AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880042122.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880042122.01.T01 MTR_8g012290 91.977 511 22 4 3 508 1 497 0.0 923
MsG0880042122.01.T01 MTR_8g012290 91.797 512 22 5 3 508 1 498 0.0 918
MsG0880042122.01.T01 MTR_7g053410 60.000 545 140 19 3 500 1 514 0.0 548
MsG0880042122.01.T01 MTR_7g053410 59.963 542 139 19 3 497 1 511 0.0 545
MsG0880042122.01.T01 MTR_5g048860 33.913 460 204 13 108 508 140 558 2.62e-58 202
MsG0880042122.01.T01 MTR_3g116770 42.384 302 145 10 221 508 112 398 2.85e-50 177
MsG0880042122.01.T01 MTR_3g116770 43.046 302 142 11 221 508 112 397 3.72e-50 177
MsG0880042122.01.T01 MTR_8g065740 41.581 291 141 9 107 390 125 393 1.49e-49 177
MsG0880042122.01.T01 MTR_1g017350 47.368 228 99 7 213 437 181 390 5.30e-47 169
MsG0880042122.01.T01 MTR_1g017350 47.368 228 99 7 213 437 181 390 7.46e-47 169
MsG0880042122.01.T01 MTR_4g070320 50.000 206 81 6 195 398 54 239 2.59e-46 165
MsG0880042122.01.T01 MTR_8g062240 64.394 132 45 2 252 382 102 232 5.70e-46 162
MsG0880042122.01.T01 MTR_5g037250 65.289 121 40 1 254 374 67 185 1.51e-45 160
MsG0880042122.01.T01 MTR_1g017350 53.933 178 66 6 213 387 181 345 4.38e-44 161
MsG0880042122.01.T01 MTR_1g017350 53.933 178 66 6 213 387 181 345 5.10e-44 160
MsG0880042122.01.T01 MTR_3g498825 62.595 131 43 2 260 387 109 236 1.25e-41 152
MsG0880042122.01.T01 MTR_8g099880 76.344 93 19 1 298 387 142 234 4.21e-40 147
MsG0880042122.01.T01 MTR_7g092510 69.318 88 27 0 298 385 170 257 3.56e-37 140
MsG0880042122.01.T01 MTR_1g059270 67.416 89 29 0 298 386 157 245 6.51e-37 137
MsG0880042122.01.T01 MTR_1g059270 55.932 118 46 2 298 415 157 268 1.10e-36 138
MsG0880042122.01.T01 MTR_6g084120 54.902 102 37 1 280 381 134 226 2.00e-27 111
MsG0880042122.01.T01 MTR_4g131160 61.446 83 28 2 284 366 182 260 2.48e-22 99.4
MsG0880042122.01.T01 MTR_4g131160 61.446 83 28 2 284 366 185 263 2.86e-22 99.4
MsG0880042122.01.T01 MTR_1g080890 64.000 75 26 1 292 366 184 257 1.38e-21 96.7
MsG0880042122.01.T01 MTR_2g098310 48.235 85 37 1 287 371 325 402 1.05e-15 79.3
MsG0880042122.01.T01 MTR_1g069155 39.655 116 56 3 256 371 285 386 2.70e-15 79.0
MsG0880042122.01.T01 MTR_4g065870 58.462 65 27 0 301 365 355 419 3.19e-15 78.2
MsG0880042122.01.T01 MTR_2g098310 51.282 78 31 1 287 364 325 395 5.14e-15 77.4
MsG0880042122.01.T01 MTR_1g070870 60.000 75 29 1 292 366 111 184 5.33e-15 75.9
MsG0880042122.01.T01 MTR_1g070870 60.000 75 29 1 292 366 114 187 5.81e-15 75.9
MsG0880042122.01.T01 MTR_4g033295 55.385 65 29 0 301 365 118 182 6.65e-15 73.6
MsG0880042122.01.T01 MTR_4g033295 53.731 67 30 1 301 366 118 184 1.15e-14 72.8
MsG0880042122.01.T01 MTR_7g099540 39.823 113 62 2 259 371 215 321 1.23e-14 76.6
MsG0880042122.01.T01 MTR_4g065870 58.065 62 26 0 301 362 355 416 1.57e-14 75.9
MsG0880042122.01.T01 MTR_7g092540 45.946 74 40 0 301 374 243 316 5.32e-14 73.6
MsG0880042122.01.T01 MTR_1g084980 32.778 180 97 6 195 366 363 526 5.70e-14 75.1
MsG0880042122.01.T01 MTR_1g052470 52.239 67 32 0 301 367 298 364 5.90e-14 73.9
MsG0880042122.01.T01 MTR_7g092540 51.562 64 31 0 301 364 243 306 1.21e-13 72.0
MsG0880042122.01.T01 MTR_7g099540 38.136 118 66 3 259 375 215 326 3.18e-13 72.0
MsG0880042122.01.T01 MTR_4g107320 73.333 45 11 1 319 362 60 104 3.85e-13 67.0
MsG0880042122.01.T01 MTR_3g028520 50.769 65 32 0 301 365 322 386 6.98e-13 70.9
MsG0880042122.01.T01 MTR_3g027650 50.769 65 32 0 301 365 322 386 6.98e-13 70.9
MsG0880042122.01.T01 MTR_5g005110 40.625 96 47 2 302 388 225 319 1.76e-12 68.9
MsG0880042122.01.T01 MTR_1g018090 52.308 65 30 1 301 365 274 337 2.68e-12 68.6
MsG0880042122.01.T01 MTR_3g027650 51.613 62 30 0 301 362 322 383 3.18e-12 68.6
MsG0880042122.01.T01 MTR_8g036235 47.692 65 34 0 301 365 316 380 3.23e-12 68.6
MsG0880042122.01.T01 MTR_1g019240 40.449 89 45 2 279 367 70 150 4.09e-12 67.0
MsG0880042122.01.T01 MTR_3g449770 38.144 97 56 2 270 366 281 373 1.46e-11 67.0
MsG0880042122.01.T01 MTR_3g103030 53.125 64 29 1 302 365 230 292 1.99e-11 65.5
MsG0880042122.01.T01 MTR_7g110810 32.895 152 88 5 218 366 126 266 6.79e-11 64.3
MsG0880042122.01.T01 MTR_2g098310 35.766 137 67 6 287 416 325 447 7.83e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880042122.01.T01 AT3G07340 42.773 512 183 18 3 482 1 434 7.50e-102 313
MsG0880042122.01.T01 AT3G07340 42.276 492 175 17 3 462 1 415 1.65e-92 289
MsG0880042122.01.T01 AT5G48560 42.166 517 196 19 27 508 50 498 1.19e-88 281
MsG0880042122.01.T01 AT5G48560 42.463 471 182 17 27 462 50 466 2.44e-80 258
