AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480022106.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480022106.01.T01 MTR_4g080797 92.053 302 1 1 2 280 3 304 0.0 541
MsG0480022106.01.T01 MTR_4g080797 92.053 302 1 1 2 280 79 380 0.0 541
MsG0480022106.01.T01 MTR_4g080797 99.342 152 1 0 129 280 1 152 7.97e-100 302
MsG0480022106.01.T01 MTR_4g088495 92.053 302 1 1 2 280 79 380 0.0 541
MsG0480022106.01.T01 MTR_4g088495 92.053 302 1 1 2 280 155 456 0.0 541
MsG0480022106.01.T01 MTR_4g088495 92.053 302 1 1 2 280 231 532 0.0 541
MsG0480022106.01.T01 MTR_4g088495 92.053 302 1 1 2 280 307 608 0.0 541
MsG0480022106.01.T01 MTR_4g088495 92.053 302 1 1 2 280 383 684 0.0 541
MsG0480022106.01.T01 MTR_4g088495 92.053 302 1 1 2 280 459 760 0.0 541
MsG0480022106.01.T01 MTR_4g088495 92.053 302 1 1 2 280 535 836 0.0 541
MsG0480022106.01.T01 MTR_4g088495 91.722 302 2 1 2 280 3 304 0.0 538
MsG0480022106.01.T01 MTR_4g088495 98.684 152 2 0 129 280 1 152 1.64e-93 299
MsG0480022106.01.T01 MTR_4g081010 92.053 302 1 1 2 280 3 304 0.0 541
MsG0480022106.01.T01 MTR_4g081010 99.342 152 1 0 129 280 1 152 6.42e-101 302
MsG0480022106.01.T01 MTR_4g081010 92.053 302 1 1 2 280 3 304 0.0 541
MsG0480022106.01.T01 MTR_4g081010 92.053 302 1 1 2 280 79 380 0.0 541
MsG0480022106.01.T01 MTR_4g081010 99.342 152 1 0 129 280 1 152 7.80e-100 302
MsG0480022106.01.T01 MTR_8g081020 92.053 302 1 1 2 280 3 304 0.0 541
MsG0480022106.01.T01 MTR_8g081020 92.053 302 1 1 2 280 79 380 0.0 541
MsG0480022106.01.T01 MTR_8g081020 99.342 152 1 0 129 280 1 152 8.32e-100 302
MsG0480022106.01.T01 MTR_8g018230 92.053 302 1 1 2 280 3 304 0.0 541
MsG0480022106.01.T01 MTR_8g018230 92.053 302 1 1 2 280 79 380 0.0 541
MsG0480022106.01.T01 MTR_8g018230 99.342 152 1 0 129 280 1 152 7.97e-100 302
MsG0480022106.01.T01 MTR_4g091580 92.053 302 1 1 2 280 3 304 0.0 541
MsG0480022106.01.T01 MTR_4g091580 91.391 302 3 1 2 280 79 380 0.0 536
MsG0480022106.01.T01 MTR_4g091580 91.391 302 3 1 2 280 155 456 0.0 536
MsG0480022106.01.T01 MTR_4g091580 91.391 302 3 1 2 280 231 532 0.0 536
MsG0480022106.01.T01 MTR_4g091580 99.342 152 1 0 129 280 1 152 7.82e-98 302
MsG0480022106.01.T01 MTR_4g081010 92.053 302 1 1 2 280 3 304 0.0 541
MsG0480022106.01.T01 MTR_4g081010 92.053 302 1 1 2 280 79 380 0.0 541
MsG0480022106.01.T01 MTR_4g081010 92.053 302 1 1 2 280 155 456 0.0 541
MsG0480022106.01.T01 MTR_4g081010 92.053 302 1 1 2 280 231 532 0.0 541
MsG0480022106.01.T01 MTR_4g081010 99.342 152 1 0 129 280 1 152 7.90e-98 302
MsG0480022106.01.T01 MTR_8g018230 92.053 302 1 1 2 280 3 304 0.0 541
MsG0480022106.01.T01 MTR_8g018230 92.053 302 1 1 2 280 79 380 0.0 541
MsG0480022106.01.T01 MTR_8g018230 92.053 302 1 1 2 280 155 456 0.0 541
MsG0480022106.01.T01 MTR_8g018230 92.053 302 1 1 2 280 231 532 0.0 541
MsG0480022106.01.T01 MTR_8g018230 99.342 152 1 0 129 280 1 152 8.07e-98 302
MsG0480022106.01.T01 MTR_8g018230 92.053 302 1 1 2 280 3 304 0.0 541
MsG0480022106.01.T01 MTR_8g018230 92.053 302 1 1 2 280 79 380 0.0 541
MsG0480022106.01.T01 MTR_8g018230 92.053 302 1 1 2 280 155 456 0.0 541
MsG0480022106.01.T01 MTR_8g018230 99.342 152 1 0 129 280 1 152 8.82e-99 302
MsG0480022106.01.T01 MTR_8g018230 92.053 302 1 1 2 280 3 304 0.0 541
MsG0480022106.01.T01 MTR_8g018230 92.053 302 1 1 2 280 79 380 0.0 541
MsG0480022106.01.T01 MTR_8g018230 92.053 302 1 1 2 280 155 456 0.0 541
MsG0480022106.01.T01 MTR_8g018230 99.342 152 1 0 129 280 1 152 8.82e-99 302
MsG0480022106.01.T01 MTR_4g091580 91.722 302 2 1 2 280 3 304 0.0 540
MsG0480022106.01.T01 MTR_4g091580 91.722 302 2 1 2 280 79 380 0.0 540
MsG0480022106.01.T01 MTR_4g091580 99.342 152 1 0 129 280 1 152 8.78e-100 302
MsG0480022106.01.T01 MTR_6g061930 86.424 302 3 2 2 280 3 289 2.53e-178 498
MsG0480022106.01.T01 MTR_6g061930 99.342 152 1 0 129 280 1 152 7.09e-101 301
MsG0480022106.01.T01 MTR_8g018230 80.464 302 1 2 2 280 3 269 3.17e-161 454
MsG0480022106.01.T01 MTR_8g018230 99.342 152 1 0 129 280 1 152 1.95e-101 302
MsG0480022106.01.T01 MTR_7g116360 80.645 279 1 1 2 280 3 228 1.29e-149 423
MsG0480022106.01.T01 MTR_7g116360 99.342 152 1 0 129 280 1 152 6.14e-102 302
MsG0480022106.01.T01 MTR_1g066390 80.645 279 1 1 2 280 3 228 2.57e-149 422
MsG0480022106.01.T01 MTR_1g066390 99.342 152 1 0 129 280 1 152 9.86e-102 301
MsG0480022106.01.T01 MTR_7g116360 80.645 279 1 1 2 280 51 276 4.77e-149 423
MsG0480022106.01.T01 MTR_7g116360 99.342 152 1 0 129 280 49 200 2.36e-101 302
MsG0480022106.01.T01 MTR_4g081010 80.645 279 1 1 2 280 3 228 9.21e-149 423
MsG0480022106.01.T01 MTR_4g081010 99.342 152 1 0 129 280 1 152 3.74e-101 301
MsG0480022106.01.T01 MTR_4g088485 75.269 279 1 2 2 280 3 213 1.37e-134 384
MsG0480022106.01.T01 MTR_4g088485 89.474 152 1 1 129 280 1 137 3.95e-87 263
MsG0480022106.01.T01 MTR_4g080920 71.685 279 26 1 2 280 3 228 1.83e-129 372
MsG0480022106.01.T01 MTR_4g080920 98.026 152 3 0 129 280 1 152 7.61e-101 299
MsG0480022106.01.T01 MTR_8g479250 71.478 291 51 5 2 276 3 277 1.47e-118 347
MsG0480022106.01.T01 MTR_8g479250 50.307 163 45 5 129 279 1 139 4.93e-33 126
MsG0480022106.01.T01 MTR_8g479250 72.000 75 10 1 2 76 219 282 3.36e-22 96.3
MsG0480022106.01.T01 MTR_5g092700 79.605 152 31 0 129 280 1 152 2.51e-80 244
MsG0480022106.01.T01 MTR_5g092700 59.113 203 30 1 2 204 3 152 7.09e-70 217
MsG0480022106.01.T01 MTR_5g092700 71.186 118 28 1 205 322 1 112 1.24e-45 154
MsG0480022106.01.T01 MTR_4g073580 79.605 152 31 0 129 280 1 152 2.51e-80 244
