AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880047714.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880047714.01.T01 MTR_4g133620 90.875 263 16 1 88 342 137 399 7.69e-164 463
MsG0880047714.01.T01 MTR_2g026080 64.516 279 87 4 71 339 124 400 9.00e-116 341
MsG0880047714.01.T01 MTR_7g051910 50.781 256 103 4 92 332 135 382 1.17e-72 230
MsG0880047714.01.T01 MTR_3g058510 36.207 290 158 8 50 324 100 377 2.75e-49 169
MsG0880047714.01.T01 MTR_5g097620 36.508 252 148 3 92 335 185 432 2.56e-48 168
MsG0880047714.01.T01 MTR_8g009880 35.686 255 154 3 92 340 147 397 5.30e-48 166
MsG0880047714.01.T01 MTR_5g093520 36.364 264 152 5 62 315 129 386 4.98e-46 162
MsG0880047714.01.T01 MTR_3g109050 70.787 89 25 1 1 88 129 217 8.94e-32 119
MsG0880047714.01.T01 MTR_4g009520 69.318 88 7 1 1 88 129 196 1.56e-31 118
MsG0880047714.01.T01 MTR_4g096800 68.182 88 11 1 1 88 200 270 7.15e-31 119
MsG0880047714.01.T01 MTR_7g018160 68.085 94 19 2 1 88 202 290 8.77e-30 115
MsG0880047714.01.T01 MTR_8g028075 38.650 163 91 3 152 314 400 553 3.12e-29 118
MsG0880047714.01.T01 MTR_3g101850 67.045 88 9 1 1 88 152 219 7.57e-29 111
MsG0880047714.01.T01 MTR_5g061500 67.045 88 14 1 1 88 417 489 4.17e-26 108
MsG0880047714.01.T01 MTR_5g032940 65.116 86 10 1 1 86 278 343 1.99e-25 105
MsG0880047714.01.T01 MTR_7g022020 63.636 88 15 1 1 88 530 600 1.77e-24 104
MsG0880047714.01.T01 MTR_2g064230 64.773 88 11 1 1 88 356 423 5.62e-24 102
MsG0880047714.01.T01 MTR_0134s0020 60.227 88 17 1 1 88 277 346 8.14e-24 100
MsG0880047714.01.T01 MTR_3g032450 56.842 95 14 3 1 88 1 75 2.17e-22 89.7
MsG0880047714.01.T01 MTR_6g029550 60.227 88 18 2 1 88 321 391 2.14e-21 94.4
MsG0880047714.01.T01 MTR_1g081340 61.364 88 17 2 1 88 334 404 4.44e-21 93.6
MsG0880047714.01.T01 MTR_7g117375 30.769 221 127 6 118 327 180 385 4.28e-20 90.9
MsG0880047714.01.T01 MTR_1g106700 57.955 88 14 2 1 88 165 229 5.25e-20 87.8
MsG0880047714.01.T01 MTR_7g046285 52.174 92 33 2 1 86 52 138 6.75e-20 85.1
MsG0880047714.01.T01 MTR_3g034020 56.180 89 12 3 1 82 358 426 3.32e-18 85.5
MsG0880047714.01.T01 MTR_8g039750 53.409 88 14 2 1 88 47 107 7.24e-18 79.7
MsG0880047714.01.T01 MTR_0196s0030 73.077 52 14 0 42 93 91 142 1.50e-17 82.4
MsG0880047714.01.T01 MTR_4g134740 46.809 94 39 2 1 88 25 113 1.53e-17 77.8
MsG0880047714.01.T01 MTR_1g093700 52.273 88 26 2 1 88 241 312 2.00e-17 82.0
MsG0880047714.01.T01 MTR_3g100990 53.191 94 33 2 1 88 412 500 2.07e-17 83.6
MsG0880047714.01.T01 MTR_8g036260 82.222 45 8 0 44 88 313 357 2.29e-17 82.4
MsG0880047714.01.T01 MTR_1g107470 65.152 66 12 2 1 60 311 371 1.20e-16 80.5
MsG0880047714.01.T01 MTR_0017s0290 90.476 42 4 0 47 88 369 410 1.71e-16 80.5
MsG0880047714.01.T01 MTR_6g044370 90.476 42 4 0 47 88 258 299 2.36e-16 79.0
MsG0880047714.01.T01 MTR_7g108380 45.455 88 33 2 1 88 4 76 3.32e-16 73.2
MsG0880047714.01.T01 MTR_5g464580 85.714 42 6 0 47 88 50 91 5.46e-16 72.8
MsG0880047714.01.T01 MTR_5g009440 88.095 42 5 0 47 88 125 166 5.55e-16 75.1
MsG0880047714.01.T01 MTR_8g023250 50.000 88 28 2 1 88 237 308 9.11e-16 77.4
MsG0880047714.01.T01 MTR_1g018670 48.913 92 34 3 3 88 10 94 1.29e-15 74.3
MsG0880047714.01.T01 MTR_8g039580 85.714 42 6 0 47 88 117 158 2.63e-15 73.2
MsG0880047714.01.T01 MTR_0025s0050 64.062 64 20 2 1 62 137 199 2.97e-15 73.9
MsG0880047714.01.T01 MTR_1g012040 88.095 42 5 0 47 88 436 477 5.15e-15 76.6
MsG0880047714.01.T01 MTR_1g047970 63.077 65 23 1 1 64 163 227 5.17e-15 76.6
MsG0880047714.01.T01 MTR_8g075630 62.295 61 22 1 1 60 145 205 7.86e-15 72.8
MsG0880047714.01.T01 MTR_0073s0030 62.295 61 22 1 1 60 145 205 8.34e-15 72.8
MsG0880047714.01.T01 MTR_1g067230 86.486 37 5 0 52 88 2 38 3.00e-14 67.0
MsG0880047714.01.T01 MTR_5g099270 93.548 31 2 0 1 31 7 37 6.20e-14 67.0
MsG0880047714.01.T01 MTR_2g064240 45.349 86 20 1 1 86 196 254 2.28e-13 69.7
MsG0880047714.01.T01 MTR_4g062370 45.455 88 33 2 1 88 651 723 1.60e-12 68.9
MsG0880047714.01.T01 MTR_5g064790 42.529 87 35 2 2 88 48 119 2.29e-12 63.9
MsG0880047714.01.T01 MTR_0550s0010 90.323 31 3 0 1 31 230 260 8.63e-12 65.1
MsG0880047714.01.T01 MTR_0022s0370 87.097 31 4 0 1 31 129 159 1.07e-11 63.2
MsG0880047714.01.T01 MTR_3g052540 71.429 42 12 0 47 88 242 283 1.09e-11 65.1
MsG0880047714.01.T01 MTR_2g058680 55.714 70 16 3 1 70 156 210 1.40e-11 63.5
MsG0880047714.01.T01 MTR_8g073690 47.692 65 31 1 27 88 1 65 1.52e-11 59.7
MsG0880047714.01.T01 MTR_8g466670 45.122 82 41 1 9 90 93 170 3.58e-11 62.0
MsG0880047714.01.T01 MTR_6g069780 39.773 88 37 2 1 88 18 89 5.04e-11 58.9
MsG0880047714.01.T01 MTR_2g065670 48.193 83 30 2 6 88 266 335 5.69e-11 64.3
MsG0880047714.01.T01 MTR_8g085330 38.202 89 37 2 1 88 196 267 7.38e-11 62.4
MsG0880047714.01.T01 MTR_5g087830 43.373 83 33 2 6 88 183 251 7.93e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880047714.01.T01 AT4G17280 47.475 297 127 7 49 329 107 390 1.77e-79 248
MsG0880047714.01.T01 AT5G47530 50.385 260 105 5 88 331 135 386 1.20e-78 246
MsG0880047714.01.T01 AT3G25290 49.004 251 107 5 87 321 138 383 7.85e-74 233
MsG0880047714.01.T01 AT3G25290 49.004 251 107 5 87 321 138 383 7.85e-74 233
MsG0880047714.01.T01 AT5G35735 46.269 268 118 5 89 338 139 398 8.94e-73 231
MsG0880047714.01.T01 AT4G12980 45.669 254 117 3 88 325 140 388 2.22e-72 230
MsG0880047714.01.T01 AT2G04850 35.644 303 174 6 50 335 99 397 1.79e-48 168
MsG0880047714.01.T01 AT3G59070 37.132 272 151 6 49 310 111 372 7.41e-46 162
MsG0880047714.01.T01 AT3G07570 35.119 168 101 2 143 310 203 362 1.92e-28 114
MsG0880047714.01.T01 AT3G61750 39.860 143 78 4 153 295 143 277 3.59e-27 109