MsG0880042122.01.T01 AT3G23690 45.522 268 103 10 223 481 113 346 4.88e-56 192
MsG0880042122.01.T01 AT1G68920 41.083 314 146 9 86 390 108 391 4.75e-53 187
MsG0880042122.01.T01 AT1G68920 41.083 314 146 9 86 390 108 391 4.75e-53 187
MsG0880042122.01.T01 AT1G68920 41.083 314 146 9 86 390 108 391 4.75e-53 187
MsG0880042122.01.T01 AT1G68920 40.625 320 138 11 86 390 108 390 9.98e-53 186
MsG0880042122.01.T01 AT1G26260 43.706 286 114 12 107 391 73 312 1.97e-48 172
MsG0880042122.01.T01 AT1G26260 43.706 286 114 12 107 391 73 312 1.97e-48 172
MsG0880042122.01.T01 AT1G26260 43.706 286 114 12 107 391 73 312 1.97e-48 172
MsG0880042122.01.T01 AT1G26260 43.706 286 114 12 107 391 73 312 1.97e-48 172
MsG0880042122.01.T01 AT1G59640 67.200 125 39 1 258 380 91 215 4.52e-48 167
MsG0880042122.01.T01 AT1G59640 67.200 125 39 1 258 380 91 215 2.23e-47 168
MsG0880042122.01.T01 AT1G26260 42.173 313 128 15 86 392 26 291 3.95e-46 165
MsG0880042122.01.T01 AT1G10120 52.258 155 59 3 253 393 144 297 6.57e-45 162
MsG0880042122.01.T01 AT1G10120 52.258 155 59 3 253 393 144 297 6.57e-45 162
MsG0880042122.01.T01 AT1G26260 63.768 138 40 4 264 392 126 262 6.87e-45 161
MsG0880042122.01.T01 AT5G50915 56.463 147 59 2 226 372 66 207 2.51e-43 155
MsG0880042122.01.T01 AT5G50915 56.463 147 59 2 226 372 66 207 2.51e-43 155
MsG0880042122.01.T01 AT5G50915 56.849 146 58 2 226 371 66 206 7.21e-43 154
MsG0880042122.01.T01 AT5G50915 56.849 146 58 2 226 371 66 206 7.21e-43 154
MsG0880042122.01.T01 AT2G18300 58.519 135 55 1 256 389 139 273 2.69e-42 154
MsG0880042122.01.T01 AT4G36540 51.351 185 74 5 206 389 60 229 4.40e-42 152
MsG0880042122.01.T01 AT4G34530 78.409 88 19 0 295 382 166 253 9.47e-42 152
MsG0880042122.01.T01 AT4G36540 53.409 176 66 5 208 382 62 222 9.69e-42 151
MsG0880042122.01.T01 AT2G18300 58.394 137 54 2 256 391 139 273 1.38e-41 152
MsG0880042122.01.T01 AT5G62610 76.087 92 17 1 282 373 139 225 1.41e-41 150
MsG0880042122.01.T01 AT5G62610 76.087 92 17 1 282 373 139 225 1.41e-41 150
MsG0880042122.01.T01 AT2G18300 58.394 137 54 2 256 391 139 273 2.56e-41 152
MsG0880042122.01.T01 AT3G57800 64.078 103 32 1 298 400 201 298 4.35e-38 144
MsG0880042122.01.T01 AT2G42300 61.682 107 36 1 298 404 182 283 4.52e-38 142
MsG0880042122.01.T01 AT2G42300 68.539 89 28 0 298 386 182 270 5.77e-38 140
MsG0880042122.01.T01 AT1G25330 67.677 99 29 2 296 393 99 195 5.80e-36 133
MsG0880042122.01.T01 AT1G18400 65.000 100 33 2 299 396 143 242 5.82e-34 129
MsG0880042122.01.T01 AT1G73830 70.588 85 25 0 300 384 146 230 6.18e-34 129
MsG0880042122.01.T01 AT1G73830 70.588 85 25 0 300 384 146 230 6.40e-34 129
MsG0880042122.01.T01 AT1G18400 69.767 86 26 0 299 384 143 228 8.89e-34 129
MsG0880042122.01.T01 AT3G57800 44.000 150 32 2 298 400 201 345 1.54e-29 120
MsG0880042122.01.T01 AT2G24260 65.753 73 24 1 294 366 28 99 4.51e-23 98.6
MsG0880042122.01.T01 AT2G24260 65.753 73 24 1 294 366 131 202 3.79e-22 98.2
MsG0880042122.01.T01 AT4G30980 72.727 66 17 1 301 366 130 194 4.82e-22 97.1
MsG0880042122.01.T01 AT4G30980 72.727 66 17 1 301 366 178 242 7.68e-22 97.4
MsG0880042122.01.T01 AT5G58010 56.667 90 38 1 277 366 75 163 9.93e-22 95.9
MsG0880042122.01.T01 AT2G42300 83.721 43 7 0 298 340 182 224 1.95e-18 84.7
MsG0880042122.01.T01 AT2G42300 83.721 43 7 0 298 340 182 224 1.95e-18 84.7
MsG0880042122.01.T01 AT2G42300 83.721 43 7 0 298 340 182 224 2.19e-18 84.7
MsG0880042122.01.T01 AT4G02590 42.336 137 68 4 230 366 22 147 2.23e-15 76.3
MsG0880042122.01.T01 AT2G20180 34.483 145 76 4 229 366 210 342 2.47e-15 79.0
MsG0880042122.01.T01 AT2G20180 34.483 145 76 4 229 366 210 342 2.47e-15 79.0
MsG0880042122.01.T01 AT2G20180 34.483 145 76 4 229 366 210 342 2.47e-15 79.0
MsG0880042122.01.T01 AT2G20180 34.483 145 76 4 229 366 210 342 2.47e-15 79.0
MsG0880042122.01.T01 AT4G02590 42.336 137 68 4 230 366 85 210 3.13e-15 77.0
MsG0880042122.01.T01 AT4G02590 42.336 137 68 4 230 366 85 210 3.13e-15 77.0
MsG0880042122.01.T01 AT2G20180 36.232 138 83 3 229 366 139 271 3.43e-15 77.8
MsG0880042122.01.T01 AT2G20180 36.232 138 83 3 229 366 139 271 3.43e-15 77.8
MsG0880042122.01.T01 AT2G20180 36.232 138 83 3 229 366 139 271 3.43e-15 77.8
MsG0880042122.01.T01 AT4G09180 52.239 67 32 0 299 365 182 248 2.04e-14 73.9
MsG0880042122.01.T01 AT2G42280 53.125 64 30 0 301 364 279 342 3.51e-14 74.3
MsG0880042122.01.T01 AT1G51140 56.250 64 28 0 301 364 304 367 4.54e-14 74.3
MsG0880042122.01.T01 AT1G03040 50.476 105 41 4 284 378 124 227 4.59e-14 73.6
MsG0880042122.01.T01 AT1G09530 39.583 96 47 2 271 366 317 401 5.06e-14 75.1
