AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280007786.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280007786.01.T01 MTR_2g032030 96.495 485 6 5 1 476 1 483 0.0 942
MsG0280007786.01.T01 MTR_2g032030 95.904 415 6 5 1 406 1 413 0.0 796
MsG0280007786.01.T01 MTR_7g079040 49.479 192 70 5 231 422 135 299 6.76e-48 168
MsG0280007786.01.T01 MTR_8g028565 41.892 222 98 4 231 452 136 326 3.31e-44 158
MsG0280007786.01.T01 MTR_7g109600 42.449 245 103 11 209 422 4 241 1.13e-39 144
MsG0280007786.01.T01 MTR_8g087000 65.625 96 31 1 231 324 45 140 1.66e-37 137
MsG0280007786.01.T01 MTR_1g099600 61.165 103 31 1 231 333 165 258 2.81e-37 139
MsG0280007786.01.T01 MTR_8g087000 65.957 94 30 1 233 324 48 141 1.16e-36 135
MsG0280007786.01.T01 MTR_2g083870 55.556 117 46 2 214 324 28 144 3.58e-35 132
MsG0280007786.01.T01 MTR_8g098945 68.235 85 23 1 260 344 129 209 1.86e-34 130
MsG0280007786.01.T01 MTR_2g016770 53.279 122 47 2 232 353 11 122 1.15e-32 124
MsG0280007786.01.T01 MTR_2g016770 52.756 127 50 2 233 359 4 120 2.36e-32 122
MsG0280007786.01.T01 MTR_4g127040 59.770 87 30 1 231 317 221 302 3.17e-29 117
MsG0280007786.01.T01 MTR_1g009613 57.955 88 32 2 230 317 237 319 4.75e-29 117
MsG0280007786.01.T01 MTR_5g016610 56.842 95 36 2 223 317 167 256 1.39e-27 111
MsG0280007786.01.T01 MTR_4g094908 57.471 87 32 2 231 317 242 323 6.13e-26 108
MsG0280007786.01.T01 MTR_1g070455 53.846 91 36 3 233 322 271 356 9.52e-25 105
MsG0280007786.01.T01 MTR_3g108960 48.454 97 45 2 221 317 280 371 2.41e-24 105
MsG0280007786.01.T01 MTR_2g024350 51.948 77 36 1 258 333 6 82 2.36e-23 98.6
MsG0280007786.01.T01 MTR_0117s0040 46.392 97 44 1 221 317 43 131 4.41e-23 98.2
MsG0280007786.01.T01 MTR_2g024380 37.143 140 74 3 198 336 202 328 7.25e-23 101
MsG0280007786.01.T01 MTR_7g109600 41.954 174 65 9 280 422 7 175 3.41e-21 91.7
MsG0280007786.01.T01 MTR_1g086790 52.632 76 34 2 261 335 159 233 3.81e-20 91.7
MsG0280007786.01.T01 MTR_8g069935 50.549 91 34 2 231 320 311 391 1.28e-19 91.7
MsG0280007786.01.T01 MTR_7g110720 52.113 71 34 0 260 330 216 286 9.46e-19 89.0
MsG0280007786.01.T01 MTR_3g053330 41.584 101 58 1 235 335 227 326 1.07e-18 89.0
MsG0280007786.01.T01 MTR_7g110720 52.113 71 34 0 260 330 189 259 1.10e-18 88.2
MsG0280007786.01.T01 MTR_4g094588 57.377 61 25 1 261 321 179 238 1.25e-18 87.4
MsG0280007786.01.T01 MTR_7g011820 51.316 76 36 1 261 336 411 485 1.66e-18 88.6
MsG0280007786.01.T01 MTR_4g007060 49.367 79 39 1 254 332 123 200 7.00e-18 84.3
MsG0280007786.01.T01 MTR_4g082580 41.584 101 52 2 229 323 241 340 7.52e-18 85.5
MsG0280007786.01.T01 MTR_8g067635 50.000 74 36 1 258 330 347 420 7.67e-18 86.7
MsG0280007786.01.T01 MTR_4g007060 49.367 79 39 1 254 332 157 234 7.93e-18 84.7
MsG0280007786.01.T01 MTR_8g087000 71.111 45 13 0 280 324 35 79 1.33e-17 80.9
MsG0280007786.01.T01 MTR_2g023930 57.377 61 26 0 260 320 305 365 1.55e-17 85.5
MsG0280007786.01.T01 MTR_5g042920 47.561 82 39 2 261 339 321 401 5.57e-17 83.6
MsG0280007786.01.T01 MTR_5g091390 55.738 61 26 1 261 321 158 217 6.03e-17 82.0
MsG0280007786.01.T01 MTR_6g053200 43.011 93 53 0 261 353 331 423 6.11e-17 84.0
MsG0280007786.01.T01 MTR_8g067650 48.649 74 37 1 258 330 337 410 9.07e-17 83.2
MsG0280007786.01.T01 MTR_7g109800 39.259 135 70 5 221 348 109 238 1.10e-16 80.9
MsG0280007786.01.T01 MTR_2g105060 43.038 79 45 0 257 335 91 169 1.26e-16 79.7
MsG0280007786.01.T01 MTR_4g049790 40.860 93 48 1 238 330 297 382 1.30e-16 82.8
MsG0280007786.01.T01 MTR_4g094412 54.098 61 28 0 261 321 235 295 1.58e-16 82.4
MsG0280007786.01.T01 MTR_4g094412 54.098 61 28 0 261 321 244 304 1.59e-16 82.4
MsG0280007786.01.T01 MTR_2g105060 43.038 79 45 0 257 335 166 244 1.76e-16 80.5
MsG0280007786.01.T01 MTR_4g132430 53.333 60 28 0 261 320 128 187 1.84e-16 81.3
MsG0280007786.01.T01 MTR_7g009730 48.571 70 36 0 261 330 220 289 1.95e-16 82.4
MsG0280007786.01.T01 MTR_4g049760 45.333 75 41 0 256 330 286 360 2.02e-16 82.0
MsG0280007786.01.T01 MTR_5g067680 40.404 99 53 2 219 315 165 259 2.06e-16 80.9
MsG0280007786.01.T01 MTR_7g062220 43.299 97 48 2 221 317 91 180 2.37e-16 80.1
MsG0280007786.01.T01 MTR_4g132430 53.333 60 28 0 261 320 262 321 2.77e-16 81.6
MsG0280007786.01.T01 MTR_7g080020 40.000 100 53 2 231 324 458 556 6.09e-16 81.3
MsG0280007786.01.T01 MTR_7g080020 47.143 70 35 2 251 320 271 338 2.04e-11 67.0
MsG0280007786.01.T01 MTR_7g100510 55.385 65 28 1 258 322 359 422 6.25e-16 80.1
MsG0280007786.01.T01 MTR_7g100510 39.796 98 46 4 242 330 164 257 3.67e-12 68.6
MsG0280007786.01.T01 MTR_2g045360 39.394 99 59 1 234 332 186 283 1.66e-15 79.0
MsG0280007786.01.T01 MTR_5g043880 54.386 57 25 1 261 317 125 180 1.94e-15 77.0