MsG0880047714.01.T01 AT3G61750 39.860 143 78 4 153 295 220 354 8.27e-27 109
MsG0880047714.01.T01 AT5G48750 39.640 111 58 2 89 190 144 254 1.79e-18 84.0
MsG0880047714.01.T01 AT3G51700 45.055 91 38 3 5 88 245 330 7.05e-14 72.0
MsG0880047714.01.T01 AT3G51690 43.678 87 37 3 9 88 245 326 7.58e-13 68.9

Find 92 sgRNAs with CRISPR-Local

Find 370 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTAGACCCCTTTGTATATTT+TGG 0.071146 8:-89909791 MsG0880047714.01.T01:three_prime_UTR
CATGCTTACATTGGTATTAT+TGG 0.155934 8:-89910017 MsG0880047714.01.T01:CDS
CTATACTTACTATGGCTTAA+AGG 0.171632 8:+89909871 None:intergenic
GCCTACATAGTTGGATTATC+TGG 0.214774 8:-89910308 MsG0880047714.01.T01:CDS
CATTGGTATTATTGGTGCTT+TGG 0.218211 8:-89910009 MsG0880047714.01.T01:CDS
CCAAGACTTCCTTAGAGTTT+TGG 0.257990 8:+89911064 None:intergenic
GTTTGTAATGCTAATGCTTA+TGG 0.273236 8:+89910100 None:intergenic
ATTGGTATTATTGGTGCTTT+GGG 0.280623 8:-89910008 MsG0880047714.01.T01:CDS
GAACAATAGCAAGTGCTCTA+TGG 0.301053 8:+89910231 None:intergenic
CATCATTCCTATACTTACTA+TGG 0.303608 8:+89909863 None:intergenic
TCCAAATGGAACAACCTCTT+TGG 0.315874 8:-89911157 MsG0880047714.01.T01:CDS
AAGACTTCAGATGGTGTTAA+TGG 0.319234 8:-89909918 MsG0880047714.01.T01:CDS
TATACTTACTATGGCTTAAA+GGG 0.330924 8:+89909872 None:intergenic
ATAGTTGGATTATCTGGTTT+TGG 0.338557 8:-89910302 MsG0880047714.01.T01:CDS
CTCAACTTATGGTCTTTGTT+TGG 0.344950 8:+89910164 None:intergenic
TCCAGTAAAATCTCAACTTA+TGG 0.345086 8:+89910153 None:intergenic
ACCAAAGAGGTTGTTCCATT+TGG 0.348727 8:+89911156 None:intergenic
CAGGACTACCCTTCAAATTC+AGG 0.351441 8:-89913905 MsG0880047714.01.T01:CDS
TAGGGGATCGTTACAAGAAC+TGG 0.360418 8:-89910043 MsG0880047714.01.T01:CDS
AGAGTTGTCCATCCGTGAAC+AGG 0.378709 8:+89913790 None:intergenic
ACCAATCCCACTTGCAGCTT+GGG 0.378912 8:+89911024 None:intergenic
CAAGTCTCTGCCTACATAGT+TGG 0.397780 8:-89910317 MsG0880047714.01.T01:CDS
AATATCTACCACCACGTTGT+AGG 0.399297 8:-89910131 MsG0880047714.01.T01:CDS
TTTCAAAGGGTTTGAAGCAT+TGG 0.401125 8:-89910075 MsG0880047714.01.T01:CDS
TGGTTCATGTATGGCAAGAT+GGG 0.403428 8:-89911137 MsG0880047714.01.T01:CDS
TTGGTTCATGTATGGCAAGA+TGG 0.409548 8:-89911138 MsG0880047714.01.T01:CDS
ATCTTCTCACCAAAACTCTA+AGG 0.410472 8:-89911073 MsG0880047714.01.T01:CDS
TTCAAAGGGTTTGAAGCATT+GGG 0.410583 8:-89910074 MsG0880047714.01.T01:CDS
CAACCTCTTTGGTTCATGTA+TGG 0.419802 8:-89911146 MsG0880047714.01.T01:CDS
AGTTCTAAATGCAATAAGTT+GGG 0.423172 8:-89910432 MsG0880047714.01.T01:CDS
TGCTATTGTTCTTGTAACCT+TGG 0.433426 8:-89910219 MsG0880047714.01.T01:CDS
CCAAAACTCTAAGGAAGTCT+TGG 0.434557 8:-89911064 MsG0880047714.01.T01:CDS
TCTCGAGTTAATTCTAGAAA+AGG 0.443588 8:-89913756 MsG0880047714.01.T01:CDS
TGGGGAATCTTGATGCCAAC+AGG 0.450699 8:-89910413 MsG0880047714.01.T01:CDS
AGGTTTGAAGCTGCTCATCT+TGG 0.454795 8:-89913736 MsG0880047714.01.T01:CDS
ATTGCAAAACAAAGTGTCAA+TGG 0.458514 8:+89913870 None:intergenic
TGGTATTATTGGTGCTTTGG+GGG 0.460113 8:-89910006 MsG0880047714.01.T01:CDS
TTGTCTGCGCCTGAATTTGA+AGG 0.460818 8:+89913896 None:intergenic
GTCCATCCGTGAACAGGGTT+AGG 0.463273 8:+89913796 None:intergenic
TTCACGATACACAACATTTG+TGG 0.465649 8:+89913686 None:intergenic
GCTACTTTGACCCTTCCAAA+TGG 0.468426 8:-89911171 MsG0880047714.01.T01:CDS
TCCCAAGCTGCAAGTGGGAT+TGG 0.471818 8:-89911025 MsG0880047714.01.T01:intron
AACCAATCCCACTTGCAGCT+TGG 0.473554 8:+89911023 None:intergenic
CTTTAAGCCATAGTAAGTAT+AGG 0.474144 8:-89909870 MsG0880047714.01.T01:exon
GATGGTGTTAATGGAGCAAA+TGG 0.483049 8:-89909909 MsG0880047714.01.T01:CDS
TATCTTCCTAACCCTGTTCA+CGG 0.485334 8:-89913802 MsG0880047714.01.T01:CDS
ATATCTACCACCACGTTGTA+GGG 0.487362 8:-89910130 MsG0880047714.01.T01:CDS
AATCTTATTCTGAGTGATCC+AGG 0.488152 8:-89913924 MsG0880047714.01.T01:CDS
AACAATAGCAAGTGCTCTAT+GGG 0.489652 8:+89910232 None:intergenic
GGTATTATTGGTGCTTTGGG+GGG 0.491041 8:-89910005 MsG0880047714.01.T01:CDS
TCAAATCCGCAGACCCTGCT+TGG 0.493088 8:-89910361 MsG0880047714.01.T01:CDS
AAGAGGTTGTTCCATTTGGA+AGG 0.497441 8:+89911160 None:intergenic
GAGTTCTAAATGCAATAAGT+TGG 0.504686 8:-89910433 MsG0880047714.01.T01:CDS
AGTAATAGCAAGGTATTTGA+AGG 0.512011 8:-89910387 MsG0880047714.01.T01:CDS
TAGTACCCAAAATATACAAA+GGG 0.515115 8:+89909785 None:intergenic
TTGGTATTATTGGTGCTTTG+GGG 0.518620 8:-89910007 MsG0880047714.01.T01:CDS
ATGTGAAGATAGAACCAAGC+AGG 0.523540 8:+89910347 None:intergenic
TTTGGTACTGGTCTCAAACT+CGG 0.532870 8:-89910284 MsG0880047714.01.T01:CDS
TTTGGAAGCTTACACGTGGA+TGG 0.533911 8:-89909970 MsG0880047714.01.T01:CDS
CTGAATTTGAAGGGTAGTCC+TGG 0.543214 8:+89913906 None:intergenic
TCCACGTGTAAGCTTCCAAA+AGG 0.545026 8:+89909973 None:intergenic
TTCCTAACCCTGTTCACGGA+TGG 0.549213 8:-89913798 MsG0880047714.01.T01:CDS
TGAAGATAATAATGTTTGCA+AGG 0.551885 8:-89913712 MsG0880047714.01.T01:CDS
CTTGCTATTACTGCTCCTGT+TGG 0.560569 8:+89910398 None:intergenic
GATTCATGGCTATGTTCTTG+AGG 0.562296 8:+89911093 None:intergenic
TGGTCAATCTTTATCTCGAG+TGG 0.565669 8:-89913830 MsG0880047714.01.T01:CDS
AACTGGAAGCATGCTTACAT+TGG 0.570819 8:-89910026 MsG0880047714.01.T01:CDS
GGTTCATGTATGGCAAGATG+GGG 0.572736 8:-89911136 MsG0880047714.01.T01:CDS
ACCAGATAATCCAACTATGT+AGG 0.573850 8:+89910307 None:intergenic
GTTCTAAATGCAATAAGTTG+GGG 0.579470 8:-89910431 MsG0880047714.01.T01:CDS
AGAGGTTGTTCCATTTGGAA+GGG 0.580852 8:+89911161 None:intergenic
ATAGTACCCAAAATATACAA+AGG 0.581790 8:+89909784 None:intergenic
GCAGAGAACAAGACTTCAGA+TGG 0.581792 8:-89909927 MsG0880047714.01.T01:CDS
CAAACTCGGTAGTGATTCAG+AGG 0.584270 8:-89910270 MsG0880047714.01.T01:CDS
AATCCCACTTGCAGCTTGGG+AGG 0.599310 8:+89911027 None:intergenic
AATGACAATAAATAAAGTCA+TGG 0.602755 8:-89913850 MsG0880047714.01.T01:CDS