MsG0880042122.01.T01 AT1G09530 39.583 96 47 2 271 366 317 401 5.06e-14 75.1
MsG0880042122.01.T01 AT1G09530 39.583 96 47 2 271 366 317 401 5.06e-14 75.1
MsG0880042122.01.T01 AT1G09530 39.583 96 47 2 271 366 317 401 5.06e-14 75.1
MsG0880042122.01.T01 AT1G09530 39.583 96 47 2 271 366 317 401 5.06e-14 75.1
MsG0880042122.01.T01 AT1G09530 39.583 96 47 2 271 366 317 401 5.06e-14 75.1
MsG0880042122.01.T01 AT1G03040 50.000 106 42 4 283 378 118 222 6.17e-14 72.8
MsG0880042122.01.T01 AT2G42280 54.545 66 28 1 301 364 279 344 6.81e-14 73.6
MsG0880042122.01.T01 AT2G20180 35.556 135 82 3 229 363 210 339 7.79e-14 73.2
MsG0880042122.01.T01 AT1G35460 50.746 67 33 0 299 365 179 245 9.44e-14 71.6
MsG0880042122.01.T01 AT1G03040 50.476 105 41 4 284 378 124 227 9.85e-14 72.8
MsG0880042122.01.T01 AT4G28815 56.897 58 24 1 304 361 71 127 2.27e-13 70.1
MsG0880042122.01.T01 AT4G28800 35.099 151 71 6 215 365 189 312 4.36e-13 71.6
MsG0880042122.01.T01 AT4G28815 56.897 58 24 1 304 361 147 203 8.64e-13 69.7
MsG0880042122.01.T01 AT2G46970 34.884 129 67 4 243 366 140 256 1.00e-12 70.1
MsG0880042122.01.T01 AT2G46970 34.884 129 67 4 243 366 171 287 1.01e-12 70.5
MsG0880042122.01.T01 AT4G28800 34.161 161 78 7 215 374 201 334 1.22e-12 70.5
MsG0880042122.01.T01 AT2G46970 34.884 129 67 4 243 366 149 265 1.32e-12 70.1
MsG0880042122.01.T01 AT4G28790 50.000 64 31 1 303 366 273 335 6.89e-12 67.8
MsG0880042122.01.T01 AT4G33880 33.333 180 99 6 206 365 151 329 8.47e-12 67.0
MsG0880042122.01.T01 AT1G27740 43.678 87 48 1 279 365 145 230 1.18e-11 65.5
MsG0880042122.01.T01 AT2G14760 50.769 65 31 1 301 365 237 300 3.58e-11 65.1
MsG0880042122.01.T01 AT4G00050 50.769 65 31 1 301 365 105 168 4.06e-11 64.3
MsG0880042122.01.T01 AT2G43140 48.485 66 34 0 299 364 132 197 5.30e-11 62.8
MsG0880042122.01.T01 AT4G00050 50.769 65 31 1 301 365 207 270 8.38e-11 64.3
MsG0880042122.01.T01 AT4G28790 45.455 66 35 1 303 368 273 337 9.83e-11 63.9

Find 94 sgRNAs with CRISPR-Local

Find 191 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCGTTGACTTGTCCCAATT+TGG 0.196239 8:-4038140 None:intergenic
GAGGGAATTGATAGGAAAAT+TGG 0.208603 8:+4038268 MsG0880042122.01.T01:CDS
CTTTAGTGCTTTACCTTTGT+TGG 0.234392 8:-4038791 None:intergenic
ATGCATTTACCTTTCCTAAA+TGG 0.234846 8:+4040562 MsG0880042122.01.T01:CDS
AATTATACCTTGTAGGTTAC+TGG 0.243510 8:+4040016 MsG0880042122.01.T01:intron
TCTCATACTTTAATGGAAAA+TGG 0.244355 8:+4038515 MsG0880042122.01.T01:CDS
AATACACCAAATGGAGAAAT+TGG 0.248984 8:+4038689 MsG0880042122.01.T01:CDS
CACCTTCATGAAATCCATTT+AGG 0.262102 8:-4040576 None:intergenic
TCCTCCTCAGAGAATGTTAA+TGG 0.266804 8:-4040977 None:intergenic
ATAGGAAAATTGGGAACTTT+TGG 0.267348 8:+4038278 MsG0880042122.01.T01:CDS
TCTTTGTGCCATAATAATAT+TGG 0.268551 8:+4040538 MsG0880042122.01.T01:CDS
CTGGGGTTGTTGCCCATAAA+AGG 0.272608 8:-4040443 None:intergenic
CAGTGGGTCCCATTTGTATT+AGG 0.280658 8:-4040493 None:intergenic
TCAAAGATCTCATACTTTAA+TGG 0.282745 8:+4038508 MsG0880042122.01.T01:CDS
TGAAAATGGTATCAAGAATA+TGG 0.300257 8:+4039160 MsG0880042122.01.T01:CDS
ACCGTTGTTCAGATGGGATT+TGG 0.307096 8:+4041007 MsG0880042122.01.T01:CDS
AATGCATGCCAATATTATTA+TGG 0.315999 8:-4040546 None:intergenic
TTGGACATGTTGTTGGGATT+TGG 0.322517 8:-4038230 None:intergenic
CTTAAATGCAAAGAAAATTA+AGG 0.345742 8:+4039118 MsG0880042122.01.T01:CDS
CTGAATCAAAGTTAAGGTTT+TGG 0.361916 8:-4038163 None:intergenic
CCGTTGACTTGTCCCAATTT+GGG 0.371481 8:-4038139 None:intergenic
TGCAGCCTGGTACAAGATCT+TGG 0.374431 8:-4039840 None:intergenic
TTGACACCAATTTCTCCATT+TGG 0.376211 8:-4038695 None:intergenic
ACAACATTCTTCTAACCCTT+TGG 0.378957 8:+4038310 MsG0880042122.01.T01:CDS
TTGATAAAATGGTTCATCAT+TGG 0.379781 8:-4038338 None:intergenic
AATAACATTCCTAATACAAA+TGG 0.381646 8:+4040484 MsG0880042122.01.T01:CDS
CAACATTGTTCATCACCATT+TGG 0.383931 8:-4038478 None:intergenic
GTGCTTTACCTTTGTTGGAT+TGG 0.388636 8:-4038786 None:intergenic
GTGTATTCCTGTTTGAAGTT+TGG 0.400671 8:-4041030 None:intergenic
TTTGTTGGATTGGAAGAGTT+TGG 0.402500 8:-4038776 None:intergenic
GAGGGTGAGAGAAATGAAAA+TGG 0.403613 8:+4039146 MsG0880042122.01.T01:CDS
AGTCCATCACTCAAAACATT+TGG 0.415104 8:+4038563 MsG0880042122.01.T01:CDS
TCTTGTACCAGGCTGCAATA+AGG 0.425820 8:+4039846 MsG0880042122.01.T01:CDS
ATGGTACTGAGGAATCTAAT+TGG 0.426318 8:-4040420 None:intergenic
AGGGAATTGATAGGAAAATT+GGG 0.442979 8:+4038269 MsG0880042122.01.T01:CDS
CTTCACATGATATGAATTCA+AGG 0.443498 8:+4038720 MsG0880042122.01.T01:CDS
ATGGAGAATTCTTGTTCTCA+TGG 0.459183 8:-4038601 None:intergenic
TCTGAGCAAAATACACCAAA+TGG 0.461659 8:+4038680 MsG0880042122.01.T01:CDS