MsG0280007786.01.T01 MTR_3g056100 42.045 88 41 2 261 339 272 358 2.15e-15 78.6
MsG0280007786.01.T01 MTR_3g056100 42.045 88 41 2 261 339 259 345 2.30e-15 78.6
MsG0280007786.01.T01 MTR_3g104750 38.614 101 57 3 218 318 66 161 2.55e-15 73.9
MsG0280007786.01.T01 MTR_3g056100 45.000 80 34 2 261 331 416 494 3.00e-15 78.6
MsG0280007786.01.T01 MTR_3g056100 45.000 80 34 2 261 331 403 481 3.04e-15 78.6
MsG0280007786.01.T01 MTR_2g088000 45.833 72 39 0 261 332 350 421 3.23e-15 78.6
MsG0280007786.01.T01 MTR_2g033820 51.667 60 28 1 261 320 204 262 3.58e-15 77.4
MsG0280007786.01.T01 MTR_5g094430 47.692 65 33 1 261 325 253 316 3.63e-15 77.8
MsG0280007786.01.T01 MTR_5g094430 47.692 65 33 1 261 325 231 294 3.80e-15 77.8
MsG0280007786.01.T01 MTR_8g092010 40.217 92 47 3 229 320 84 167 4.19e-15 73.9
MsG0280007786.01.T01 MTR_3g106060 42.529 87 38 1 261 347 139 213 5.03e-15 75.9
MsG0280007786.01.T01 MTR_3g095040 35.537 121 74 3 203 321 60 178 5.12e-15 74.3
MsG0280007786.01.T01 MTR_5g094430 47.692 65 33 1 261 325 365 428 5.38e-15 77.8
MsG0280007786.01.T01 MTR_8g027860 31.250 224 111 10 172 385 54 244 1.02e-14 75.9
MsG0280007786.01.T01 MTR_3g090860 42.342 111 56 4 261 368 134 239 1.54e-14 75.1
MsG0280007786.01.T01 MTR_4g107970 51.667 60 29 0 261 320 256 315 1.67e-14 76.3
MsG0280007786.01.T01 MTR_4g107970 51.667 60 29 0 261 320 179 238 1.80e-14 76.3
MsG0280007786.01.T01 MTR_1g013760 42.857 77 39 1 241 317 126 197 2.35e-14 73.9
MsG0280007786.01.T01 MTR_7g080000 39.394 99 53 2 231 323 397 494 3.06e-14 75.9
MsG0280007786.01.T01 MTR_7g080000 50.000 70 33 2 251 320 225 292 2.40e-12 69.7
MsG0280007786.01.T01 MTR_4g122530 42.667 75 42 1 261 335 209 282 3.60e-14 74.7
MsG0280007786.01.T01 MTR_7g079010 42.697 89 47 4 231 318 113 198 4.49e-14 71.6
MsG0280007786.01.T01 MTR_4g047580 41.333 75 44 0 256 330 277 351 5.10e-14 74.7
MsG0280007786.01.T01 MTR_3g009470 46.575 73 37 2 254 325 488 559 6.18e-14 74.7
MsG0280007786.01.T01 MTR_3g009470 49.296 71 33 3 261 330 281 349 6.80e-12 68.2
MsG0280007786.01.T01 MTR_7g117200 39.796 98 45 3 261 352 119 208 7.63e-14 72.8
MsG0280007786.01.T01 MTR_8g007270 33.065 124 73 3 194 317 97 210 9.24e-14 70.9
MsG0280007786.01.T01 MTR_4g013260 46.479 71 36 2 254 323 329 398 9.26e-14 73.6
MsG0280007786.01.T01 MTR_4g013260 49.254 67 31 2 261 325 185 250 2.29e-12 69.3
MsG0280007786.01.T01 MTR_7g028415 45.902 61 32 1 258 318 91 150 1.16e-13 69.3
MsG0280007786.01.T01 MTR_7g028710 45.902 61 32 1 258 318 91 150 1.16e-13 69.3
MsG0280007786.01.T01 MTR_6g086555 44.156 77 41 2 245 320 191 266 1.39e-13 72.8
MsG0280007786.01.T01 MTR_1g077780 49.180 61 30 1 261 321 63 122 2.44e-13 67.8
MsG0280007786.01.T01 MTR_5g074400 38.614 101 53 2 231 323 383 482 3.75e-13 72.0
MsG0280007786.01.T01 MTR_1g015140 34.862 109 66 3 210 318 56 159 3.78e-13 67.8
MsG0280007786.01.T01 MTR_4g130900 47.761 67 32 2 261 325 360 425 4.49e-13 71.6
MsG0280007786.01.T01 MTR_5g097490 48.485 66 33 1 261 326 253 317 5.82e-13 70.9
MsG0280007786.01.T01 MTR_7g071120 42.667 75 41 2 254 327 317 390 1.06e-12 70.5
MsG0280007786.01.T01 MTR_3g031220 46.154 65 34 1 261 325 366 429 1.09e-12 70.5
MsG0280007786.01.T01 MTR_8g092140 46.667 60 31 1 258 317 158 216 1.26e-12 67.8
MsG0280007786.01.T01 MTR_1g013790 42.424 66 38 0 257 322 98 163 1.26e-12 68.2
MsG0280007786.01.T01 MTR_3g095080 46.667 60 31 1 258 317 142 200 2.35e-12 66.6
MsG0280007786.01.T01 MTR_3g095080 46.667 60 31 1 258 317 166 224 2.55e-12 67.0
MsG0280007786.01.T01 MTR_3g009470 49.296 71 33 3 261 330 281 349 6.84e-12 67.8
MsG0280007786.01.T01 MTR_1g078260 46.970 66 33 2 253 317 240 304 8.58e-12 67.4
MsG0280007786.01.T01 MTR_8g099350 50.877 57 26 1 261 315 133 189 3.47e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280007786.01.T01 AT1G30650 40.854 492 213 15 1 476 1 430 4.40e-86 271
MsG0280007786.01.T01 AT2G34830 41.720 465 188 16 1 437 1 410 8.75e-83 263
MsG0280007786.01.T01 AT2G34830 41.758 455 183 15 11 437 1 401 8.18e-81 257
MsG0280007786.01.T01 AT4G01250 48.603 179 61 4 231 401 109 264 1.11e-44 159
MsG0280007786.01.T01 AT5G52830 52.667 150 37 3 231 380 145 260 2.11e-40 149
MsG0280007786.01.T01 AT5G45050 40.927 259 108 9 209 450 1141 1371 6.74e-40 154
MsG0280007786.01.T01 AT5G45050 40.927 259 108 9 209 450 1113 1343 7.34e-40 154
MsG0280007786.01.T01 AT1G29280 60.526 114 39 2 219 331 32 140 8.50e-40 144
MsG0280007786.01.T01 AT5G45050 40.927 259 108 9 209 450 1002 1232 8.68e-40 154
MsG0280007786.01.T01 AT3G58710 68.478 92 28 1 231 321 40 131 4.73e-38 140
MsG0280007786.01.T01 AT3G58710 66.327 98 32 1 225 321 35 132 6.08e-38 140
MsG0280007786.01.T01 AT4G23550 56.911 123 43 2 235 356 124 237 1.22e-34 132
MsG0280007786.01.T01 AT2G30590 54.455 101 40 3 223 322 281 376 9.93e-29 117