GGTACCTCCCAAGCTGCAAG+TGG 0.604136 8:-89911031 MsG0880047714.01.T01:CDS
TGTCTGCGCCTGAATTTGAA+GGG 0.617203 8:+89913897 None:intergenic
GTTAATGGAGCAAATGGCTA+TGG 0.624982 8:-89909903 MsG0880047714.01.T01:CDS
GGTCAATCTTTATCTCGAGT+GGG 0.625412 8:-89913829 MsG0880047714.01.T01:CDS
AAACACTTGAAGAGTTGCCA+AGG 0.625483 8:+89910202 None:intergenic
TTGCCATACATGAACCAAAG+AGG 0.632447 8:+89911143 None:intergenic
CAACAGGAGCAGTAATAGCA+AGG 0.639419 8:-89910397 MsG0880047714.01.T01:CDS
GAGTTGTCCATCCGTGAACA+GGG 0.651029 8:+89913791 None:intergenic
TGTGAAGATAGAACCAAGCA+GGG 0.656540 8:+89910348 None:intergenic
ATAGAACCAAGCAGGGTCTG+CGG 0.662307 8:+89910355 None:intergenic
GTACCTCCCAAGCTGCAAGT+GGG 0.668450 8:-89911030 MsG0880047714.01.T01:CDS
TGCCACGTATCAGAATAATG+AGG 0.677711 8:-89911205 MsG0880047714.01.T01:intron
AAACTCGGTAGTGATTCAGA+GGG 0.706199 8:-89910269 MsG0880047714.01.T01:CDS
AGTACCCAAAATATACAAAG+GGG 0.710749 8:+89909786 None:intergenic
TAACATACCCTACAACGTGG+TGG 0.753877 8:+89910123 None:intergenic
TGGTAACATACCCTACAACG+TGG 0.797593 8:+89910120 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAATATATTAAAATAGGT+TGG + Chr8:89910352-89910371 None:intergenic 10.0%
!! GAGTAATAATATATTAAAAT+AGG + Chr8:89910356-89910375 None:intergenic 10.0%
!!! ATAAACAAAATTTTAAAAAG+CGG + Chr8:89910301-89910320 None:intergenic 10.0%
!!! TAATTTTTAAATAAAGTTCT+AGG + Chr8:89912839-89912858 None:intergenic 10.0%
!!! TATCTTAAAATTTTAATCAA+GGG - Chr8:89911618-89911637 MsG0880047714.01.T01:intron 10.0%
!!! TTATCTTAAAATTTTAATCA+AGG - Chr8:89911617-89911636 MsG0880047714.01.T01:intron 10.0%
!!! TTTTTTTTAATTTCTTTGTA+AGG - Chr8:89909976-89909995 MsG0880047714.01.T01:CDS 10.0%
!! GTTATAATTCAAATTTGATA+TGG + Chr8:89910977-89910996 None:intergenic 15.0%
!! GTTATCTTAAAGTTATAAAT+GGG + Chr8:89911000-89911019 None:intergenic 15.0%
!! TGTTATCTTAAAGTTATAAA+TGG + Chr8:89911001-89911020 None:intergenic 15.0%
!! TTATCTTAAAGTTATAAATG+GGG + Chr8:89910999-89911018 None:intergenic 15.0%
!! TTATGTAAATTCTTCAATAT+GGG + Chr8:89911895-89911914 None:intergenic 15.0%
!! TTATTTATTATATGAAGAGT+TGG + Chr8:89911738-89911757 None:intergenic 15.0%
!! TTTATGTAAATTCTTCAATA+TGG + Chr8:89911896-89911915 None:intergenic 15.0%
!!! CTAGTAAATATTGTATTTTA+GGG + Chr8:89910123-89910142 None:intergenic 15.0%
!!! TAAACAAAATTTTAAAAAGC+GGG + Chr8:89910300-89910319 None:intergenic 15.0%
!!! TATAAAAAATAAAGTTTTCG+CGG - Chr8:89910501-89910520 MsG0880047714.01.T01:intron 15.0%
!!! TCTAGTAAATATTGTATTTT+AGG + Chr8:89910124-89910143 None:intergenic 15.0%
!!! TTTTATTTTATGATGATTAG+TGG - Chr8:89911587-89911606 MsG0880047714.01.T01:intron 15.0%
!! AATACAATATTTACTAGACA+TGG - Chr8:89910126-89910145 MsG0880047714.01.T01:CDS 20.0%
!! AATATACCCGTAAAAATTAA+CGG - Chr8:89910671-89910690 MsG0880047714.01.T01:intron 20.0%
!! AATGACAATAAATAAAGTCA+TGG - Chr8:89909700-89909719 MsG0880047714.01.T01:three_prime_UTR 20.0%
!! ATAATAGTTCAAACTATTTG+CGG - Chr8:89911083-89911102 MsG0880047714.01.T01:CDS 20.0%
!! CAAATATTTATAATGATCCA+CGG + Chr8:89912636-89912655 None:intergenic 20.0%
!! CACGACATAATTTATAAAAT+TGG + Chr8:89913014-89913033 None:intergenic 20.0%
!! GTGTTAGTACTTTATAATTA+GGG - Chr8:89913031-89913050 MsG0880047714.01.T01:intron 20.0%
!! TAGTTTAATACAATATGAGA+GGG + Chr8:89911780-89911799 None:intergenic 20.0%
!! TTAGTTTAATACAATATGAG+AGG + Chr8:89911781-89911800 None:intergenic 20.0%
!!! AAACTAATGTACTGATATTT+TGG + Chr8:89911197-89911216 None:intergenic 20.0%
!!! ATAAAAAATAAAGTTTTCGC+GGG - Chr8:89910502-89910521 MsG0880047714.01.T01:intron 20.0%
! AACAGGATAATACAATCATA+TGG + Chr8:89912886-89912905 None:intergenic 25.0%
! AATTTACATAAAGCAAGAGA+AGG - Chr8:89911904-89911923 MsG0880047714.01.T01:intron 25.0%
! ACTCTCTATTATCAAGAATT+TGG + Chr8:89912760-89912779 None:intergenic 25.0%
! ATAGTACCCAAAATATACAA+AGG + Chr8:89913769-89913788 None:intergenic 25.0%
! ATATACCCGTAAAAATTAAC+GGG - Chr8:89910672-89910691 MsG0880047714.01.T01:intron 25.0%
! CGTGTTAGTACTTTATAATT+AGG - Chr8:89913030-89913049 MsG0880047714.01.T01:intron 25.0%
! GTATATTGCTCATTCAAAAA+CGG - Chr8:89911159-89911178 MsG0880047714.01.T01:CDS 25.0%
! TAATAGTTCAAACTATTTGC+GGG - Chr8:89911084-89911103 MsG0880047714.01.T01:CDS 25.0%
! TAGTACCCAAAATATACAAA+GGG + Chr8:89913768-89913787 None:intergenic 25.0%
! TATACTTACTATGGCTTAAA+GGG + Chr8:89913681-89913700 None:intergenic 25.0%
! TATGATTGTATTATCCTGTT+TGG - Chr8:89912886-89912905 MsG0880047714.01.T01:intron 25.0%
! TGAAGATAATAATGTTTGCA+AGG - Chr8:89909838-89909857 MsG0880047714.01.T01:three_prime_UTR 25.0%
! TTCTCAAAAACCCATTAATT+TGG - Chr8:89911859-89911878 MsG0880047714.01.T01:intron 25.0%
! TTTATTATATGAAGAGTTGG+TGG + Chr8:89911735-89911754 None:intergenic 25.0%
!! AATGAACCCGTTAATTTTTA+CGG + Chr8:89910681-89910700 None:intergenic 25.0%
!! AATGTTGAAGTATATGCTTT+TGG + Chr8:89912266-89912285 None:intergenic 25.0%
!! ATGTTGAAGTATATGCTTTT+GGG + Chr8:89912265-89912284 None:intergenic 25.0%
!! ATTCTTAATTTTCAGACACA+TGG - Chr8:89913095-89913114 MsG0880047714.01.T01:intron 25.0%
!! TGCACTAAGATTAAAGTATT+TGG + Chr8:89910897-89910916 None:intergenic 25.0%
!! TGTAAGTTCATACTGTTTTA+AGG - Chr8:89912569-89912588 MsG0880047714.01.T01:intron 25.0%
!! TTATTATATGAAGAGTTGGT+GGG + Chr8:89911734-89911753 None:intergenic 25.0%
!! TTTGTTAACAAAGTCTTTTG+TGG + Chr8:89911336-89911355 None:intergenic 25.0%
!!! AAAATTTGGAGTTTTAGTAC+GGG - Chr8:89910234-89910253 MsG0880047714.01.T01:CDS 25.0%
!!! AATGTTTGGTTTTACATGAT+TGG + Chr8:89912017-89912036 None:intergenic 25.0%
!!! AGTTCTAAATGCAATAAGTT+GGG - Chr8:89913118-89913137 MsG0880047714.01.T01:intron 25.0%
