4:+47587513 MsG0480020748.01.T01:CDS
CTTAATAAAACTTTAACACC+TGG 0.479447 4:+47583440 MsG0480020748.01.T01:CDS
TCCTTCTGTAAGGGCGTCGA+GGG 0.492382 4:+47587165 MsG0480020748.01.T01:CDS
TAAGGGCGTCGAGGGTTGGG+GGG 0.505896 4:+47587173 MsG0480020748.01.T01:CDS
GTGATGGTATTTCAATGAGC+AGG 0.518059 4:+47587559 MsG0480020748.01.T01:CDS
TCTGCTTCAATACCACCAAC+AGG 0.519484 4:+47583573 MsG0480020748.01.T01:CDS
GAGGAAATACGTTCGGCTCG+GGG 0.548527 4:+47587435 MsG0480020748.01.T01:CDS
AATAAAACTTTAACACCTGG+TGG 0.549310 4:+47583443 MsG0480020748.01.T01:CDS
AGCTCGACACCCTAAAGGCT+CGG 0.552336 4:+47587892 MsG0480020748.01.T01:CDS
AAATGCGGAGGAAATACGTT+CGG 0.555464 4:+47587428 MsG0480020748.01.T01:CDS
GTTGTCTCCTGATGAAATAG+AGG 0.555705 4:+47587950 MsG0480020748.01.T01:CDS
CGCCCTTACAGAAGGACGGA+AGG 0.557938 4:-47587158 None:intergenic
TTCAAAGCTCGACACCCTAA+AGG 0.558074 4:+47587887 MsG0480020748.01.T01:CDS
TACACGTGGTTTAAAGGTGA+TGG 0.565904 4:+47587543 MsG0480020748.01.T01:CDS
ATGAAGCTTAGGGTTAGATC+CGG 0.566541 4:-47583510 None:intergenic
CGGAGGAAATACGTTCGGCT+CGG 0.572211 4:+47587433 MsG0480020748.01.T01:CDS
ATTTAGGGCATACAAATCTA+GGG 0.575925 4:-47583402 None:intergenic
TATCCTGTTTAGATGGCAGA+GGG 0.576275 4:+47587916 MsG0480020748.01.T01:CDS
GTCCTTCTGTAAGGGCGTCG+AGG 0.576502 4:+47587164 MsG0480020748.01.T01:CDS
TAAAGGCGGCTTTGAAGGAG+TGG 0.582027 4:+47587838 MsG0480020748.01.T01:CDS
TCATGGAAGGTTTATCAAGA+CGG 0.583711 4:+47587267 MsG0480020748.01.T01:CDS
TTATCCTGTTTAGATGGCAG+AGG 0.584482 4:+47587915 MsG0480020748.01.T01:CDS
GCTTTCGTCGCCGATCCACC+AGG 0.584621 4:-47583458 None:intergenic
ATCGAGAGTGCTATAAACTT+AGG 0.588616 4:+47583485 MsG0480020748.01.T01:CDS
AAGGTTTATCAAGACGGATG+AGG 0.596222 4:+47587273 MsG0480020748.01.T01:CDS
AGACACATGTGTTCTTTGTG+GGG 0.598857 4:+47587115 MsG0480020748.01.T01:CDS
ACCCTCGACGCCCTTACAGA+AGG 0.599970 4:-47587166 None:intergenic
TTAGGGTGTCGAGCTTTGAA+GGG 0.604747 4:-47587884 None:intergenic
AATGAAGAGGTTAAACGAAG+TGG 0.607072 4:-47587478 None:intergenic
TAATGCAGTCAGAAATGCGG+AGG 0.608036 4:+47587416 MsG0480020748.01.T01:intron
GAAGTTTAAATTGATAAAGG+CGG 0.612156 4:+47587824 MsG0480020748.01.T01:CDS
ACAACTTATATACCTGTTGG+TGG 0.612648 4:-47583585 None:intergenic
GAAATACGTTCGGCTCGGGG+TGG 0.617481 4:+47587438 MsG0480020748.01.T01:CDS
AGTGCTATAAACTTAGGCAC+CGG 0.617633 4:+47583491 MsG0480020748.01.T01:CDS
AAGTGTGGTCTACAGTTAGT+CGG 0.626233 4:+47587227 MsG0480020748.01.T01:CDS
GACAGTGTGGGATAGTTCTG+AGG 0.629439 4:+47587201 MsG0480020748.01.T01:CDS
GCAAGCTTGAAGTAATCGAA+TGG 0.652108 4:-47583380 None:intergenic
ATAGTTCTGAGGTGGAAGTG+TGG 0.654326 4:+47587212 MsG0480020748.01.T01:CDS
AGCTTGAAGTAATCGAATGG+TGG 0.656716 4:-47583377 None:intergenic
TCGACGCCCTTACAGAAGGA+CGG 0.670983 4:-47587162 None:intergenic
AGTGTGGGATAGTTCTGAGG+TGG 0.681580 4:+47587204 MsG0480020748.01.T01:CDS
TATGTGGTCGCAGATACACG+TGG 0.709129 4:+47587529 MsG0480020748.01.T01:CDS
TAAGTTTATAGCACTCTCGA+TGG 0.713022 4:-47583483 None:intergenic
ATCCTGTTTAGATGGCAGAG+GGG 0.742781 4:+47587917 MsG0480020748.01.T01:CDS
GATGAAATAGAGGAAATGTG+TGG 0.748505 4:+47587960 MsG0480020748.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATTAATCAATAAGAAT+TGG + Chr4:47586358-47586377 MsG0480020748.01.T01:intron 10.0%
!! AACTGAAATTATAAAATTTA+AGG - Chr4:47586912-47586931 None:intergenic 10.0%
!! ATATCTTCAAAAAAATTATT+TGG + Chr4:47583826-47583845 MsG0480020748.01.T01:intron 10.0%
!! ATCAATTAAATTAAGAATTA+AGG + Chr4:47585813-47585832 MsG0480020748.01.T01:intron 10.0%
!! GTTAATAAAATTATATATGA+TGG + Chr4:47583666-47583685 MsG0480020748.01.T01:intron 10.0%
!! TATATTTGATTAAAACTAAT+TGG + Chr4:47586308-47586327 MsG0480020748.01.T01:intron 10.0%
!! TCAATTAAATTAAGAATTAA+GGG + Chr4:47585814-47585833 MsG0480020748.01.T01:intron 10.0%
!!! AAATTGAACTAATTTTTTAA+AGG + Chr4:47586714-47586733 MsG0480020748.01.T01:intron 10.0%
!!! ATAAAATTTAAGGTAATATT+TGG - Chr4:47586902-47586921 None:intergenic 10.0%
!!! ATATGTTTTCTAAATAAATA+TGG + Chr4:47583750-47583769 MsG0480020748.01.T01:intron 10.0%