MsG0480022106.01.T01 MTR_4g073580 59.113 203 30 1 2 204 3 152 7.09e-70 217
MsG0480022106.01.T01 MTR_4g073580 71.186 118 28 1 205 322 1 112 1.24e-45 154
MsG0480022106.01.T01 MTR_4g073580 66.484 182 31 1 129 280 1 182 9.24e-74 228
MsG0480022106.01.T01 MTR_4g073580 51.502 233 30 2 2 204 3 182 2.39e-63 201
MsG0480022106.01.T01 MTR_4g081030 92.500 120 9 0 283 402 1 120 2.15e-73 234
MsG0480022106.01.T01 MTR_7g105080 98.701 77 1 0 129 205 1 77 1.07e-46 156
MsG0480022106.01.T01 MTR_7g105080 100.000 75 0 0 205 279 1 75 1.47e-45 154
MsG0480022106.01.T01 MTR_7g105080 100.000 68 0 0 2 69 3 70 4.15e-40 139
MsG0480022106.01.T01 MTR_3g092130 98.701 77 1 0 129 205 1 77 1.07e-46 156
MsG0480022106.01.T01 MTR_3g092130 100.000 75 0 0 205 279 1 75 1.47e-45 154
MsG0480022106.01.T01 MTR_3g092130 100.000 68 0 0 2 69 3 70 4.15e-40 139
MsG0480022106.01.T01 MTR_1g059690 98.701 77 1 0 129 205 1 77 1.07e-46 156
MsG0480022106.01.T01 MTR_1g059690 100.000 75 0 0 205 279 1 75 1.47e-45 154
MsG0480022106.01.T01 MTR_1g059690 100.000 68 0 0 2 69 3 70 4.15e-40 139
MsG0480022106.01.T01 MTR_3g092130 98.701 77 1 0 129 205 1 77 1.22e-46 157
MsG0480022106.01.T01 MTR_3g092130 100.000 75 0 0 205 279 1 75 1.74e-45 154
MsG0480022106.01.T01 MTR_3g092130 100.000 68 0 0 2 69 3 70 5.62e-40 139
MsG0480022106.01.T01 MTR_8g088060 97.436 78 2 0 129 206 1 78 3.96e-46 156
MsG0480022106.01.T01 MTR_8g088060 97.403 77 2 0 205 281 1 77 3.73e-45 153
MsG0480022106.01.T01 MTR_8g088060 100.000 68 0 0 2 69 3 70 1.25e-39 139
MsG0480022106.01.T01 MTR_5g033960 97.436 78 2 0 129 206 1 78 4.55e-46 155
MsG0480022106.01.T01 MTR_5g033960 97.403 77 2 0 205 281 1 77 4.28e-45 153
MsG0480022106.01.T01 MTR_5g033960 100.000 68 0 0 2 69 3 70 1.42e-39 139
MsG0480022106.01.T01 MTR_1g046640 71.053 76 22 0 129 204 240 315 5.14e-26 107
MsG0480022106.01.T01 MTR_1g046640 71.053 76 22 0 205 280 240 315 5.35e-26 107
MsG0480022106.01.T01 MTR_1g046640 70.588 68 20 0 2 69 242 309 6.40e-22 95.9
MsG0480022106.01.T01 MTR_1g046640 75.000 60 15 0 69 128 256 315 2.64e-19 88.2
MsG0480022106.01.T01 MTR_5g076810 70.130 77 22 1 205 280 194 270 9.81e-26 105
MsG0480022106.01.T01 MTR_5g076810 68.831 77 23 1 129 204 194 270 3.11e-25 103
MsG0480022106.01.T01 MTR_5g076810 69.565 69 20 1 2 69 196 264 5.50e-21 92.4
MsG0480022106.01.T01 MTR_5g076810 68.852 61 18 1 69 128 210 270 6.54e-18 83.6
MsG0480022106.01.T01 MTR_5g076660 63.855 83 30 0 119 201 256 338 2.90e-25 105
MsG0480022106.01.T01 MTR_5g076660 63.855 83 30 0 195 277 256 338 2.90e-25 105
MsG0480022106.01.T01 MTR_5g076660 69.118 68 21 0 2 69 268 335 1.00e-21 95.9
MsG0480022106.01.T01 MTR_5g076660 66.667 57 19 0 69 125 282 338 9.86e-16 78.2
MsG0480022106.01.T01 MTR_5g067400 69.737 76 23 0 205 280 241 316 2.91e-23 99.8
MsG0480022106.01.T01 MTR_5g067400 68.421 76 24 0 129 204 241 316 9.65e-23 98.2
MsG0480022106.01.T01 MTR_5g067400 67.647 68 22 0 2 69 243 310 3.07e-18 85.1
MsG0480022106.01.T01 MTR_5g067400 70.000 60 18 0 69 128 257 316 3.28e-16 79.3
MsG0480022106.01.T01 MTR_5g061310 60.000 75 30 0 129 203 2 76 8.39e-23 91.7
MsG0480022106.01.T01 MTR_5g061310 60.000 75 30 0 205 279 2 76 8.39e-23 91.7
MsG0480022106.01.T01 MTR_5g061310 60.294 68 27 0 2 69 4 71 1.11e-20 85.9
MsG0480022106.01.T01 MTR_5g061310 62.712 59 22 0 69 127 18 76 1.90e-17 77.0
MsG0480022106.01.T01 MTR_5g076370 59.036 83 34 0 119 201 257 339 2.98e-21 94.4
MsG0480022106.01.T01 MTR_5g076370 59.036 83 34 0 195 277 257 339 2.98e-21 94.4
MsG0480022106.01.T01 MTR_5g076370 61.765 68 26 0 2 69 269 336 2.18e-17 83.2
MsG0480022106.01.T01 MTR_5g076370 70.175 57 17 0 69 125 283 339 1.86e-16 80.5
MsG0480022106.01.T01 MTR_5g076505 61.333 75 29 0 129 203 240 314 2.51e-20 91.3
MsG0480022106.01.T01 MTR_5g076505 61.333 75 29 0 205 279 240 314 2.51e-20 91.3
MsG0480022106.01.T01 MTR_5g076505 63.235 68 25 0 2 69 242 309 5.17e-18 84.7
MsG0480022106.01.T01 MTR_5g076505 61.765 68 26 0 60 127 247 314 8.50e-17 80.9
MsG0480022106.01.T01 MTR_1g046650 57.895 76 32 0 205 280 171 246 3.21e-20 89.7
MsG0480022106.01.T01 MTR_1g046650 57.895 76 32 0 129 204 171 246 3.41e-20 89.4
MsG0480022106.01.T01 MTR_1g046650 65.000 60 21 0 69 128 187 246 7.45e-17 80.1
MsG0480022106.01.T01 MTR_1g046650 57.353 68 29 0 2 69 173 240 9.67e-17 79.7
MsG0480022106.01.T01 MTR_5g076740 56.790 81 34 1 203 282 84 164 3.69e-20 87.4
MsG0480022106.01.T01 MTR_5g076740 57.692 78 32 1 127 203 84 161 1.20e-19 85.9
MsG0480022106.01.T01 MTR_5g076740 63.333 60 22 0 68 127 102 161 9.62e-17 77.8
MsG0480022106.01.T01 MTR_5g076740 61.538 65 24 1 2 65 88 152 1.86e-16 77.0
MsG0480022106.01.T01 MTR_5g076720 65.333 75 26 0 129 203 315 389 4.39e-20 91.7
MsG0480022106.01.T01 MTR_5g076720 65.333 75 26 0 205 279 315 389 4.39e-20 91.7
MsG0480022106.01.T01 MTR_5g076720 63.235 68 25 0 2 69 317 384 3.73e-16 80.1
MsG0480022106.01.T01 MTR_5g076720 62.712 59 22 0 69 127 331 389 3.95e-13 70.9
MsG0480022106.01.T01 MTR_2g038430 61.333 75 29 0 129 203 268 342 4.48e-20 90.9
MsG0480022106.01.T01 MTR_2g038430 61.333 75 29 0 205 279 268 342 4.48e-20 90.9
MsG0480022106.01.T01 MTR_2g038430 66.154 65 22 0 2 66 270 334 1.57e-17 83.6
MsG0480022106.01.T01 MTR_2g038430 57.627 59 25 0 69 127 284 342 2.75e-12 67.8
MsG0480022106.01.T01 MTR_1g046650 57.895 76 32 0 129 204 240 315 6.23e-20 90.1
MsG0480022106.01.T01 MTR_1g046650 57.895 76 32 0 205 280 240 315 6.29e-20 90.1