GAATGTTATTATGAATAGCT+TGG 0.462285 8:-4040471 None:intergenic
ATTTCATGAAGGTGGTTCTC+AGG 0.463838 8:+4040585 MsG0880042122.01.T01:CDS
GACATGTTGTTGGGATTTGG+TGG 0.473535 8:-4038227 None:intergenic
TTCCTAAATGGATTTCATGA+AGG 0.474350 8:+4040574 MsG0880042122.01.T01:CDS
TTGATTGTAAATAGGTTAGG+AGG 0.479419 8:+4039788 MsG0880042122.01.T01:intron
CTTAAACACCGTTGTTCAGA+TGG 0.482331 8:+4041000 MsG0880042122.01.T01:CDS
GGTGGTGATGATGTAGCTGC+TGG 0.485718 8:-4038209 None:intergenic
CCACTGCTCAGTGGAGCCAT+TGG 0.490185 8:+4040510 MsG0880042122.01.T01:CDS
GATTTGGCCAAACTTCAAAC+AGG 0.499864 8:+4041023 MsG0880042122.01.T01:CDS
CTTTAGGGTGTTGAAGGTAG+TGG 0.502252 8:+4039089 MsG0880042122.01.T01:intron
TTGAAACTTGGGGAGTGTAT+TGG 0.502535 8:-4041052 None:intergenic
TAAGTGCTGAATCAAAGTTA+AGG 0.502693 8:-4038169 None:intergenic
GTCTTCAGTGAACACAAAGA+TGG 0.504687 8:+4040206 MsG0880042122.01.T01:CDS
AAAGAAAATTAAGGCAAATG+AGG 0.506222 8:+4039127 MsG0880042122.01.T01:CDS
GCAACAAGAAAATGATAGAA+TGG 0.507282 8:+4038625 MsG0880042122.01.T01:CDS
CTTTGAACAAAACCAGGATC+AGG 0.511674 8:-4038404 None:intergenic
GTCATTGCAGCGTCAAGTTG+AGG 0.516912 8:+4040078 MsG0880042122.01.T01:CDS
CTTCTCCAAGATCTTGTACC+AGG 0.517031 8:+4039835 MsG0880042122.01.T01:CDS
TTGTTTACCTTATTGCAGCC+TGG 0.519916 8:-4039853 None:intergenic
AGAAAATGATAGAATGGAAG+TGG 0.520012 8:+4038631 MsG0880042122.01.T01:CDS
ATAACATTCCTAATACAAAT+GGG 0.521184 8:+4040485 MsG0880042122.01.T01:CDS
TTCATCATTGGTACAACCAA+AGG 0.522984 8:-4038326 None:intergenic
CTAAATGGATTTCATGAAGG+TGG 0.524147 8:+4040577 MsG0880042122.01.T01:CDS
TGATTGTAAATAGGTTAGGA+GGG 0.531230 8:+4039789 MsG0880042122.01.T01:intron
AGAAAAGCTTCTTCTTCCAA+AGG 0.537859 8:+4038746 MsG0880042122.01.T01:CDS
AAATCTGCCACATTAGACAT+TGG 0.540075 8:-4038377 None:intergenic
TCATCATTGGTACAACCAAA+GGG 0.546397 8:-4038325 None:intergenic
TGGAGGAAGAGACCAAAGAA+GGG 0.551819 8:+4039180 MsG0880042122.01.T01:CDS
CAATGAGAGAGGTAACCAAA+TGG 0.556438 8:+4038463 MsG0880042122.01.T01:CDS
GTGGTGATGATGTAGCTGCT+GGG 0.558812 8:-4038208 None:intergenic
AAGAAAATTAAGGCAAATGA+GGG 0.561150 8:+4039128 MsG0880042122.01.T01:CDS
CCCAAATTGGGACAAGTCAA+CGG 0.562105 8:+4038139 MsG0880042122.01.T01:CDS
GCAGCCCTTTGAACAAAACC+AGG 0.562440 8:-4038410 None:intergenic
GGAGGGAGAAAATAAGTGAG+AGG 0.565662 8:+4039806 MsG0880042122.01.T01:CDS
CAATGGCTCCACTGAGCAGT+GGG 0.574239 8:-4040509 None:intergenic
TTTGTGATGAGGGAATTGAT+AGG 0.574585 8:+4038260 MsG0880042122.01.T01:CDS
TCATGAAATCCATTTAGGAA+AGG 0.586062 8:-4040571 None:intergenic
ATGGAGGAAGAGACCAAAGA+AGG 0.588900 8:+4039179 MsG0880042122.01.T01:CDS
TTTATTACCGTTGAAACTTG+GGG 0.589614 8:-4041062 None:intergenic
TTAAACACCGTTGTTCAGAT+GGG 0.591278 8:+4041001 MsG0880042122.01.T01:CDS
AGCAAGAGTTTCAATGAGAG+AGG 0.594170 8:+4038452 MsG0880042122.01.T01:CDS
TCCATTAACATTCTCTGAGG+AGG 0.599758 8:+4040976 MsG0880042122.01.T01:CDS
CCAATGGCTCCACTGAGCAG+TGG 0.605881 8:-4040510 None:intergenic
GGAAGTGGCTAATTCTCAAG+AGG 0.609764 8:+4038646 MsG0880042122.01.T01:CDS
ATACACTCCCCAAGTTTCAA+CGG 0.637097 8:+4041055 MsG0880042122.01.T01:CDS
TGGTGATGATGTAGCTGCTG+GGG 0.642200 8:-4038207 None:intergenic
AAATGGTATCAAGAATATGG+AGG 0.642262 8:+4039163 MsG0880042122.01.T01:CDS
ATTCATGTCAGAGCAAGAAG+AGG 0.647303 8:+4039257 MsG0880042122.01.T01:CDS
TGGCACAAAGAAGAATCCAA+TGG 0.648457 8:-4040526 None:intergenic
GGTTGTTGCCCATAAAAGGA+TGG 0.650244 8:-4040439 None:intergenic
CCCATAAAAGGATGGTACTG+AGG 0.650891 8:-4040431 None:intergenic
GCCAAATCCCATCTGAACAA+CGG 0.655409 8:-4041008 None:intergenic
AAACTCTTCCAATCCAACAA+AGG 0.664009 8:+4038778 MsG0880042122.01.T01:CDS
AAATGGGACCCACTGCTCAG+TGG 0.666661 8:+4040501 MsG0880042122.01.T01:CDS
GGAGGAAGAGACCAAAGAAG+GGG 0.668214 8:+4039181 MsG0880042122.01.T01:CDS
GTATCCATTAACATTCTCTG+AGG 0.704907 8:+4040973 MsG0880042122.01.T01:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTGATATTACATAAAATTA+TGG + Chr8:4039390-4039409 MsG0880042122.01.T01:intron 10.0%
!!! AAATAAGTTTTGATTAATTA+AGG - Chr8:4041169-4041188 None:intergenic 10.0%
!!! AATTAATCAAAACTTATTTT+TGG + Chr8:4041170-4041189 MsG0880042122.01.T01:intron 10.0%
!!! ATAATTTTATGTAATATCAA+AGG - Chr8:4039391-4039410 None:intergenic 10.0%
!!! TCAATTTTTTTTTTTTATGT+TGG + Chr8:4039039-4039058 MsG0880042122.01.T01:intron 10.0%
!!! TTTTGTTATGTTTTAAATTA+AGG - Chr8:4039720-4039739 None:intergenic 10.0%
!!! TTTTTTTTTTTTTGAAAGAA+AGG + Chr8:4039880-4039899 MsG0880042122.01.T01:intron 10.0%
!! AACAAAAAAAAAATTCGATA+GGG - Chr8:4039340-4039359 None:intergenic 15.0%