!!! TAAAATTTAAGGTAATATTT+GGG - Chr4:47586901-47586920 None:intergenic 10.0%
!!! TAGAAATTTTTTAAAATTGA+AGG + Chr4:47587777-47587796 MsG0480020748.01.T01:intron 10.0%
!!! TATTGATTTTTCAAATTAAT+TGG - Chr4:47586470-47586489 None:intergenic 10.0%
!!! TCTAAAATAAAACTAAAAAA+GGG + Chr4:47584386-47584405 MsG0480020748.01.T01:intron 10.0%
!!! TTTTTTTATCTTTTTTTGAT+TGG + Chr4:47586404-47586423 MsG0480020748.01.T01:intron 10.0%
!! AACAAAATATAAATGCAAAT+TGG + Chr4:47586660-47586679 MsG0480020748.01.T01:intron 15.0%
!! ATAAAATTATATATGATGGT+TGG + Chr4:47583670-47583689 MsG0480020748.01.T01:intron 15.0%
!! ATCAATATTACATTTATCTA+AGG + Chr4:47586483-47586502 MsG0480020748.01.T01:intron 15.0%
!! CTAAAATAAAACTAAAAAAG+GGG + Chr4:47584387-47584406 MsG0480020748.01.T01:intron 15.0%
!! TAAAATAAAACTAAAAAAGG+GGG + Chr4:47584388-47584407 MsG0480020748.01.T01:intron 15.0%
!! TAGAAGTAACATTAATAATT+TGG - Chr4:47585472-47585491 None:intergenic 15.0%
!! TATTCAAGTATTACATAAAA+TGG - Chr4:47583809-47583828 None:intergenic 15.0%
!! TTCTACAATTGAATTTATTT+AGG + Chr4:47584302-47584321 MsG0480020748.01.T01:intron 15.0%
!! TTTATGAATTAGATCTAATA+TGG + Chr4:47585041-47585060 MsG0480020748.01.T01:intron 15.0%
!!! AATTTTTTAAAATTGAAGGA+TGG + Chr4:47587781-47587800 MsG0480020748.01.T01:intron 15.0%
!!! ATTTTTTAAAATTGAAGGAT+GGG + Chr4:47587782-47587801 MsG0480020748.01.T01:intron 15.0%
!!! CTCTAAAATAAAACTAAAAA+AGG + Chr4:47584385-47584404 MsG0480020748.01.T01:intron 15.0%
!!! GAATTTATTTAGGATATAAA+GGG + Chr4:47584312-47584331 MsG0480020748.01.T01:intron 15.0%
!!! TAACTTTATTTAATAACTTC+TGG - Chr4:47583650-47583669 None:intergenic 15.0%
!!! TATTAATGTTACTTCTAAAT+TGG + Chr4:47585475-47585494 MsG0480020748.01.T01:intron 15.0%
!!! TATTTTATCAAAACTTATCA+TGG - Chr4:47585077-47585096 None:intergenic 15.0%
!!! TATTTTTAGTGTTAAAATTG+TGG - Chr4:47586008-47586027 None:intergenic 15.0%
!!! TCAAAGTTAAGAATTTTTTA+TGG - Chr4:47585599-47585618 None:intergenic 15.0%
!!! TGAATTTATTTAGGATATAA+AGG + Chr4:47584311-47584330 MsG0480020748.01.T01:intron 15.0%
!! AAAAAATTCTTAACTTTGAG+AGG + Chr4:47585600-47585619 MsG0480020748.01.T01:intron 20.0%
!! AAAAATTATTGTCACATATG+AGG - Chr4:47585170-47585189 None:intergenic 20.0%
!! AAAATAATCTAATCTAACAG+TGG + Chr4:47585091-47585110 MsG0480020748.01.T01:intron 20.0%
!! AATTAGATCTAATATGGTAT+GGG + Chr4:47585047-47585066 MsG0480020748.01.T01:intron 20.0%
!! ACTTATCATTAAGAATAACA+TGG - Chr4:47584688-47584707 None:intergenic 20.0%
!! AGATTTGTAAATTTAGAAGA+AGG + Chr4:47584492-47584511 MsG0480020748.01.T01:intron 20.0%
!! ATTCTGATATATATCATATG+TGG + Chr4:47584047-47584066 MsG0480020748.01.T01:intron 20.0%
!! GAATTTAATATGCAAGTTAA+AGG - Chr4:47585628-47585647 None:intergenic 20.0%
!! GTTGAAAGAAGAAAAAAAAA+TGG - Chr4:47584661-47584680 None:intergenic 20.0%
!! TAAAAACTCTAGTAATTTGA+TGG + Chr4:47583541-47583560 MsG0480020748.01.T01:CDS 20.0%
!! TGAAGTTGAAAGAAAAAAAA+TGG - Chr4:47584597-47584616 None:intergenic 20.0%
!! TGGAAAAAATACAAAACAAA+GGG + Chr4:47584432-47584451 MsG0480020748.01.T01:intron 20.0%
!! TTATCTAACACATAAATTGT+TGG + Chr4:47586541-47586560 MsG0480020748.01.T01:intron 20.0%
!! TTCTGATATATATCATATGT+GGG + Chr4:47584048-47584067 MsG0480020748.01.T01:intron 20.0%
!!! AACTTAATTCTAGAATAACA+TGG - Chr4:47584620-47584639 None:intergenic 20.0%
!!! ACAAATTTTAGATATGATTG+AGG - Chr4:47586234-47586253 None:intergenic 20.0%
!!! ATGTGACAATAATTTTTCAA+AGG + Chr4:47585173-47585192 MsG0480020748.01.T01:intron 20.0%
!!! CAAAATAAGAGAATATGTTT+TGG - Chr4:47584176-47584195 None:intergenic 20.0%
!!! GATTCATATATTTTCTATTG+TGG - Chr4:47584352-47584371 None:intergenic 20.0%
!!! TAGAAAATTTTCGTCTAAAA+AGG + Chr4:47586595-47586614 MsG0480020748.01.T01:intron 20.0%
!!! TGTTTTCTAAATAAATATGG+AGG + Chr4:47583753-47583772 MsG0480020748.01.T01:intron 20.0%
!!! TTTTCAAATTAATTGGTCTT+TGG - Chr4:47586463-47586482 None:intergenic 20.0%
!!! TTTTCTTTTTTTAGGTGAAT+AGG + Chr4:47585441-47585460 MsG0480020748.01.T01:intron 20.0%