MsG0480022106.01.T01 MTR_1g046650 65.000 60 21 0 69 128 256 315 1.09e-16 80.9
MsG0480022106.01.T01 MTR_1g046650 57.353 68 29 0 2 69 242 309 1.74e-16 80.1
MsG0480022106.01.T01 MTR_1g046650 57.895 76 32 0 205 280 240 315 8.90e-20 89.7
MsG0480022106.01.T01 MTR_1g046650 57.895 76 32 0 129 204 240 315 9.70e-20 89.7
MsG0480022106.01.T01 MTR_1g046650 65.000 60 21 0 69 128 256 315 1.76e-16 80.1
MsG0480022106.01.T01 MTR_1g046650 57.353 68 29 0 2 69 242 309 2.20e-16 79.7
MsG0480022106.01.T01 MTR_1g046650 57.895 76 32 0 205 280 271 346 1.44e-19 89.7
MsG0480022106.01.T01 MTR_1g046650 57.895 76 32 0 129 204 271 346 1.54e-19 89.4
MsG0480022106.01.T01 MTR_1g046650 65.000 60 21 0 69 128 287 346 2.43e-16 80.1
MsG0480022106.01.T01 MTR_1g046650 57.353 68 29 0 2 69 273 340 3.34e-16 79.7
MsG0480022106.01.T01 MTR_2g038420 60.000 75 30 0 129 203 260 334 2.58e-19 88.6
MsG0480022106.01.T01 MTR_2g038420 60.000 75 30 0 205 279 260 334 2.58e-19 88.6
MsG0480022106.01.T01 MTR_2g038420 58.209 67 28 0 2 68 262 328 2.52e-15 77.0
MsG0480022106.01.T01 MTR_2g038420 57.627 59 25 0 69 127 276 334 3.20e-12 67.8
MsG0480022106.01.T01 MTR_7g023330 41.600 125 59 2 289 402 10 131 3.50e-19 89.0
MsG0480022106.01.T01 MTR_7g094390 54.118 85 39 0 119 203 392 476 2.35e-18 87.0
MsG0480022106.01.T01 MTR_7g094390 54.118 85 39 0 195 279 392 476 2.35e-18 87.0
MsG0480022106.01.T01 MTR_7g094390 58.824 68 28 0 2 69 404 471 1.29e-15 79.0
MsG0480022106.01.T01 MTR_7g094390 61.017 59 23 0 69 127 418 476 5.34e-14 73.9
MsG0480022106.01.T01 MTR_4g080783 53.409 88 11 1 96 153 7 94 3.65e-18 79.3
MsG0480022106.01.T01 MTR_4g080783 53.409 88 11 1 172 229 7 94 3.65e-18 79.3
MsG0480022106.01.T01 MTR_5g076520 57.333 75 31 1 129 202 244 318 2.92e-17 82.4
MsG0480022106.01.T01 MTR_5g076520 57.333 75 31 1 205 278 244 318 2.92e-17 82.4
MsG0480022106.01.T01 MTR_5g076520 62.712 59 22 0 68 126 260 318 2.45e-15 76.6
MsG0480022106.01.T01 MTR_5g076520 57.353 68 28 1 2 68 246 313 1.91e-14 74.3
MsG0480022106.01.T01 MTR_7g023310 39.535 129 65 3 284 402 9 134 6.27e-17 82.8
MsG0480022106.01.T01 MTR_7g024290 60.526 76 29 1 129 203 241 316 1.22e-16 80.5
MsG0480022106.01.T01 MTR_7g024290 60.526 76 29 1 205 279 241 316 1.22e-16 80.5
MsG0480022106.01.T01 MTR_7g024290 59.420 69 27 1 2 69 243 311 1.23e-13 71.6
MsG0480022106.01.T01 MTR_7g024290 61.667 60 22 1 69 127 257 316 4.17e-11 63.9
MsG0480022106.01.T01 MTR_5g061290 53.333 75 35 0 129 203 252 326 8.30e-16 78.2
MsG0480022106.01.T01 MTR_5g061290 53.333 75 35 0 205 279 252 326 8.30e-16 78.2
MsG0480022106.01.T01 MTR_5g061290 51.471 68 33 0 2 69 254 321 5.16e-12 67.0
MsG0480022106.01.T01 MTR_4g009980 55.224 67 30 0 137 203 4 70 1.09e-15 71.6
MsG0480022106.01.T01 MTR_4g009980 55.224 67 30 0 213 279 4 70 1.09e-15 71.6
MsG0480022106.01.T01 MTR_4g009980 52.941 68 31 1 61 127 3 70 8.29e-14 66.6
MsG0480022106.01.T01 MTR_4g009980 55.932 59 26 0 8 66 4 62 2.94e-13 65.1
MsG0480022106.01.T01 MTR_5g039950 39.474 114 61 3 289 402 13 118 1.35e-15 78.6
MsG0480022106.01.T01 MTR_8g027610 31.953 169 103 6 117 278 26 189 3.32e-15 77.8
MsG0480022106.01.T01 MTR_8g027610 34.752 141 81 5 69 202 53 189 9.73e-14 73.2
MsG0480022106.01.T01 MTR_3g091400 32.500 160 104 4 124 280 22 180 4.03e-15 77.4
MsG0480022106.01.T01 MTR_3g091400 34.532 139 87 4 66 201 40 177 1.13e-13 73.2
MsG0480022106.01.T01 MTR_4g080773 37.671 146 62 5 283 402 1 143 3.75e-14 74.3
MsG0480022106.01.T01 MTR_4g080773 37.671 146 62 5 283 402 1 143 4.68e-14 73.9
MsG0480022106.01.T01 MTR_7g117395 31.053 190 110 7 129 298 37 225 4.75e-14 74.3
MsG0480022106.01.T01 MTR_7g117395 34.058 138 85 4 73 204 56 193 7.18e-13 70.5
MsG0480022106.01.T01 MTR_3g048290 35.000 140 74 3 277 402 1 137 4.77e-14 73.9
MsG0480022106.01.T01 MTR_2g088760 25.833 240 150 6 69 285 16 250 5.64e-14 71.6
MsG0480022106.01.T01 MTR_5g076780 54.688 64 29 0 14 77 4 67 7.55e-14 66.6
MsG0480022106.01.T01 MTR_5g076780 57.627 59 25 0 68 126 5 63 1.43e-13 65.9
MsG0480022106.01.T01 MTR_5g076780 58.333 60 25 0 143 202 4 63 1.52e-13 65.5
MsG0480022106.01.T01 MTR_5g076780 58.333 60 25 0 219 278 4 63 1.52e-13 65.5
MsG0480022106.01.T01 MTR_4g080787 38.889 126 50 4 283 382 1 125 9.97e-14 73.2
MsG0480022106.01.T01 MTR_5g076760 59.649 57 23 0 10 66 5 61 1.77e-13 65.9
MsG0480022106.01.T01 MTR_5g076760 59.649 57 23 0 139 195 5 61 1.77e-13 65.9
MsG0480022106.01.T01 MTR_5g076760 59.649 57 23 0 215 271 5 61 1.77e-13 65.9
MsG0480022106.01.T01 MTR_5g076760 61.538 52 20 0 68 119 10 61 4.57e-13 64.7
MsG0480022106.01.T01 MTR_4g080813 41.379 87 48 2 283 367 1 86 6.02e-13 65.1
MsG0480022106.01.T01 MTR_5g039970 54.386 57 26 0 292 348 12 68 6.25e-13 69.7
MsG0480022106.01.T01 MTR_5g076350 50.000 74 36 1 129 201 8 81 1.41e-12 63.5
MsG0480022106.01.T01 MTR_5g076350 50.000 74 36 1 205 277 8 81 1.41e-12 63.5
MsG0480022106.01.T01 MTR_5g076340 52.000 75 34 2 129 201 9 83 6.89e-12 61.6
MsG0480022106.01.T01 MTR_5g076340 52.000 75 34 2 205 277 9 83 6.89e-12 61.6
MsG0480022106.01.T01 MTR_3g113782 47.917 48 25 0 296 343 14 61 1.49e-11 60.8
MsG0480022106.01.T01 MTR_5g008950 32.710 107 66 2 301 402 1 106 4.72e-11 64.3
MsG0480022106.01.T01 MTR_8g468840 54.348 46 21 0 298 343 13 58 9.17e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480022106.01.T01 AT5G20620 91.749 303 2 1 2 281 79 381 0.0 542
MsG0480022106.01.T01 AT5G20620 92.053 302 1 1 2 280 3 304 0.0 541
MsG0480022106.01.T01 AT5G20620 99.342 152 1 0 129 280 1 152 7.81e-100 302