MsG0280007786.01.T01 AT5G45260 57.009 107 33 2 231 335 1190 1285 2.04e-28 120
MsG0280007786.01.T01 AT2G23320 46.957 115 56 1 203 317 188 297 2.21e-27 112
MsG0280007786.01.T01 AT4G31550 55.172 87 34 1 231 317 221 302 4.75e-27 111
MsG0280007786.01.T01 AT4G24240 53.191 94 39 1 224 317 250 338 1.33e-26 110
MsG0280007786.01.T01 AT4G31550 55.172 87 34 1 231 317 222 303 1.60e-26 110
MsG0280007786.01.T01 AT2G24570 54.023 87 35 1 231 317 219 300 3.02e-25 106
MsG0280007786.01.T01 AT5G28650 52.874 87 36 2 231 317 238 319 1.07e-23 102
MsG0280007786.01.T01 AT3G04670 52.874 87 36 2 231 317 238 319 1.42e-23 101
MsG0280007786.01.T01 AT5G46350 54.054 74 31 2 261 332 184 256 4.66e-20 91.3
MsG0280007786.01.T01 AT1G29860 53.623 69 30 2 261 328 137 204 1.30e-18 86.3
MsG0280007786.01.T01 AT4G18170 57.377 61 25 1 261 321 173 232 2.24e-18 86.3
MsG0280007786.01.T01 AT1G68150 48.649 74 38 0 261 334 236 309 3.11e-18 86.7
MsG0280007786.01.T01 AT1G13960 45.000 100 42 4 231 320 219 315 5.56e-18 85.9
MsG0280007786.01.T01 AT1G13960 50.000 60 28 2 261 320 77 134 2.85e-11 65.5
MsG0280007786.01.T01 AT1G13960 45.000 100 42 4 231 320 372 468 8.03e-18 86.7
MsG0280007786.01.T01 AT1G13960 50.000 60 28 2 261 320 230 287 3.78e-11 65.9
MsG0280007786.01.T01 AT4G04450 48.684 76 39 0 260 335 198 273 1.37e-17 85.5
MsG0280007786.01.T01 AT5G49520 55.000 60 26 1 261 320 222 280 1.55e-17 84.7
MsG0280007786.01.T01 AT4G04450 48.684 76 39 0 260 335 292 367 1.58e-17 85.5
MsG0280007786.01.T01 AT1G62300 55.738 61 27 0 260 320 312 372 1.79e-17 85.5
MsG0280007786.01.T01 AT4G22070 55.738 61 27 0 260 320 297 357 3.04e-17 84.7
MsG0280007786.01.T01 AT4G22070 55.738 61 27 0 260 320 297 357 3.04e-17 84.7
MsG0280007786.01.T01 AT4G22070 55.738 61 27 0 260 320 297 357 3.04e-17 84.7
MsG0280007786.01.T01 AT4G22070 55.738 61 27 0 260 320 297 357 3.04e-17 84.7
MsG0280007786.01.T01 AT2G04880 54.545 66 29 1 258 323 281 345 3.88e-17 84.0
MsG0280007786.01.T01 AT2G04880 54.545 66 29 1 258 323 305 369 4.15e-17 84.3
MsG0280007786.01.T01 AT2G03340 47.778 90 42 3 261 349 416 501 6.07e-17 84.0
MsG0280007786.01.T01 AT2G03340 41.304 92 52 2 261 352 251 340 7.32e-13 70.9
MsG0280007786.01.T01 AT1G80840 48.485 66 34 0 257 322 143 208 8.01e-17 81.6
MsG0280007786.01.T01 AT3G62340 48.611 72 36 1 261 332 119 189 2.49e-16 79.7
MsG0280007786.01.T01 AT4G01720 39.000 100 60 1 221 320 201 299 3.43e-16 81.3
MsG0280007786.01.T01 AT5G26170 47.887 71 35 2 247 317 101 169 1.07e-15 75.5
MsG0280007786.01.T01 AT5G15130 47.143 70 37 0 261 330 228 297 1.28e-15 79.7
MsG0280007786.01.T01 AT5G15130 47.143 70 37 0 261 330 186 255 1.43e-15 79.3
MsG0280007786.01.T01 AT1G18860 53.333 60 28 0 261 320 240 299 1.79e-15 79.3
MsG0280007786.01.T01 AT2G21900 37.363 91 53 2 231 321 83 169 2.08e-15 75.5
MsG0280007786.01.T01 AT4G31800 47.945 73 35 1 261 333 112 181 3.46e-15 75.5
MsG0280007786.01.T01 AT1G69310 52.632 57 26 1 261 317 148 203 3.69e-15 76.3
MsG0280007786.01.T01 AT1G69310 52.632 57 26 1 261 317 148 203 3.69e-15 76.3
MsG0280007786.01.T01 AT1G69310 52.632 57 26 1 261 317 148 203 3.69e-15 76.3
MsG0280007786.01.T01 AT2G25000 51.667 60 29 0 261 320 104 163 5.95e-15 74.7
MsG0280007786.01.T01 AT2G25000 51.667 60 29 0 261 320 104 163 5.95e-15 74.7
MsG0280007786.01.T01 AT4G31800 47.945 73 35 1 261 333 177 246 6.10e-15 75.9
MsG0280007786.01.T01 AT2G25000 51.667 60 29 0 261 320 126 185 9.09e-15 74.3
MsG0280007786.01.T01 AT5G07100 46.053 76 36 2 261 332 142 216 1.06e-14 73.6
MsG0280007786.01.T01 AT5G07100 46.053 76 36 2 261 332 142 216 1.06e-14 73.6
MsG0280007786.01.T01 AT5G07100 46.053 76 36 2 261 332 142 216 1.06e-14 73.6
MsG0280007786.01.T01 AT5G07100 46.053 76 36 2 261 332 142 216 1.06e-14 73.6
MsG0280007786.01.T01 AT2G47260 51.667 60 28 1 261 320 175 233 1.39e-14 75.1
MsG0280007786.01.T01 AT2G25000 51.667 60 29 0 261 320 147 206 1.64e-14 73.9
MsG0280007786.01.T01 AT5G41570 40.000 90 48 2 229 318 72 155 2.06e-14 72.0
MsG0280007786.01.T01 AT5G07100 46.053 76 36 2 261 332 235 309 2.09e-14 74.3
MsG0280007786.01.T01 AT1G64000 50.820 61 29 1 258 318 112 171 2.49e-14 72.0
MsG0280007786.01.T01 AT1G69810 38.462 104 50 3 228 330 184 274 3.16e-14 74.7
MsG0280007786.01.T01 AT4G26640 46.154 65 34 1 261 325 206 269 4.22e-14 74.3
MsG0280007786.01.T01 AT4G26640 46.154 65 34 1 261 325 206 269 4.22e-14 74.3
MsG0280007786.01.T01 AT4G26640 46.154 65 34 1 261 325 206 269 4.22e-14 74.3
MsG0280007786.01.T01 AT4G26640 46.154 65 34 1 261 325 206 269 4.22e-14 74.3
MsG0280007786.01.T01 AT1G69810 38.462 104 50 3 228 330 126 216 5.43e-14 73.6
MsG0280007786.01.T01 AT4G26640 46.154 65 34 1 261 325 342 405 5.67e-14 74.7