!!! TTTTTTAAAATTGAAGGATG+GGG + Chr4:47587783-47587802 MsG0480020748.01.T01:intron 20.0%
! AAATGGACCTGTTAAAATAT+CGG - Chr4:47585138-47585157 None:intergenic 25.0%
! AAGACACCGATAAAAAAAAT+GGG + Chr4:47584886-47584905 MsG0480020748.01.T01:intron 25.0%
! ACTTGCATATTAAATTCCAT+CGG + Chr4:47585631-47585650 MsG0480020748.01.T01:intron 25.0%
! ATAATCCAAGTTATGTTTGA+CGG - Chr4:47586033-47586052 None:intergenic 25.0%
! ATAGAATCACACTAAAAATC+TGG + Chr4:47584412-47584431 MsG0480020748.01.T01:intron 25.0%
! ATATATATCCATGCAAATTG+TGG - Chr4:47584795-47584814 None:intergenic 25.0%
! ATATGAGGTTCTGTATAAAA+TGG - Chr4:47585155-47585174 None:intergenic 25.0%
! CATTTCTTGTGTGTTATATT+TGG - Chr4:47585377-47585396 None:intergenic 25.0%
! CTCAAATATCATATTAGTCA+TGG + Chr4:47585897-47585916 MsG0480020748.01.T01:intron 25.0%
! CTCATCACATAAATTATAAG+AGG + Chr4:47586148-47586167 MsG0480020748.01.T01:intron 25.0%
! CTGGAAAAAATACAAAACAA+AGG + Chr4:47584431-47584450 MsG0480020748.01.T01:intron 25.0%
! CTTAATAAAACTTTAACACC+TGG + Chr4:47583440-47583459 MsG0480020748.01.T01:CDS 25.0%
! GAAGTTTAAATTGATAAAGG+CGG + Chr4:47587824-47587843 MsG0480020748.01.T01:CDS 25.0%
! GAATTAGATCTAATATGGTA+TGG + Chr4:47585046-47585065 MsG0480020748.01.T01:intron 25.0%
! GGTGAAGTTTAAATTGATAA+AGG + Chr4:47587821-47587840 MsG0480020748.01.T01:CDS 25.0%
! GTTAGCATTTCAGATTTATT+TGG + Chr4:47585275-47585294 MsG0480020748.01.T01:intron 25.0%
! TATATAAGTTGTCCTAATAC+TGG + Chr4:47583596-47583615 MsG0480020748.01.T01:intron 25.0%
! TATATGACACATATGTAGTT+TGG - Chr4:47585217-47585236 None:intergenic 25.0%
! TATTATCACAATGAAGCTTA+GGG - Chr4:47583523-47583542 None:intergenic 25.0%
! TCATAAATAAGTACAAGTGT+GGG - Chr4:47585250-47585269 None:intergenic 25.0%
! TTATTATCACAATGAAGCTT+AGG - Chr4:47583524-47583543 None:intergenic 25.0%
! TTGATAGATTTATCGTTATG+TGG + Chr4:47587513-47587532 MsG0480020748.01.T01:CDS 25.0%
! TTGTGAGATTGATTAACAAT+TGG + Chr4:47586269-47586288 MsG0480020748.01.T01:intron 25.0%
!! AAGAACTAATATCCCATTTT+AGG - Chr4:47585954-47585973 None:intergenic 25.0%
!! AAGATCTTTGATGTCATTTA+GGG - Chr4:47583420-47583439 None:intergenic 25.0%
!! AATGTTACTTCTAAATTGGT+CGG + Chr4:47585479-47585498 MsG0480020748.01.T01:intron 25.0%
!! ACATATTTTCATCAATGAAG+AGG - Chr4:47587494-47587513 None:intergenic 25.0%
!! GATTTTATTGGGTTTAGTAT+TGG - Chr4:47586058-47586077 None:intergenic 25.0%
!!! AATGACCCCATTTTTTTTAT+CGG - Chr4:47584895-47584914 None:intergenic 25.0%
!!! ATTGTGTGATTTTATTGACT+AGG - Chr4:47585860-47585879 None:intergenic 25.0%
!!! GAACTAATTTTTTAAAGGCA+GGG + Chr4:47586719-47586738 MsG0480020748.01.T01:intron 25.0%
!!! TGAACTAATTTTTTAAAGGC+AGG + Chr4:47586718-47586737 MsG0480020748.01.T01:intron 25.0%
!!! TGGTTGTTTTTCTAAATCAT+TGG + Chr4:47586328-47586347 MsG0480020748.01.T01:intron 25.0%
!!! TGTTTTTGAATTAAACTTCC+AGG - Chr4:47586430-47586449 None:intergenic 25.0%
!!! TTCCTAACACTGATTTTATT+GGG - Chr4:47586069-47586088 None:intergenic 25.0%
!!! TTTCCTAACACTGATTTTAT+TGG - Chr4:47586070-47586089 None:intergenic 25.0%
!!! TTTTATTGACTAGGATTTGA+AGG - Chr4:47585851-47585870 None:intergenic 25.0%
AAAGATAAGCTAATCTGGAA+AGG - Chr4:47585742-47585761 None:intergenic 30.0%
AACCCAATAAAATCAGTGTT+AGG + Chr4:47586064-47586083 MsG0480020748.01.T01:intron 30.0%
AAGATAAGCTAATCTGGAAA+GGG - Chr4:47585741-47585760 None:intergenic 30.0%
AATAAAACTTTAACACCTGG+TGG + Chr4:47583443-47583462 MsG0480020748.01.T01:CDS 30.0%
AGAACAATTTGGAGACAATT+AGG - Chr4:47587627-47587646 None:intergenic 30.0%
AGAATGGACCAATACTTATA+AGG - Chr4:47584091-47584110 None:intergenic 30.0%
AGACACCGATAAAAAAAATG+GGG + Chr4:47584887-47584906 MsG0480020748.01.T01:intron 30.0%
ATATTAAATTCCATCGGTCT+GGG + Chr4:47585637-47585656 MsG0480020748.01.T01:intron 30.0%
ATTCTTCTGATAACAAGAAC+CGG - Chr4:47587590-47587609 None:intergenic 30.0%
ATTTATCTCCACAATTTGCA+TGG + Chr4:47584784-47584803 MsG0480020748.01.T01:intron 30.0%
CAAAGAGATGGAACAAAAAA+GGG + Chr4:47584934-47584953 MsG0480020748.01.T01:intron 30.0%
