AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480021599.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480021599.01.T01 MTR_3g056410 87.898 157 19 0 21 177 132 288 1.76e-95 295
MsG0480021599.01.T01 MTR_3g056360 87.898 157 19 0 21 177 141 297 2.06e-95 295
MsG0480021599.01.T01 MTR_3g056380 70.199 151 45 0 23 173 166 316 6.06e-68 223
MsG0480021599.01.T01 MTR_3g056320 63.580 162 59 0 16 177 168 329 7.80e-65 214
MsG0480021599.01.T01 MTR_3g069210 59.146 164 67 0 14 177 147 310 2.29e-64 213
MsG0480021599.01.T01 MTR_3g456030 54.878 164 74 0 14 177 156 319 2.40e-63 210
MsG0480021599.01.T01 MTR_3g055720 57.927 164 69 0 14 177 156 319 3.12e-63 209
MsG0480021599.01.T01 MTR_3g455940 59.146 164 67 0 14 177 50 213 4.45e-63 208
MsG0480021599.01.T01 MTR_3g055830 59.146 164 67 0 14 177 153 316 6.91e-63 208
MsG0480021599.01.T01 MTR_3g455910 57.317 164 70 0 14 177 153 316 2.01e-62 206
MsG0480021599.01.T01 MTR_3g056635 54.658 161 73 0 17 177 161 321 2.44e-61 200
MsG0480021599.01.T01 MTR_3g056310 57.738 168 71 0 10 177 156 323 2.93e-61 204
MsG0480021599.01.T01 MTR_3g056620 62.025 158 60 0 16 173 167 324 3.81e-61 204
MsG0480021599.01.T01 MTR_3g055870 58.750 160 66 0 14 173 150 309 4.29e-61 203
MsG0480021599.01.T01 MTR_3g455900 59.375 160 65 0 14 173 35 194 1.25e-60 201
MsG0480021599.01.T01 MTR_3g055710 62.914 151 56 0 27 177 7 157 1.97e-60 199
MsG0480021599.01.T01 MTR_3g056190 58.192 177 73 1 2 177 152 328 1.20e-59 199
MsG0480021599.01.T01 MTR_3g056200 62.658 158 54 1 16 173 165 317 2.44e-59 199
MsG0480021599.01.T01 MTR_1g078190 55.625 160 71 0 14 173 153 312 1.70e-57 194
MsG0480021599.01.T01 MTR_3g056585 55.357 168 72 1 10 177 148 312 2.76e-56 190
MsG0480021599.01.T01 MTR_3g056590 51.553 161 78 0 17 177 161 321 7.96e-55 186
MsG0480021599.01.T01 MTR_3g055930 51.220 164 79 1 10 173 164 326 1.49e-53 182
MsG0480021599.01.T01 MTR_3g056610 63.200 125 46 0 16 140 144 268 1.07e-48 167
MsG0480021599.01.T01 MTR_3g456070 64.348 115 41 0 47 161 62 176 4.45e-48 166
MsG0480021599.01.T01 MTR_1g016210 46.835 158 83 1 21 177 165 322 5.64e-46 161
MsG0480021599.01.T01 MTR_3g056300 56.291 151 44 4 23 173 116 244 2.59e-45 158
MsG0480021599.01.T01 MTR_3g011390 41.143 175 103 0 3 177 149 323 2.62e-44 156
MsG0480021599.01.T01 MTR_0691s0020 43.976 166 93 0 14 179 158 323 3.47e-44 156
MsG0480021599.01.T01 MTR_1g078150 49.645 141 70 1 18 158 58 197 8.28e-44 154
MsG0480021599.01.T01 MTR_3g011270 41.954 174 101 0 4 177 147 320 9.74e-44 155
MsG0480021599.01.T01 MTR_3g011280 43.293 164 93 0 14 177 158 321 4.19e-43 153
MsG0480021599.01.T01 MTR_3g012090 43.452 168 95 0 10 177 152 319 1.68e-42 151
MsG0480021599.01.T01 MTR_3g011460 43.293 164 93 0 14 177 158 321 1.86e-42 151
MsG0480021599.01.T01 MTR_3g011420 43.478 161 91 0 17 177 161 321 2.18e-42 150
MsG0480021599.01.T01 MTR_3g019340 41.379 174 102 0 4 177 119 292 2.65e-42 150
MsG0480021599.01.T01 MTR_3g011370 42.073 164 95 0 14 177 158 321 5.08e-41 147
MsG0480021599.01.T01 MTR_3g011480 39.773 176 105 1 3 177 146 321 1.32e-40 145
MsG0480021599.01.T01 MTR_3g011300 42.236 161 93 0 17 177 161 321 2.48e-40 145
MsG0480021599.01.T01 MTR_3g012240 43.671 158 88 1 21 177 209 366 5.88e-40 144
MsG0480021599.01.T01 MTR_3g012250 43.312 157 89 0 21 177 173 329 7.26e-40 144
MsG0480021599.01.T01 MTR_3g012310 41.401 157 92 0 21 177 164 320 5.28e-38 138
MsG0480021599.01.T01 MTR_3g012050 44.595 148 82 0 30 177 162 309 1.27e-37 137
MsG0480021599.01.T01 MTR_5g027870 35.294 170 110 0 4 173 134 303 1.51e-37 137
MsG0480021599.01.T01 MTR_5g027910 37.209 172 105 2 2 173 136 304 3.90e-36 133
MsG0480021599.01.T01 MTR_3g012060 40.764 157 93 0 21 177 164 320 5.96e-36 132
MsG0480021599.01.T01 MTR_5g027860 38.312 154 95 0 20 173 149 302 7.67e-36 132
MsG0480021599.01.T01 MTR_5g027900 37.662 154 96 0 20 173 146 299 3.33e-35 130