MsG0480022106.01.T01 AT5G03240 91.749 303 2 1 2 281 3 305 0.0 541
MsG0480022106.01.T01 AT5G03240 99.342 152 1 0 129 280 1 152 7.18e-101 302
MsG0480022106.01.T01 AT5G03240 91.749 303 2 1 2 281 3 305 0.0 541
MsG0480022106.01.T01 AT5G03240 99.342 152 1 0 129 280 1 152 7.18e-101 302
MsG0480022106.01.T01 AT5G03240 91.749 303 2 1 2 281 3 305 0.0 541
MsG0480022106.01.T01 AT5G03240 99.342 152 1 0 129 280 1 152 7.18e-101 302
MsG0480022106.01.T01 AT5G20620 91.749 303 2 1 2 281 3 305 0.0 541
MsG0480022106.01.T01 AT5G20620 99.342 152 1 0 129 280 1 152 7.18e-101 302
MsG0480022106.01.T01 AT4G05320 92.053 302 1 1 2 280 3 304 0.0 541
MsG0480022106.01.T01 AT4G05320 92.053 302 1 1 2 280 79 380 0.0 541
MsG0480022106.01.T01 AT4G05320 99.342 152 1 0 129 280 1 152 8.35e-100 302
MsG0480022106.01.T01 AT4G05320 92.053 302 1 1 2 280 3 304 0.0 541
MsG0480022106.01.T01 AT4G05320 92.053 302 1 1 2 280 79 380 0.0 541
MsG0480022106.01.T01 AT4G05320 99.342 152 1 0 129 280 1 152 8.35e-100 302
MsG0480022106.01.T01 AT4G05320 92.053 302 1 1 2 280 3 304 0.0 541
MsG0480022106.01.T01 AT4G05320 99.342 152 1 0 129 280 1 152 6.73e-101 302
MsG0480022106.01.T01 AT4G05320 92.053 302 1 1 2 280 3 304 0.0 541
MsG0480022106.01.T01 AT4G05320 92.053 302 1 1 2 280 79 380 0.0 541
MsG0480022106.01.T01 AT4G05320 99.342 152 1 0 129 280 1 152 8.35e-100 302
MsG0480022106.01.T01 AT4G05320 92.053 302 1 1 2 280 3 304 0.0 541
MsG0480022106.01.T01 AT4G05320 99.342 152 1 0 129 280 1 152 6.73e-101 302
MsG0480022106.01.T01 AT4G02890 92.053 302 1 1 2 280 3 304 0.0 541
MsG0480022106.01.T01 AT4G02890 99.342 152 1 0 129 280 1 152 6.73e-101 302
MsG0480022106.01.T01 AT4G02890 92.053 302 1 1 2 280 3 304 0.0 541
MsG0480022106.01.T01 AT4G02890 99.342 152 1 0 129 280 1 152 6.73e-101 302
MsG0480022106.01.T01 AT4G05320 92.053 302 1 1 2 280 3 304 0.0 541
MsG0480022106.01.T01 AT4G05320 92.053 302 1 1 2 280 79 380 0.0 541
MsG0480022106.01.T01 AT4G05320 92.053 302 1 1 2 280 155 456 0.0 541
MsG0480022106.01.T01 AT4G05320 99.342 152 1 0 129 280 1 152 9.24e-99 302
MsG0480022106.01.T01 AT4G05320 92.053 302 1 1 2 280 3 304 0.0 541
MsG0480022106.01.T01 AT4G05320 92.053 302 1 1 2 280 79 380 0.0 541
MsG0480022106.01.T01 AT4G05320 92.053 302 1 1 2 280 155 456 0.0 541
MsG0480022106.01.T01 AT4G05320 99.342 152 1 0 129 280 1 152 9.24e-99 302
MsG0480022106.01.T01 AT1G65350 85.804 317 7 3 2 281 3 318 0.0 507
MsG0480022106.01.T01 AT1G65350 98.684 152 1 1 129 280 1 151 1.66e-97 294
MsG0480022106.01.T01 AT5G37640 83.113 302 27 2 2 279 5 306 2.87e-169 476
MsG0480022106.01.T01 AT5G37640 85.463 227 9 2 2 204 81 307 5.37e-127 369
MsG0480022106.01.T01 AT5G37640 88.079 151 18 0 129 279 3 153 6.12e-86 265
MsG0480022106.01.T01 AT4G05050 80.645 279 1 1 2 280 3 228 1.35e-149 423
MsG0480022106.01.T01 AT4G05050 99.342 152 1 0 129 280 1 152 6.43e-102 302
MsG0480022106.01.T01 AT4G05050 80.645 279 1 1 2 280 3 228 1.35e-149 423
MsG0480022106.01.T01 AT4G05050 99.342 152 1 0 129 280 1 152 6.43e-102 302
MsG0480022106.01.T01 AT4G05050 80.645 279 1 1 2 280 3 228 1.35e-149 423
MsG0480022106.01.T01 AT4G05050 99.342 152 1 0 129 280 1 152 6.43e-102 302
MsG0480022106.01.T01 AT4G02890 80.645 279 1 1 2 280 3 228 1.35e-149 423
MsG0480022106.01.T01 AT4G02890 99.342 152 1 0 129 280 1 152 6.43e-102 302
MsG0480022106.01.T01 AT4G02890 80.645 279 1 1 2 280 3 228 1.35e-149 423
MsG0480022106.01.T01 AT4G02890 99.342 152 1 0 129 280 1 152 6.43e-102 302
MsG0480022106.01.T01 AT1G55060 94.366 213 12 0 69 281 17 229 4.81e-142 404
MsG0480022106.01.T01 AT1G55060 84.956 226 11 1 2 204 3 228 4.48e-129 371
MsG0480022106.01.T01 AT1G55060 92.105 152 12 0 129 280 1 152 1.20e-94 283
MsG0480022106.01.T01 AT3G09790 71.795 312 53 4 2 278 5 316 8.71e-137 405
MsG0480022106.01.T01 AT3G09790 68.847 321 63 4 2 285 81 401 6.78e-132 392
MsG0480022106.01.T01 AT3G09790 68.197 305 69 3 2 278 321 625 1.49e-124 374
MsG0480022106.01.T01 AT3G09790 61.095 347 90 7 2 308 240 581 1.01e-116 353
MsG0480022106.01.T01 AT3G09790 74.900 251 39 4 63 305 12 246 7.27e-114 346
MsG0480022106.01.T01 AT3G09790 89.404 151 16 0 129 279 3 153 2.14e-82 265
MsG0480022106.01.T01 AT3G09790 71.795 312 53 4 2 278 5 316 8.71e-137 405
MsG0480022106.01.T01 AT3G09790 68.847 321 63 4 2 285 81 401 6.78e-132 392
MsG0480022106.01.T01 AT3G09790 68.197 305 69 3 2 278 321 625 1.49e-124 374
MsG0480022106.01.T01 AT3G09790 61.095 347 90 7 2 308 240 581 1.01e-116 353
MsG0480022106.01.T01 AT3G09790 74.900 251 39 4 63 305 12 246 7.27e-114 346
MsG0480022106.01.T01 AT3G09790 89.404 151 16 0 129 279 3 153 2.14e-82 265
MsG0480022106.01.T01 AT4G05050 99.342 152 1 0 129 280 1 152 5.54e-103 301
MsG0480022106.01.T01 AT4G05050 73.529 204 1 1 2 205 3 153 1.27e-92 275
MsG0480022106.01.T01 AT4G05320 99.342 152 1 0 129 280 1 152 5.54e-103 301
MsG0480022106.01.T01 AT4G05320 73.529 204 1 1 2 205 3 153 1.27e-92 275
MsG0480022106.01.T01 AT1G31340 80.263 152 30 0 129 280 1 152 1.23e-80 245
MsG0480022106.01.T01 AT1G31340 58.454 207 33 1 2 208 3 156 2.63e-70 218
MsG0480022106.01.T01 AT1G31340 71.186 118 28 1 205 322 1 112 2.39e-45 154
MsG0480022106.01.T01 AT2G35635 79.605 152 31 0 129 280 1 152 9.78e-80 243
MsG0480022106.01.T01 AT2G35635 58.824 204 31 1 2 205 3 153 1.29e-69 216
MsG0480022106.01.T01 AT2G35635 71.186 118 28 1 205 322 1 112 1.62e-45 154
MsG0480022106.01.T01 AT3G52590 98.701 77 1 0 129 205 1 77 1.23e-46 156
MsG0480022106.01.T01 AT3G52590 100.000 75 0 0 205 279 1 75 1.57e-45 154