!!! ATGTTTGGTTTTACATGATT+GGG + Chr8:89912016-89912035 None:intergenic 25.0%
!!! CGTATGTATATTGTTATTTG+TGG + Chr8:89910792-89910811 None:intergenic 25.0%
!!! GAAAATTTGGAGTTTTAGTA+CGG - Chr8:89910233-89910252 MsG0880047714.01.T01:CDS 25.0%
!!! GGTTTTTGAGAAAATTCAAA+GGG + Chr8:89911851-89911870 None:intergenic 25.0%
AACTAAAGTTGCGTATTGTT+TGG - Chr8:89909947-89909966 MsG0880047714.01.T01:CDS 30.0%
AATAACTGCAACAAATAGGT+GGG - Chr8:89912151-89912170 MsG0880047714.01.T01:intron 30.0%
AGTACCCAAAATATACAAAG+GGG + Chr8:89913767-89913786 None:intergenic 30.0%
AGTGCATCAATAAAAGTCAA+TGG + Chr8:89910052-89910071 None:intergenic 30.0%
ATCATTATGTGTTTCGATTG+TGG - Chr8:89912780-89912799 MsG0880047714.01.T01:intron 30.0%
CATCAATAAAAGTCAATGGT+AGG + Chr8:89910048-89910067 None:intergenic 30.0%
CATCATTCCTATACTTACTA+TGG + Chr8:89913690-89913709 None:intergenic 30.0%
CATGCTTACATTGGTATTAT+TGG - Chr8:89913533-89913552 MsG0880047714.01.T01:intron 30.0%
CTATACTTACTATGGCTTAA+AGG + Chr8:89913682-89913701 None:intergenic 30.0%
CTTTAAGCCATAGTAAGTAT+AGG - Chr8:89913680-89913699 MsG0880047714.01.T01:intron 30.0%
GTTTGTAATGCTAATGCTTA+TGG + Chr8:89913453-89913472 None:intergenic 30.0%
TAGTGTTATGACTTATGACA+CGG - Chr8:89911555-89911574 MsG0880047714.01.T01:intron 30.0%
TCCAGTAAAATCTCAACTTA+TGG + Chr8:89913400-89913419 None:intergenic 30.0%
TGGTCATAATGTAATTGCAT+AGG - Chr8:89912800-89912819 MsG0880047714.01.T01:intron 30.0%
! ACACCTCAAATTTAAAGTGT+CGG + Chr8:89912925-89912944 None:intergenic 30.0%
! AGAATTTTTACACAAAACCG+TGG - Chr8:89912616-89912635 MsG0880047714.01.T01:intron 30.0%
! AGCATTACAAACGTTTTCAA+AGG - Chr8:89913461-89913480 MsG0880047714.01.T01:intron 30.0%
! AGTAATAGCAAGGTATTTGA+AGG - Chr8:89913163-89913182 MsG0880047714.01.T01:intron 30.0%
! ATGAACCCGTTAATTTTTAC+GGG + Chr8:89910680-89910699 None:intergenic 30.0%
! ATTGCAAAACAAAGTGTCAA+TGG + Chr8:89909683-89909702 None:intergenic 30.0%
! ATTGGTATTATTGGTGCTTT+GGG - Chr8:89913542-89913561 MsG0880047714.01.T01:intron 30.0%
! CTTTTATTGATGCACTTTTC+AGG - Chr8:89910056-89910075 MsG0880047714.01.T01:CDS 30.0%
! GCATTACAAACGTTTTCAAA+GGG - Chr8:89913462-89913481 MsG0880047714.01.T01:intron 30.0%
! GTTCTAAATGCAATAAGTTG+GGG - Chr8:89913119-89913138 MsG0880047714.01.T01:intron 30.0%
! TAACAAAGTCTTTTGTGGAT+CGG + Chr8:89911331-89911350 None:intergenic 30.0%
! TAGACCCCTTTGTATATTTT+GGG - Chr8:89913760-89913779 MsG0880047714.01.T01:CDS 30.0%
! TCTCGAGTTAATTCTAGAAA+AGG - Chr8:89909794-89909813 MsG0880047714.01.T01:three_prime_UTR 30.0%
! TTAGACCCCTTTGTATATTT+TGG - Chr8:89913759-89913778 MsG0880047714.01.T01:CDS 30.0%
!! AAAATTTTAAAAAGCGGGTG+CGG + Chr8:89910295-89910314 None:intergenic 30.0%
!! AAAGTTCTAGGATTGTGATA+TGG + Chr8:89912827-89912846 None:intergenic 30.0%
!! AAATTTGGAGTTTTAGTACG+GGG - Chr8:89910235-89910254 MsG0880047714.01.T01:CDS 30.0%
!! ACCATAAGTTGAGATTTTAC+TGG - Chr8:89913396-89913415 MsG0880047714.01.T01:intron 30.0%
!! ATAGTTGGATTATCTGGTTT+TGG - Chr8:89913248-89913267 MsG0880047714.01.T01:intron 30.0%
!! CTTTGTTGTTTGAGAATGTT+TGG + Chr8:89912031-89912050 None:intergenic 30.0%
!! GAGTTCTAAATGCAATAAGT+TGG - Chr8:89913117-89913136 MsG0880047714.01.T01:intron 30.0%
!! GGGTTTTTGAGAAAATTCAA+AGG + Chr8:89911852-89911871 None:intergenic 30.0%
!! TATTATATGAAGAGTTGGTG+GGG + Chr8:89911733-89911752 None:intergenic 30.0%
!! TCACAGGATACTTACTTTTA+GGG - Chr8:89913835-89913854 MsG0880047714.01.T01:CDS 30.0%
!! TTAAAATAGGTTGGTGCTTA+TGG + Chr8:89910343-89910362 None:intergenic 30.0%
!! TTCACAGGATACTTACTTTT+AGG - Chr8:89913834-89913853 MsG0880047714.01.T01:CDS 30.0%
!! TTGCTTTTGGCCAAATTAAT+GGG + Chr8:89911872-89911891 None:intergenic 30.0%
!!! AAGTGTTTGCTCTATTTTTG+AGG - Chr8:89913363-89913382 MsG0880047714.01.T01:intron 30.0%
!!! ACACTAGTTGTTTTTTTGTG+AGG + Chr8:89911541-89911560 None:intergenic 30.0%
!!! AGTCTTAGTTTTGACTTTTG+AGG - Chr8:89913804-89913823 MsG0880047714.01.T01:CDS 30.0%
!!! CACTAGTTGTTTTTTTGTGA+GGG + Chr8:89911540-89911559 None:intergenic 30.0%
!!! TTTTCAGGTATAACAATACG+CGG - Chr8:89910071-89910090 MsG0880047714.01.T01:CDS 30.0%
!!! TTTTGAGGTAATTCTTTCAC+AGG - Chr8:89913819-89913838 MsG0880047714.01.T01:CDS 30.0%
AACAATAGCAAGTGCTCTAT+GGG + Chr8:89913321-89913340 None:intergenic 35.0%
AACCTCATTATTCTGATACG+TGG + Chr8:89912350-89912369 None:intergenic 35.0%
AATCTTATTCTGAGTGATCC+AGG - Chr8:89909626-89909645 MsG0880047714.01.T01:three_prime_UTR 35.0%
AATTTCTTTGTAAGGCGTAC+TGG - Chr8:89909984-89910003 MsG0880047714.01.T01:CDS 35.0%
ACACCGACACTTTAAATTTG+AGG - Chr8:89912919-89912938 MsG0880047714.01.T01:intron 35.0%
ACCAGAAACAGGATAACTAA+TGG + Chr8:89912320-89912339 None:intergenic 35.0%
ACCAGATAATCCAACTATGT+AGG + Chr8:89913246-89913265 None:intergenic 35.0%
ATCTTCTCACCAAAACTCTA+AGG - Chr8:89912477-89912496 MsG0880047714.01.T01:intron 35.0%
CAACTTGGTACTTACATATG+TGG - Chr8:89912985-89913004 MsG0880047714.01.T01:intron 35.0%
CAATAAAAGTCAATGGTAGG+AGG + Chr8:89910045-89910064 None:intergenic 35.0%
CACATATGTAAGTACCAAGT+TGG + Chr8:89912987-89913006 None:intergenic 35.0%
CTCAACTTATGGTCTTTGTT+TGG + Chr8:89913389-89913408 None:intergenic 35.0%
CTGGAATAACTGCAACAAAT+AGG - Chr8:89912147-89912166 MsG0880047714.01.T01:intron 35.0%
GAATAACTGCAACAAATAGG+TGG - Chr8:89912150-89912169 MsG0880047714.01.T01:intron 35.0%
TATGCTACTCAAAACACACA+AGG + Chr8:89911971-89911990 None:intergenic 35.0%
TCCATTAGTTATCCTGTTTC+TGG - Chr8:89912316-89912335 MsG0880047714.01.T01:intron 35.0%
TGCTATTGTTCTTGTAACCT+TGG - Chr8:89913331-89913350 MsG0880047714.01.T01:intron 35.0%
TTACATAAAGCAAGAGAAGG+AGG - Chr8:89911907-89911926 MsG0880047714.01.T01:intron 35.0%