MsG0480021599.01.T01 MTR_3g056630 43.443 122 69 0 2 123 122 243 3.86e-35 123
MsG0480021599.01.T01 MTR_3g013700 42.000 150 87 0 28 177 37 186 1.05e-34 129
MsG0480021599.01.T01 MTR_3g012270 40.127 157 94 0 21 177 173 329 3.03e-34 127
MsG0480021599.01.T01 MTR_5g027810 37.419 155 96 1 20 173 150 304 1.23e-33 125
MsG0480021599.01.T01 MTR_4g077290 57.944 107 40 3 7 113 4 105 4.17e-31 109
MsG0480021599.01.T01 MTR_1g011990 50.435 115 51 2 64 177 196 305 1.47e-29 114
MsG0480021599.01.T01 MTR_3g011280 35.152 165 73 2 14 177 158 289 5.18e-28 109
MsG0480021599.01.T01 MTR_3g055900 36.986 146 74 3 29 173 163 291 2.48e-26 103
MsG0480021599.01.T01 MTR_3g452130 55.696 79 35 0 14 92 150 228 2.68e-26 100
MsG0480021599.01.T01 MTR_0425s0020 36.184 152 84 4 27 173 168 311 1.00e-25 103
MsG0480021599.01.T01 MTR_3g022300 36.842 152 83 4 27 173 168 311 1.75e-25 102
MsG0480021599.01.T01 MTR_5g021080 39.837 123 70 1 55 177 191 309 2.29e-25 102
MsG0480021599.01.T01 MTR_3g022130 36.842 152 83 4 27 173 142 285 2.32e-25 102
MsG0480021599.01.T01 MTR_3g022600 35.526 152 85 4 27 173 168 311 1.04e-24 100
MsG0480021599.01.T01 MTR_3g011360 36.585 164 71 4 14 177 161 291 1.55e-24 100
MsG0480021599.01.T01 MTR_3g023030 36.184 152 84 3 27 173 170 313 5.92e-23 95.5
MsG0480021599.01.T01 MTR_3g023030 36.184 152 84 3 27 173 170 313 6.42e-23 95.5
MsG0480021599.01.T01 MTR_3g027470 34.211 152 87 3 27 173 77 220 6.18e-22 92.4
MsG0480021599.01.T01 MTR_3g027200 34.868 152 86 3 27 173 168 311 2.83e-21 90.5
MsG0480021599.01.T01 MTR_3g056615 68.852 61 19 0 23 83 175 235 5.22e-21 87.4
MsG0480021599.01.T01 MTR_3g027420 31.579 152 91 3 27 173 152 295 6.72e-21 89.4
MsG0480021599.01.T01 MTR_0065s0100 31.169 154 97 3 27 176 163 311 8.56e-21 89.4
MsG0480021599.01.T01 MTR_3g435740 31.169 154 99 2 27 173 201 354 1.93e-20 88.2
MsG0480021599.01.T01 MTR_3g018930 30.921 152 92 3 27 173 170 313 2.64e-20 87.8
MsG0480021599.01.T01 MTR_3g022230 34.211 152 87 4 27 173 168 311 5.08e-20 87.0
MsG0480021599.01.T01 MTR_3g018930 30.921 152 92 3 27 173 170 313 6.56e-20 86.7
MsG0480021599.01.T01 MTR_0230s0010 34.868 152 85 5 29 173 153 297 7.47e-20 86.7
MsG0480021599.01.T01 MTR_0511s0020 35.526 152 84 5 29 173 153 297 1.13e-19 85.9
MsG0480021599.01.T01 MTR_6g052760 34.416 154 87 5 27 173 151 297 1.17e-19 85.9
MsG0480021599.01.T01 MTR_0133s0020 34.211 152 88 4 27 173 150 294 1.40e-19 85.9
MsG0480021599.01.T01 MTR_6g046130 33.557 149 88 4 29 173 154 295 1.65e-19 85.5
MsG0480021599.01.T01 MTR_0144s0060 33.557 149 88 4 29 173 154 295 2.25e-19 85.1
MsG0480021599.01.T01 MTR_5g035530 31.293 147 89 3 32 173 46 185 2.71e-19 84.7
MsG0480021599.01.T01 MTR_0133s0030 32.716 162 94 5 17 173 145 296 3.00e-19 84.7
MsG0480021599.01.T01 MTR_6g047450 32.237 152 92 4 26 173 151 295 3.31e-19 84.7
MsG0480021599.01.T01 MTR_3g033130 31.405 121 81 1 55 173 175 295 4.25e-19 84.3
MsG0480021599.01.T01 MTR_4g073840 29.310 174 98 3 27 175 159 332 4.83e-19 84.0
MsG0480021599.01.T01 MTR_3g032110 30.719 153 93 3 27 173 166 311 5.52e-19 84.0
MsG0480021599.01.T01 MTR_3g032760 31.646 158 85 4 27 173 165 310 5.56e-19 84.0
MsG0480021599.01.T01 MTR_3g452120 67.273 55 18 0 123 177 1 55 7.01e-19 80.5
MsG0480021599.01.T01 MTR_6g052455 34.416 154 87 5 27 173 42 188 8.96e-19 83.6
MsG0480021599.01.T01 MTR_8g036195 33.548 155 87 6 27 173 151 297 9.31e-19 83.2
MsG0480021599.01.T01 MTR_3g033380 31.646 158 85 5 27 173 169 314 9.91e-19 83.2
MsG0480021599.01.T01 MTR_3g032340 30.719 153 93 3 27 173 170 315 1.20e-18 83.2
MsG0480021599.01.T01 MTR_3g035940 30.719 153 93 3 27 173 165 310 1.43e-18 82.8
MsG0480021599.01.T01 MTR_3g035480 33.058 121 72 2 55 173 197 310 2.45e-18 82.0
MsG0480021599.01.T01 MTR_5g065140 54.412 68 31 0 99 166 34 101 2.48e-18 80.1
MsG0480021599.01.T01 MTR_5g035480 30.128 156 97 3 27 177 166 314 2.55e-18 82.0