CAATTTCAGACACACATATA+CGG + Chr4:47585681-47585700 MsG0480020748.01.T01:intron 30.0%
CTAAATAAATATGGAGGAGA+CGG + Chr4:47583759-47583778 MsG0480020748.01.T01:intron 30.0%
CTCATAAATAAGTACAAGTG+TGG - Chr4:47585251-47585270 None:intergenic 30.0%
CTCTGTGAATTGTTTGATAA+TGG - Chr4:47584852-47584871 None:intergenic 30.0%
GAAGACACCGATAAAAAAAA+TGG + Chr4:47584885-47584904 MsG0480020748.01.T01:intron 30.0%
GAATGGACCAATACTTATAA+GGG - Chr4:47584090-47584109 None:intergenic 30.0%
GAGAAACAATAAGCATTATG+TGG + Chr4:47586110-47586129 MsG0480020748.01.T01:intron 30.0%
GTTGGTTATTACTATTGTGT+GGG + Chr4:47583688-47583707 MsG0480020748.01.T01:intron 30.0%
TATCATATTAGTCATGGACA+AGG + Chr4:47585903-47585922 MsG0480020748.01.T01:intron 30.0%
TCAGAATTCTGTGTGATATA+TGG - Chr4:47584034-47584053 None:intergenic 30.0%
TGATGTCTTCACTTGTAAAA+TGG - Chr4:47586858-47586877 None:intergenic 30.0%
TTACGAAAGATAAGCTAATC+TGG - Chr4:47585747-47585766 None:intergenic 30.0%
TTCGTAACAAGATGTTGTAT+GGG + Chr4:47585760-47585779 MsG0480020748.01.T01:intron 30.0%
TTTCATGCAATTACTTCTCA+AGG + Chr4:47585401-47585420 MsG0480020748.01.T01:intron 30.0%
TTTCGTAACAAGATGTTGTA+TGG + Chr4:47585759-47585778 MsG0480020748.01.T01:intron 30.0%
TTTGATCATGAGAATGAAAC+TGG - Chr4:47585540-47585559 None:intergenic 30.0%
! AGGTTGAATTTTTATGTTGC+TGG - Chr4:47584231-47584250 None:intergenic 30.0%
! ATTTAGGGCATACAAATCTA+GGG - Chr4:47583405-47583424 None:intergenic 30.0%
! ATTTCAACGTTGTTTGTTGA+AGG - Chr4:47584283-47584302 None:intergenic 30.0%
! GAAGATCTTTGATGTCATTT+AGG - Chr4:47583421-47583440 None:intergenic 30.0%
! TATTGTTTCTCGTCTGTTTA+AGG - Chr4:47586101-47586120 None:intergenic 30.0%
! TCTTTTCCAAAGACTTTACA+TGG - Chr4:47586821-47586840 None:intergenic 30.0%
! TTCTTGAACAGACTTTTGTA+CGG - Chr4:47586793-47586812 None:intergenic 30.0%
! TTGATAGCAAAATCAATCCA+TGG + Chr4:47584728-47584747 MsG0480020748.01.T01:intron 30.0%
! TTTTAATGCAGTCAGAAATG+CGG + Chr4:47587413-47587432 MsG0480020748.01.T01:intron 30.0%
! TTTTTATGTTGCTGGAAAAC+AGG - Chr4:47584223-47584242 None:intergenic 30.0%
!! AACTTTGCACTAGCTTTAAT+TGG - Chr4:47586515-47586534 None:intergenic 30.0%
!! ATGTTCTTTTGATTCATGGA+AGG + Chr4:47587254-47587273 MsG0480020748.01.T01:CDS 30.0%
!! CAACATGTTCTTTTGATTCA+TGG + Chr4:47587250-47587269 MsG0480020748.01.T01:CDS 30.0%
!! GTTTGATAATGGTTTCTTGA+AGG - Chr4:47584841-47584860 None:intergenic 30.0%
!! TAATTTAGCGTTGAGTCTTT+TGG + Chr4:47583849-47583868 MsG0480020748.01.T01:intron 30.0%
!! TTATAAGTATTGGTCCATTC+TGG + Chr4:47584090-47584109 MsG0480020748.01.T01:intron 30.0%
!!! AGGTTTTGTTAGCTATTTCA+TGG - Chr4:47584821-47584840 None:intergenic 30.0%
!!! GATTATTTTTAGAGCAACCA+CGG + Chr4:47585565-47585584 MsG0480020748.01.T01:intron 30.0%
!!! TTATCTTTTTTTGATTGGCC+TGG + Chr4:47586409-47586428 MsG0480020748.01.T01:intron 30.0%
!!! TTTTTTGTTCCATCTCTTTG+CGG - Chr4:47584934-47584953 None:intergenic 30.0%
AAAAAGAAACCGCAAAGAGA+TGG + Chr4:47584922-47584941 MsG0480020748.01.T01:intron 35.0%
AACATGCCATGTAAAGTCTT+TGG + Chr4:47586812-47586831 MsG0480020748.01.T01:intron 35.0%
AAGTAGCTAGATATGCATTG+AGG - Chr4:47584545-47584564 None:intergenic 35.0%
AATCAATCCATGGTTGAGAT+TGG + Chr4:47584738-47584757 MsG0480020748.01.T01:intron 35.0%
AATCTAACAGTGGACAAAAG+TGG + Chr4:47585101-47585120 MsG0480020748.01.T01:intron 35.0%
AATGAAGAGGTTAAACGAAG+TGG - Chr4:47587481-47587500 None:intergenic 35.0%
ACAACTTATATACCTGTTGG+TGG - Chr4:47583588-47583607 None:intergenic 35.0%
ACAGAGTGAAACAAGATTTG+TGG + Chr4:47587332-47587351 MsG0480020748.01.T01:intron 35.0%
AGATAAGCTAATCTGGAAAG+GGG - Chr4:47585740-47585759 None:intergenic 35.0%
AGGACAACTTATATACCTGT+TGG - Chr4:47583591-47583610 None:intergenic 35.0%
ATACTCCGTCAAACATAACT+TGG + Chr4:47586025-47586044 MsG0480020748.01.T01:intron 35.0%
ATGTAGTTTGGTCATTTGAG+AGG - Chr4:47585205-47585224 None:intergenic 35.0%
CAACTAAATAGGACAATGGT+CGG - Chr4:47587664-47587683 None:intergenic 35.0%
CACATTTCCTCTATTTCATC+AGG - Chr4:47587960-47587979 None:intergenic 35.0%