TTCACGATACACAACATTTG+TGG + Chr8:89909867-89909886 None:intergenic 35.0%
! AAAAATAAAGTTTTCGCGGG+TGG - Chr8:89910505-89910524 MsG0880047714.01.T01:intron 35.0%
! AAAATAAAGTTTTCGCGGGT+GGG - Chr8:89910506-89910525 MsG0880047714.01.T01:intron 35.0%
! AACAAAGTCTTTTGTGGATC+GGG + Chr8:89911330-89911349 None:intergenic 35.0%
! AAGACTTCAGATGGTGTTAA+TGG - Chr8:89913632-89913651 MsG0880047714.01.T01:intron 35.0%
! CATTGGTATTATTGGTGCTT+TGG - Chr8:89913541-89913560 MsG0880047714.01.T01:intron 35.0%
! TTCAAAGGGTTTGAAGCATT+GGG - Chr8:89913476-89913495 MsG0880047714.01.T01:intron 35.0%
! TTCAATTTTTACCCCCGATA+TGG - Chr8:89910578-89910597 MsG0880047714.01.T01:intron 35.0%
! TTGGTATTATTGGTGCTTTG+GGG - Chr8:89913543-89913562 MsG0880047714.01.T01:intron 35.0%
! TTTCAAAGGGTTTGAAGCAT+TGG - Chr8:89913475-89913494 MsG0880047714.01.T01:intron 35.0%
!! AAATTTTAAAAAGCGGGTGC+GGG + Chr8:89910294-89910313 None:intergenic 35.0%
!! AATTTGGAGTTTTAGTACGG+GGG - Chr8:89910236-89910255 MsG0880047714.01.T01:CDS 35.0%
!! AGTTTTGGTGAGAAGATTCA+TGG + Chr8:89912474-89912493 None:intergenic 35.0%
!! ATTTTAGCACCATCATGTTG+AGG - Chr8:89911935-89911954 MsG0880047714.01.T01:intron 35.0%
!! CACAGGATACTTACTTTTAG+GGG - Chr8:89913836-89913855 MsG0880047714.01.T01:CDS 35.0%
!! TCTTCAATATGGGTTGCTTT+TGG + Chr8:89911885-89911904 None:intergenic 35.0%
!!! AAGCATTGGGAGATTTTGTA+GGG - Chr8:89913489-89913508 MsG0880047714.01.T01:intron 35.0%
!!! GTTGCTTTTGGCCAAATTAA+TGG + Chr8:89911873-89911892 None:intergenic 35.0%
AAACACTTGAAGAGTTGCCA+AGG + Chr8:89913351-89913370 None:intergenic 40.0%
AAACTCGGTAGTGATTCAGA+GGG - Chr8:89913281-89913300 MsG0880047714.01.T01:intron 40.0%
AAGAGGTTGTTCCATTTGGA+AGG + Chr8:89912393-89912412 None:intergenic 40.0%
AATATCTACCACCACGTTGT+AGG - Chr8:89913419-89913438 MsG0880047714.01.T01:intron 40.0%
ACATTGTAGACACAAGCACA+CGG - Chr8:89912281-89912300 MsG0880047714.01.T01:intron 40.0%
ACCAAAGAGGTTGTTCCATT+TGG + Chr8:89912397-89912416 None:intergenic 40.0%
AGAGAAGAAGAGGTAAGAGA+AGG + Chr8:89911682-89911701 None:intergenic 40.0%
AGAGGTTGTTCCATTTGGAA+GGG + Chr8:89912392-89912411 None:intergenic 40.0%
ATACAATATGAGAGGGACAG+AGG + Chr8:89911773-89911792 None:intergenic 40.0%
ATATCTACCACCACGTTGTA+GGG - Chr8:89913420-89913439 MsG0880047714.01.T01:intron 40.0%
ATGTGAAGATAGAACCAAGC+AGG + Chr8:89913206-89913225 None:intergenic 40.0%
GAACAATAGCAAGTGCTCTA+TGG + Chr8:89913322-89913341 None:intergenic 40.0%
GACATAGCATACATACACAC+TGG - Chr8:89912128-89912147 MsG0880047714.01.T01:intron 40.0%
GATTCATGGCTATGTTCTTG+AGG + Chr8:89912460-89912479 None:intergenic 40.0%
GCATCTCGGGATACAAAATT+CGG - Chr8:89911429-89911448 MsG0880047714.01.T01:intron 40.0%
GCCTACATAGTTGGATTATC+TGG - Chr8:89913242-89913261 MsG0880047714.01.T01:intron 40.0%
GGGTATATTAGACATCGCAA+CGG + Chr8:89910660-89910679 None:intergenic 40.0%
GGTATATTAGACATCGCAAC+GGG + Chr8:89910659-89910678 None:intergenic 40.0%
GGTCAATCTTTATCTCGAGT+GGG - Chr8:89909721-89909740 MsG0880047714.01.T01:three_prime_UTR 40.0%
GTATATTAGACATCGCAACG+GGG + Chr8:89910658-89910677 None:intergenic 40.0%
GTTAATGGAGCAAATGGCTA+TGG - Chr8:89913647-89913666 MsG0880047714.01.T01:intron 40.0%
GTTCAAACTATTTGCGGGAA+TGG - Chr8:89911089-89911108 MsG0880047714.01.T01:CDS 40.0%
TACATTCCCGAGAAAAACCT+CGG + Chr8:89911306-89911325 None:intergenic 40.0%
TATCTTCCTAACCCTGTTCA+CGG - Chr8:89909748-89909767 MsG0880047714.01.T01:three_prime_UTR 40.0%
TCCAAATGGAACAACCTCTT+TGG - Chr8:89912393-89912412 MsG0880047714.01.T01:intron 40.0%
TGCCACGTATCAGAATAATG+AGG - Chr8:89912345-89912364 MsG0880047714.01.T01:intron 40.0%
TGGTCAATCTTTATCTCGAG+TGG - Chr8:89909720-89909739 MsG0880047714.01.T01:three_prime_UTR 40.0%
TGGTCATACGATGAAACAAG+TGG - Chr8:89912098-89912117 MsG0880047714.01.T01:intron 40.0%
TGGTTCATGTATGGCAAGAT+GGG - Chr8:89912413-89912432 MsG0880047714.01.T01:intron 40.0%
TGGTTGTTGATGTGGAATGA+GGG + Chr8:89911709-89911728 None:intergenic 40.0%
TGTGAAGATAGAACCAAGCA+GGG + Chr8:89913205-89913224 None:intergenic 40.0%
TTGCCATACATGAACCAAAG+AGG + Chr8:89912410-89912429 None:intergenic 40.0%
TTGGTTCATGTATGGCAAGA+TGG - Chr8:89912412-89912431 MsG0880047714.01.T01:intron 40.0%
TTGGTTGTTGATGTGGAATG+AGG + Chr8:89911710-89911729 None:intergenic 40.0%
TTGTTTCATCGTATGACCAG+TGG + Chr8:89912097-89912116 None:intergenic 40.0%
! AAATAAAGTTTTCGCGGGTG+GGG - Chr8:89910507-89910526 MsG0880047714.01.T01:intron 40.0%
! AACTGGAAGCATGCTTACAT+TGG - Chr8:89913524-89913543 MsG0880047714.01.T01:intron 40.0%
! AGGGACGATTCTTGTTTGAT+TGG - Chr8:89913050-89913069 MsG0880047714.01.T01:intron 40.0%
! ATACATCCCGAGGTTTTTCT+CGG - Chr8:89911296-89911315 MsG0880047714.01.T01:intron 40.0%
! ATTTTTACCCCCGATATGGT+TGG - Chr8:89910582-89910601 MsG0880047714.01.T01:intron 40.0%
! CAACCTCTTTGGTTCATGTA+TGG - Chr8:89912404-89912423 MsG0880047714.01.T01:intron 40.0%
! CCAAAACTCTAAGGAAGTCT+TGG - Chr8:89912486-89912505 MsG0880047714.01.T01:intron 40.0%
! CCAAGACTTCCTTAGAGTTT+TGG + Chr8:89912489-89912508 None:intergenic 40.0%
! GATGGTGTTAATGGAGCAAA+TGG - Chr8:89913641-89913660 MsG0880047714.01.T01:intron 40.0%
! GGAAGTCTTGGATCTTTTTC+TGG - Chr8:89912498-89912517 MsG0880047714.01.T01:intron 40.0%
! TCGGTTTTCCCCGTTAAATT+CGG + Chr8:89910191-89910210 None:intergenic 40.0%
! TGGTATTATTGGTGCTTTGG+GGG - Chr8:89913544-89913563 MsG0880047714.01.T01:intron 40.0%
! TTTTTACCCCCGATATGGTT+GGG - Chr8:89910583-89910602 MsG0880047714.01.T01:intron 40.0%
!! AACAAATAGGTGGGTTGCTT+GGG - Chr8:89912160-89912179 MsG0880047714.01.T01:intron 40.0%
!! AATTTTAAAAAGCGGGTGCG+GGG + Chr8:89910293-89910312 None:intergenic 40.0%