MsG0480021599.01.T01 MTR_3g026660 32.237 152 91 4 27 173 162 306 4.01e-18 81.6
MsG0480021599.01.T01 MTR_5g037450 34.014 147 85 4 32 173 171 310 4.02e-18 81.6
MsG0480021599.01.T01 MTR_3g026660 32.237 152 91 4 27 173 162 306 4.11e-18 81.6
MsG0480021599.01.T01 MTR_3g055740 58.730 63 26 0 14 76 153 215 4.23e-18 81.3
MsG0480021599.01.T01 MTR_8g011590 29.605 152 97 3 29 176 47 192 4.25e-18 81.3
MsG0480021599.01.T01 MTR_3g032150 32.278 158 84 4 27 173 163 308 4.40e-18 81.3
MsG0480021599.01.T01 MTR_3g032370 32.278 158 84 4 27 173 163 308 4.72e-18 81.3
MsG0480021599.01.T01 MTR_3g033110 31.818 154 98 3 27 173 156 309 5.97e-18 80.9
MsG0480021599.01.T01 MTR_5g071823 29.747 158 91 4 29 173 151 301 6.54e-18 80.9
MsG0480021599.01.T01 MTR_5g071850 29.747 158 91 4 29 173 151 301 6.54e-18 80.9
MsG0480021599.01.T01 MTR_3g033240 30.909 165 91 5 20 173 158 310 6.82e-18 80.9
MsG0480021599.01.T01 MTR_3g033080 31.646 158 92 5 27 173 157 309 8.26e-18 80.5
MsG0480021599.01.T01 MTR_3g028040 32.231 121 73 2 55 173 197 310 1.02e-17 80.5
MsG0480021599.01.T01 MTR_3g031940 31.013 158 86 4 27 173 169 314 1.11e-17 80.1
MsG0480021599.01.T01 MTR_3g086070 31.707 164 95 6 17 173 143 296 1.23e-17 80.1
MsG0480021599.01.T01 MTR_8g038570 28.662 157 98 4 27 177 176 324 1.23e-17 80.1
MsG0480021599.01.T01 MTR_3g015280 28.571 154 94 4 27 176 156 297 1.32e-17 80.1
MsG0480021599.01.T01 MTR_3g035840 33.884 121 71 3 55 173 197 310 1.50e-17 79.7
MsG0480021599.01.T01 MTR_8g011180 29.412 153 96 4 29 176 164 309 1.76e-17 79.7
MsG0480021599.01.T01 MTR_0002s0090 30.065 153 94 3 27 173 165 310 1.82e-17 79.7
MsG0480021599.01.T01 MTR_3g035500 30.065 153 94 3 27 173 165 310 1.82e-17 79.7
MsG0480021599.01.T01 MTR_3g033860 33.058 121 72 2 55 173 197 310 1.89e-17 79.7
MsG0480021599.01.T01 MTR_6g046570 31.875 160 94 6 21 173 143 294 1.92e-17 79.7
MsG0480021599.01.T01 MTR_0002s0110 30.065 153 94 3 27 173 165 310 2.54e-17 79.3
MsG0480021599.01.T01 MTR_3g035960 30.065 153 94 3 27 173 165 310 2.55e-17 79.3
MsG0480021599.01.T01 MTR_3g015500 29.221 154 93 4 27 176 194 335 2.81e-17 79.0
MsG0480021599.01.T01 MTR_6g046930 31.579 152 92 4 27 173 149 293 2.83e-17 79.0
MsG0480021599.01.T01 MTR_0256s0050 32.500 160 93 6 21 173 145 296 3.06e-17 79.0
MsG0480021599.01.T01 MTR_3g015550 29.801 151 90 4 30 176 159 297 3.30e-17 79.0
MsG0480021599.01.T01 MTR_3g015550 29.801 151 90 4 30 176 196 334 3.52e-17 79.0
MsG0480021599.01.T01 MTR_3g032500 29.412 153 95 3 27 173 169 314 4.04e-17 78.6
MsG0480021599.01.T01 MTR_5g037460 31.579 152 92 4 32 177 45 190 4.68e-17 78.6
MsG0480021599.01.T01 MTR_2g063777 29.412 153 95 4 27 173 165 310 5.14e-17 78.2
MsG0480021599.01.T01 MTR_1g030770 28.302 159 103 4 19 173 155 306 5.23e-17 78.2
MsG0480021599.01.T01 MTR_5g035300 30.612 147 90 3 32 173 167 306 5.79e-17 77.8
MsG0480021599.01.T01 MTR_3g022060 31.818 154 92 4 25 173 101 246 6.58e-17 78.2
MsG0480021599.01.T01 MTR_3g032800 30.719 153 93 4 27 173 165 310 6.71e-17 78.2
MsG0480021599.01.T01 MTR_3g032960 30.719 153 93 4 27 173 165 310 6.92e-17 77.8
MsG0480021599.01.T01 MTR_8g027540 26.974 152 101 3 29 176 165 310 7.13e-17 77.8
MsG0480021599.01.T01 MTR_1g078490 29.870 154 101 3 27 176 161 311 7.17e-17 77.8
MsG0480021599.01.T01 MTR_6g452490 30.263 152 95 3 29 176 164 308 7.82e-17 77.8
MsG0480021599.01.T01 MTR_4g050790 28.571 154 94 4 27 176 156 297 7.98e-17 77.8
MsG0480021599.01.T01 MTR_8g011550 27.632 152 100 4 29 176 165 310 8.65e-17 77.8
MsG0480021599.01.T01 MTR_5g040900 29.697 165 91 5 23 177 139 288 1.11e-16 77.4
MsG0480021599.01.T01 MTR_8g030860 29.221 154 102 3 27 173 164 317 1.17e-16 77.4
MsG0480021599.01.T01 MTR_3g019040 31.579 152 91 3 27 173 168 311 1.22e-16 77.4
MsG0480021599.01.T01 MTR_3g034380 31.405 121 74 2 55 173 197 310 1.27e-16 77.0
MsG0480021599.01.T01 MTR_3g034430 28.105 153 97 3 27 173 165 310 1.46e-16 77.0