MsG0480022106.01.T01 AT3G52590 100.000 68 0 0 2 69 3 70 4.04e-40 139
MsG0480022106.01.T01 AT2G36170 98.701 77 1 0 129 205 1 77 1.23e-46 156
MsG0480022106.01.T01 AT2G36170 100.000 75 0 0 205 279 1 75 1.57e-45 154
MsG0480022106.01.T01 AT2G36170 100.000 68 0 0 2 69 3 70 4.04e-40 139
MsG0480022106.01.T01 AT3G62250 97.436 78 2 0 129 206 1 78 3.57e-46 156
MsG0480022106.01.T01 AT3G62250 98.684 76 1 0 205 280 1 76 3.19e-45 154
MsG0480022106.01.T01 AT3G62250 100.000 68 0 0 2 69 3 70 1.14e-39 139
MsG0480022106.01.T01 AT2G47110 97.436 78 2 0 129 206 1 78 3.68e-46 156
MsG0480022106.01.T01 AT2G47110 98.684 76 1 0 205 280 1 76 3.29e-45 154
MsG0480022106.01.T01 AT2G47110 100.000 68 0 0 2 69 3 70 1.12e-39 139
MsG0480022106.01.T01 AT2G47110 97.436 78 2 0 129 206 1 78 3.68e-46 156
MsG0480022106.01.T01 AT2G47110 98.684 76 1 0 205 280 1 76 3.29e-45 154
MsG0480022106.01.T01 AT2G47110 100.000 68 0 0 2 69 3 70 1.12e-39 139
MsG0480022106.01.T01 AT1G23410 100.000 76 0 0 129 204 1 76 6.69e-46 155
MsG0480022106.01.T01 AT1G23410 98.684 76 1 0 205 280 1 76 5.31e-45 153
MsG0480022106.01.T01 AT1G23410 100.000 68 0 0 2 69 3 70 1.89e-39 139
MsG0480022106.01.T01 AT1G53930 49.091 165 54 7 136 277 1 158 9.93e-33 121
MsG0480022106.01.T01 AT1G53930 44.279 201 63 9 7 201 1 158 2.41e-31 117
MsG0480022106.01.T01 AT1G53930 75.362 69 17 0 2 70 88 156 1.19e-28 110
MsG0480022106.01.T01 AT1G53950 41.212 165 56 3 123 280 14 144 9.07e-26 102
MsG0480022106.01.T01 AT1G53950 49.541 109 49 1 101 203 35 143 1.64e-24 98.6
MsG0480022106.01.T01 AT1G53950 62.687 67 25 0 2 68 71 137 1.81e-21 90.1
MsG0480022106.01.T01 AT1G53950 41.860 129 65 4 2 127 22 143 1.56e-18 82.0
MsG0480022106.01.T01 AT1G11980 54.545 77 35 0 129 205 1 77 4.61e-22 89.7
MsG0480022106.01.T01 AT1G11980 53.247 77 36 0 205 281 1 77 3.10e-21 87.4
MsG0480022106.01.T01 AT1G11980 52.941 68 32 0 2 69 3 70 1.89e-17 77.0
MsG0480022106.01.T01 AT1G11980 52.459 61 29 0 69 129 17 77 1.86e-16 74.3
MsG0480022106.01.T01 AT2G46500 35.862 145 90 2 135 276 40 184 1.14e-18 87.8
MsG0480022106.01.T01 AT2G46500 27.273 198 101 5 6 171 40 226 1.55e-11 66.2
MsG0480022106.01.T01 AT2G46500 35.862 145 90 2 135 276 40 184 2.16e-18 87.4
MsG0480022106.01.T01 AT2G46500 27.273 198 101 5 6 171 40 226 2.91e-11 65.5
MsG0480022106.01.T01 AT2G46500 35.862 145 90 2 135 276 40 184 2.16e-18 87.4
MsG0480022106.01.T01 AT2G46500 27.273 198 101 5 6 171 40 226 2.91e-11 65.5
MsG0480022106.01.T01 AT1G53945 38.356 146 53 3 129 271 1 112 5.24e-17 77.0
MsG0480022106.01.T01 AT1G53945 42.268 97 54 1 101 195 16 112 2.29e-14 69.7
MsG0480022106.01.T01 AT1G53945 42.857 70 40 0 2 71 48 117 8.43e-11 59.7
MsG0480022106.01.T01 AT5G24240 33.793 145 91 3 135 275 38 181 2.18e-13 72.4
MsG0480022106.01.T01 AT5G24240 34.074 135 84 3 69 199 48 181 9.34e-12 67.0
MsG0480022106.01.T01 AT5G24240 33.793 145 91 3 135 275 38 181 2.18e-13 72.4
MsG0480022106.01.T01 AT5G24240 34.074 135 84 3 69 199 48 181 9.34e-12 67.0

Find 100 sgRNAs with CRISPR-Local

Find 324 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATGCAGAGTAGATTCTTTC+TGG 0.169507 4:-68330557 None:intergenic
CTCCCACCTTCTTGCTAATA+TGG 0.238026 4:-68334569 None:intergenic
ATATAGAAAACATTGTAATT+TGG 0.267726 4:-68334740 None:intergenic
CTTAGCTTTAACGTTGTCTA+TGG 0.286029 4:-68329984 None:intergenic
GGAAGTTCCTATGGCATCTT+TGG 0.292605 4:-68334548 None:intergenic
CAGCAAAGGCTTATCTTTGC+AGG 0.320855 4:+68330037 MsG0480022106.01.T01:CDS
CAGCAGAGACTTATCTTTGC+AGG 0.340435 4:+68330264 MsG0480022106.01.T01:CDS
ATATTTGTGAAGACACTTAC+TGG 0.340523 4:+68330609 MsG0480022106.01.T01:CDS
TTGAAGAGCTGAATATTTCC+TGG 0.343087 4:+68334782 MsG0480022106.01.T01:CDS
CAACGTGAAGGCAAAGATTC+AGG 0.361254 4:+68330446 MsG0480022106.01.T01:CDS
AAGATAAGCCTTTGCTGATC+AGG 0.368033 4:-68330031 None:intergenic
AAAATAAGCCTTTGCTGGTC+TGG 0.369394 4:-68330714 None:intergenic
CAAGAAGGTGGGAGTCTTTG+TGG 0.383067 4:+68334578 MsG0480022106.01.T01:CDS
TGGGTTAGGCAGCACTGATA+TGG 0.388272 4:+68334423 MsG0480022106.01.T01:intron
TACTGGGAAGACTATTACCT+TGG 0.388796 4:+68330626 MsG0480022106.01.T01:CDS
AAAATTAGCCTCTGCTGGTC+TGG 0.389472 4:-68330486 None:intergenic
AATGAAGGGTGGATTCCTTC+TGG 0.393830 4:-68330102 None:intergenic
GAAGGAATCCACCCTTCATT+TGG 0.394555 4:+68330105 MsG0480022106.01.T01:CDS
TAACGTGAAAGCTAAGATTC+AGG 0.404656 4:+68330218 MsG0480022106.01.T01:CDS
GTTCCTATGGCATCTTTGGC+AGG 0.413992 4:-68334544 None:intergenic
TGCTAATATGGAAGTTCCTA+TGG 0.415188 4:-68334557 None:intergenic
AAAGGAATCGACTCTCCATT+TGG 0.417045 4:+68330332 MsG0480022106.01.T01:CDS
GGTCTAGTAGGACTGCAATT+AGG 0.417375 4:+68334674 MsG0480022106.01.T01:CDS
TACTGGAAAGACAATAACTT+TGG 0.434360 4:+68330398 MsG0480022106.01.T01:CDS
GAAAGCTAAGATTCAGGATA+AGG 0.439506 4:+68330224 MsG0480022106.01.T01:CDS
AAGATAAGTCTCTGCTGATC+AGG 0.446983 4:-68330258 None:intergenic
TTTGAATGTTATAATCTGCT+AGG 0.453272 4:-68330311 None:intergenic
TGGAAAGACAATAACTTTGG+AGG 0.458143 4:+68330401 MsG0480022106.01.T01:CDS
TCAATCTAAGCACCAAATGA+AGG 0.460679 4:-68330117 None:intergenic
CTGCGAAAATTAGCCTCTGC+TGG 0.469290 4:-68330491 None:intergenic
GTTGGAAGATGGCCGTACTT+TGG 0.469918 4:+68330521 MsG0480022106.01.T01:CDS
ACGGATTAGGCTTTAAATCC+AGG 0.474955 4:-68334800 None:intergenic
GAGGGATACCCTCTTTGTCC+TGG 0.479780 4:-68330009 None:intergenic
CACGAAGCCTCAAAACCAAA+TGG 0.484478 4:-68330347 None:intergenic
AGCACTGATATGGCTGGTAC+AGG 0.484874 4:+68334433 MsG0480022106.01.T01:CDS