!! AGCATTGGGAGATTTTGTAG+GGG - Chr8:89913490-89913509 MsG0880047714.01.T01:intron 40.0%
!! TGTAAGTACCAAGTTGGTGT+TGG + Chr8:89912981-89913000 None:intergenic 40.0%
!! TTTGGTACTGGTCTCAAACT+CGG - Chr8:89913266-89913285 MsG0880047714.01.T01:intron 40.0%
!!! GAAGCATTGGGAGATTTTGT+AGG - Chr8:89913488-89913507 MsG0880047714.01.T01:intron 40.0%
!!! GGATTATCTGGTTTTGGTAC+TGG - Chr8:89913254-89913273 MsG0880047714.01.T01:intron 40.0%
!!! GTTTTTTATTTCCCCGTGCT+TGG - Chr8:89911049-89911068 MsG0880047714.01.T01:CDS 40.0%
AAGCAGTGCCACGTACATTT+GGG - Chr8:89911404-89911423 MsG0880047714.01.T01:intron 45.0%
AATATGAGAGGGACAGAGGA+GGG + Chr8:89911769-89911788 None:intergenic 45.0%
ACATGATTGGGTTTGAGCTG+AGG + Chr8:89912004-89912023 None:intergenic 45.0%
ACATTCCCGAGAAAAACCTC+GGG + Chr8:89911305-89911324 None:intergenic 45.0%
AGATGCATCCCAAATGTACG+TGG + Chr8:89911415-89911434 None:intergenic 45.0%
CAAACTCGGTAGTGATTCAG+AGG - Chr8:89913280-89913299 MsG0880047714.01.T01:intron 45.0%
CAACAGGAGCAGTAATAGCA+AGG - Chr8:89913153-89913172 MsG0880047714.01.T01:intron 45.0%
CAACGTAAGCCTCAACATGA+TGG + Chr8:89911947-89911966 None:intergenic 45.0%
CAAGTCTCTGCCTACATAGT+TGG - Chr8:89913233-89913252 MsG0880047714.01.T01:intron 45.0%
CAGGACTACCCTTCAAATTC+AGG - Chr8:89909645-89909664 MsG0880047714.01.T01:three_prime_UTR 45.0%
CATCATGTTGAGGCTTACGT+TGG - Chr8:89911945-89911964 MsG0880047714.01.T01:intron 45.0%
CTGAATTTGAAGGGTAGTCC+TGG + Chr8:89909647-89909666 None:intergenic 45.0%
GCAGAGAACAAGACTTCAGA+TGG - Chr8:89913623-89913642 MsG0880047714.01.T01:intron 45.0%
GGTTCATGTATGGCAAGATG+GGG - Chr8:89912414-89912433 MsG0880047714.01.T01:intron 45.0%
GTGTCGCATAGATACCAAAC+AGG + Chr8:89912903-89912922 None:intergenic 45.0%
TAACATACCCTACAACGTGG+TGG + Chr8:89913430-89913449 None:intergenic 45.0%
TAACCGCCTGAATGGTAAGT+GGG + Chr8:89911375-89911394 None:intergenic 45.0%
TAAGCAGTGCCACGTACATT+TGG - Chr8:89911403-89911422 MsG0880047714.01.T01:intron 45.0%
TAGGGGATCGTTACAAGAAC+TGG - Chr8:89913507-89913526 MsG0880047714.01.T01:intron 45.0%
TCCACGTGTAAGCTTCCAAA+AGG + Chr8:89913580-89913599 None:intergenic 45.0%
TGGTAACATACCCTACAACG+TGG + Chr8:89913433-89913452 None:intergenic 45.0%
TGTCTGCGCCTGAATTTGAA+GGG + Chr8:89909656-89909675 None:intergenic 45.0%
TTGTCTGCGCCTGAATTTGA+AGG + Chr8:89909657-89909676 None:intergenic 45.0%
TTGTTGATGTGGAATGAGGG+CGG + Chr8:89911706-89911725 None:intergenic 45.0%
TTTCATCGTATGACCAGTGG+AGG + Chr8:89912094-89912113 None:intergenic 45.0%
TTTGGAAGCTTACACGTGGA+TGG - Chr8:89913580-89913599 MsG0880047714.01.T01:intron 45.0%
! AAAACCGATTTAACCGGGTG+CGG - Chr8:89910203-89910222 MsG0880047714.01.T01:CDS 45.0%
! ACGGGGAAAACCGATTTAAC+CGG - Chr8:89910197-89910216 MsG0880047714.01.T01:CDS 45.0%
! AGGTTTGAAGCTGCTCATCT+TGG - Chr8:89909814-89909833 MsG0880047714.01.T01:three_prime_UTR 45.0%
! ATATGCTTTTGGGCTTCCAC+TGG + Chr8:89912255-89912274 None:intergenic 45.0%
! CGGTTTTCCCCGTTAAATTC+GGG + Chr8:89910190-89910209 None:intergenic 45.0%
! CGTACATTTGGGATGCATCT+CGG - Chr8:89911415-89911434 MsG0880047714.01.T01:intron 45.0%
! GCTACTTTGACCCTTCCAAA+TGG - Chr8:89912379-89912398 MsG0880047714.01.T01:intron 45.0%
! GGTATTATTGGTGCTTTGGG+GGG - Chr8:89913545-89913564 MsG0880047714.01.T01:intron 45.0%
! GGTTTTCCCCGTTAAATTCG+GGG + Chr8:89910189-89910208 None:intergenic 45.0%
! GTACATTTGGGATGCATCTC+GGG - Chr8:89911416-89911435 MsG0880047714.01.T01:intron 45.0%
! TAAGGCGTACTGGTCATTAC+AGG - Chr8:89909994-89910013 MsG0880047714.01.T01:CDS 45.0%
! TACATCCCGAGGTTTTTCTC+GGG - Chr8:89911297-89911316 MsG0880047714.01.T01:intron 45.0%
! TTGTTTGCTAACCGCCTGAA+TGG + Chr8:89911383-89911402 None:intergenic 45.0%
! TTTTACCCCCGATATGGTTG+GGG - Chr8:89910584-89910603 MsG0880047714.01.T01:intron 45.0%
!! AGTACCAAGTTGGTGTTGGT+CGG + Chr8:89912977-89912996 None:intergenic 45.0%
!! ATATGAAGAGTTGGTGGGGT+TGG + Chr8:89911729-89911748 None:intergenic 45.0%
!! CAACAAATAGGTGGGTTGCT+TGG - Chr8:89912159-89912178 MsG0880047714.01.T01:intron 45.0%
!! CTTGCTATTACTGCTCCTGT+TGG + Chr8:89913155-89913174 None:intergenic 45.0%
!! TAACGGGTTCATTCACAGAC+TGG - Chr8:89910688-89910707 MsG0880047714.01.T01:intron 45.0%
!! TCCTTTTGGAAGCTTACACG+TGG - Chr8:89913576-89913595 MsG0880047714.01.T01:intron 45.0%
AACCAATCCCACTTGCAGCT+TGG + Chr8:89912530-89912549 None:intergenic 50.0%
AACCGCCTGAATGGTAAGTG+GGG + Chr8:89911374-89911393 None:intergenic 50.0%
AACTGCCCCACTTACCATTC+AGG - Chr8:89911366-89911385 MsG0880047714.01.T01:intron 50.0%
ACAAGCACACGGTTGCAAGA+AGG - Chr8:89912292-89912311 MsG0880047714.01.T01:intron 50.0%
ACCAATCCCACTTGCAGCTT+GGG + Chr8:89912529-89912548 None:intergenic 50.0%
AGAGTTGTCCATCCGTGAAC+AGG + Chr8:89909763-89909782 None:intergenic 50.0%
AGTTAACCTCGTACCTCCAC+TGG - Chr8:89912078-89912097 MsG0880047714.01.T01:intron 50.0%
ATAGAACCAAGCAGGGTCTG+CGG + Chr8:89913198-89913217 None:intergenic 50.0%
CAAAGCTTGTGCTCCGATCA+TGG + Chr8:89912216-89912235 None:intergenic 50.0%
CAATATGAGAGGGACAGAGG+AGG + Chr8:89911770-89911789 None:intergenic 50.0%
CATGATCGGAGCACAAGCTT+TGG - Chr8:89912214-89912233 MsG0880047714.01.T01:intron 50.0%
CGGACTACACTAACACGTGT+TGG + Chr8:89912957-89912976 None:intergenic 50.0%
CTAACCGCCTGAATGGTAAG+TGG + Chr8:89911376-89911395 None:intergenic 50.0%
GAGTTGTCCATCCGTGAACA+GGG + Chr8:89909762-89909781 None:intergenic 50.0%
GTGGCAGACAAACCAGAAAC+AGG + Chr8:89912331-89912350 None:intergenic 50.0%
TAGTCCGACCAACACCAACT+TGG - Chr8:89912970-89912989 MsG0880047714.01.T01:intron 50.0%
TATTAGACATCGCAACGGGG+CGG + Chr8:89910655-89910674 None:intergenic 50.0%