MsG0480021599.01.T01 MTR_3g032200 29.412 153 95 4 27 173 169 314 1.52e-16 77.0
MsG0480021599.01.T01 MTR_7g078640 28.655 171 113 4 14 176 149 318 1.74e-16 76.6
MsG0480021599.01.T01 MTR_4g050410 30.579 121 82 1 55 173 189 309 1.79e-16 76.6
MsG0480021599.01.T01 MTR_3g030960 31.013 158 86 5 27 173 165 310 1.82e-16 76.6
MsG0480021599.01.T01 MTR_7g078300 28.655 171 113 4 14 176 149 318 1.95e-16 76.6
MsG0480021599.01.T01 MTR_6g016420 29.870 154 97 3 28 176 150 297 2.03e-16 76.6
MsG0480021599.01.T01 MTR_3g030980 31.013 158 86 5 27 173 165 310 2.07e-16 76.6
MsG0480021599.01.T01 MTR_6g016420 29.870 154 97 3 28 176 150 297 2.24e-16 76.6
MsG0480021599.01.T01 MTR_2g078070 29.412 153 95 4 29 176 169 313 2.51e-16 76.3
MsG0480021599.01.T01 MTR_7g021000 30.263 152 93 3 27 173 154 297 3.06e-16 76.3
MsG0480021599.01.T01 MTR_1g047800 31.579 152 91 4 31 176 159 303 3.07e-16 76.3
MsG0480021599.01.T01 MTR_3g435720 29.412 153 95 4 27 173 165 310 3.82e-16 75.9
MsG0480021599.01.T01 MTR_7g021000 30.263 152 93 3 27 173 154 297 4.04e-16 75.9
MsG0480021599.01.T01 MTR_3g015560 26.623 154 97 4 27 176 156 297 4.20e-16 75.5
MsG0480021599.01.T01 MTR_6g046440 31.818 154 91 5 27 173 150 296 4.67e-16 75.5
MsG0480021599.01.T01 MTR_3g034460 30.579 121 75 2 55 173 181 294 4.93e-16 75.5
MsG0480021599.01.T01 MTR_7g078630 29.651 172 110 4 14 176 83 252 6.45e-16 75.1
MsG0480021599.01.T01 MTR_8g106550 31.013 158 93 4 27 173 135 287 7.10e-16 75.1
MsG0480021599.01.T01 MTR_8g011300 30.000 150 92 4 29 173 163 304 9.40e-16 74.7
MsG0480021599.01.T01 MTR_6g046480 30.667 150 92 4 29 173 154 296 1.04e-15 74.7
MsG0480021599.01.T01 MTR_8g011280 26.974 152 101 3 29 176 29 174 1.11e-15 74.3
MsG0480021599.01.T01 MTR_3g014080 30.464 151 94 4 27 173 166 309 1.22e-15 74.3
MsG0480021599.01.T01 MTR_3g014080 30.464 151 94 4 27 173 166 309 1.23e-15 74.3
MsG0480021599.01.T01 MTR_8g011320 26.974 152 101 3 29 176 126 271 1.26e-15 74.3
MsG0480021599.01.T01 MTR_3g023320 36.220 127 70 4 51 173 178 297 1.56e-15 73.9
MsG0480021599.01.T01 MTR_3g015260 32.520 123 71 3 55 173 199 313 1.73e-15 73.9
MsG0480021599.01.T01 MTR_3g015260 32.520 123 71 3 55 173 199 313 1.87e-15 73.9
MsG0480021599.01.T01 MTR_3g022790 30.719 153 91 4 27 173 159 302 1.94e-15 73.9
MsG0480021599.01.T01 MTR_8g010440 26.543 162 107 4 19 176 155 308 2.40e-15 73.6
MsG0480021599.01.T01 MTR_8g011170 28.105 153 98 4 29 176 150 295 3.95e-15 72.8
MsG0480021599.01.T01 MTR_2g039090 30.556 144 91 3 32 173 155 291 4.39e-15 72.8
MsG0480021599.01.T01 MTR_4g119195 29.114 158 102 3 29 176 164 321 5.48e-15 72.4
MsG0480021599.01.T01 MTR_4g119195 29.114 158 102 3 29 176 164 321 5.65e-15 72.4
MsG0480021599.01.T01 MTR_3g027250 31.373 153 90 4 27 173 153 296 6.66e-15 72.4
MsG0480021599.01.T01 MTR_0005s0200 27.160 162 106 3 20 176 176 330 7.25e-15 72.0
MsG0480021599.01.T01 MTR_7g078790 28.409 176 112 5 4 173 130 297 8.77e-15 72.0
MsG0480021599.01.T01 MTR_3g014040 27.059 170 108 4 12 173 153 314 1.09e-14 71.6
MsG0480021599.01.T01 MTR_3g055890 36.170 94 51 2 15 108 8 92 1.23e-14 66.2
MsG0480021599.01.T01 MTR_2g038510 30.726 179 109 5 5 173 137 310 1.35e-14 71.2
MsG0480021599.01.T01 MTR_5g070960 27.976 168 101 5 19 173 141 301 1.63e-14 71.2
MsG0480021599.01.T01 MTR_2g038760 28.402 169 108 4 14 176 157 318 1.67e-14 71.2
MsG0480021599.01.T01 MTR_5g071780 28.846 156 87 4 28 173 160 301 1.88e-14 70.9
MsG0480021599.01.T01 MTR_1g023600 27.848 158 94 5 29 173 148 298 2.03e-14 70.9
MsG0480021599.01.T01 MTR_1g008240 25.595 168 105 4 20 173 137 298 2.16e-14 70.9
MsG0480021599.01.T01 MTR_5g035240 26.490 151 100 3 27 173 162 305 2.56e-14 70.5
MsG0480021599.01.T01 MTR_3g014510 24.405 168 113 3 13 173 151 311 2.60e-14 70.5
MsG0480021599.01.T01 MTR_8g038590 29.801 151 93 4 32 176 177 320 2.93e-14 70.5
MsG0480021599.01.T01 MTR_1g037730 27.647 170 107 5 12 173 153 314 4.52e-14 69.3