CAGAAGAATGGTGTTTGAAT+TGG + Chr4:47587601-47587620 MsG0480020748.01.T01:intron 35.0%
CAGAGTGAAACAAGATTTGT+GGG + Chr4:47587333-47587352 MsG0480020748.01.T01:intron 35.0%
CATATTAAATTCCATCGGTC+TGG + Chr4:47585636-47585655 MsG0480020748.01.T01:intron 35.0%
CCACAATTTGTACCAGTATT+AGG - Chr4:47583611-47583630 None:intergenic 35.0%
CCTAATACTGGTACAAATTG+TGG + Chr4:47583608-47583627 MsG0480020748.01.T01:intron 35.0%
GAGAGAGAATACAAATGAGA+GGG - Chr4:47584199-47584218 None:intergenic 35.0%
GATGAAATAGAGGAAATGTG+TGG + Chr4:47587960-47587979 MsG0480020748.01.T01:CDS 35.0%
GCAAAGAGATGGAACAAAAA+AGG + Chr4:47584933-47584952 MsG0480020748.01.T01:intron 35.0%
GTTATATTTGGACCAGGATT+TGG - Chr4:47585365-47585384 None:intergenic 35.0%
GTTTATGTGTTCTTCGTTGT+GGG + Chr4:47586971-47586990 MsG0480020748.01.T01:intron 35.0%
TAAGTTTATAGCACTCTCGA+TGG - Chr4:47583486-47583505 None:intergenic 35.0%
TAGACACATGTGTTCTTTGT+GGG + Chr4:47587114-47587133 MsG0480020748.01.T01:CDS 35.0%
TATTTAGTTGTCCGTTGATG+AGG + Chr4:47587674-47587693 MsG0480020748.01.T01:intron 35.0%
TCAGTCGTCTGATCTTTAAT+CGG - Chr4:47585330-47585349 None:intergenic 35.0%
TCATCAACGGACAACTAAAT+AGG - Chr4:47587675-47587694 None:intergenic 35.0%
TCATGGAAGGTTTATCAAGA+CGG + Chr4:47587267-47587286 MsG0480020748.01.T01:CDS 35.0%
TGAGAGAGAATACAAATGAG+AGG - Chr4:47584200-47584219 None:intergenic 35.0%
TGTAGTTTGGTCATTTGAGA+GGG - Chr4:47585204-47585223 None:intergenic 35.0%
TGTTTATGTGTTCTTCGTTG+TGG + Chr4:47586970-47586989 MsG0480020748.01.T01:intron 35.0%
TTAAGGATTACTTGTGCAGT+GGG + Chr4:47585787-47585806 MsG0480020748.01.T01:intron 35.0%
TTAGACACATGTGTTCTTTG+TGG + Chr4:47587113-47587132 MsG0480020748.01.T01:CDS 35.0%
TTGACTAGGATTTGAAGGTT+TGG - Chr4:47585846-47585865 None:intergenic 35.0%
TTGTGTGTTATATTTGGACC+AGG - Chr4:47585371-47585390 None:intergenic 35.0%
TTTATGTGTTCTTCGTTGTG+GGG + Chr4:47586972-47586991 MsG0480020748.01.T01:intron 35.0%
! CATTTAGGGCATACAAATCT+AGG - Chr4:47583406-47583425 None:intergenic 35.0%
! GATATTTGAGCTTTTGTTGC+AGG - Chr4:47585887-47585906 None:intergenic 35.0%
! GGTTCTTGTTATCAGAAGAA+TGG + Chr4:47587589-47587608 MsG0480020748.01.T01:intron 35.0%
! GGTTGGTTATTACTATTGTG+TGG + Chr4:47583687-47583706 MsG0480020748.01.T01:intron 35.0%
!! ATCGAGAGTGCTATAAACTT+AGG + Chr4:47583485-47583504 MsG0480020748.01.T01:CDS 35.0%
!!! ACATGGACCGATATTTTAAC+AGG + Chr4:47585128-47585147 MsG0480020748.01.T01:intron 35.0%
AAAAGGGAACAAAAGCTTCC+TGG + Chr4:47584950-47584969 MsG0480020748.01.T01:intron 40.0%
AAAGGGAACAAAAGCTTCCT+GGG + Chr4:47584951-47584970 MsG0480020748.01.T01:intron 40.0%
AAATGCGGAGGAAATACGTT+CGG + Chr4:47587428-47587447 MsG0480020748.01.T01:CDS 40.0%
AAGATCTCCAATCTCAACCA+TGG - Chr4:47584748-47584767 None:intergenic 40.0%
AAGCCAAGGAACACCTAAAA+TGG + Chr4:47585938-47585957 MsG0480020748.01.T01:intron 40.0%
AAGGTTTATCAAGACGGATG+AGG + Chr4:47587273-47587292 MsG0480020748.01.T01:CDS 40.0%
AAGTGTGGTCTACAGTTAGT+CGG + Chr4:47587227-47587246 MsG0480020748.01.T01:CDS 40.0%
AATAAATATGGAGGAGACGG+AGG + Chr4:47583762-47583781 MsG0480020748.01.T01:intron 40.0%
ACCAATACTTATAAGGGTCC+AGG - Chr4:47584084-47584103 None:intergenic 40.0%
AGACACATGTGTTCTTTGTG+GGG + Chr4:47587115-47587134 MsG0480020748.01.T01:CDS 40.0%
AGAGAGAGAGAGTAATGAGA+TGG + Chr4:47585007-47585026 MsG0480020748.01.T01:intron 40.0%
AGCCAAGGAACACCTAAAAT+GGG + Chr4:47585939-47585958 MsG0480020748.01.T01:intron 40.0%
AGCTTGAAGTAATCGAATGG+TGG - Chr4:47583380-47583399 None:intergenic 40.0%
AGTAATGAGATGGGAGACAT+AGG + Chr4:47585017-47585036 MsG0480020748.01.T01:intron 40.0%
AGTGCTATAAACTTAGGCAC+CGG + Chr4:47583491-47583510 MsG0480020748.01.T01:CDS 40.0%
ATAAATATGGAGGAGACGGA+GGG + Chr4:47583763-47583782 MsG0480020748.01.T01:intron 40.0%
ATGAAGCTTAGGGTTAGATC+CGG - Chr4:47583513-47583532 None:intergenic 40.0%
ATTACTATTGTGTGGGTGCA+TGG + Chr4:47583695-47583714 MsG0480020748.01.T01:intron 40.0%
ATTGGTCCATTCTGGACAAA+TGG + Chr4:47584098-47584117 MsG0480020748.01.T01:intron 40.0%