GCAGGTAAGCAGCTTGAAGA+TGG 0.489025 4:+68330282 MsG0480022106.01.T01:CDS
TAGTTCACATACTACTTAAG+AGG 0.490482 4:+68334653 MsG0480022106.01.T01:CDS
GTTGGAGGATGGTCGTACTT+TGG 0.490504 4:+68330749 MsG0480022106.01.T01:CDS
GCAGGAAAGCAGTTGGAAGA+TGG 0.496348 4:+68330510 MsG0480022106.01.T01:CDS
ATGTGATGAAGAATGTCATC+AGG 0.500038 4:-68334508 None:intergenic
AGCAGATTATAACATTCAAA+AGG 0.500774 4:+68330314 MsG0480022106.01.T01:CDS
TCTGGATGTTATAATCAGCT+AGG 0.505255 4:-68330084 None:intergenic
TGGGAAGACTATTACCTTGG+AGG 0.507917 4:+68330629 MsG0480022106.01.T01:CDS
GGCAAAGATTCAGGACAAAG+AGG 0.508064 4:+68330455 MsG0480022106.01.T01:CDS
TTGAATGTTATAATCTGCTA+GGG 0.510798 4:-68330310 None:intergenic
TTTAACGTTGTCTATGGTAT+CGG 0.513659 4:-68329978 None:intergenic
CACTACCATGCATTGCAATA+CGG 0.517035 4:-68334699 None:intergenic
ATCTTTGTGAAAACATTGAC+TGG 0.518562 4:+68329926 MsG0480022106.01.T01:CDS
TAACGTGAAAGCGAAGATAC+AGG 0.523093 4:+68330674 MsG0480022106.01.T01:CDS
TACTACTTAAGAGGTCTAGT+AGG 0.529383 4:+68334662 MsG0480022106.01.T01:CDS
AACTAGATCAAAGAGTTGAT+TGG 0.530287 4:-68334635 None:intergenic
GCTGGCAAGCAGTTGGAGGA+TGG 0.535241 4:+68330738 MsG0480022106.01.T01:CDS
CGTATTGCAATGCATGGTAG+TGG 0.535833 4:+68334700 MsG0480022106.01.T01:CDS
GCAGGGAAACAACTAGAAGA+TGG 0.551920 4:+68330055 MsG0480022106.01.T01:CDS
GAAAGCGAAGATACAGGATA+AGG 0.552277 4:+68330680 MsG0480022106.01.T01:CDS
ATAAGCCTTTGCTGGTCTGG+TGG 0.552962 4:-68330711 None:intergenic
GCTAAGATCCAGGACAAAGA+GGG 0.553645 4:+68330001 MsG0480022106.01.T01:CDS
TATTATAATCAGCCAAAGTA+CGG 0.554208 4:-68330533 None:intergenic
GGAGGCGAAGAACAAGATGC+AGG 0.555285 4:-68330800 None:intergenic
AGCGAAGATACAGGATAAGG+AGG 0.570060 4:+68330683 MsG0480022106.01.T01:CDS
TATCGGAACTCTCCACCTCA+AGG 0.571054 4:-68329961 None:intergenic
AGCAAAGGCTTATCTTTGCA+GGG 0.572317 4:+68330038 MsG0480022106.01.T01:CDS
GAAGACTATTACCTTGGAGG+TGG 0.573223 4:+68330632 MsG0480022106.01.T01:CDS
TTAGGCAGCACTGATATGGC+TGG 0.574137 4:+68334427 MsG0480022106.01.T01:intron
ATCAGAGCTTTCCACCTCCA+AGG 0.576914 4:-68330643 None:intergenic
AGCTAAGATCCAGGACAAAG+AGG 0.577335 4:+68330000 MsG0480022106.01.T01:CDS
CAACGTTAAAGCTAAGATCC+AGG 0.579340 4:+68329991 MsG0480022106.01.T01:CDS
ATAAGTCTCTGCTGATCAGG+AGG 0.579520 4:-68330255 None:intergenic
TATTTGTGAAGACACTTACT+GGG 0.579572 4:+68330610 MsG0480022106.01.T01:CDS
TTCCTATGGCATCTTTGGCA+GGG 0.580111 4:-68334543 None:intergenic
GAACTTCCATATTAGCAAGA+AGG 0.581633 4:+68334563 MsG0480022106.01.T01:CDS
AGATCAAAGAGTTGATTGGT+TGG 0.583868 4:-68334631 None:intergenic
CTTCCATATTAGCAAGAAGG+TGG 0.589605 4:+68334566 MsG0480022106.01.T01:CDS
CAATCTAAGCACCAAATGAA+GGG 0.592660 4:-68330116 None:intergenic
GCAAAGATTCAGGACAAAGA+GGG 0.596107 4:+68330456 MsG0480022106.01.T01:CDS
CTGGATGTTATAATCAGCTA+GGG 0.596159 4:-68330083 None:intergenic
GCACTGATATGGCTGGTACA+GGG 0.597757 4:+68334434 MsG0480022106.01.T01:CDS
GTAAGCAGCTTGAAGATGGA+AGG 0.599229 4:+68330286 MsG0480022106.01.T01:CDS
ATAAGCCTTTGCTGATCAGG+AGG 0.601820 4:-68330028 None:intergenic
CAAAACTATCACCCTTGAGG+TGG 0.603955 4:+68329949 MsG0480022106.01.T01:CDS
GCTAAGATTCAGGATAAGGA+AGG 0.604069 4:+68330228 MsG0480022106.01.T01:CDS
ATCGGAACTCTCCACCTCAA+GGG 0.605003 4:-68329960 None:intergenic
ATTAGCCTCTGCTGGTCTGG+AGG 0.607654 4:-68330483 None:intergenic
GTATTCCACCAGACCAGCAA+AGG 0.618403 4:+68330706 MsG0480022106.01.T01:CDS
AGGCTCCGTATTGCAATGCA+TGG 0.619434 4:+68334694 MsG0480022106.01.T01:CDS
TTCCATATTAGCAAGAAGGT+GGG 0.622027 4:+68334567 MsG0480022106.01.T01:CDS
GCGAAGATACAGGATAAGGA+GGG 0.623735 4:+68330684 MsG0480022106.01.T01:CDS
GGAAACAACTAGAAGATGGA+AGG 0.625020 4:+68330059 MsG0480022106.01.T01:CDS
GCATTCCTCCAGACCAGCAG+AGG 0.627413 4:+68330478 MsG0480022106.01.T01:CDS
CATCTTGTTCTTCGCCTCCG+TGG 0.627545 4:+68330804 MsG0480022106.01.T01:CDS
GTATCCCTCCTGATCAGCAA+AGG 0.628874 4:+68330023 MsG0480022106.01.T01:CDS
CTCCCTGCCAAAGATGCCAT+AGG 0.642987 4:+68334541 MsG0480022106.01.T01:CDS
TAAGCCTTTGCTGATCAGGA+GGG 0.645279 4:-68330027 None:intergenic
TCTAAGCACCAAATGAAGGG+TGG 0.651428 4:-68330113 None:intergenic
GAGGCGAAGAACAAGATGCA+GGG 0.658046 4:-68330799 None:intergenic
TAAGTCTCTGCTGATCAGGA+GGG 0.659405 4:-68330254 None:intergenic
TGATACAATTGACAACGTGA+AGG 0.663572 4:+68330434 MsG0480022106.01.T01:CDS
TGGCAAAACTATCACCCTTG+AGG 0.672689 4:+68329946 MsG0480022106.01.T01:CDS
AGCTGATTATAACATCCAGA+AGG 0.677696 4:+68330087 MsG0480022106.01.T01:CDS
AAACTTAGTAGCCACCACGG+AGG 0.802224 4:-68330818 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATAACAAAAACAATATA+AGG - Chr4:68334403-68334422 None:intergenic 10.0%
!! ACAATAAAAATATATAATGT+AGG + Chr4:68334457-68334476 MsG0480022106.01.T01:CDS 10.0%
!!! AATTAAATATTTTAACATCA+AGG - Chr4:68331592-68331611 None:intergenic 10.0%
!!! ATATTGTTTTTGTTATTTTT+GGG + Chr4:68334404-68334423 MsG0480022106.01.T01:intron 10.0%
!!! TATATTGTTTTTGTTATTTT+TGG + Chr4:68334403-68334422 MsG0480022106.01.T01:intron 10.0%
!! AAAATATAATGCAGAAAAAA+AGG - Chr4:68334154-68334173 None:intergenic 15.0%
!! AAATCAGAAAAATAAAAGAA+AGG - Chr4:68332390-68332409 None:intergenic 15.0%
!! AATAACCAGAAAAAAAAAAA+AGG - Chr4:68330998-68331017 None:intergenic 15.0%
!! AATCAGAAAAATAAAAGAAA+GGG - Chr4:68332389-68332408 None:intergenic 15.0%
!! AGATACACAAAAATATATTA+AGG - Chr4:68330847-68330866 None:intergenic 15.0%
!! ATAATAAACATGTACTTATA+AGG - Chr4:68331664-68331683 None:intergenic 15.0%
!! ATAGTATTTATAGTAAATCT+GGG - Chr4:68333901-68333920 None:intergenic 15.0%