MsG0480021599.01.T01 MTR_4g094540 31.538 130 76 3 55 176 198 322 4.97e-14 69.7
MsG0480021599.01.T01 MTR_7g015770 28.276 145 104 0 29 173 156 300 6.16e-14 69.3
MsG0480021599.01.T01 MTR_3g014360 22.543 173 119 3 9 173 146 311 7.37e-14 69.3
MsG0480021599.01.T01 MTR_3g014390 26.036 169 111 3 12 173 148 309 7.92e-14 69.3
MsG0480021599.01.T01 MTR_1g090673 28.161 174 110 4 7 173 636 801 7.94e-14 69.3
MsG0480021599.01.T01 MTR_2g038930 30.370 135 83 3 42 173 15 141 9.37e-14 68.9
MsG0480021599.01.T01 MTR_7g091550 26.786 168 101 4 27 176 165 328 1.17e-13 68.6
MsG0480021599.01.T01 MTR_7g091550 29.286 140 81 3 27 150 998 1135 1.34e-11 62.8
MsG0480021599.01.T01 MTR_5g039570 31.579 133 74 3 51 173 151 276 1.26e-13 68.6
MsG0480021599.01.T01 MTR_6g084550 29.231 130 73 3 55 177 199 316 1.29e-13 68.6
MsG0480021599.01.T01 MTR_5g072140 26.786 168 103 3 19 173 141 301 1.44e-13 68.2
MsG0480021599.01.T01 MTR_4g119140 31.538 130 81 2 29 150 147 276 1.49e-13 68.2
MsG0480021599.01.T01 MTR_2g038900 27.647 170 108 4 14 176 146 307 1.86e-13 68.2
MsG0480021599.01.T01 MTR_3g018980 29.487 156 97 3 27 177 168 315 1.99e-13 67.8
MsG0480021599.01.T01 MTR_3g070590 26.316 152 100 3 27 173 150 294 2.32e-13 67.8
MsG0480021599.01.T01 MTR_3g018980 29.487 156 97 3 27 177 168 315 3.23e-13 67.4
MsG0480021599.01.T01 MTR_5g071670 29.231 130 75 4 54 173 174 296 3.76e-13 67.0
MsG0480021599.01.T01 MTR_1g022380 25.301 166 103 5 21 173 139 296 4.50e-13 67.0
MsG0480021599.01.T01 MTR_1g037610 24.074 162 109 3 1 155 136 290 4.78e-13 67.0
MsG0480021599.01.T01 MTR_5g037500 30.579 121 75 3 55 173 193 306 5.50e-13 66.6
MsG0480021599.01.T01 MTR_3g014320 22.989 174 117 4 9 173 146 311 5.57e-13 66.6
MsG0480021599.01.T01 MTR_5g071220 27.215 158 95 5 29 173 151 301 5.71e-13 66.6
MsG0480021599.01.T01 MTR_5g071220 27.215 158 95 5 29 173 151 301 5.77e-13 66.6
MsG0480021599.01.T01 MTR_3g071130 26.316 152 100 3 27 173 150 294 6.36e-13 66.6
MsG0480021599.01.T01 MTR_2g039010 29.870 154 99 3 25 176 141 287 7.15e-13 65.9
MsG0480021599.01.T01 MTR_0267s0070 27.528 178 112 5 12 173 142 318 7.35e-13 66.2
MsG0480021599.01.T01 MTR_3g025360 29.134 127 80 2 27 150 176 295 7.43e-13 66.2
MsG0480021599.01.T01 MTR_4g055630 29.231 130 75 3 54 173 179 301 9.35e-13 65.9
MsG0480021599.01.T01 MTR_5g072340 26.190 168 104 4 19 173 141 301 1.02e-12 65.9
MsG0480021599.01.T01 MTR_3g022570 26.974 152 100 4 27 173 188 333 1.20e-12 65.9
MsG0480021599.01.T01 MTR_3g022400 27.211 147 95 3 32 173 149 288 1.33e-12 65.5
MsG0480021599.01.T01 MTR_3g022400 27.211 147 95 3 32 173 149 288 1.43e-12 65.5
MsG0480021599.01.T01 MTR_2g014840 29.323 133 69 4 54 176 194 311 2.57e-12 64.7
MsG0480021599.01.T01 MTR_7g091200 28.235 170 104 3 15 176 151 310 2.80e-12 64.7
MsG0480021599.01.T01 MTR_1g090680 26.554 177 105 4 11 173 692 857 3.10e-12 64.7
MsG0480021599.01.T01 MTR_3g021170 28.846 156 96 4 27 175 149 296 3.18e-12 64.3
MsG0480021599.01.T01 MTR_3g022920 28.571 147 93 3 36 177 148 287 3.92e-12 64.3
MsG0480021599.01.T01 MTR_5g070490 26.582 158 96 5 29 173 151 301 5.01e-12 63.9
MsG0480021599.01.T01 MTR_3g007190 25.668 187 114 7 1 173 54 229 5.23e-12 63.9
MsG0480021599.01.T01 MTR_2g060700 29.412 136 71 3 48 173 10 130 7.24e-12 63.2
MsG0480021599.01.T01 MTR_5g070470 27.215 158 95 5 29 173 151 301 8.51e-12 63.2
MsG0480021599.01.T01 MTR_7g071940 28.462 130 76 4 54 173 174 296 1.25e-11 62.8
MsG0480021599.01.T01 MTR_5g071470 25.000 168 106 4 19 173 141 301 1.32e-11 62.8
MsG0480021599.01.T01 MTR_6g016430 30.172 116 73 2 64 177 191 300 1.39e-11 62.8
MsG0480021599.01.T01 MTR_8g011600 26.119 134 91 2 42 173 13 140 1.54e-11 62.4
MsG0480021599.01.T01 MTR_8g445980 29.730 148 91 5 31 173 164 303 1.58e-11 62.4
MsG0480021599.01.T01 MTR_3g464870 30.323 155 86 5 31 177 144 284 1.96e-11 62.4