CGGACAACTAAATAGGACAA+TGG - Chr4:47587668-47587687 None:intergenic 40.0%
CTCCAAATTGTTCTTCTTCG+TGG + Chr4:47587633-47587652 MsG0480020748.01.T01:intron 40.0%
CTCCACGAAGAAGAACAATT+TGG - Chr4:47587638-47587657 None:intergenic 40.0%
GAGAGAGAGAGTAATGAGAT+GGG + Chr4:47585008-47585027 MsG0480020748.01.T01:intron 40.0%
GATGTTGTATGGGTGTGTTA+AGG + Chr4:47585770-47585789 MsG0480020748.01.T01:intron 40.0%
GCAAGCTTGAAGTAATCGAA+TGG - Chr4:47583383-47583402 None:intergenic 40.0%
GGACAAATGGTGAGAATCAT+TGG + Chr4:47584111-47584130 MsG0480020748.01.T01:intron 40.0%
GGACAAATGTCTTTAAGCCA+AGG + Chr4:47585924-47585943 MsG0480020748.01.T01:intron 40.0%
GTAATGAGATGGGAGACATA+GGG + Chr4:47585018-47585037 MsG0480020748.01.T01:intron 40.0%
GTCAGAATGTTTGTGTGTGT+GGG + Chr4:47587388-47587407 MsG0480020748.01.T01:intron 40.0%
GTGATGGTATTTCAATGAGC+AGG + Chr4:47587559-47587578 MsG0480020748.01.T01:CDS 40.0%
GTTAAGGATTACTTGTGCAG+TGG + Chr4:47585786-47585805 MsG0480020748.01.T01:intron 40.0%
GTTGTCTCCTGATGAAATAG+AGG + Chr4:47587950-47587969 MsG0480020748.01.T01:CDS 40.0%
TACACGTGGTTTAAAGGTGA+TGG + Chr4:47587543-47587562 MsG0480020748.01.T01:CDS 40.0%
TATCCTGTTTAGATGGCAGA+GGG + Chr4:47587916-47587935 MsG0480020748.01.T01:CDS 40.0%
TATGCGTGTGAACGTAACAA+CGG - Chr4:47586635-47586654 None:intergenic 40.0%
TCAGAATGTTTGTGTGTGTG+GGG + Chr4:47587389-47587408 MsG0480020748.01.T01:intron 40.0%
TGGACAAAAGTGGTCTAACA+TGG + Chr4:47585111-47585130 MsG0480020748.01.T01:intron 40.0%
TGTTTCACTCTGTTGTCACA+GGG - Chr4:47587325-47587344 None:intergenic 40.0%
TTATAAGGGTCCAGGCTAAA+TGG - Chr4:47584076-47584095 None:intergenic 40.0%
TTATCCTGTTTAGATGGCAG+AGG + Chr4:47587915-47587934 MsG0480020748.01.T01:CDS 40.0%
TTCAACCTTCTGCTTATGTG+TGG + Chr4:47584243-47584262 MsG0480020748.01.T01:intron 40.0%
TTCTCACCATTTGTCCAGAA+TGG - Chr4:47584107-47584126 None:intergenic 40.0%
TTGTTTCACTCTGTTGTCAC+AGG - Chr4:47587326-47587345 None:intergenic 40.0%
TTTCAATGAGCAGGTTAGAC+CGG + Chr4:47587568-47587587 MsG0480020748.01.T01:intron 40.0%
! AACTTTAACACCTGGTGGAT+CGG + Chr4:47583448-47583467 MsG0480020748.01.T01:CDS 40.0%
! ATTGATAAAGGCGGCTTTGA+AGG + Chr4:47587833-47587852 MsG0480020748.01.T01:CDS 40.0%
!! ATCCCATTTTAGGTGTTCCT+TGG - Chr4:47585944-47585963 None:intergenic 40.0%
!! TTTAGCGTTGAGTCTTTTGG+TGG + Chr4:47583852-47583871 MsG0480020748.01.T01:intron 40.0%
!! TTTTATCGGTGTCTTCTGCA+AGG - Chr4:47584881-47584900 None:intergenic 40.0%
AACAGGATAACCGAGCCTTT+AGG - Chr4:47587905-47587924 None:intergenic 45.0%
AATCTGGAAAGGGGAAAGAG+TGG - Chr4:47585731-47585750 None:intergenic 45.0%
ACAGGATAACCGAGCCTTTA+GGG - Chr4:47587904-47587923 None:intergenic 45.0%
ACCCCAGATTTCCTCATCAA+CGG - Chr4:47587688-47587707 None:intergenic 45.0%
AGTGTGGGATAGTTATGAGG+TGG + Chr4:47587058-47587077 MsG0480020748.01.T01:intron 45.0%
ATCCTGTTTAGATGGCAGAG+GGG + Chr4:47587917-47587936 MsG0480020748.01.T01:CDS 45.0%
ATGCGTGTGAACGTAACAAC+GGG - Chr4:47586634-47586653 None:intergenic 45.0%
CAGCACTTCAACATTCGAGA+TGG - Chr4:47587717-47587736 None:intergenic 45.0%
CATAGCCACACATAAGCAGA+AGG - Chr4:47584251-47584270 None:intergenic 45.0%
CATCTCGAATGTTGAAGTGC+TGG + Chr4:47587715-47587734 MsG0480020748.01.T01:intron 45.0%
CGCAGATACACGTGGTTTAA+AGG + Chr4:47587537-47587556 MsG0480020748.01.T01:CDS 45.0%
CTTCTGCTTATGTGTGGCTA+TGG + Chr4:47584249-47584268 MsG0480020748.01.T01:intron 45.0%
GACACAAGCTGTTTGTAACC+CGG - Chr4:47587750-47587769 None:intergenic 45.0%
GACAGTGTGGGATAGTTATG+AGG + Chr4:47587055-47587074 MsG0480020748.01.T01:intron 45.0%
GATCTGTTAGCACCAAATCC+TGG + Chr4:47585350-47585369 MsG0480020748.01.T01:intron 45.0%
GCCTGGACCCTTATAAGTAT+TGG + Chr4:47584080-47584099 MsG0480020748.01.T01:intron 45.0%
GCTCGGTTATCCTGTTTAGA+TGG + Chr4:47587909-47587928 MsG0480020748.01.T01:CDS 45.0%
GGTCAGAATGTTTGTGTGTG+TGG + Chr4:47587387-47587406 MsG0480020748.01.T01:intron 45.0%
GTCGTCTGATCTTTAATCGG+TGG - Chr4:47585327-47585346 None:intergenic 45.0%
TAAATATGGAGGAGACGGAG+GGG + Chr4:47583764-47583783 MsG0480020748.01.T01:intron 45.0%