!! AATTATTAATTATACCTTGT+AGG + Chr8:4040009-4040028 MsG0880042122.01.T01:intron 15.0%
!! AGGTATAATTAATAATTCAT+AGG - Chr8:4040006-4040025 None:intergenic 15.0%
!!! ATATTTTAGTCAAAATAAAC+CGG - Chr8:4038942-4038961 None:intergenic 15.0%
!!! ATTAAAATGTCATTTTCATT+TGG + Chr8:4041129-4041148 MsG0880042122.01.T01:intron 15.0%
!!! TTTTTTTTTTGTTGTGAAAT+TGG + Chr8:4039347-4039366 MsG0880042122.01.T01:intron 15.0%
!! AATAACATTCCTAATACAAA+TGG + Chr8:4040484-4040503 MsG0880042122.01.T01:CDS 20.0%
!! ATAACATTCCTAATACAAAT+GGG + Chr8:4040485-4040504 MsG0880042122.01.T01:CDS 20.0%
!! ATGAATCTTTGATTGTAAAT+AGG + Chr8:4039780-4039799 MsG0880042122.01.T01:intron 20.0%
!! ATTAATTAAGGTCAAATTTC+TGG - Chr8:4041157-4041176 None:intergenic 20.0%
!! CAACAAAAAAAAAATTCGAT+AGG - Chr8:4039341-4039360 None:intergenic 20.0%
!! CTTAAATGCAAAGAAAATTA+AGG + Chr8:4039118-4039137 MsG0880042122.01.T01:CDS 20.0%
!! CTTCATATATTAGTACATAT+GGG - Chr8:4040890-4040909 None:intergenic 20.0%
!! TATAGAATTAAGATGCTTAT+TGG - Chr8:4040118-4040137 None:intergenic 20.0%
!!! AAATATCTGAAATCACAAAA+AGG - Chr8:4040368-4040387 None:intergenic 20.0%
!!! GCATATTTTCTTTGATAAAA+TGG - Chr8:4038352-4038371 None:intergenic 20.0%
!!! TTTGTACTTTTTCACTAATT+TGG + Chr8:4039975-4039994 MsG0880042122.01.T01:intron 20.0%
! AAAGAAAATTAAGGCAAATG+AGG + Chr8:4039127-4039146 MsG0880042122.01.T01:CDS 25.0%
! AACCAGAATACAAAACAAAT+TGG + Chr8:4039928-4039947 MsG0880042122.01.T01:intron 25.0%
! AAGAAAATTAAGGCAAATGA+GGG + Chr8:4039128-4039147 MsG0880042122.01.T01:CDS 25.0%
! AATGCATGCCAATATTATTA+TGG - Chr8:4040549-4040568 None:intergenic 25.0%
! ATCCAGCATTTAAAAAGAAT+TGG - Chr8:4038085-4038104 None:intergenic 25.0%
! CAGTTAAAAAGTTCATTAAC+CGG - Chr8:4040761-4040780 None:intergenic 25.0%
! CCATATGTACTAATATATGA+AGG + Chr8:4040888-4040907 MsG0880042122.01.T01:intron 25.0%
! CCTTCATATATTAGTACATA+TGG - Chr8:4040891-4040910 None:intergenic 25.0%
! GAATGTTATTATGAATAGCT+TGG - Chr8:4040474-4040493 None:intergenic 25.0%
! GTCTTAATTATCTGATTCAT+AGG - Chr8:4040810-4040829 None:intergenic 25.0%
! TCAAAGATCTCATACTTTAA+TGG + Chr8:4038508-4038527 MsG0880042122.01.T01:CDS 25.0%
! TCTCATACTTTAATGGAAAA+TGG + Chr8:4038515-4038534 MsG0880042122.01.T01:CDS 25.0%
! TCTTTGATTGTAAATAGGTT+AGG + Chr8:4039785-4039804 MsG0880042122.01.T01:intron 25.0%
! TCTTTGTGCCATAATAATAT+TGG + Chr8:4040538-4040557 MsG0880042122.01.T01:CDS 25.0%
! TGAAAATGGTATCAAGAATA+TGG + Chr8:4039160-4039179 MsG0880042122.01.T01:CDS 25.0%
! TTCCAAAAACATGATATTGT+GGG + Chr8:4039668-4039687 MsG0880042122.01.T01:intron 25.0%
! TTGATAAAATGGTTCATCAT+TGG - Chr8:4038341-4038360 None:intergenic 25.0%
!! AACCAATTCTTTTTAAATGC+TGG + Chr8:4038080-4038099 MsG0880042122.01.T01:CDS 25.0%
!! ACATGAATGTAATCTTTTTG+AGG - Chr8:4039245-4039264 None:intergenic 25.0%
!! CAATGAAAATTTTGTGATGA+GGG + Chr8:4038250-4038269 MsG0880042122.01.T01:CDS 25.0%
!! GATGACAAAAAGTCTAAAAT+GGG - Chr8:4038840-4038859 None:intergenic 25.0%
!! TTTTATTACCGTTGAAACTT+GGG - Chr8:4041066-4041085 None:intergenic 25.0%
!! TTTTCTTGCTCATTAAGTTA+TGG + Chr8:4040153-4040172 MsG0880042122.01.T01:intron 25.0%
!!! AAAGAATTGGTTTTCCATAA+TGG - Chr8:4038072-4038091 None:intergenic 25.0%
!!! AAATTTTAGTCCATAGAGTA+TGG + Chr8:4038905-4038924 MsG0880042122.01.T01:intron 25.0%
!!! AACCAATTTGTTTTGTATTC+TGG - Chr8:4039933-4039952 None:intergenic 25.0%
!!! ATCTCATTTCTTTTGACTTT+AGG + Chr8:4039073-4039092 MsG0880042122.01.T01:intron 25.0%
!!! ATTGTTTTTTCAACCCAAAT+TGG + Chr8:4038126-4038145 MsG0880042122.01.T01:CDS 25.0%
!!! TAAAAACATATTTTAGTCCC+CGG - Chr8:4039004-4039023 None:intergenic 25.0%
!!! TCTCATTTCTTTTGACTTTA+GGG + Chr8:4039074-4039093 MsG0880042122.01.T01:intron 25.0%
!!! TTGAGTGTTACAATTTTTTC+CGG + Chr8:4038982-4039001 MsG0880042122.01.T01:intron 25.0%
!!! TTGTTTTTTCAACCCAAATT+GGG + Chr8:4038127-4038146 MsG0880042122.01.T01:CDS 25.0%
AAATGGTATCAAGAATATGG+AGG + Chr8:4039163-4039182 MsG0880042122.01.T01:CDS 30.0%
AATACACCAAATGGAGAAAT+TGG + Chr8:4038689-4038708 MsG0880042122.01.T01:CDS 30.0%
AATTATACCTTGTAGGTTAC+TGG + Chr8:4040016-4040035 MsG0880042122.01.T01:intron 30.0%
ACAATTTAGTCCATACTCTA+TGG - Chr8:4038918-4038937 None:intergenic 30.0%
AGAAAATGATAGAATGGAAG+TGG + Chr8:4038631-4038650 MsG0880042122.01.T01:CDS 30.0%
AGGGAATTGATAGGAAAATT+GGG + Chr8:4038269-4038288 MsG0880042122.01.T01:CDS 30.0%
ATGCATTTACCTTTCCTAAA+TGG + Chr8:4040562-4040581 MsG0880042122.01.T01:CDS 30.0%
ATTAGTACATATGGGACAAT+TGG - Chr8:4040882-4040901 None:intergenic 30.0%
CGATGACAAAAAGTCTAAAA+TGG - Chr8:4038841-4038860 None:intergenic 30.0%