TGGGGAATCTTGATGCCAAC+AGG - Chr8:89913137-89913156 MsG0880047714.01.T01:intron 50.0%
TTATTTCCCCGTGCTTGGCA+CGG - Chr8:89911054-89911073 MsG0880047714.01.T01:CDS 50.0%
TTCCTAACCCTGTTCACGGA+TGG - Chr8:89909752-89909771 MsG0880047714.01.T01:three_prime_UTR 50.0%
! AAACCGATTTAACCGGGTGC+GGG - Chr8:89910204-89910223 MsG0880047714.01.T01:CDS 50.0%
! CGGGGAAAACCGATTTAACC+GGG - Chr8:89910198-89910217 MsG0880047714.01.T01:CDS 50.0%
! TGGAGGTACGAGGTTAACTG+TGG + Chr8:89912077-89912096 None:intergenic 50.0%
!! AAGGGTGCTGCTTGGATTGA+TGG + Chr8:89912186-89912205 None:intergenic 50.0%
!! TTGGAGTTTTAGTACGGGGG+CGG - Chr8:89910239-89910258 MsG0880047714.01.T01:CDS 50.0%
AATCCCACTTGCAGCTTGGG+AGG + Chr8:89912526-89912545 None:intergenic 55.0%
ACACCCGCACCCGGTTAAAT+CGG + Chr8:89910210-89910229 None:intergenic 55.0%
ACCCTTGACCCAGCCATGAT+CGG - Chr8:89912200-89912219 MsG0880047714.01.T01:intron 55.0%
ATAGTGACCCGTGCCAAGCA+CGG + Chr8:89911065-89911084 None:intergenic 55.0%
ATTTAACCGGGTGCGGGTGT+GGG - Chr8:89910210-89910229 MsG0880047714.01.T01:CDS 55.0%
CAGCAGTGCTATACATCCCG+AGG - Chr8:89911286-89911305 MsG0880047714.01.T01:intron 55.0%
CTTGTGCTCCGATCATGGCT+GGG + Chr8:89912211-89912230 None:intergenic 55.0%
GTACCTCCCAAGCTGCAAGT+GGG - Chr8:89912520-89912539 MsG0880047714.01.T01:intron 55.0%
GTCCATCCGTGAACAGGGTT+AGG + Chr8:89909757-89909776 None:intergenic 55.0%
GTGCGGGTGTGGGGAAAATT+TGG - Chr8:89910220-89910239 MsG0880047714.01.T01:CDS 55.0%
GTGGCTATTCCACAAGCCAG+TGG - Chr8:89912236-89912255 MsG0880047714.01.T01:intron 55.0%
TATTTCCCCGTGCTTGGCAC+GGG - Chr8:89911055-89911074 MsG0880047714.01.T01:CDS 55.0%
TCAAATCCGCAGACCCTGCT+TGG - Chr8:89913189-89913208 MsG0880047714.01.T01:intron 55.0%
TCCCAAGCTGCAAGTGGGAT+TGG - Chr8:89912525-89912544 MsG0880047714.01.T01:intron 55.0%
TCCCCGTTAAATTCGGGGCA+GGG + Chr8:89910184-89910203 None:intergenic 55.0%
TCCGATCATGGCTGGGTCAA+GGG + Chr8:89912204-89912223 None:intergenic 55.0%
TGAGGGCGGAAGAGAAGAAG+AGG + Chr8:89911692-89911711 None:intergenic 55.0%
TGCCCCACTTACCATTCAGG+CGG - Chr8:89911369-89911388 MsG0880047714.01.T01:intron 55.0%
TTCCCCGTTAAATTCGGGGC+AGG + Chr8:89910185-89910204 None:intergenic 55.0%
TTTAAAAAGCGGGTGCGGGG+CGG + Chr8:89910290-89910309 None:intergenic 55.0%
! AAGTTTTCGCGGGTGGGGTT+TGG - Chr8:89910512-89910531 MsG0880047714.01.T01:intron 55.0%
! AGTTTTCGCGGGTGGGGTTT+GGG - Chr8:89910513-89910532 MsG0880047714.01.T01:intron 55.0%
! GATCGGAGCACAAGCTTTGG+TGG - Chr8:89912217-89912236 MsG0880047714.01.T01:intron 55.0%
! GTATGACCAGTGGAGGTACG+AGG + Chr8:89912087-89912106 None:intergenic 55.0%
!! GGTGGGGTTGGTTGTTGATG+TGG + Chr8:89911717-89911736 None:intergenic 55.0%
!! TGGAGTTTTAGTACGGGGGC+GGG - Chr8:89910240-89910259 MsG0880047714.01.T01:CDS 55.0%
!! TTTGGGCTTCCACTGGCTTG+TGG + Chr8:89912248-89912267 None:intergenic 55.0%
ACCCCCGATATGGTTGGGGA+CGG - Chr8:89910588-89910607 MsG0880047714.01.T01:intron 60.0%
CCCCGTTAAATTCGGGGCAG+GGG + Chr8:89910183-89910202 None:intergenic 60.0%
CCCCTGCCCCGAATTTAACG+GGG - Chr8:89910180-89910199 MsG0880047714.01.T01:CDS 60.0%
CGCCCCTGCCCCGAATTTAA+CGG - Chr8:89910178-89910197 MsG0880047714.01.T01:CDS 60.0%
CGTTAAATTCGGGGCAGGGG+CGG + Chr8:89910180-89910199 None:intergenic 60.0%
CTCCGATCATGGCTGGGTCA+AGG + Chr8:89912205-89912224 None:intergenic 60.0%
GATTTAACCGGGTGCGGGTG+TGG - Chr8:89910209-89910228 MsG0880047714.01.T01:CDS 60.0%
GCCCCTGCCCCGAATTTAAC+GGG - Chr8:89910179-89910198 MsG0880047714.01.T01:CDS 60.0%
GCTTGTGCTCCGATCATGGC+TGG + Chr8:89912212-89912231 None:intergenic 60.0%
GGTACCTCCCAAGCTGCAAG+TGG - Chr8:89912519-89912538 MsG0880047714.01.T01:intron 60.0%
TAGTGACCCGTGCCAAGCAC+GGG + Chr8:89911064-89911083 None:intergenic 60.0%
TTAAAAAGCGGGTGCGGGGC+GGG + Chr8:89910289-89910308 None:intergenic 60.0%
TTTAACCGGGTGCGGGTGTG+GGG - Chr8:89910211-89910230 MsG0880047714.01.T01:CDS 60.0%
! ATTTTCCCCACACCCGCACC+CGG + Chr8:89910219-89910238 None:intergenic 60.0%
! GTTTTCGCGGGTGGGGTTTG+GGG - Chr8:89910514-89910533 MsG0880047714.01.T01:intron 60.0%
!!! GGGGGGCATTGCTGTCCTTT+TGG - Chr8:89913562-89913581 MsG0880047714.01.T01:intron 60.0%
AACACCAACCCCGCCCCCAA+TGG + Chr8:89910560-89910579 None:intergenic 65.0%
ACACCAACCCCGCCCCCAAT+GGG + Chr8:89910559-89910578 None:intergenic 65.0%
AGTGACCCGTGCCAAGCACG+GGG + Chr8:89911063-89911082 None:intergenic 65.0%
ATATGGTTGGGGACGGGGGC+GGG - Chr8:89910595-89910614 MsG0880047714.01.T01:intron 65.0%
CCCCCGATATGGTTGGGGAC+GGG - Chr8:89910589-89910608 MsG0880047714.01.T01:intron 65.0%
CCCCCGTCCCCAACCATATC+GGG + Chr8:89910594-89910613 None:intergenic 65.0%
CCCCGATATGGTTGGGGACG+GGG - Chr8:89910590-89910609 MsG0880047714.01.T01:intron 65.0%
CCCCGTCCCCAACCATATCG+GGG + Chr8:89910593-89910612 None:intergenic 65.0%
CCCGATATGGTTGGGGACGG+GGG - Chr8:89910591-89910610 MsG0880047714.01.T01:intron 65.0%
CCCGTCCCCAACCATATCGG+GGG + Chr8:89910592-89910611 None:intergenic 65.0%
GACATCGCAACGGGGCGGAT+CGG + Chr8:89910650-89910669 None:intergenic 65.0%
GATATGGTTGGGGACGGGGG+CGG - Chr8:89910594-89910613 MsG0880047714.01.T01:intron 65.0%
GCCCCCGTCCCCAACCATAT+CGG + Chr8:89910595-89910614 None:intergenic 65.0%
GGTGTAAGCATCCCCCGCAC+CGG + Chr8:89910267-89910286 None:intergenic 65.0%
GTGTAAGCATCCCCCGCACC+GGG + Chr8:89910266-89910285 None:intergenic 65.0%
TAAAAAGCGGGTGCGGGGCG+GGG + Chr8:89910288-89910307 None:intergenic 65.0%
! TTTTAGTACGGGGGCGGGCC+CGG - Chr8:89910245-89910264 MsG0880047714.01.T01:CDS 65.0%
!! GCTGGGTCAAGGGTGCTGCT+TGG + Chr8:89912194-89912213 None:intergenic 65.0%
AAATTCGGGGCAGGGGCGGC+TGG + Chr8:89910176-89910195 None:intergenic 70.0%
AACCCCGCCCCCAATGGGGA+CGG + Chr8:89910554-89910573 None:intergenic 70.0%