MsG0280007786.01.T01 AT4G26640 46.154 65 34 1 261 325 382 445 6.08e-14 74.7
MsG0280007786.01.T01 AT4G26640 46.154 65 34 1 261 325 310 373 6.09e-14 74.3
MsG0280007786.01.T01 AT4G30935 47.761 67 32 2 261 325 332 397 8.08e-14 73.9
MsG0280007786.01.T01 AT3G01080 50.000 60 29 1 261 320 345 403 9.01e-14 73.6
MsG0280007786.01.T01 AT3G01080 47.059 68 34 2 261 328 206 271 3.29e-12 68.9
MsG0280007786.01.T01 AT3G01080 50.000 60 29 1 261 320 307 365 9.54e-14 73.6
MsG0280007786.01.T01 AT3G01080 47.059 68 34 2 261 328 168 233 3.43e-12 68.6
MsG0280007786.01.T01 AT2G37260 54.386 57 25 1 261 317 268 323 1.02e-13 72.8
MsG0280007786.01.T01 AT2G37260 28.426 197 119 5 254 431 77 270 4.74e-11 64.7
MsG0280007786.01.T01 AT2G37260 54.386 57 25 1 261 317 270 325 1.04e-13 72.8
MsG0280007786.01.T01 AT2G37260 28.426 197 119 5 254 431 79 272 5.30e-11 64.3
MsG0280007786.01.T01 AT5G56270 49.206 63 31 1 261 323 488 549 1.06e-13 73.9
MsG0280007786.01.T01 AT5G56270 47.059 68 32 3 261 326 274 339 1.50e-11 67.4
MsG0280007786.01.T01 AT2G37260 54.386 57 25 1 261 317 350 405 1.09e-13 73.2
MsG0280007786.01.T01 AT2G37260 28.426 197 119 5 254 431 159 352 5.22e-11 65.1
MsG0280007786.01.T01 AT5G13080 45.902 61 32 1 258 318 65 124 1.11e-13 68.9
MsG0280007786.01.T01 AT2G38470 44.444 72 39 1 261 332 363 433 1.25e-13 73.6
MsG0280007786.01.T01 AT4G39410 36.458 96 53 2 222 317 192 279 1.32e-13 72.0
MsG0280007786.01.T01 AT2G40750 33.099 142 84 4 231 366 122 258 4.36e-13 70.9
MsG0280007786.01.T01 AT2G44745 38.462 91 55 1 227 317 112 201 5.04e-13 68.6
MsG0280007786.01.T01 AT2G30250 50.820 61 29 1 261 321 329 388 6.21e-13 70.9
MsG0280007786.01.T01 AT4G26440 44.118 68 37 1 258 325 370 436 9.29e-13 70.9
MsG0280007786.01.T01 AT4G26440 46.667 75 36 3 261 333 179 251 1.41e-12 70.5
MsG0280007786.01.T01 AT3G01970 41.096 73 41 2 245 317 51 121 1.04e-12 66.2
MsG0280007786.01.T01 AT2G40740 40.909 88 45 3 231 315 147 230 1.29e-12 68.9
MsG0280007786.01.T01 AT2G46130 45.902 61 32 1 258 318 28 87 1.33e-12 64.7
MsG0280007786.01.T01 AT1G55600 46.774 62 32 1 259 320 306 366 1.44e-12 70.1
MsG0280007786.01.T01 AT5G43290 35.811 148 88 5 261 406 115 257 1.51e-12 68.2
MsG0280007786.01.T01 AT2G40740 40.909 88 45 3 231 315 156 239 1.58e-12 68.6
MsG0280007786.01.T01 AT5G24110 46.575 73 32 2 245 315 103 170 1.99e-12 68.6
MsG0280007786.01.T01 AT3G01080 47.059 68 34 2 261 328 206 271 2.30e-12 68.6
MsG0280007786.01.T01 AT3G56400 30.159 126 78 2 200 315 52 177 4.54e-12 67.0
MsG0280007786.01.T01 AT4G11070 49.123 57 27 1 261 315 110 166 5.86e-12 66.6
MsG0280007786.01.T01 AT4G11070 44.928 69 32 2 261 323 142 210 6.02e-12 67.0
MsG0280007786.01.T01 AT1G66550 33.684 95 61 1 223 315 66 160 7.64e-12 65.9
MsG0280007786.01.T01 AT5G64810 46.667 60 31 1 258 317 108 166 1.34e-11 63.9
MsG0280007786.01.T01 AT2G46400 39.583 96 46 4 225 315 73 161 1.36e-11 65.9
MsG0280007786.01.T01 AT1G66560 49.153 59 28 1 259 315 102 160 1.91e-11 64.7
MsG0280007786.01.T01 AT4G23810 48.276 58 28 1 261 316 159 216 3.70e-11 64.7
MsG0280007786.01.T01 AT1G66550 32.941 85 55 1 233 315 81 165 6.37e-11 63.2
MsG0280007786.01.T01 AT1G80590 32.540 126 78 2 261 384 86 206 9.92e-11 62.4

Find 81 sgRNAs with CRISPR-Local

Find 146 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTGAAGAAGATTCATAATT+AGG 0.177473 2:+20557998 None:intergenic
TGATTAAACAATAGGTTTAA+TGG 0.202593 2:+20555846 None:intergenic
ATAATTGATGTTGCTTCTTC+TGG 0.224592 2:-20558151 MsG0280007786.01.T01:CDS
ATAACAGCAGAAGGTTTAAT+TGG 0.226101 2:+20557953 None:intergenic
TTGTTCTCTTGTTCTTCTTT+TGG 0.236616 2:+20556056 None:intergenic
CTTTGTTTCTTCATCAAGTA+TGG 0.245608 2:-20558524 MsG0280007786.01.T01:CDS
CATCATAGCCTTCTCTTGTT+TGG 0.267430 2:+20555711 None:intergenic
GGATAAGGTGAACCTTTAAT+AGG 0.279412 2:+20556975 None:intergenic
CAAAACCTTGATTAAACAAT+AGG 0.283013 2:+20555838 None:intergenic
CAGTGATGGACTTTCTTATA+AGG 0.284819 2:-20555931 MsG0280007786.01.T01:CDS
CAATGTGAAGGAAGAGAATA+TGG 0.300905 2:-20555997 MsG0280007786.01.T01:CDS
CTATTGTTTAATCAAGGTTT+TGG 0.313071 2:-20555837 MsG0280007786.01.T01:CDS
TAATTAGGTAACTTTGGATT+AGG 0.313774 2:+20558013 None:intergenic
TTGTGGGCTTGGAGAAAATA+TGG 0.327482 2:-20557005 MsG0280007786.01.T01:CDS
TCCTTCACATTGTTAACAAC+TGG 0.339482 2:+20556008 None:intergenic
TATGGTCAGAAGCCTATTAA+AGG 0.340677 2:-20556987 MsG0280007786.01.T01:CDS
TCTCTTAAAGTTGAGAATAA+TGG 0.344831 2:+20558256 None:intergenic
TTCCTTCAGATTTGTGGGCT+TGG 0.351444 2:-20557016 MsG0280007786.01.T01:CDS
ATCCATTTCATCTCTTTGAT+TGG 0.356655 2:-20555773 MsG0280007786.01.T01:CDS
GCAGAAGGTTTAATTGGTCT+TGG 0.364059 2:+20557959 None:intergenic
TTTCATCTCTTTGATTGGTC+AGG 0.365054 2:-20555768 MsG0280007786.01.T01:CDS
GACCAATCAAAGAGATGAAA+TGG 0.366081 2:+20555771 None:intergenic