MsG0480021599.01.T01 MTR_3g464870 30.323 155 86 5 31 177 144 284 2.09e-11 62.0
MsG0480021599.01.T01 MTR_7g013560 27.778 162 106 4 19 176 156 310 2.18e-11 62.0
MsG0480021599.01.T01 MTR_3g019000 26.490 151 99 4 28 173 159 302 2.72e-11 61.6
MsG0480021599.01.T01 MTR_1g090690 27.922 154 95 4 25 173 792 934 3.26e-11 61.6
MsG0480021599.01.T01 MTR_5g035230 28.000 150 82 3 27 173 158 284 4.08e-11 60.8
MsG0480021599.01.T01 MTR_3g021400 30.000 120 74 2 32 148 141 253 4.13e-11 61.2
MsG0480021599.01.T01 MTR_4g126000 28.455 123 71 3 61 173 128 243 4.98e-11 60.8
MsG0480021599.01.T01 MTR_4g022560 29.560 159 94 3 27 179 157 303 9.20e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480021599.01.T01 AT3G07040 32.692 156 105 0 18 173 158 313 9.11e-31 117
MsG0480021599.01.T01 AT5G48620 35.862 145 86 3 29 173 162 299 1.12e-20 89.0
MsG0480021599.01.T01 AT5G48620 35.862 145 86 3 29 173 162 299 1.12e-20 89.0
MsG0480021599.01.T01 AT5G48620 35.862 145 86 3 29 173 162 299 1.12e-20 89.0
MsG0480021599.01.T01 AT5G48620 35.862 145 86 3 29 173 162 299 1.12e-20 89.0
MsG0480021599.01.T01 AT5G48620 35.862 145 86 3 29 173 162 299 1.12e-20 89.0
MsG0480021599.01.T01 AT5G48620 35.862 145 86 3 29 173 162 299 1.12e-20 89.0
MsG0480021599.01.T01 AT5G43470 36.552 145 85 3 29 173 162 299 5.46e-20 87.0
MsG0480021599.01.T01 AT5G43470 36.552 145 85 3 29 173 162 299 5.46e-20 87.0
MsG0480021599.01.T01 AT5G43470 36.552 145 85 3 29 173 162 299 5.46e-20 87.0
MsG0480021599.01.T01 AT5G43470 36.552 145 85 3 29 173 162 299 5.46e-20 87.0
MsG0480021599.01.T01 AT1G53350 36.054 147 85 4 28 173 159 297 7.47e-19 83.6
MsG0480021599.01.T01 AT3G46530 31.507 146 98 2 29 173 160 304 8.77e-19 83.6
MsG0480021599.01.T01 AT3G50950 32.667 150 90 3 28 174 156 297 1.81e-18 82.4
MsG0480021599.01.T01 AT3G50950 32.667 150 90 3 28 174 156 297 1.81e-18 82.4
MsG0480021599.01.T01 AT1G50180 31.288 163 107 3 11 173 144 301 2.03e-18 82.4
MsG0480021599.01.T01 AT1G10920 34.694 147 89 3 28 174 36 175 5.85e-18 80.9
MsG0480021599.01.T01 AT1G10920 34.694 147 89 3 28 174 36 175 5.85e-18 80.9
MsG0480021599.01.T01 AT1G10920 34.694 147 89 3 28 174 36 175 5.85e-18 80.9
MsG0480021599.01.T01 AT1G58410 33.108 148 94 3 29 176 159 301 4.24e-17 78.6
MsG0480021599.01.T01 AT1G58410 32.432 148 95 3 29 176 159 301 5.07e-17 78.2
MsG0480021599.01.T01 AT1G58410 32.432 148 95 3 29 176 159 301 5.07e-17 78.2
MsG0480021599.01.T01 AT1G58410 32.432 148 95 3 29 176 159 301 5.07e-17 78.2
MsG0480021599.01.T01 AT1G58807 36.424 151 81 6 28 173 159 299 7.60e-17 77.8
MsG0480021599.01.T01 AT1G59124 36.424 151 81 6 28 173 159 299 7.60e-17 77.8
MsG0480021599.01.T01 AT1G58400 34.459 148 92 3 29 176 161 303 8.28e-17 77.8
MsG0480021599.01.T01 AT1G58400 34.459 148 92 3 29 176 161 303 8.28e-17 77.8
MsG0480021599.01.T01 AT1G58848 36.424 151 81 6 28 173 159 299 8.60e-17 77.8
MsG0480021599.01.T01 AT1G59218 36.424 151 81 6 28 173 159 299 8.60e-17 77.8
MsG0480021599.01.T01 AT1G59218 36.424 151 81 6 28 173 159 299 8.60e-17 77.8
MsG0480021599.01.T01 AT1G59218 36.424 151 81 6 28 173 159 299 8.60e-17 77.8
MsG0480021599.01.T01 AT1G58848 36.424 151 81 6 28 173 159 299 8.60e-17 77.8
MsG0480021599.01.T01 AT1G58807 36.424 151 81 6 28 173 159 299 8.82e-17 77.8
MsG0480021599.01.T01 AT1G59124 36.424 151 81 6 28 173 159 299 8.82e-17 77.8
MsG0480021599.01.T01 AT1G59780 31.293 147 94 2 28 174 151 290 1.02e-16 77.4
MsG0480021599.01.T01 AT1G59780 31.293 147 94 2 28 174 156 295 1.15e-16 77.4
MsG0480021599.01.T01 AT3G46710 30.612 147 96 2 29 173 158 300 1.60e-16 77.0
MsG0480021599.01.T01 AT5G35450 32.877 146 91 3 28 173 159 297 1.78e-16 76.6
MsG0480021599.01.T01 AT5G35450 32.877 146 91 3 28 173 159 297 1.78e-16 76.6
MsG0480021599.01.T01 AT1G58390 34.014 147 92 3 29 175 160 301 5.17e-16 75.5
MsG0480021599.01.T01 AT1G58390 34.014 147 92 3 29 175 160 301 5.17e-16 75.5