CTTCACATGATATGAATTCA+AGG + Chr8:4038720-4038739 MsG0880042122.01.T01:CDS 30.0%
CTTCCAAAAACATGATATTG+TGG + Chr8:4039667-4039686 MsG0880042122.01.T01:intron 30.0%
GCAACAAGAAAATGATAGAA+TGG + Chr8:4038625-4038644 MsG0880042122.01.T01:CDS 30.0%
TAACTGAATTTCAAACCATC+AGG + Chr8:4040775-4040794 MsG0880042122.01.T01:intron 30.0%
TCATGAAATCCATTTAGGAA+AGG - Chr8:4040574-4040593 None:intergenic 30.0%
TGAAAAAACAATCTTGGGTT+TGG - Chr8:4038118-4038137 None:intergenic 30.0%
TGATTGTAAATAGGTTAGGA+GGG + Chr8:4039789-4039808 MsG0880042122.01.T01:intron 30.0%
TTAAGGTTTGCAACTACTAT+TGG - Chr8:4039703-4039722 None:intergenic 30.0%
TTAGTACATATGGGACAATT+GGG - Chr8:4040881-4040900 None:intergenic 30.0%
TTCAACAACCACTAATATGT+TGG - Chr8:4039496-4039515 None:intergenic 30.0%
TTGATTGTAAATAGGTTAGG+AGG + Chr8:4039788-4039807 MsG0880042122.01.T01:intron 30.0%
TTGCACTGTAATCATATCAA+TGG - Chr8:4039609-4039628 None:intergenic 30.0%
TTTATTACCGTTGAAACTTG+GGG - Chr8:4041065-4041084 None:intergenic 30.0%
! ATAGGAAAATTGGGAACTTT+TGG + Chr8:4038278-4038297 MsG0880042122.01.T01:CDS 30.0%
! ATTTTCATTGGACATGTTGT+TGG - Chr8:4038240-4038259 None:intergenic 30.0%
! CCAATGAAAATTTTGTGATG+AGG + Chr8:4038249-4038268 MsG0880042122.01.T01:CDS 30.0%
! CCTCATCACAAAATTTTCAT+TGG - Chr8:4038252-4038271 None:intergenic 30.0%
! CTATCATTTTCTTGTTGCAA+TGG - Chr8:4038623-4038642 None:intergenic 30.0%
! CTGAATCAAAGTTAAGGTTT+TGG - Chr8:4038166-4038185 None:intergenic 30.0%
! TGGGTTGAAAAAACAATCTT+GGG - Chr8:4038123-4038142 None:intergenic 30.0%
! TTCCTAAATGGATTTCATGA+AGG + Chr8:4040574-4040593 MsG0880042122.01.T01:CDS 30.0%
! TTTTCATTGGACATGTTGTT+GGG - Chr8:4038239-4038258 None:intergenic 30.0%
!! GTTTTATTACCGTTGAAACT+TGG - Chr8:4041067-4041086 None:intergenic 30.0%
!! TAAGTGCTGAATCAAAGTTA+AGG - Chr8:4038172-4038191 None:intergenic 30.0%
!! TTGGGTTGAAAAAACAATCT+TGG - Chr8:4038124-4038143 None:intergenic 30.0%
!!! ATGTAATCTTTTTGAGGTTC+AGG - Chr8:4039239-4039258 None:intergenic 30.0%
!!! TGAGTGTTACAATTTTTTCC+GGG + Chr8:4038983-4039002 MsG0880042122.01.T01:intron 30.0%
AAACTCTTCCAATCCAACAA+AGG + Chr8:4038778-4038797 MsG0880042122.01.T01:CDS 35.0%
AAATCTGCCACATTAGACAT+TGG - Chr8:4038380-4038399 None:intergenic 35.0%
ACAACATTCTTCTAACCCTT+TGG + Chr8:4038310-4038329 MsG0880042122.01.T01:CDS 35.0%
AGAAAAGCTTCTTCTTCCAA+AGG + Chr8:4038746-4038765 MsG0880042122.01.T01:CDS 35.0%
AGTCCATCACTCAAAACATT+TGG + Chr8:4038563-4038582 MsG0880042122.01.T01:CDS 35.0%
ATCAAGTGATTGAGTTCTAC+CGG + Chr8:4040739-4040758 MsG0880042122.01.T01:intron 35.0%
ATGGAGAATTCTTGTTCTCA+TGG - Chr8:4038604-4038623 None:intergenic 35.0%
CAACATTGTTCATCACCATT+TGG - Chr8:4038481-4038500 None:intergenic 35.0%
CACCTTCATGAAATCCATTT+AGG - Chr8:4040579-4040598 None:intergenic 35.0%
CTTTAGTGCTTTACCTTTGT+TGG - Chr8:4038794-4038813 None:intergenic 35.0%
GAGGGAATTGATAGGAAAAT+TGG + Chr8:4038268-4038287 MsG0880042122.01.T01:CDS 35.0%
GCAAAAACCAATGTCTAATG+TGG + Chr8:4038370-4038389 MsG0880042122.01.T01:CDS 35.0%
GCAACTACTATTGGATATTG+TGG - Chr8:4039694-4039713 None:intergenic 35.0%
GTATCCATTAACATTCTCTG+AGG + Chr8:4040973-4040992 MsG0880042122.01.T01:intron 35.0%
TCATCATTGGTACAACCAAA+GGG - Chr8:4038328-4038347 None:intergenic 35.0%
TCTGAGCAAAATACACCAAA+TGG + Chr8:4038680-4038699 MsG0880042122.01.T01:CDS 35.0%
TTAAACACCGTTGTTCAGAT+GGG + Chr8:4041001-4041020 MsG0880042122.01.T01:CDS 35.0%
TTCATCATTGGTACAACCAA+AGG - Chr8:4038329-4038348 None:intergenic 35.0%
TTGACACCAATTTCTCCATT+TGG - Chr8:4038698-4038717 None:intergenic 35.0%
TTTGTGATGAGGGAATTGAT+AGG + Chr8:4038260-4038279 MsG0880042122.01.T01:CDS 35.0%
! ATGGTACTGAGGAATCTAAT+TGG - Chr8:4040423-4040442 None:intergenic 35.0%
! CTAAATGGATTTCATGAAGG+TGG + Chr8:4040577-4040596 MsG0880042122.01.T01:CDS 35.0%
! GAGTATGGACTAAATTGTTC+CGG + Chr8:4038920-4038939 MsG0880042122.01.T01:intron 35.0%
! GCTGCAAAATTTTCTTGCTT+TGG + Chr8:4038428-4038447 MsG0880042122.01.T01:CDS 35.0%
! GTGTATTCCTGTTTGAAGTT+TGG - Chr8:4041033-4041052 None:intergenic 35.0%
! TTTGTTGGATTGGAAGAGTT+TGG - Chr8:4038779-4038798 None:intergenic 35.0%
!! GATCCAAATGTTTTGAGTGA+TGG - Chr8:4038569-4038588 None:intergenic 35.0%
!! TGATTGATTTGAACCTGCAT+TGG - Chr8:4041197-4041216 None:intergenic 35.0%
!!! ACTTATTTTTGGTCCAATGC+AGG + Chr8:4041181-4041200 MsG0880042122.01.T01:intron 35.0%
!!! ATGAATAGCTTGGTTTTGCT+GGG - Chr8:4040464-4040483 None:intergenic 35.0%
!!! GAGTGTTACAATTTTTTCCG+GGG + Chr8:4038984-4039003 MsG0880042122.01.T01:intron 35.0%
!!! GCTGCAATTTTTTAAGAGTG+CGG + Chr8:4038813-4038832 MsG0880042122.01.T01:intron 35.0%