GAGTTCAGATCTCATCTTCC+AGG 0.376813 2:-20557880 MsG0280007786.01.T01:CDS
TCGTTTAAGACCTGTATTCC+TGG 0.388718 2:+20557862 None:intergenic
GATTCATAATTAGGTAACTT+TGG 0.391610 2:+20558007 None:intergenic
TAGGTTATAACCAACATGTT+TGG 0.405752 2:+20556212 None:intergenic
GTGGTAATTCAAGTAATGAT+AGG 0.407677 2:-20555815 MsG0280007786.01.T01:CDS
AAGTAGTTCCTTCAGATTTG+TGG 0.419426 2:-20557022 MsG0280007786.01.T01:CDS
GCTAAGGCATTTCTTTGTGT+TGG 0.434825 2:+20556164 None:intergenic
AGTAGTTCCTTCAGATTTGT+GGG 0.437348 2:-20557021 MsG0280007786.01.T01:CDS
TTAAACCTATTGTTTAATCA+AGG 0.440685 2:-20555843 MsG0280007786.01.T01:CDS
ATCTCATCTTCCAGGAATAC+AGG 0.440973 2:-20557872 MsG0280007786.01.T01:CDS
TGTCTACTATTTGCAGCTGC+TGG 0.441459 2:+20557053 None:intergenic
CTATTTGCAGCTGCTGGTGC+AGG 0.451080 2:+20557059 None:intergenic
GGAACAAACATGAACATGTT+TGG 0.451519 2:-20558283 MsG0280007786.01.T01:CDS
ATAATCAGAGGTGGTACTGC+TGG 0.461238 2:-20558475 MsG0280007786.01.T01:CDS
CTTAGCATTAATATTGATGT+TGG 0.461905 2:+20557925 None:intergenic
AAAGTAACTTACCTTGGATA+AGG 0.462105 2:+20556960 None:intergenic
GCTGCAAATAGTAGACAAAC+TGG 0.465679 2:-20557047 MsG0280007786.01.T01:CDS
TGGTTCTTCAAATGAGTTGT+TGG 0.473949 2:+20555731 None:intergenic
ATGAAATGGATCTAAAACCT+TGG 0.480200 2:+20555785 None:intergenic
AGTACTTGTGATGTTGAAGT+AGG 0.496007 2:+20558195 None:intergenic
GGTTTAATTGGTCTTGGAGA+AGG 0.498591 2:+20557965 None:intergenic
AGATCTTGTTGAACCTGCTA+AGG 0.507584 2:+20556148 None:intergenic
TATAGATGCAGCAGTTCAAA+GGG 0.512628 2:-20556275 MsG0280007786.01.T01:CDS
CTACAAATTGAGATGGATGA+AGG 0.513528 2:-20555960 MsG0280007786.01.T01:CDS
TTATAGATGCAGCAGTTCAA+AGG 0.515496 2:-20556276 MsG0280007786.01.T01:CDS
TTGGTTGAAATAACAGCAGA+AGG 0.519861 2:+20557944 None:intergenic
TCTGTTCTTGAAGACAATAG+AGG 0.525437 2:-20558307 MsG0280007786.01.T01:CDS
CAACATCAATATTAATGCTA+AGG 0.530488 2:-20557924 MsG0280007786.01.T01:CDS
ACACAAAGAAATGCCTTAGC+AGG 0.532059 2:-20556161 MsG0280007786.01.T01:CDS
GAACAGAAGAGAAACTCAAA+GGG 0.532880 2:+20558323 None:intergenic
TGGACTTTCTTATAAGGTGA+TGG 0.535954 2:-20555925 MsG0280007786.01.T01:CDS
GAAGCAACATCAATTATAGC+AGG 0.537336 2:+20558157 None:intergenic
GCATTTCTTTGTGTTGGCCA+TGG 0.541996 2:+20556170 None:intergenic
CTCCAAGCCCACAAATCTGA+AGG 0.549243 2:+20557014 None:intergenic
GCTGGAGCATATACTAGTAC+AGG 0.551951 2:-20558457 MsG0280007786.01.T01:CDS
GAGAACAATAATAACAGTGA+TGG 0.557395 2:-20556041 MsG0280007786.01.T01:CDS
TCCAGTTGTTAACAATGTGA+AGG 0.558008 2:-20556009 MsG0280007786.01.T01:CDS
TTAAAGGTTCACCTTATCCA+AGG 0.571044 2:-20556971 MsG0280007786.01.T01:intron
TTGAAGAACCAAACAAGAGA+AGG 0.573435 2:-20555719 MsG0280007786.01.T01:CDS
TGGTAATTCAAGTAATGATA+GGG 0.573489 2:-20555814 MsG0280007786.01.T01:CDS
AGAACAGAAGAGAAACTCAA+AGG 0.577454 2:+20558322 None:intergenic
AGAGAAGCTACAAATTGAGA+TGG 0.578599 2:-20555967 MsG0280007786.01.T01:CDS
CAGAACTGATCCAAACATGT+TGG 0.596203 2:-20556222 MsG0280007786.01.T01:CDS
ATGATTGTGTTCTGAAGTGT+AGG 0.601847 2:+20556193 None:intergenic
GGAATACAGGTCTTAAACGA+AGG 0.603168 2:-20557859 MsG0280007786.01.T01:intron
ATCATGATCATGATAATCAG+TGG 0.603815 2:-20558393 MsG0280007786.01.T01:CDS
GGAAAATAGCAAAATTCATG+AGG 0.604467 2:-20555904 MsG0280007786.01.T01:CDS
GTTCAAAGGGATGTTCAGCT+AGG 0.605745 2:-20556262 MsG0280007786.01.T01:CDS
TGATGATGATGTGAAACTGC+AGG 0.613240 2:+20558412 None:intergenic
GATGAAGGAGAATTCAGTGA+TGG 0.613782 2:-20555945 MsG0280007786.01.T01:CDS
TAATGATAGGGATCAATCCA+AGG 0.614402 2:-20555802 MsG0280007786.01.T01:CDS
ATGTTGAAGTAGGAAGAAGA+AGG 0.618243 2:+20558205 None:intergenic
CTTCAGAACACAATCATCCA+TGG 0.626675 2:-20556187 MsG0280007786.01.T01:CDS
TCAAGTATGGACAATTACCT+AGG 0.636819 2:-20558511 MsG0280007786.01.T01:CDS
GTTCTTGAAGACAATAGAGG+AGG 0.649107 2:-20558304 MsG0280007786.01.T01:CDS
GATTTAACTGACATAATCAG+AGG 0.660960 2:-20558487 MsG0280007786.01.T01:CDS
GATTCTCTTCTAGACAACAC+AGG 0.690701 2:-20557902 MsG0280007786.01.T01:CDS
TTAACTGACATAATCAGAGG+TGG 0.698541 2:-20558484 MsG0280007786.01.T01:CDS
TTATGTCAGTTAAATCACCT+AGG 0.732430 2:+20558494 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAAAAAAACTATTAGATT+AGG + Chr2:20556997-20557016 None:intergenic 10.0%
!!! TGTTTCTTATTATTATTTTT+TGG - Chr2:20557933-20557952 MsG0280007786.01.T01:CDS 10.0%
!! TGAAATTAATTATAGTAACA+TGG + Chr2:20556510-20556529 None:intergenic 15.0%
!! TGATTTATTCCAATTAAAAT+AGG + Chr2:20556960-20556979 None:intergenic 15.0%
!!! ATTTTGAAGTAGAAATTTTA+TGG - Chr2:20556578-20556597 MsG0280007786.01.T01:intron 15.0%
!!! GTTTTTTTTATTTCCTTTTT+TGG - Chr2:20557006-20557025 MsG0280007786.01.T01:CDS 15.0%
!! AAAAAAACATGTACCAAAAA+AGG + Chr2:20557022-20557041 None:intergenic 20.0%