MsG0480021599.01.T01 AT1G59620 32.192 146 92 2 28 173 23 161 1.03e-15 74.7
MsG0480021599.01.T01 AT1G58602 31.081 148 98 3 28 173 158 303 1.09e-15 74.7
MsG0480021599.01.T01 AT1G58602 31.081 148 98 3 28 173 158 303 1.09e-15 74.7
MsG0480021599.01.T01 AT3G14470 29.299 157 97 6 27 176 167 316 1.88e-14 70.9
MsG0480021599.01.T01 AT3G14470 29.299 157 97 6 27 176 167 316 1.88e-14 70.9
MsG0480021599.01.T01 AT3G14460 27.419 124 81 2 55 176 195 311 4.78e-14 69.7
MsG0480021599.01.T01 AT1G58400 33.333 126 80 2 29 154 161 282 1.47e-13 68.2
MsG0480021599.01.T01 AT3G46730 33.113 151 91 3 29 173 159 305 1.10e-12 65.9

Find 30 sgRNAs with CRISPR-Local

Find 42 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGTATGGAATTTACAATTT+TGG 0.135586 4:+60472390 MsG0480021599.01.T01:CDS
TGCCATGATTGATAATAAAA+AGG 0.190217 4:+60472427 MsG0480021599.01.T01:CDS
CTTCCATATCCAATCATCTT+TGG 0.274966 4:+60471941 MsG0480021599.01.T01:CDS
AGTCATTTGATCGACACTTT+GGG 0.288501 4:-60472300 None:intergenic
ACCCTTGTTCCAAAGATGAT+TGG 0.350438 4:-60471950 None:intergenic
AACACTTTGATTGTCATGTA+TGG 0.351078 4:+60472192 MsG0480021599.01.T01:CDS
CACACAATTGTCACCATTGT+TGG 0.356655 4:+60472107 MsG0480021599.01.T01:CDS
GTTCCAAAGATGATTGGATA+TGG 0.359605 4:-60471944 None:intergenic
CAAGAGACATACTAATTGAT+TGG 0.364922 4:+60472063 MsG0480021599.01.T01:CDS
CGAAGTGAGAAACTACTTGC+AGG 0.399158 4:+60472340 MsG0480021599.01.T01:CDS
ACTAATTGATTGGTTGGTAG+AGG 0.399725 4:+60472073 MsG0480021599.01.T01:CDS
TCTCAATCATACAATATAGA+AGG 0.418768 4:+60472224 MsG0480021599.01.T01:CDS
TTGTCCTCCCTTTCCAACAA+TGG 0.454219 4:-60472120 None:intergenic
GAGTCATTTGATCGACACTT+TGG 0.457352 4:-60472301 None:intergenic
CAATCAATTAGTATGTCTCT+TGG 0.459055 4:-60472062 None:intergenic
AGACATACTAATTGATTGGT+TGG 0.487041 4:+60472067 MsG0480021599.01.T01:CDS
ATTGTCACCATTGTTGGAAA+GGG 0.507661 4:+60472113 MsG0480021599.01.T01:CDS
CATTTGATCGACACTTTGGG+GGG 0.532223 4:-60472297 None:intergenic
AATTGTCACCATTGTTGGAA+AGG 0.542331 4:+60472112 MsG0480021599.01.T01:CDS
GTCACCATTGTTGGAAAGGG+AGG 0.551060 4:+60472116 MsG0480021599.01.T01:CDS
CTAATTGATTGGTTGGTAGA+GGG 0.554334 4:+60472074 MsG0480021599.01.T01:CDS
TCCAATCATCTTTGGAACAA+GGG 0.569585 4:+60471949 MsG0480021599.01.T01:CDS
ATCCAATCATCTTTGGAACA+AGG 0.572779 4:+60471948 MsG0480021599.01.T01:CDS
GTCATTTGATCGACACTTTG+GGG 0.583564 4:-60472299 None:intergenic
ATTGTTGGAAAGGGAGGACA+AGG 0.600888 4:+60472122 MsG0480021599.01.T01:CDS
ACAATATAGAAGGCTTGCTG+AGG 0.610339 4:+60472234 MsG0480021599.01.T01:CDS
CAATATAGAAGGCTTGCTGA+GGG 0.643254 4:+60472235 MsG0480021599.01.T01:CDS
TCATTTGATCGACACTTTGG+GGG 0.645970 4:-60472298 None:intergenic
ATTTGATCGACACTTTGGGG+GGG 0.652840 4:-60472296 None:intergenic
ATGGATGAAGATGATGTCGT+AGG 0.712628 4:+60472029 MsG0480021599.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATGTATGGAATTTACAATTT+TGG + Chr4:60472390-60472409 MsG0480021599.01.T01:CDS 20.0%
!!! TGTATGGAATTTACAATTTT+GGG + Chr4:60472391-60472410 MsG0480021599.01.T01:CDS 20.0%
! TCTCAATCATACAATATAGA+AGG + Chr4:60472224-60472243 MsG0480021599.01.T01:CDS 25.0%
!! GCCATGATTGATAATAAAAA+GGG + Chr4:60472428-60472447 MsG0480021599.01.T01:CDS 25.0%
!! TGCCATGATTGATAATAAAA+AGG + Chr4:60472427-60472446 MsG0480021599.01.T01:CDS 25.0%
!!! TTATCGTTTTTGATGATGTA+TGG + Chr4:60472375-60472394 MsG0480021599.01.T01:CDS 25.0%
AACACTTTGATTGTCATGTA+TGG + Chr4:60472192-60472211 MsG0480021599.01.T01:CDS 30.0%
AGACATACTAATTGATTGGT+TGG + Chr4:60472067-60472086 MsG0480021599.01.T01:CDS 30.0%
CAAGAGACATACTAATTGAT+TGG + Chr4:60472063-60472082 MsG0480021599.01.T01:CDS 30.0%
CAATCAATTAGTATGTCTCT+TGG - Chr4:60472065-60472084 None:intergenic 30.0%
! GCCCTTTTTATTATCAATCA+TGG - Chr4:60472432-60472451 None:intergenic 30.0%
AAAAACTACTCTTGCCAAGA+AGG + Chr4:60472145-60472164 MsG0480021599.01.T01:CDS 35.0%
AATTGTCACCATTGTTGGAA+AGG + Chr4:60472112-60472131 MsG0480021599.01.T01:CDS 35.0%