!!! TAATCTTTTTGAGGTTCAGG+AGG - Chr8:4039236-4039255 None:intergenic 35.0%
!!! TATGAATAGCTTGGTTTTGC+TGG - Chr8:4040465-4040484 None:intergenic 35.0%
!!! TGATCCTGGTTTTGTTCAAA+GGG + Chr8:4038406-4038425 MsG0880042122.01.T01:CDS 35.0%
!!! TTTTGACTTTAGGGTGTTGA+AGG + Chr8:4039083-4039102 MsG0880042122.01.T01:intron 35.0%
ACAGTGCAAACGCGTTAAAT+CGG + Chr8:4039620-4039639 MsG0880042122.01.T01:intron 40.0%
AGCAAGAGTTTCAATGAGAG+AGG + Chr8:4038452-4038471 MsG0880042122.01.T01:CDS 40.0%
AGTGGTTGTTGAATCGAGAT+CGG + Chr8:4039503-4039522 MsG0880042122.01.T01:intron 40.0%
ATACACTCCCCAAGTTTCAA+CGG + Chr8:4041055-4041074 MsG0880042122.01.T01:CDS 40.0%
ATTCATGTCAGAGCAAGAAG+AGG + Chr8:4039257-4039276 MsG0880042122.01.T01:CDS 40.0%
ATTTCATGAAGGTGGTTCTC+AGG + Chr8:4040585-4040604 MsG0880042122.01.T01:CDS 40.0%
CAATGAGAGAGGTAACCAAA+TGG + Chr8:4038463-4038482 MsG0880042122.01.T01:CDS 40.0%
CTTAAACACCGTTGTTCAGA+TGG + Chr8:4041000-4041019 MsG0880042122.01.T01:CDS 40.0%
CTTTGAACAAAACCAGGATC+AGG - Chr8:4038407-4038426 None:intergenic 40.0%
GAGGGTGAGAGAAATGAAAA+TGG + Chr8:4039146-4039165 MsG0880042122.01.T01:CDS 40.0%
GATTTGGCCAAACTTCAAAC+AGG + Chr8:4041023-4041042 MsG0880042122.01.T01:CDS 40.0%
GTCTTCAGTGAACACAAAGA+TGG + Chr8:4040206-4040225 MsG0880042122.01.T01:CDS 40.0%
GTGCTTTACCTTTGTTGGAT+TGG - Chr8:4038789-4038808 None:intergenic 40.0%
TCATGCAGCCAACATATTAG+TGG + Chr8:4039485-4039504 MsG0880042122.01.T01:intron 40.0%
TCCTCCTCAGAGAATGTTAA+TGG - Chr8:4040980-4040999 None:intergenic 40.0%
TGGCACAAAGAAGAATCCAA+TGG - Chr8:4040529-4040548 None:intergenic 40.0%
TTGGACATGTTGTTGGGATT+TGG - Chr8:4038233-4038252 None:intergenic 40.0%
TTGTTTACCTTATTGCAGCC+TGG - Chr8:4039856-4039875 None:intergenic 40.0%
! CCTCAGTACCATCCTTTTAT+GGG + Chr8:4040431-4040450 MsG0880042122.01.T01:CDS 40.0%
! GGCCCACAATATCATGTTTT+TGG - Chr8:4039673-4039692 None:intergenic 40.0%
! TCCATTAACATTCTCTGAGG+AGG + Chr8:4040976-4040995 MsG0880042122.01.T01:CDS 40.0%
! TCCTCAGTACCATCCTTTTA+TGG + Chr8:4040430-4040449 MsG0880042122.01.T01:CDS 40.0%
! TGCTTTTCCAGTAACCTACA+AGG - Chr8:4040026-4040045 None:intergenic 40.0%
! TTGAAACTTGGGGAGTGTAT+TGG - Chr8:4041055-4041074 None:intergenic 40.0%
!! CTGTTTTTCTTCCCCTTCTT+TGG - Chr8:4039195-4039214 None:intergenic 40.0%
!!! AGAGTTTGGTGCTTTTCCTT+TGG - Chr8:4038765-4038784 None:intergenic 40.0%
!!! CTGATCCTGGTTTTGTTCAA+AGG + Chr8:4038405-4038424 MsG0880042122.01.T01:CDS 40.0%
!!! TGAATAGCTTGGTTTTGCTG+GGG - Chr8:4040463-4040482 None:intergenic 40.0%
ACCGTTGTTCAGATGGGATT+TGG + Chr8:4041007-4041026 MsG0880042122.01.T01:CDS 45.0%
ATGGAGGAAGAGACCAAAGA+AGG + Chr8:4039179-4039198 MsG0880042122.01.T01:CDS 45.0%
CAAACGCGTTAAATCGGTGA+TGG + Chr8:4039626-4039645 MsG0880042122.01.T01:intron 45.0%
CAGTGGGTCCCATTTGTATT+AGG - Chr8:4040496-4040515 None:intergenic 45.0%
CATAGGAATAACGAGCCTGA+TGG - Chr8:4040793-4040812 None:intergenic 45.0%
CCCAAATTGGGACAAGTCAA+CGG + Chr8:4038139-4038158 MsG0880042122.01.T01:CDS 45.0%
CCCATAAAAGGATGGTACTG+AGG - Chr8:4040434-4040453 None:intergenic 45.0%
CTGCATGAATGCATGCAACA+CGG - Chr8:4039473-4039492 None:intergenic 45.0%
CTTCTCCAAGATCTTGTACC+AGG + Chr8:4039835-4039854 MsG0880042122.01.T01:CDS 45.0%
GACATGTTGTTGGGATTTGG+TGG - Chr8:4038230-4038249 None:intergenic 45.0%
GCCAAATCCCATCTGAACAA+CGG - Chr8:4041011-4041030 None:intergenic 45.0%
GGAAGTGGCTAATTCTCAAG+AGG + Chr8:4038646-4038665 MsG0880042122.01.T01:CDS 45.0%
GGAGGGAGAAAATAAGTGAG+AGG + Chr8:4039806-4039825 MsG0880042122.01.T01:CDS 45.0%
GGTTGTTGCCCATAAAAGGA+TGG - Chr8:4040442-4040461 None:intergenic 45.0%
GTGGTTGTTGAATCGAGATC+GGG + Chr8:4039504-4039523 MsG0880042122.01.T01:intron 45.0%
TCTTGTACCAGGCTGCAATA+AGG + Chr8:4039846-4039865 MsG0880042122.01.T01:CDS 45.0%
TGGAGGAAGAGACCAAAGAA+GGG + Chr8:4039180-4039199 MsG0880042122.01.T01:CDS 45.0%
! GCAGATTTTTCACCTGATCC+TGG + Chr8:4038392-4038411 MsG0880042122.01.T01:CDS 45.0%
!! CCGTTGACTTGTCCCAATTT+GGG - Chr8:4038142-4038161 None:intergenic 45.0%
!! CTTTAGGGTGTTGAAGGTAG+TGG + Chr8:4039089-4039108 MsG0880042122.01.T01:intron 45.0%
!! TCCGTTGACTTGTCCCAATT+TGG - Chr8:4038143-4038162 None:intergenic 45.0%
!! GAAAATAAATAAATAAAAAA+AGG - Chr8:4040346-4040365 None:intergenic 5.0%
!!! AAATTTGTTTAAATTTTTTA+CGG - Chr8:4038891-4038910 None:intergenic 5.0%
CTGGGGTTGTTGCCCATAAA+AGG - Chr8:4040446-4040465 None:intergenic 50.0%
GCAGCCCTTTGAACAAAACC+AGG - Chr8:4038413-4038432 None:intergenic 50.0%
GGAGGAAGAGACCAAAGAAG+GGG + Chr8:4039181-4039200 MsG0880042122.01.T01:CDS 50.0%
TGCAGCCTGGTACAAGATCT+TGG - Chr8:4039843-4039862 None:intergenic 50.0%