!! AAGGAAATGATTATAGTTAT+AGG + Chr2:20557399-20557418 None:intergenic 20.0%
!! AATATTGTTACGAAACTTAA+AGG + Chr2:20557818-20557837 None:intergenic 20.0%
!! GTTTAATTAAGAAGCTTATT+AGG - Chr2:20557567-20557586 MsG0280007786.01.T01:intron 20.0%
!! TAGCAATTAAAAATACATTG+AGG - Chr2:20557328-20557347 MsG0280007786.01.T01:intron 20.0%
!! TCTAAAAATTAAAAGGACTA+TGG + Chr2:20556920-20556939 None:intergenic 20.0%
!! TGATTAAACAATAGGTTTAA+TGG + Chr2:20558405-20558424 None:intergenic 20.0%
!! TTAAACCTATTGTTTAATCA+AGG - Chr2:20558405-20558424 MsG0280007786.01.T01:CDS 20.0%
!! TTACAAGTAACAATATACAA+TGG + Chr2:20557461-20557480 None:intergenic 20.0%
!! TTATTCCAATTAAAATAGGT+AGG + Chr2:20556956-20556975 None:intergenic 20.0%
!!! ATTATTTTTTGGTTGCTATT+AGG - Chr2:20557944-20557963 MsG0280007786.01.T01:CDS 20.0%
!!! TGTATTAAGCAATTTTGATT+TGG - Chr2:20557729-20557748 MsG0280007786.01.T01:intron 20.0%
!!! TTATTTTTTGGTTGCTATTA+GGG - Chr2:20557945-20557964 MsG0280007786.01.T01:CDS 20.0%
!!! TTGATTTGGTATATAATGTT+AGG - Chr2:20557743-20557762 MsG0280007786.01.T01:intron 20.0%
!!! TTGGTAGTCTAAAAATTAAA+AGG + Chr2:20556927-20556946 None:intergenic 20.0%
!!! TTTAAGATAAGTTTCTTGAA+AGG + Chr2:20556836-20556855 None:intergenic 20.0%
!!! TTTGAGAATATGTTTTTACA+TGG + Chr2:20556199-20556218 None:intergenic 20.0%
! AAAACAATGTCAAAACCTAA+CGG + Chr2:20557842-20557861 None:intergenic 25.0%
! AGATAACAAAAACAACAACA+AGG - Chr2:20557488-20557507 MsG0280007786.01.T01:intron 25.0%
! CAAAACCTTGATTAAACAAT+AGG + Chr2:20558413-20558432 None:intergenic 25.0%
! CAACATCAATATTAATGCTA+AGG - Chr2:20556324-20556343 MsG0280007786.01.T01:intron 25.0%
! CTTAGCATTAATATTGATGT+TGG + Chr2:20556326-20556345 None:intergenic 25.0%
! GATTCATAATTAGGTAACTT+TGG + Chr2:20556244-20556263 None:intergenic 25.0%
! GTTGAAGAAGATTCATAATT+AGG + Chr2:20556253-20556272 None:intergenic 25.0%
! TAATTAGGTAACTTTGGATT+AGG + Chr2:20556238-20556257 None:intergenic 25.0%
! TCTCTTAAAGTTGAGAATAA+TGG + Chr2:20555995-20556014 None:intergenic 25.0%
! TGATCAAGTTCTTGTAAAAA+TGG + Chr2:20556019-20556038 None:intergenic 25.0%
! TGGTAATTCAAGTAATGATA+GGG - Chr2:20558434-20558453 MsG0280007786.01.T01:CDS 25.0%
! TTAGAGAGAGATTTCTTAAT+TGG + Chr2:20557524-20557543 None:intergenic 25.0%
! TTGTGTAATGAATTAATTGC+AGG - Chr2:20557136-20557155 MsG0280007786.01.T01:intron 25.0%
!! CTATTGTTTAATCAAGGTTT+TGG - Chr2:20558411-20558430 MsG0280007786.01.T01:CDS 25.0%
!! TAAAATAGGTAGGTATGTTT+TGG + Chr2:20556946-20556965 None:intergenic 25.0%
!!! ACATACCTACCTATTTTAAT+TGG - Chr2:20556948-20556967 MsG0280007786.01.T01:intron 25.0%
!!! CTTTGTAGAAGTATTGTTTT+TGG + Chr2:20558133-20558152 None:intergenic 25.0%
!!! CTTTTCATATTCATTGATTG+AGG - Chr2:20557620-20557639 MsG0280007786.01.T01:intron 25.0%
!!! GTTTTGACATTGTTTTAGAT+TGG - Chr2:20557846-20557865 MsG0280007786.01.T01:intron 25.0%
!!! TATTTTTTGGTTGCTATTAG+GGG - Chr2:20557946-20557965 MsG0280007786.01.T01:CDS 25.0%
AAACACAGTAGTACATTACA+AGG + Chr2:20557418-20557437 None:intergenic 30.0%
AAAGTAACTTACCTTGGATA+AGG + Chr2:20557291-20557310 None:intergenic 30.0%
AAGTATTTGATTGGTGGAAA+TGG - Chr2:20557093-20557112 MsG0280007786.01.T01:CDS 30.0%
AATACCTAAACGAGACTTAA+AGG + Chr2:20557873-20557892 None:intergenic 30.0%
ATAACAGCAGAAGGTTTAAT+TGG + Chr2:20556298-20556317 None:intergenic 30.0%
ATCATGATCATGATAATCAG+TGG - Chr2:20555855-20555874 MsG0280007786.01.T01:CDS 30.0%
ATCCATTTCATCTCTTTGAT+TGG - Chr2:20558475-20558494 MsG0280007786.01.T01:CDS 30.0%
GAGAACAATAATAACAGTGA+TGG - Chr2:20558207-20558226 MsG0280007786.01.T01:CDS 30.0%
GATTTAACTGACATAATCAG+AGG - Chr2:20555761-20555780 MsG0280007786.01.T01:CDS 30.0%
GGAAAATAGCAAAATTCATG+AGG - Chr2:20558344-20558363 MsG0280007786.01.T01:CDS 30.0%
GTGGTAATTCAAGTAATGAT+AGG - Chr2:20558433-20558452 MsG0280007786.01.T01:CDS 30.0%
GTTATCAAGACTATAACATG+TGG - Chr2:20556713-20556732 MsG0280007786.01.T01:intron 30.0%
TAAAGGACTAATCTGATACA+GGG + Chr2:20557801-20557820 None:intergenic 30.0%
TAGGTTATAACCAACATGTT+TGG + Chr2:20558039-20558058 None:intergenic 30.0%
TCTAAGAAAGTAACTTACCT+TGG + Chr2:20557297-20557316 None:intergenic 30.0%
TTAAAGGACTAATCTGATAC+AGG + Chr2:20557802-20557821 None:intergenic 30.0%
TTATGTCAGTTAAATCACCT+AGG + Chr2:20555757-20555776 None:intergenic 30.0%
TTCGTAACAATATTTCCGTT+AGG - Chr2:20557824-20557843 MsG0280007786.01.T01:intron 30.0%
! ATAATTGATGTTGCTTCTTC+TGG - Chr2:20556097-20556116 MsG0280007786.01.T01:CDS 30.0%
! ATGAAATGGATCTAAAACCT+TGG + Chr2:20558466-20558485 None:intergenic 30.0%
! CATGTGGTTTAATTTCTTTG+AGG - Chr2:20556729-20556748 MsG0280007786.01.T01:intron 30.0%
! CTTTGTTTCTTCATCAAGTA+TGG - Chr2:20555724-20555743 MsG0280007786.01.T01:CDS 30.0%