AGTCATTTGATCGACACTTT+GGG - Chr4:60472303-60472322 None:intergenic 35.0%
ATTGTCACCATTGTTGGAAA+GGG + Chr4:60472113-60472132 MsG0480021599.01.T01:CDS 35.0%
CTTCCATATCCAATCATCTT+TGG + Chr4:60471941-60471960 MsG0480021599.01.T01:CDS 35.0%
GAAACTACTTGCAGGAAAAA+AGG + Chr4:60472348-60472367 MsG0480021599.01.T01:CDS 35.0%
GTTCCAAAGATGATTGGATA+TGG - Chr4:60471947-60471966 None:intergenic 35.0%
TACAAAATTGAGCCTTTCGA+AGG - Chr4:60472010-60472029 None:intergenic 35.0%
TACTGCAACAAACTTCAACA+TGG + Chr4:60471980-60471999 MsG0480021599.01.T01:intron 35.0%
! CACAAGTTTTACGAACAACA+AGG + Chr4:60472266-60472285 MsG0480021599.01.T01:CDS 35.0%
! TCGAAAGGCTCAATTTTGTA+TGG + Chr4:60472010-60472029 MsG0480021599.01.T01:intron 35.0%
!! ACTAATTGATTGGTTGGTAG+AGG + Chr4:60472073-60472092 MsG0480021599.01.T01:CDS 35.0%
!! ATCCAATCATCTTTGGAACA+AGG + Chr4:60471948-60471967 MsG0480021599.01.T01:CDS 35.0%
!! CTAATTGATTGGTTGGTAGA+GGG + Chr4:60472074-60472093 MsG0480021599.01.T01:CDS 35.0%
!! TCCAATCATCTTTGGAACAA+GGG + Chr4:60471949-60471968 MsG0480021599.01.T01:CDS 35.0%
ACCCTTGTTCCAAAGATGAT+TGG - Chr4:60471953-60471972 None:intergenic 40.0%
ATGGATGAAGATGATGTCGT+AGG + Chr4:60472029-60472048 MsG0480021599.01.T01:CDS 40.0%
CACACAATTGTCACCATTGT+TGG + Chr4:60472107-60472126 MsG0480021599.01.T01:CDS 40.0%
GAGTCATTTGATCGACACTT+TGG - Chr4:60472304-60472323 None:intergenic 40.0%
GTCATTTGATCGACACTTTG+GGG - Chr4:60472302-60472321 None:intergenic 40.0%
GTTGTCGTCAAAAACCTTCT+TGG - Chr4:60472162-60472181 None:intergenic 40.0%
TCATTTGATCGACACTTTGG+GGG - Chr4:60472301-60472320 None:intergenic 40.0%
!! ACAATATAGAAGGCTTGCTG+AGG + Chr4:60472234-60472253 MsG0480021599.01.T01:CDS 40.0%
!! CAATATAGAAGGCTTGCTGA+GGG + Chr4:60472235-60472254 MsG0480021599.01.T01:CDS 40.0%
ATTGTTGGAAAGGGAGGACA+AGG + Chr4:60472122-60472141 MsG0480021599.01.T01:CDS 45.0%
CAACATGGAGAACCTTCGAA+AGG + Chr4:60471995-60472014 MsG0480021599.01.T01:intron 45.0%
CATTTGATCGACACTTTGGG+GGG - Chr4:60472300-60472319 None:intergenic 45.0%
CGAAGTGAGAAACTACTTGC+AGG + Chr4:60472340-60472359 MsG0480021599.01.T01:CDS 45.0%
TTGTCCTCCCTTTCCAACAA+TGG - Chr4:60472123-60472142 None:intergenic 45.0%
! ATTTGATCGACACTTTGGGG+GGG - Chr4:60472299-60472318 None:intergenic 45.0%
GTCACCATTGTTGGAAAGGG+AGG + Chr4:60472116-60472135 MsG0480021599.01.T01:CDS 50.0%
Chromosome Type Strat End Strand Name
Chr4 gene 60471913 60472490 60471913 ID=MsG0480021599.01;Name=MsG0480021599.01
Chr4 mRNA 60471913 60472490 60471913 ID=MsG0480021599.01.T01;Parent=MsG0480021599.01;Name=MsG0480021599.01.T01;_AED=0.38;_eAED=0.38;_QI=0|0|0|1|0|0|2|0|179
Chr4 exon 60472017 60472490 60472017 ID=MsG0480021599.01.T01:exon:8798;Parent=MsG0480021599.01.T01
Chr4 exon 60471913 60471978 60471913 ID=MsG0480021599.01.T01:exon:8797;Parent=MsG0480021599.01.T01
Chr4 CDS 60471913 60471978 60471913 ID=MsG0480021599.01.T01:cds;Parent=MsG0480021599.01.T01
Chr4 CDS 60472017 60472490 60472017 ID=MsG0480021599.01.T01:cds;Parent=MsG0480021599.01.T01
Gene Sequence

>MsG0480021599.01.T01

ATGAATGATGCAAGTGAAAAGAACATAGCTTCCATATCCAATCATCTTTGGAACAAGGGTCAAGCAGCTCAATTTTGTATGGATGAAGATGATGTCGTAGGCTTTGAAGTTCCAAGAGACATACTAATTGATTGGTTGGTAGAGGGAAGAGAAGCGCACACAATTGTCACCATTGTTGGAAAGGGAGGACAAGGAAAAACTACTCTTGCCAAGAAGGTTTTTGACGACAACAAGATCGTTAAACACTTTGATTGTCATGTATGGATCAGAGTGTCTCAATCATACAATATAGAAGGCTTGCTGAGGGACATGTTGCACAAGTTTTACGAACAACAAGGAGCAAATCCCCCCCAAAGTGTCGATCAAATGACTCAAGAGTCATTAGTTGTCGAAGTGAGAAACTACTTGCAGGAAAAAAGGTACGTTATCGTTTTTGATGATGTATGGAATTTACAATTTTGGGATGATATCAAACTTGCCATGATTGATAATAAAAAGGGCTGTAAGATATTAATCACACAAGAAACATTGATGTTGTAA

Protein sequence

>MsG0480021599.01.T01

MNDASEKNIASISNHLWNKGQAAQFCMDEDDVVGFEVPRDILIDWLVEGREAHTIVTIVGKGGQGKTTLAKKVFDDNKIVKHFDCHVWIRVSQSYNIEGLLRDMLHKFYEQQGANPPQSVDQMTQESLVVEVRNYLQEKRYVIVFDDVWNLQFWDDIKLAMIDNKKGCKILITQETLML*