AATTCGGGGCAGGGGCGGCT+GGG + Chr8:89910175-89910194 None:intergenic 70.0%
AGACCCGTCCCCATTGGGGG+CGG - Chr8:89910547-89910566 MsG0880047714.01.T01:intron 70.0%
ATCGCAACGGGGCGGATCGG+AGG + Chr8:89910647-89910666 None:intergenic 70.0%
CACCAACCCCGCCCCCAATG+GGG + Chr8:89910558-89910577 None:intergenic 70.0%
CCCAATGGGGACGGGTCTCC+CGG + Chr8:89910545-89910564 None:intergenic 70.0%
CCGGGAGACCCGTCCCCATT+GGG - Chr8:89910542-89910561 MsG0880047714.01.T01:intron 70.0%
CGGGAGACCCGTCCCCATTG+GGG - Chr8:89910543-89910562 MsG0880047714.01.T01:intron 70.0%
GGGAGACCCGTCCCCATTGG+GGG - Chr8:89910544-89910563 MsG0880047714.01.T01:intron 70.0%
TATGGTTGGGGACGGGGGCG+GGG - Chr8:89910596-89910615 MsG0880047714.01.T01:intron 70.0%
TTCGCGGGTGGGGTTTGGGG+CGG - Chr8:89910517-89910536 MsG0880047714.01.T01:intron 70.0%
ACCCCGCCCCCAATGGGGAC+GGG + Chr8:89910553-89910572 None:intergenic 75.0%
ACCCGTCCCCATTGGGGGCG+GGG - Chr8:89910549-89910568 MsG0880047714.01.T01:intron 75.0%
ATGGTTGGGGACGGGGGCGG+GGG - Chr8:89910597-89910616 MsG0880047714.01.T01:intron 75.0%
CAACGGGGCGGATCGGAGGC+GGG + Chr8:89910643-89910662 None:intergenic 75.0%
GACCCGTCCCCATTGGGGGC+GGG - Chr8:89910548-89910567 MsG0880047714.01.T01:intron 75.0%
GCAACGGGGCGGATCGGAGG+CGG + Chr8:89910644-89910663 None:intergenic 75.0%
GCCGGGAGACCCGTCCCCAT+TGG - Chr8:89910541-89910560 MsG0880047714.01.T01:intron 75.0%
GTCCCCATTGGGGGCGGGGT+TGG - Chr8:89910553-89910572 MsG0880047714.01.T01:intron 75.0%
! TCGCGGGTGGGGTTTGGGGC+GGG - Chr8:89910518-89910537 MsG0880047714.01.T01:intron 75.0%
! AGGGGCGGCTGGGTCTGGCG+GGG + Chr8:89910165-89910184 None:intergenic 80.0%
! CAGGGGCGGCTGGGTCTGGC+GGG + Chr8:89910166-89910185 None:intergenic 80.0%
! GCAGGGGCGGCTGGGTCTGG+CGG + Chr8:89910167-89910186 None:intergenic 80.0%
! GGCTGGGTCTGGCGGGGGCT+GGG + Chr8:89910159-89910178 None:intergenic 80.0%
!! CGCGGGTGGGGTTTGGGGCG+GGG - Chr8:89910519-89910538 MsG0880047714.01.T01:intron 80.0%
!! GGTGGGGTTTGGGGCGGGGC+CGG - Chr8:89910523-89910542 MsG0880047714.01.T01:intron 80.0%
!! GTGGGGTTTGGGGCGGGGCC+GGG - Chr8:89910524-89910543 MsG0880047714.01.T01:intron 80.0%
! ACGGGGGCGGGGGCAGGGAC+GGG - Chr8:89910607-89910626 MsG0880047714.01.T01:intron 85.0%
! CGGCTGGGTCTGGCGGGGGC+TGG + Chr8:89910160-89910179 None:intergenic 85.0%
! GACGGGGGCGGGGGCAGGGA+CGG - Chr8:89910606-89910625 MsG0880047714.01.T01:intron 85.0%
! GGGGCAGGGGCGGCTGGGTC+TGG + Chr8:89910170-89910189 None:intergenic 85.0%
! GGGGCGGCTGGGTCTGGCGG+GGG + Chr8:89910164-89910183 None:intergenic 85.0%
! GTACGGGGGCGGGCCCGGTG+CGG - Chr8:89910250-89910269 MsG0880047714.01.T01:CDS 85.0%
! TACGGGGGCGGGCCCGGTGC+GGG - Chr8:89910251-89910270 MsG0880047714.01.T01:CDS 85.0%
! TGGGGACGGGGGCGGGGGCA+GGG - Chr8:89910602-89910621 MsG0880047714.01.T01:intron 85.0%
! TTGGGGACGGGGGCGGGGGC+AGG - Chr8:89910601-89910620 MsG0880047714.01.T01:intron 85.0%
! ACGGGGGCGGGCCCGGTGCG+GGG - Chr8:89910252-89910271 MsG0880047714.01.T01:CDS 90.0%
! CGGGGGCGGGGGCAGGGACG+GGG - Chr8:89910608-89910627 MsG0880047714.01.T01:intron 90.0%
! CGGGGGCGGGCCCGGTGCGG+GGG - Chr8:89910253-89910272 MsG0880047714.01.T01:CDS 95.0%
Chromosome Type Strat End Strand Name
Chr8 gene 89909623 89913949 89909623 ID=MsG0880047714.01;Name=MsG0880047714.01
Chr8 mRNA 89909623 89913949 89909623 ID=MsG0880047714.01.T01;Parent=MsG0880047714.01;Name=MsG0880047714.01.T01;_AED=0.47;_eAED=0.48;_QI=0|0|0.33|1|1|1|3|264|342
Chr8 exon 89909623 89910462 89909623 ID=MsG0880047714.01.T01:exon:16109;Parent=MsG0880047714.01.T01
Chr8 exon 89911026 89911214 89911026 ID=MsG0880047714.01.T01:exon:16108;Parent=MsG0880047714.01.T01
Chr8 exon 89913686 89913949 89913686 ID=MsG0880047714.01.T01:exon:16107;Parent=MsG0880047714.01.T01
Chr8 CDS 89913686 89913949 89913686 ID=MsG0880047714.01.T01:cds;Parent=MsG0880047714.01.T01
Chr8 CDS 89911026 89911214 89911026 ID=MsG0880047714.01.T01:cds;Parent=MsG0880047714.01.T01
Chr8 CDS 89909887 89910462 89909887 ID=MsG0880047714.01.T01:cds;Parent=MsG0880047714.01.T01
Chr8 three_prime_UTR 89909623 89909886 89909623 ID=MsG0880047714.01.T01:three_prime_utr;Parent=MsG0880047714.01.T01
Gene Sequence

>MsG0880047714.01.T01

ATGAATCTTATTCTGAGTGATCCAGGACTACCCTTCAAATTCAGGCGCAGACAATTTCCATTGACACTTTGTTTTGCAATGACAATAAATAAAGTCATGGTCAATCTTTATCTCGAGTGGGAGTTTATCTTCCTAACCCTGTTCACGGATGGACAACTCTATGTCGCTGTCTCTCGAGTTAATTCTAGAAAAGGTTTGAAGCTGCTCATCTTGGATGAAGATAATAATGTTTGCAAGGAGACCACAAATGTTGTGTATCGTGAAAATAATGAGGTTACTATTTTTGCTACTTTGACCCTTCCAAATGGAACAACCTCTTTGGTTCATGTATGGCAAGATGGGGTTCTCTCTTCTGATACTACTCCTCAAGAACATAGCCATGAATCTTCTCACCAAAACTCTAAGGAAGTCTTGGATCTTTTTCTGGTACCTCCCAAGCTGCAAGTGGGATTGACACATGGAGTTCTAAATGCAATAAGTTGGGGAATCTTGATGCCAACAGGAGCAGTAATAGCAAGGTATTTGAAGGTGTTCAAATCCGCAGACCCTGCTTGGTTCTATCTTCACATAACTTGTCAAGTCTCTGCCTACATAGTTGGATTATCTGGTTTTGGTACTGGTCTCAAACTCGGTAGTGATTCAGAGGGTATTACATACGACACCCATAGAGCACTTGCTATTGTTCTTGTAACCTTGGCAACTCTTCAAGTGTTTGCTCTATTTTTGAGGCCAAACAAAGACCATAAGTTGAGATTTTACTGGAATATCTACCACCACGTTGTAGGGTATGTTACCATAAGCATTAGCATTACAAACGTTTTCAAAGGGTTTGAAGCATTGGGAGATTTTGTAGGGGATCGTTACAAGAACTGGAAGCATGCTTACATTGGTATTATTGGTGCTTTGGGGGGCATTGCTGTCCTTTTGGAAGCTTACACGTGGATGGTGTGCATGAAGAGAAAGAAAGCAGAGAACAAGACTTCAGATGGTGTTAATGGAGCAAATGGCTATGGTTCTTCTACCCTTTAA

Protein sequence

>MsG0880047714.01.T01

MNLILSDPGLPFKFRRRQFPLTLCFAMTINKVMVNLYLEWEFIFLTLFTDGQLYVAVSRVNSRKGLKLLILDEDNNVCKETTNVVYRENNEVTIFATLTLPNGTTSLVHVWQDGVLSSDTTPQEHSHESSHQNSKEVLDLFLVPPKLQVGLTHGVLNAISWGILMPTGAVIARYLKVFKSADPAWFYLHITCQVSAYIVGLSGFGTGLKLGSDSEGITYDTHRALAIVLVTLATLQVFALFLRPNKDHKLRFYWNIYHHVVGYVTISISITNVFKGFEALGDFVGDRYKNWKHAYIGIIGALGGIAVLLEAYTWMVCMKRKKAENKTSDGVNGANGYGSSTL*