! TCAAAGGAATAGGAATTTTC+AGG + Chr2:20556880-20556899 None:intergenic 30.0%
! TGAAGAGTGAAGTATTTGAT+TGG - Chr2:20557084-20557103 MsG0280007786.01.T01:CDS 30.0%
! TTGTTCTCTTGTTCTTCTTT+TGG + Chr2:20558195-20558214 None:intergenic 30.0%
! TTTGAAGTACTATTGAGAGA+AGG - Chr2:20556607-20556626 MsG0280007786.01.T01:intron 30.0%
! TTTTTGTGCATGATGATCAA+AGG + Chr2:20556896-20556915 None:intergenic 30.0%
!! TTGTTTAATCAAGGTTTTGG+TGG - Chr2:20558414-20558433 MsG0280007786.01.T01:CDS 30.0%
!!! GTAGAAGTATTGTTTTTGGA+TGG + Chr2:20558129-20558148 None:intergenic 30.0%
!!! TAGGAATTTTCAGGTAGTTA+TGG + Chr2:20556871-20556890 None:intergenic 30.0%
AAGTACTATTGAGAGAAGGT+AGG - Chr2:20556611-20556630 MsG0280007786.01.T01:intron 35.0%
AAGTAGTTCCTTCAGATTTG+TGG - Chr2:20557226-20557245 MsG0280007786.01.T01:intron 35.0%
AGAACAGAAGAGAAACTCAA+AGG + Chr2:20555929-20555948 None:intergenic 35.0%
AGAGAAGCTACAAATTGAGA+TGG - Chr2:20558281-20558300 MsG0280007786.01.T01:CDS 35.0%
AGTACTATTGAGAGAAGGTA+GGG - Chr2:20556612-20556631 MsG0280007786.01.T01:intron 35.0%
AGTACTTGTGATGTTGAAGT+AGG + Chr2:20556056-20556075 None:intergenic 35.0%
AGTAGTTCCTTCAGATTTGT+GGG - Chr2:20557227-20557246 MsG0280007786.01.T01:intron 35.0%
ATGTTGAAGTAGGAAGAAGA+AGG + Chr2:20556046-20556065 None:intergenic 35.0%
CAAAAACAACAACAAGGCTT+AGG - Chr2:20557494-20557513 MsG0280007786.01.T01:intron 35.0%
CAATGGTCAAGCTAAAAATG+TGG + Chr2:20557444-20557463 None:intergenic 35.0%
CAATGTGAAGGAAGAGAATA+TGG - Chr2:20558251-20558270 MsG0280007786.01.T01:CDS 35.0%
CAGGAAGAATCAAGCAAAAA+AGG - Chr2:20557155-20557174 MsG0280007786.01.T01:intron 35.0%
CTACAAATTGAGATGGATGA+AGG - Chr2:20558288-20558307 MsG0280007786.01.T01:CDS 35.0%
GAACAGAAGAGAAACTCAAA+GGG + Chr2:20555928-20555947 None:intergenic 35.0%
GAAGAATCAAGCAAAAAAGG+TGG - Chr2:20557158-20557177 MsG0280007786.01.T01:intron 35.0%
GAAGCAACATCAATTATAGC+AGG + Chr2:20556094-20556113 None:intergenic 35.0%
GACCAATCAAAGAGATGAAA+TGG + Chr2:20558480-20558499 None:intergenic 35.0%
GGAACAAACATGAACATGTT+TGG - Chr2:20555965-20555984 MsG0280007786.01.T01:CDS 35.0%
GGATAAGGTGAACCTTTAAT+AGG + Chr2:20557276-20557295 None:intergenic 35.0%
TAATGATAGGGATCAATCCA+AGG - Chr2:20558446-20558465 MsG0280007786.01.T01:CDS 35.0%
TATAGATGCAGCAGTTCAAA+GGG - Chr2:20557973-20557992 MsG0280007786.01.T01:CDS 35.0%
TATGGTCAGAAGCCTATTAA+AGG - Chr2:20557261-20557280 MsG0280007786.01.T01:intron 35.0%
TCAAGTATGGACAATTACCT+AGG - Chr2:20555737-20555756 MsG0280007786.01.T01:CDS 35.0%
TCCAGTTGTTAACAATGTGA+AGG - Chr2:20558239-20558258 MsG0280007786.01.T01:CDS 35.0%
TCCTTCACATTGTTAACAAC+TGG + Chr2:20558243-20558262 None:intergenic 35.0%
TCTGTTCTTGAAGACAATAG+AGG - Chr2:20555941-20555960 MsG0280007786.01.T01:CDS 35.0%
TGCATGATGATCAAAGGAAT+AGG + Chr2:20556890-20556909 None:intergenic 35.0%
TGGACTTTCTTATAAGGTGA+TGG - Chr2:20558323-20558342 MsG0280007786.01.T01:CDS 35.0%
TGGTTCTTCAAATGAGTTGT+TGG + Chr2:20558520-20558539 None:intergenic 35.0%
TTAAAGGTTCACCTTATCCA+AGG - Chr2:20557277-20557296 MsG0280007786.01.T01:intron 35.0%
TTAACTGACATAATCAGAGG+TGG - Chr2:20555764-20555783 MsG0280007786.01.T01:CDS 35.0%
TTATAGATGCAGCAGTTCAA+AGG - Chr2:20557972-20557991 MsG0280007786.01.T01:CDS 35.0%
TTGAAGAACCAAACAAGAGA+AGG - Chr2:20558529-20558548 MsG0280007786.01.T01:CDS 35.0%
TTGGTTGAAATAACAGCAGA+AGG + Chr2:20556307-20556326 None:intergenic 35.0%
! AGAGTGAAGTATTTGATTGG+TGG - Chr2:20557087-20557106 MsG0280007786.01.T01:CDS 35.0%
! TTTCATCTCTTTGATTGGTC+AGG - Chr2:20558480-20558499 MsG0280007786.01.T01:CDS 35.0%
!! AGAAGCTAACTCTACTTTTC+AGG + Chr2:20556776-20556795 None:intergenic 35.0%
!! ATGATTGTGTTCTGAAGTGT+AGG + Chr2:20558058-20558077 None:intergenic 35.0%
!! CAGTGATGGACTTTCTTATA+AGG - Chr2:20558317-20558336 MsG0280007786.01.T01:CDS 35.0%
!!! GAGGACTTTTTTGCTGAATT+GGG - Chr2:20558363-20558382 MsG0280007786.01.T01:CDS 35.0%
!!! TGAGGACTTTTTTGCTGAAT+TGG - Chr2:20558362-20558381 MsG0280007786.01.T01:CDS 35.0%
ACACAAAGAAATGCCTTAGC+AGG - Chr2:20558087-20558106 MsG0280007786.01.T01:CDS 40.0%
ACTACACGTGGCACTATTAA+TGG - Chr2:20556673-20556692 MsG0280007786.01.T01:intron 40.0%
AGATCTTGTTGAACCTGCTA+AGG + Chr2:20558103-20558122 None:intergenic 40.0%
ATCTCATCTTCCAGGAATAC+AGG - Chr2:20556376-20556395 MsG0280007786.01.T01:intron 40.0%
CAGAACTGATCCAAACATGT+TGG - Chr2:20558026-20558045 MsG0280007786.01.T01:CDS 40.0%
CTTCAGAACACAATCATCCA+TGG - Chr2:20558061-20558080 MsG0280007786.01.T01:CDS 40.0%
GATACAGGGTCGAAACTTAA+AGG + Chr2:20557787-20557806 None:intergenic 40.0%
GATGAAGGAGAATTCAGTGA+TGG - Chr2:20558303-20558322 MsG0280007786.01.T01:CDS 40.0%
GATTCTCTTCTAGACAACAC+AGG - Chr2:20556346-20556365 MsG0280007786.01.T01:intron 40.0%
GCTGCAAATAGTAGACAAAC+TGG - Chr2:20557201-20557220 MsG0280007786.01.T01:intron 40.0%