! GTCATTGCAGCGTCAAGTTG+AGG + Chr8:4040078-4040097 MsG0880042122.01.T01:CDS 50.0%
! GTGGTGATGATGTAGCTGCT+GGG - Chr8:4038211-4038230 None:intergenic 50.0%
! TGGTGATGATGTAGCTGCTG+GGG - Chr8:4038210-4038229 None:intergenic 50.0%
AAATGGGACCCACTGCTCAG+TGG + Chr8:4040501-4040520 MsG0880042122.01.T01:CDS 55.0%
CAATGGCTCCACTGAGCAGT+GGG - Chr8:4040512-4040531 None:intergenic 55.0%
! GGTGGTGATGATGTAGCTGC+TGG - Chr8:4038212-4038231 None:intergenic 55.0%
CCAATGGCTCCACTGAGCAG+TGG - Chr8:4040513-4040532 None:intergenic 60.0%
CCACTGCTCAGTGGAGCCAT+TGG + Chr8:4040510-4040529 MsG0880042122.01.T01:CDS 60.0%
Chromosome Type Strat End Strand Name
Chr8 gene 4038068 4041240 4038068 ID=MsG0880042122.01;Name=MsG0880042122.01
Chr8 mRNA 4038068 4041240 4038068 ID=MsG0880042122.01.T01;Parent=MsG0880042122.01;Name=MsG0880042122.01.T01;_AED=0.31;_eAED=0.31;_QI=0|0|0|1|1|1|8|0|508
Chr8 exon 4038068 4038799 4038068 ID=MsG0880042122.01.T01:exon:2402;Parent=MsG0880042122.01.T01
Chr8 exon 4039095 4039313 4039095 ID=MsG0880042122.01.T01:exon:2403;Parent=MsG0880042122.01.T01
Chr8 exon 4039802 4039867 4039802 ID=MsG0880042122.01.T01:exon:2404;Parent=MsG0880042122.01.T01
Chr8 exon 4040031 4040099 4040031 ID=MsG0880042122.01.T01:exon:2405;Parent=MsG0880042122.01.T01
Chr8 exon 4040189 4040263 4040189 ID=MsG0880042122.01.T01:exon:2406;Parent=MsG0880042122.01.T01
Chr8 exon 4040382 4040606 4040382 ID=MsG0880042122.01.T01:exon:2407;Parent=MsG0880042122.01.T01
Chr8 exon 4040974 4041076 4040974 ID=MsG0880042122.01.T01:exon:2408;Parent=MsG0880042122.01.T01
Chr8 exon 4041203 4041240 4041203 ID=MsG0880042122.01.T01:exon:2409;Parent=MsG0880042122.01.T01
Chr8 CDS 4038068 4038799 4038068 ID=MsG0880042122.01.T01:cds;Parent=MsG0880042122.01.T01
Chr8 CDS 4039095 4039313 4039095 ID=MsG0880042122.01.T01:cds;Parent=MsG0880042122.01.T01
Chr8 CDS 4039802 4039867 4039802 ID=MsG0880042122.01.T01:cds;Parent=MsG0880042122.01.T01
Chr8 CDS 4040031 4040099 4040031 ID=MsG0880042122.01.T01:cds;Parent=MsG0880042122.01.T01
Chr8 CDS 4040189 4040263 4040189 ID=MsG0880042122.01.T01:cds;Parent=MsG0880042122.01.T01
Chr8 CDS 4040382 4040606 4040382 ID=MsG0880042122.01.T01:cds;Parent=MsG0880042122.01.T01
Chr8 CDS 4040974 4041076 4040974 ID=MsG0880042122.01.T01:cds;Parent=MsG0880042122.01.T01
Chr8 CDS 4041203 4041240 4041203 ID=MsG0880042122.01.T01:cds;Parent=MsG0880042122.01.T01
Gene Sequence

>MsG0880042122.01.T01

TCCATTATGGAAAACCAATTCTTTTTAAATGCTGGATTTGAAACTTACCAAACCCAAGATTGTTTTTTCAACCCAAATTGGGACAAGTCAACGGACCAAAACCTTAACTTTGATTCAGCACTTAGTTCAATTGTCTCATCCCCAGCAGCTACATCATCACCACCAAATCCCAACAACATGTCCAATGAAAATTTTGTGATGAGGGAATTGATAGGAAAATTGGGAACTTTTGGTGAGATCTCACAACATTCTTCTAACCCTTTGGTTGTACCAATGATGAACCATTTTATCAAAGAAAATATGCAAAAACCAATGTCTAATGTGGCAGATTTTTCACCTGATCCTGGTTTTGTTCAAAGGGCTGCAAAATTTTCTTGCTTTGGTAGCAAGAGTTTCAATGAGAGAGGTAACCAAATGGTGATGAACAATGTTGAGTTAGCTCAAAGATCTCATACTTTAATGGAAAATGGAATGAAGTTATCAAGAGTTTCTAGTAGTCCATCACTCAAAACATTTGGATCTCAAATGATGAACCATGAGAACAAGAATTCTCCATTGCAACAAGAAAATGATAGAATGGAAGTGGCTAATTCTCAAGAGGAATCTACAATATCTGAGCAAAATACACCAAATGGAGAAATTGGTGTCAAAGCTTCACATGATATGAATTCAAGGAAGAGAAAAGCTTCTTCTTCCAAAGGAAAAGCACCAAACTCTTCCAATCCAACAAAGGGTGTTGAAGGTAGTGGTGAAGACTTAAATGCAAAGAAAATTAAGGCAAATGAGGGTGAGAGAAATGAAAATGGTATCAAGAATATGGAGGAAGAGACCAAAGAAGGGGAAGAAAAACAGAACAAGAGTGACTCAAAACCTCCTGAACCTCAAAAAGATTACATTCATGTCAGAGCAAGAAGAGGTCAAGCTACTGACAGTCACAGTCTTGCAGAACGAGTTAGGAGGGAGAAAATAAGTGAGAGGATGAAACTTCTCCAAGATCTTGTACCAGGCTGCAATAAGGTTACTGGAAAAGCACTTATGCTTGATGAAATTATAAATTATGTTCAGTCATTGCAGCGTCAAGTTGAGTTTTTGTCTATGAAATTGTCTTCAGTGAACACAAAGATGGATTTAAGTATTGAAAGTCTTGTTGTATCAAAAGATATATTTCAATCAAATAATTCTTTGCAAAACTCAATGTTCCAATTAGATTCCTCAGTACCATCCTTTTATGGGCAACAACCCCAGCAAAACCAAGCTATTCATAATAACATTCCTAATACAAATGGGACCCACTGCTCAGTGGAGCCATTGGATTCTTCTTTGTGCCATAATAATATTGGCATGCATTTACCTTTCCTAAATGGATTTCATGAAGGTGGTTCTCAGTATCCATTAACATTCTCTGAGGAGGACTTAAACACCGTTGTTCAGATGGGATTTGGCCAAACTTCAAACAGGAATACACCAATACACTCCCCAAGTTTCAACGGTTCAAATCAATCAACACAAATGAAAATTGAGCTCTAA

Protein sequence

>MsG0880042122.01.T01

SIMENQFFLNAGFETYQTQDCFFNPNWDKSTDQNLNFDSALSSIVSSPAATSSPPNPNNMSNENFVMRELIGKLGTFGEISQHSSNPLVVPMMNHFIKENMQKPMSNVADFSPDPGFVQRAAKFSCFGSKSFNERGNQMVMNNVELAQRSHTLMENGMKLSRVSSSPSLKTFGSQMMNHENKNSPLQQENDRMEVANSQEESTISEQNTPNGEIGVKASHDMNSRKRKASSSKGKAPNSSNPTKGVEGSGEDLNAKKIKANEGERNENGIKNMEEETKEGEEKQNKSDSKPPEPQKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLSSVNTKMDLSIESLVVSKDIFQSNNSLQNSMFQLDSSVPSFYGQQPQQNQAIHNNIPNTNGTHCSVEPLDSSLCHNNIGMHLPFLNGFHEGGSQYPLTFSEEDLNTVVQMGFGQTSNRNTPIHSPSFNGSNQSTQMKIEL*