TAATGCAGTCAGAAATGCGG+AGG + Chr4:47587416-47587435 MsG0480020748.01.T01:intron 45.0%
TCTGCTTCAATACCACCAAC+AGG + Chr4:47583573-47583592 MsG0480020748.01.T01:CDS 45.0%
TTCAAAGCTCGACACCCTAA+AGG + Chr4:47587887-47587906 MsG0480020748.01.T01:CDS 45.0%
TTCAACATTCGAGATGGACG+AGG - Chr4:47587711-47587730 None:intergenic 45.0%
TTGTGGTAAAACAAGACGCG+CGG - Chr4:47585991-47586010 None:intergenic 45.0%
! GTCCGTTGATGAGGAAATCT+GGG + Chr4:47587683-47587702 MsG0480020748.01.T01:intron 45.0%
! TCCGTTGATGAGGAAATCTG+GGG + Chr4:47587684-47587703 MsG0480020748.01.T01:intron 45.0%
! TGTCCGTTGATGAGGAAATC+TGG + Chr4:47587682-47587701 MsG0480020748.01.T01:intron 45.0%
!! ATAGTTCTGAGGTGGAAGTG+TGG + Chr4:47587212-47587231 MsG0480020748.01.T01:CDS 45.0%
!! ATGGGGCAGCTTTGTTCTTA+AGG + Chr4:47587800-47587819 MsG0480020748.01.T01:intron 45.0%
!! TTAGGGTGTCGAGCTTTGAA+GGG - Chr4:47587887-47587906 None:intergenic 45.0%
!! TTTAGGGTGTCGAGCTTTGA+AGG - Chr4:47587888-47587907 None:intergenic 45.0%
!! AAAAAAGAAAATTAATAATT+TGG - Chr4:47585432-47585451 None:intergenic 5.0%
!! TCAATTATTTATTTAATAAA+TGG + Chr4:47586875-47586894 MsG0480020748.01.T01:intron 5.0%
!!! ATTATTAATTTTCTTTTTTT+AGG + Chr4:47585433-47585452 MsG0480020748.01.T01:intron 5.0%
!!! ATTTATTTATTTATTTTTTG+AGG + Chr4:47586178-47586197 MsG0480020748.01.T01:intron 5.0%
AAGAAAGCCAGCCACACTAG+GGG + Chr4:47584978-47584997 MsG0480020748.01.T01:intron 50.0%
CTCCTTCCGTCCTTCTGTAA+GGG + Chr4:47587156-47587175 MsG0480020748.01.T01:CDS 50.0%
GAAGAAAGCCAGCCACACTA+GGG + Chr4:47584977-47584996 MsG0480020748.01.T01:intron 50.0%
TATGTGGTCGCAGATACACG+TGG + Chr4:47587529-47587548 MsG0480020748.01.T01:CDS 50.0%
TCTCCTTCCGTCCTTCTGTA+AGG + Chr4:47587012-47587031 MsG0480020748.01.T01:intron 50.0%
TCTCCTTCCGTCCTTCTGTA+GGG + Chr4:47587012-47587031 MsG0480020748.01.T01:intron 50.0%
TTCCCCTCTGCCATCTAAAC+AGG - Chr4:47587922-47587941 None:intergenic 50.0%
TTCTCCTTCCGTCCTTCTGT+AGG + Chr4:47587011-47587030 MsG0480020748.01.T01:intron 50.0%
! GACAGTGTGGGATAGTTCTG+AGG + Chr4:47587201-47587220 MsG0480020748.01.T01:CDS 50.0%
!! AAGTGCTGGCAAGATATGCC+GGG + Chr4:47587729-47587748 MsG0480020748.01.T01:intron 50.0%
!! AGTGTGGGATAGTTCTGAGG+TGG + Chr4:47587204-47587223 MsG0480020748.01.T01:CDS 50.0%
!! GAAGTGCTGGCAAGATATGC+CGG + Chr4:47587728-47587747 MsG0480020748.01.T01:intron 50.0%
!! TAAAGGCGGCTTTGAAGGAG+TGG + Chr4:47587838-47587857 MsG0480020748.01.T01:CDS 50.0%
!! TATGTGGGTGCCATTTAGCC+TGG + Chr4:47584063-47584082 MsG0480020748.01.T01:intron 50.0%
AGCTCGACACCCTAAAGGCT+CGG + Chr4:47587892-47587911 MsG0480020748.01.T01:CDS 55.0%
CATTTGCATGCCCAGACCGA+TGG - Chr4:47585650-47585669 None:intergenic 55.0%
CGAAGAAAGCCAGCCACACT+AGG + Chr4:47584976-47584995 MsG0480020748.01.T01:intron 55.0%
CGGAGGAAATACGTTCGGCT+CGG + Chr4:47587433-47587452 MsG0480020748.01.T01:CDS 55.0%
CTCCTTCCGTCCTTCTGTAG+GGG + Chr4:47587013-47587032 MsG0480020748.01.T01:intron 55.0%
GGAGGAAATACGTTCGGCTC+GGG + Chr4:47587434-47587453 MsG0480020748.01.T01:CDS 55.0%
TCGACGCCCTTACAGAAGGA+CGG - Chr4:47587165-47587184 None:intergenic 55.0%
TCTCTCTCTCTCCCCTAGTG+TGG - Chr4:47584992-47585011 None:intergenic 55.0%
TGGGGGGTTGTTGACAGTGT+GGG + Chr4:47587189-47587208 MsG0480020748.01.T01:CDS 55.0%
TGGTAAAACAAGACGCGCGG+TGG - Chr4:47585988-47586007 None:intergenic 55.0%
TTGGGGGGTTGTTGACAGTG+TGG + Chr4:47587188-47587207 MsG0480020748.01.T01:CDS 55.0%
! GAGGAAATACGTTCGGCTCG+GGG + Chr4:47587435-47587454 MsG0480020748.01.T01:CDS 55.0%
! TTTTTATGGCGCGTGTGCCG+TGG - Chr4:47585585-47585604 None:intergenic 55.0%
!! GGGTGGGTTGTTGACAGTGT+GGG + Chr4:47587043-47587062 MsG0480020748.01.T01:intron 55.0%
!! TCCTTCTGTAAGGGCGTCGA+GGG + Chr4:47587165-47587184 MsG0480020748.01.T01:CDS 55.0%
!! TCGGGGTGGTGTTGTTTCTC+AGG + Chr4:47587452-47587471 MsG0480020748.01.T01:CDS 55.0%
ACCCTCGACGCCCTTACAGA+AGG - Chr4:47587169-47587188 None:intergenic 60.0%
CAAGACGCGCGGTGGAGTAT+AGG - Chr4:47585980-47585999 None:intergenic 60.0%
CCAACGCCCCTACAGAAGGA+CGG - Chr4:47587022-47587041 None:intergenic 60.0%