GGAATACAGGTCTTAAACGA+AGG - Chr2:20556389-20556408 MsG0280007786.01.T01:intron 40.0%
GTTCTTGAAGACAATAGAGG+AGG - Chr2:20555944-20555963 MsG0280007786.01.T01:CDS 40.0%
TATTGAGAGAAGGTAGGGTT+TGG - Chr2:20556617-20556636 MsG0280007786.01.T01:intron 40.0%
TGGTCCTTTAAGTCTCGTTT+AGG - Chr2:20557866-20557885 MsG0280007786.01.T01:CDS 40.0%
TTGTGGGCTTGGAGAAAATA+TGG - Chr2:20557243-20557262 MsG0280007786.01.T01:intron 40.0%
! CTTTTTCTTGTGACTACACG+TGG - Chr2:20556661-20556680 MsG0280007786.01.T01:intron 40.0%
! GCAGAAGGTTTAATTGGTCT+TGG + Chr2:20556292-20556311 None:intergenic 40.0%
! GCTAAGGCATTTCTTTGTGT+TGG + Chr2:20558087-20558106 None:intergenic 40.0%
! TCGTTTAAGACCTGTATTCC+TGG + Chr2:20556389-20556408 None:intergenic 40.0%
! TGATGATGATGTGAAACTGC+AGG + Chr2:20555839-20555858 None:intergenic 40.0%
!! GGTTTAATTGGTCTTGGAGA+AGG + Chr2:20556286-20556305 None:intergenic 40.0%
!!! GGCTTTGTTGTGTCATTTTG+TGG + Chr2:20558174-20558193 None:intergenic 40.0%
ATAATCAGAGGTGGTACTGC+TGG - Chr2:20555773-20555792 MsG0280007786.01.T01:CDS 45.0%
GAGTTCAGATCTCATCTTCC+AGG - Chr2:20556368-20556387 MsG0280007786.01.T01:intron 45.0%
GCTGGAGCATATACTAGTAC+AGG - Chr2:20555791-20555810 MsG0280007786.01.T01:CDS 45.0%
GGTAGGGTTTGGCATAAGTT+AGG - Chr2:20556628-20556647 MsG0280007786.01.T01:intron 45.0%
GTTCAAAGGGATGTTCAGCT+AGG - Chr2:20557986-20558005 MsG0280007786.01.T01:CDS 45.0%
TGTCTACTATTTGCAGCTGC+TGG + Chr2:20557198-20557217 None:intergenic 45.0%
TTCCTTCAGATTTGTGGGCT+TGG - Chr2:20557232-20557251 MsG0280007786.01.T01:intron 45.0%
! GCATTTCTTTGTGTTGGCCA+TGG + Chr2:20558081-20558100 None:intergenic 45.0%
CTCCAAGCCCACAAATCTGA+AGG + Chr2:20557237-20557256 None:intergenic 50.0%
CTATTTGCAGCTGCTGGTGC+AGG + Chr2:20557192-20557211 None:intergenic 55.0%
Chromosome Type Strat End Strand Name
Chr2 gene 20555713 20558557 20555713 ID=MsG0280007786.01;Name=MsG0280007786.01
Chr2 mRNA 20555713 20558557 20555713 ID=MsG0280007786.01.T01;Parent=MsG0280007786.01;Name=MsG0280007786.01.T01;_AED=0.48;_eAED=0.48;_QI=0|0|0|1|1|1|3|0|476
Chr2 exon 20557860 20558557 20557860 ID=MsG0280007786.01.T01:exon:10486;Parent=MsG0280007786.01.T01
Chr2 exon 20556972 20557112 20556972 ID=MsG0280007786.01.T01:exon:10485;Parent=MsG0280007786.01.T01
Chr2 exon 20555713 20556304 20555713 ID=MsG0280007786.01.T01:exon:10484;Parent=MsG0280007786.01.T01
Chr2 CDS 20557860 20558557 20557860 ID=MsG0280007786.01.T01:cds;Parent=MsG0280007786.01.T01
Chr2 CDS 20556972 20557112 20556972 ID=MsG0280007786.01.T01:cds;Parent=MsG0280007786.01.T01
Chr2 CDS 20555713 20556304 20555713 ID=MsG0280007786.01.T01:cds;Parent=MsG0280007786.01.T01
Gene Sequence

>MsG0280007786.01.T01

ATGTGTAGTATCTTTGTTTCTTCATCAAGTATGGACAATTACCTAGGTGATTTAACTGACATAATCAGAGGTGGTACTGCTGGAGCATATACTAGTACAGGAACTTCATCATCATCTGCTGAACCTGCAGTTTCACATCATCATCATGATCATGATAATCAGTGGAATCATCATCATCATAATCATCAATTCTCTTCTGATCATCATCATCACCCTTTGAGTTTCTCTTCTGTTCTTGAAGACAATAGAGGAGGAACAAACATGAACATGTTTGGTGATCCATTATTCTCAACTTTAAGAGATCCATTTTTACAAGAACTTGATCATATACCTTCTTCTTCCTACTTCAACATCACAAGTACTACTAGTACTACTTCACCTGCTATAATTGATGTTGCTTCTTCTGGTGTTAGTGTTACTACTTCATCATCTTCTTCTGCTTCTGTTTTTGCACTTGATCATGAGATGAGATCAATATCAAGACCATGTAAAAACATATTCTCAAATATGATTCAGATCTCTCCTAATCCAAAGTTACCTAATTATGAATCTTCTTCAACAATAGCAGCACCTTCTCCAAGACCAATTAAACCTTCTGCTGTTATTTCAACCAACATCAATATTAATGCTAAGGATTCTCTTCTAGACAACACAGGAGTTCAGATCTCATCTTCCAGGAATACAGGTCTTAAACGAAGGAAGAATCAAGCAAAAAAGGTGGTTTGTATTCCTGCACCAGCAGCTGCAAATAGTAGACAAACTGGAGAAGTAGTTCCTTCAGATTTGTGGGCTTGGAGAAAATATGGTCAGAAGCCTATTAAAGGTTCACCTTATCCAAGGGGTTATTATAGATGCAGCAGTTCAAAGGGATGTTCAGCTAGGAAACAAGTTGAGAGAAGCAGAACTGATCCAAACATGTTGGTTATAACCTACACTTCAGAACACAATCATCCATGGCCAACACAAAGAAATGCCTTAGCAGGTTCAACAAGATCTCAACCATCCAAAAACAATACTTCTACAAAGAATTCAGAAACATCACAGCCACAAAATGACACAACAAAGCCAAAAGAAGAACAAGAGAACAATAATAACAGTGATGGAAATGATTCTCCAGTTGTTAACAATGTGAAGGAAGAGAATATGGAAGATATAGAGAAGCTACAAATTGAGATGGATGAAGGAGAATTCAGTGATGGACTTTCTTATAAGGTGATGGAAAATAGCAAAATTCATGAGGACTTTTTTGCTGAATTGGGTGAAATTGAAACTGATCCATTAAACCTATTGTTTAATCAAGGTTTTGGTGGTAATTCAAGTAATGATAGGGATCAATCCAAGGTTTTAGATCCATTTCATCTCTTTGATTGGTCAGGTGATAACAACAATACCAACAACTCATTTGAAGAACCAAACAAGAGAAGGCTATGA

Protein sequence

>MsG0280007786.01.T01

MCSIFVSSSSMDNYLGDLTDIIRGGTAGAYTSTGTSSSSAEPAVSHHHHDHDNQWNHHHHNHQFSSDHHHHPLSFSSVLEDNRGGTNMNMFGDPLFSTLRDPFLQELDHIPSSSYFNITSTTSTTSPAIIDVASSGVSVTTSSSSSASVFALDHEMRSISRPCKNIFSNMIQISPNPKLPNYESSSTIAAPSPRPIKPSAVISTNININAKDSLLDNTGVQISSSRNTGLKRRKNQAKKVVCIPAPAAANSRQTGEVVPSDLWAWRKYGQKPIKGSPYPRGYYRCSSSKGCSARKQVERSRTDPNMLVITYTSEHNHPWPTQRNALAGSTRSQPSKNNTSTKNSETSQPQNDTTKPKEEQENNNNSDGNDSPVVNNVKEENMEDIEKLQIEMDEGEFSDGLSYKVMENSKIHEDFFAELGEIETDPLNLLFNQGFGGNSSNDRDQSKVLDPFHLFDWSGDNNNTNNSFEEPNKRRL*