!! ATATAGAAAACATTGTAATT+TGG - Chr4:68334743-68334762 None:intergenic 15.0%
!! GATACACAAAAATATATTAA+GGG - Chr4:68330846-68330865 None:intergenic 15.0%
!! TACAATAATATATATTTCGA+TGG - Chr4:68332896-68332915 None:intergenic 15.0%
!! TATAGTATTTATAGTAAATC+TGG - Chr4:68333902-68333921 None:intergenic 15.0%
!! TCTAGAGAAAAAAAATTAAA+GGG + Chr4:68332245-68332264 MsG0480022106.01.T01:intron 15.0%
!!! AAATATGTTTTTCTTAAAAC+GGG + Chr4:68332222-68332241 MsG0480022106.01.T01:intron 15.0%
!!! ATATATATGTTACAAAGTTT+TGG + Chr4:68334297-68334316 MsG0480022106.01.T01:intron 15.0%
!!! ATGAAACAATATCTTATTTT+TGG + Chr4:68333473-68333492 MsG0480022106.01.T01:intron 15.0%
!!! CAAATATGTTTTTCTTAAAA+CGG + Chr4:68332221-68332240 MsG0480022106.01.T01:intron 15.0%
!!! TAAAAATCCTATTTTTATCT+TGG + Chr4:68333500-68333519 MsG0480022106.01.T01:intron 15.0%
!!! TAATATATTTTTGTGTATCT+CGG + Chr4:68330847-68330866 MsG0480022106.01.T01:intron 15.0%
!! AAAAGAGACTTTATAGTTTA+TGG + Chr4:68332035-68332054 MsG0480022106.01.T01:intron 20.0%
!! AATAAAATTGATGTAAGGTT+TGG + Chr4:68332730-68332749 MsG0480022106.01.T01:intron 20.0%
!! ACAAAAAATATATGCAGAAA+AGG - Chr4:68334070-68334089 None:intergenic 20.0%
!! ACAATAAGTAAGTATATTGA+AGG - Chr4:68331632-68331651 None:intergenic 20.0%
!! ACTAACAAAATGCATAATTA+GGG - Chr4:68331560-68331579 None:intergenic 20.0%
!! ATTAAATAGTGTATGATTTG+TGG + Chr4:68331088-68331107 MsG0480022106.01.T01:intron 20.0%
!! ATTGTAACATCTAATTAATC+TGG - Chr4:68333171-68333190 None:intergenic 20.0%
!! GAAAGAAAAAGATAAGATAA+AGG - Chr4:68332323-68332342 None:intergenic 20.0%
!! GTCTAGAGAAAAAAAATTAA+AGG + Chr4:68332244-68332263 MsG0480022106.01.T01:intron 20.0%
!! GTTACTTGATTATAACATAA+AGG + Chr4:68332611-68332630 MsG0480022106.01.T01:intron 20.0%
!! TAGTATTTATAGTAAATCTG+GGG - Chr4:68333900-68333919 None:intergenic 20.0%
!! TATAACATAAAGACTAAATG+TGG + Chr4:68332561-68332580 MsG0480022106.01.T01:intron 20.0%
!! TATTGTTTATGATGAAGATT+TGG - Chr4:68332523-68332542 None:intergenic 20.0%
!! TTAAAGGAAGAAGATAAAAT+AGG - Chr4:68331306-68331325 None:intergenic 20.0%
!! TTGTAACATCTAATTAATCT+GGG - Chr4:68333170-68333189 None:intergenic 20.0%
!!! AAGTTTGTTGTATAATTTTG+TGG + Chr4:68332705-68332724 MsG0480022106.01.T01:intron 20.0%
!!! ATGAAGTTAGAATATTCTTT+TGG + Chr4:68332789-68332808 MsG0480022106.01.T01:intron 20.0%
!!! GTTAGTTTTGTAGAAAAAAA+GGG + Chr4:68331878-68331897 MsG0480022106.01.T01:intron 20.0%
!!! GTTTTAATTTTACGTTCTTT+CGG + Chr4:68333662-68333681 MsG0480022106.01.T01:intron 20.0%
!!! TGATTTCATTTTATTTTGAC+AGG + Chr4:68333557-68333576 MsG0480022106.01.T01:intron 20.0%
!!! TTGAAATTTTGATACAATGA+AGG + Chr4:68331764-68331783 MsG0480022106.01.T01:intron 20.0%
! AAGACAGAATTAGAAACTAA+AGG - Chr4:68330922-68330941 None:intergenic 25.0%
! ACAGAAATAAGAAAATAGCT+TGG + Chr4:68331402-68331421 MsG0480022106.01.T01:intron 25.0%
! ACTAACATAATACACAATCA+AGG + Chr4:68331736-68331755 MsG0480022106.01.T01:intron 25.0%
! AGAAAATAATTGCCTCAAAT+AGG + Chr4:68331912-68331931 MsG0480022106.01.T01:intron 25.0%
! AGACAGAATTAGAAACTAAA+GGG - Chr4:68330921-68330940 None:intergenic 25.0%
! AGCAAAACCAAGATAAAAAT+AGG - Chr4:68333510-68333529 None:intergenic 25.0%
! AGCAGATTATAACATTCAAA+AGG + Chr4:68330314-68330333 MsG0480022106.01.T01:CDS 25.0%
! AGTATTTATAGTAAATCTGG+GGG - Chr4:68333899-68333918 None:intergenic 25.0%
! AGTCGTTAATACATCTAATT+AGG - Chr4:68331195-68331214 None:intergenic 25.0%
! ATAATGCAGAAAAAAAGGAA+AGG - Chr4:68334149-68334168 None:intergenic 25.0%
! ATCTTGAGTAAAAATTTAGG+GGG - Chr4:68334325-68334344 None:intergenic 25.0%
! ATTACGCAAAGAAAATCAAA+TGG + Chr4:68331828-68331847 MsG0480022106.01.T01:intron 25.0%
! ATTGACAAAAAATCTTCAAC+AGG + Chr4:68334181-68334200 MsG0480022106.01.T01:intron 25.0%
! CTGAGTTAAACTAAAATCTT+GGG - Chr4:68331983-68332002 None:intergenic 25.0%
! CTTTGTGAAATGTAATATGA+TGG + Chr4:68331353-68331372 MsG0480022106.01.T01:intron 25.0%
! GACTAACAAAATGCATAATT+AGG - Chr4:68331561-68331580 None:intergenic 25.0%
! GATCTTGAGTAAAAATTTAG+GGG - Chr4:68334326-68334345 None:intergenic 25.0%
! GGATCTTGAGTAAAAATTTA+GGG - Chr4:68334327-68334346 None:intergenic 25.0%
! GTGGAAAAGAAAAAGATAAA+AGG + Chr4:68332580-68332599 MsG0480022106.01.T01:intron 25.0%
! TAATTCTGTCTTAAGAAGAT+TGG + Chr4:68330930-68330949 MsG0480022106.01.T01:intron 25.0%
! TAGTATTGTGTCAATAGTTT+AGG + Chr4:68331228-68331247 MsG0480022106.01.T01:intron 25.0%
! TATTATAATCAGCCAAAGTA+CGG - Chr4:68330536-68330555 None:intergenic 25.0%
! TCAATCATTGTAAATCTTTG+CGG + Chr4:68333731-68333750 MsG0480022106.01.T01:intron 25.0%
! TCGATGATAACAACAAAAAA+TGG - Chr4:68332155-68332174 None:intergenic 25.0%
! TGGCAAATAAAATTGATGTA+AGG + Chr4:68332725-68332744 MsG0480022106.01.T01:intron 25.0%
! TTGAATGTTATAATCTGCTA+GGG - Chr4:68330313-68330332 None:intergenic 25.0%
! TTTGAATGTTATAATCTGCT+AGG - Chr4:68330314-68330333 None:intergenic 25.0%
! TTTGTTTCATTGAATAAGCA+AGG - Chr4:68334272-68334291 None:intergenic 25.0%
!! AAACTATAAAGTCTCTTTTC+CGG - Chr4:68332034-68332053 None:intergenic 25.0%
!! AACATTCTTCTGTTGTTTAA+AGG - Chr4:68331322-68331341 None:intergenic 25.0%
!! AGGATAATTTTGCATGTAAA+AGG + Chr4:68331251-68331270 MsG0480022106.01.T01:intron 25.0%
!! CACAATAACTCTTTTCATAT+AGG - Chr4:68331696-68331715 None:intergenic 25.0%
!!! CTAAAGCTTTGAAGAAAAAA+GGG + Chr4:68331458-68331477 MsG0480022106.01.T01:intron 25.0%
!!! GATGTTGATTTCATGTAATT+TGG + Chr4:68331151-68331170 MsG0480022106.01.T01:intron 25.0%