CGCCCTTACAGAAGGACGGA+AGG - Chr4:47587161-47587180 None:intergenic 60.0%
TCTCTCTCCCCTAGTGTGGC+TGG - Chr4:47584988-47585007 None:intergenic 60.0%
!! CGTCCTTCTGTAGGGGCGTT+GGG + Chr4:47587020-47587039 MsG0480020748.01.T01:intron 60.0%
!! CTGTAAGGGCGTCGAGGGTT+GGG + Chr4:47587170-47587189 MsG0480020748.01.T01:CDS 60.0%
!! GAAATACGTTCGGCTCGGGG+TGG + Chr4:47587438-47587457 MsG0480020748.01.T01:CDS 60.0%
!! GGCTGGCTTTCTTCGTACCC+AGG - Chr4:47584971-47584990 None:intergenic 60.0%
!! GGGGTGGGTTGTTGACAGTG+TGG + Chr4:47587042-47587061 MsG0480020748.01.T01:intron 60.0%
!! GTCCTTCTGTAAGGGCGTCG+AGG + Chr4:47587164-47587183 MsG0480020748.01.T01:CDS 60.0%
!! GTCCTTCTGTAGGGGCGTTG+GGG + Chr4:47587021-47587040 MsG0480020748.01.T01:intron 60.0%
!! TCCTTCTGTAGGGGCGTTGG+GGG + Chr4:47587022-47587041 MsG0480020748.01.T01:intron 60.0%
!! TCTGTAAGGGCGTCGAGGGT+TGG + Chr4:47587169-47587188 MsG0480020748.01.T01:CDS 60.0%
!! TGTAAGGGCGTCGAGGGTTG+GGG + Chr4:47587171-47587190 MsG0480020748.01.T01:CDS 60.0%
CGCCCCTACAGAAGGACGGA+AGG - Chr4:47587018-47587037 None:intergenic 65.0%
GCTTTCGTCGCCGATCCACC+AGG - Chr4:47583461-47583480 None:intergenic 65.0%
! CCGTCCTTCTGTAGGGGCGT+TGG + Chr4:47587019-47587038 MsG0480020748.01.T01:intron 65.0%
!! CCTTCTGTAGGGGCGTTGGG+GGG + Chr4:47587023-47587042 MsG0480020748.01.T01:intron 65.0%
!! GTAAGGGCGTCGAGGGTTGG+GGG + Chr4:47587172-47587191 MsG0480020748.01.T01:CDS 65.0%
!! TAAGGGCGTCGAGGGTTGGG+GGG + Chr4:47587173-47587192 MsG0480020748.01.T01:CDS 65.0%
CCCCCCAACGCCCCTACAGA+AGG - Chr4:47587026-47587045 None:intergenic 70.0%
!! CTGTAGGGGCGTTGGGGGGT+GGG + Chr4:47587027-47587046 MsG0480020748.01.T01:intron 70.0%
!! TCTGTAGGGGCGTTGGGGGG+TGG + Chr4:47587026-47587045 MsG0480020748.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
Chr4 gene 47583374 47588004 47583374 ID=MsG0480020748.01;Name=MsG0480020748.01
Chr4 mRNA 47583374 47588004 47583374 ID=MsG0480020748.01.T01;Parent=MsG0480020748.01;Name=MsG0480020748.01.T01;_AED=0.39;_eAED=0.39;_QI=0|0|0|0.75|1|1|4|0|263
Chr4 exon 47583374 47583594 47583374 ID=MsG0480020748.01.T01:exon:2268;Parent=MsG0480020748.01.T01
Chr4 exon 47587108 47587325 47587108 ID=MsG0480020748.01.T01:exon:2269;Parent=MsG0480020748.01.T01
Chr4 exon 47587424 47587580 47587424 ID=MsG0480020748.01.T01:exon:2270;Parent=MsG0480020748.01.T01
Chr4 exon 47587809 47588004 47587809 ID=MsG0480020748.01.T01:exon:2271;Parent=MsG0480020748.01.T01
Chr4 CDS 47583374 47583594 47583374 ID=MsG0480020748.01.T01:cds;Parent=MsG0480020748.01.T01
Chr4 CDS 47587108 47587325 47587108 ID=MsG0480020748.01.T01:cds;Parent=MsG0480020748.01.T01
Chr4 CDS 47587424 47587580 47587424 ID=MsG0480020748.01.T01:cds;Parent=MsG0480020748.01.T01
Chr4 CDS 47587809 47588004 47587809 ID=MsG0480020748.01.T01:cds;Parent=MsG0480020748.01.T01
Gene Sequence

>MsG0480020748.01.T01

ATGCCACCATTCGATTACTTCAAGCTTGCCCTAGATTTGTATGCCCTAAATGACATCAAAGATCTTCTTAATAAAACTTTAACACCTGGTGGATCGGCGACGAAAGCTGCCATCGAGAGTGCTATAAACTTAGGCACCGGATCTAACCCTAAGCTTCATTGTGATAATAAAAACTCTAGTAATTTGATGGAAGTTAGACTCTGCTTCAATACCACCAACAGTTTATTTAGACACATGTGTTCTTTGTGGGGAAATTCGAGTCATGCTTTCTCCTTCCGTCCTTCTGTAAGGGCGTCGAGGGTTGGGGGGTTGTTGACAGTGTGGGATAGTTCTGAGGTGGAAGTGTGGTCTACAGTTAGTCGGCAACATGTTCTTTTGATTCATGGAAGGTTTATCAAGACGGATGAGGTGTTTTATTTGTTTAATGTGTCTGCACCCTTCAGAAATGCGGAGGAAATACGTTCGGCTCGGGGTGGTGTTGTTTCTCAGGATGCCACTTCGTTTAACCTCTTCATTGATGAAAATATGTTGATAGATTTATCGTTATGTGGTCGCAGATACACGTGGTTTAAAGGTGATGGTATTTCAATGAGCAGCTTTGTTCTTAAGGTGAAGTTTAAATTGATAAAGGCGGCTTTGAAGGAGTGGCATTTATCTCATTCTAATAATATCCCTTCAAAGCTCGACACCCTAAAGGCTCGGTTATCCTGTTTAGATGGCAGAGGGGAAGATGAATTGTTGTCTCCTGATGAAATAGAGGAAATGTGTGGTATTACTCATGAGATTCACTAA
Protein sequence

>MsG0480020748.01.T01

MPPFDYFKLALDLYALNDIKDLLNKTLTPGGSATKAAIESAINLGTGSNPKLHCDNKNSSNLMEVRLCFNTTNSLFRHMCSLWGNSSHAFSFRPSVRASRVGGLLTVWDSSEVEVWSTVSRQHVLLIHGRFIKTDEVFYLFNVSAPFRNAEEIRSARGGVVSQDATSFNLFIDENMLIDLSLCGRRYTWFKGDGISMSSFVLKVKFKLIKAALKEWHLSHSNNIPSKLDTLKARLSCLDGRGEDELLSPDEIEEMCGITHEIH*