!!! GGTTAGTTTTGTAGAAAAAA+AGG + Chr4:68331877-68331896 MsG0480022106.01.T01:intron 25.0%
!!! GTTTTTGTTATTTTTGGGTT+AGG + Chr4:68334409-68334428 MsG0480022106.01.T01:intron 25.0%
!!! TAAAGCTTTGAAGAAAAAAG+GGG + Chr4:68331459-68331478 MsG0480022106.01.T01:intron 25.0%
!!! TATCTGCATTTAATTTTGAC+AGG + Chr4:68334608-68334627 MsG0480022106.01.T01:CDS 25.0%
AAGAAAATCAAATGGATGTC+AGG + Chr4:68331836-68331855 MsG0480022106.01.T01:intron 30.0%
AATTCTTTGCTTTGCATTTG+CGG + Chr4:68333342-68333361 MsG0480022106.01.T01:intron 30.0%
AATTTCATAACGGTTTACTG+TGG - Chr4:68330969-68330988 None:intergenic 30.0%
ATATTTGTGAAGACACTTAC+TGG + Chr4:68330609-68330628 MsG0480022106.01.T01:CDS 30.0%
ATCCAAATAAATTGCGTCAT+CGG + Chr4:68332198-68332217 MsG0480022106.01.T01:intron 30.0%
ATCTTTGTGAAAACATTGAC+TGG + Chr4:68329926-68329945 MsG0480022106.01.T01:CDS 30.0%
ATGACTAATCATTACACATC+AGG + Chr4:68331792-68331811 MsG0480022106.01.T01:intron 30.0%
ATTGACAAAAATCTTCTACC+AGG + Chr4:68334093-68334112 MsG0480022106.01.T01:intron 30.0%
CAACCTAAACACCATTTATT+AGG - Chr4:68330889-68330908 None:intergenic 30.0%
CAATCATTGTAAATCTTTGC+GGG + Chr4:68333732-68333751 MsG0480022106.01.T01:intron 30.0%
CACTTAAAATATGTAGAACC+TGG + Chr4:68332065-68332084 MsG0480022106.01.T01:intron 30.0%
CAGAAAAAAAAAAAAGGCCA+TGG - Chr4:68330992-68331011 None:intergenic 30.0%
CCTGAGTTAAACTAAAATCT+TGG - Chr4:68331984-68332003 None:intergenic 30.0%
CGGATCTTGAGTAAAAATTT+AGG - Chr4:68334328-68334347 None:intergenic 30.0%
CGTTAATACATCTAATTAGG+CGG - Chr4:68331192-68331211 None:intergenic 30.0%
CTACAAACTTATCCTATTTG+AGG - Chr4:68331927-68331946 None:intergenic 30.0%
GAAGTATATGTTCATGTAAC+TGG + Chr4:68333781-68333800 MsG0480022106.01.T01:intron 30.0%
GAATAAGCAAGGTTCTTATA+TGG - Chr4:68334261-68334280 None:intergenic 30.0%
GTATTTATAGTAAATCTGGG+GGG - Chr4:68333898-68333917 None:intergenic 30.0%
GTTAATACATCTAATTAGGC+GGG - Chr4:68331191-68331210 None:intergenic 30.0%
TAAACCGTTATGAAATTCCA+TGG + Chr4:68330972-68330991 MsG0480022106.01.T01:intron 30.0%
TAAATAATCGTGAGAATGTG+TGG - Chr4:68333107-68333126 None:intergenic 30.0%
TACTGGAAAGACAATAACTT+TGG + Chr4:68330398-68330417 MsG0480022106.01.T01:CDS 30.0%
TAGTTCACATACTACTTAAG+AGG + Chr4:68334653-68334672 MsG0480022106.01.T01:CDS 30.0%
TATTGTGTCAATAGTTTAGG+AGG + Chr4:68331231-68331250 MsG0480022106.01.T01:intron 30.0%
TATTTGTGAAGACACTTACT+GGG + Chr4:68330610-68330629 MsG0480022106.01.T01:CDS 30.0%
TGACTAATCATTACACATCA+GGG + Chr4:68331793-68331812 MsG0480022106.01.T01:intron 30.0%
TTGAGAAAAGAAACAAAGAG+AGG + Chr4:68333228-68333247 MsG0480022106.01.T01:intron 30.0%
TTGCCTAATAAATGGTGTTT+AGG + Chr4:68330883-68330902 MsG0480022106.01.T01:intron 30.0%
TTTAACGTTGTCTATGGTAT+CGG - Chr4:68329981-68330000 None:intergenic 30.0%
! AAAATATAAACTGACTCTGC+TGG - Chr4:68333139-68333158 None:intergenic 30.0%
! AAATGTAATATGATGGTGTG+TGG + Chr4:68331360-68331379 MsG0480022106.01.T01:intron 30.0%
! AACTAGATCAAAGAGTTGAT+TGG - Chr4:68334638-68334657 None:intergenic 30.0%
! AAGGCTTTTTATCACCTAAA+GGG - Chr4:68334220-68334239 None:intergenic 30.0%
! AATGTAATATGATGGTGTGT+GGG + Chr4:68331361-68331380 MsG0480022106.01.T01:intron 30.0%
! ACAGAAGAATGTTACTTGTT+TGG + Chr4:68331329-68331348 MsG0480022106.01.T01:intron 30.0%
! ATCCACTTGAATTAGTCTAT+TGG - Chr4:68333022-68333041 None:intergenic 30.0%
! ATTTTTGTGAAGACTCTTAC+TGG + Chr4:68330381-68330400 MsG0480022106.01.T01:CDS 30.0%
! TTGAATTAGTCTATTGGTGT+TGG - Chr4:68333016-68333035 None:intergenic 30.0%
! TTTTGTAGAAAAAAAGGGTG+AGG + Chr4:68331883-68331902 MsG0480022106.01.T01:intron 30.0%
!! AGGGTTTTATAATTAGAGAG+AGG + Chr4:68332264-68332283 MsG0480022106.01.T01:intron 30.0%
!! CTCTTTGTTTCTTTTCTCAA+TGG - Chr4:68333228-68333247 None:intergenic 30.0%
!! GCTAAAGCTTTGAAGAAAAA+AGG + Chr4:68331457-68331476 MsG0480022106.01.T01:intron 30.0%
!! GGGTTTTATAATTAGAGAGA+GGG + Chr4:68332265-68332284 MsG0480022106.01.T01:intron 30.0%
!! TTGAAGTTTTGATCCATTGA+AGG - Chr4:68331532-68331551 None:intergenic 30.0%
!!! CATGGCCTTTTTTTTTTTTC+TGG + Chr4:68330990-68331009 MsG0480022106.01.T01:intron 30.0%
!!! CCAAGATTTTAGTTTAACTC+AGG + Chr4:68331981-68332000 MsG0480022106.01.T01:intron 30.0%
!!! TTTTGAAACAACAGGTCATT+TGG + Chr4:68333975-68333994 MsG0480022106.01.T01:intron 30.0%
AAAAGGGGTAATAGTCACTT+TGG + Chr4:68331474-68331493 MsG0480022106.01.T01:intron 35.0%
AAAATCAAATGGATGTCAGG+AGG + Chr4:68331839-68331858 MsG0480022106.01.T01:intron 35.0%
AAATAGCTTGGTCACTATGT+AGG + Chr4:68331414-68331433 MsG0480022106.01.T01:intron 35.0%
AAGGCCATGGAATTTCATAA+CGG - Chr4:68330979-68330998 None:intergenic 35.0%
AATAGCTTGGTCACTATGTA+GGG + Chr4:68331415-68331434 MsG0480022106.01.T01:intron 35.0%
AATATCCATCAGTTACACAG+TGG - Chr4:68334351-68334370 None:intergenic 35.0%
AATGCAGAGTAGATTCTTTC+TGG - Chr4:68330560-68330579 None:intergenic 35.0%
ACAGTAATATGTAACTGCAG+TGG + Chr4:68333838-68333857 MsG0480022106.01.T01:intron 35.0%
AGACAATGCCAAAAACTACT+TGG - Chr4:68333688-68333707 None:intergenic 35.0%
AGCTGATTATAACATCCAGA+AGG + Chr4:68330087-68330106 MsG0480022106.01.T01:CDS 35.0%
AGGATAAGTTTGTAGAGAGT+TGG + Chr4:68331932-68331951 MsG0480022106.01.T01:intron 35.0%
ATGTGATGAAGAATGTCATC+AGG - Chr4:68334511-68334530 None:intergenic 35.0%
CAATCTAAGCACCAAATGAA+GGG - Chr4:68330119-68330138 None:intergenic 35.0%
CACCAATAGACTAATTCAAG+TGG + Chr4:68333017-68333036 MsG0480022106.01.T01:intron 35.0%
CATCTAATTAATCTGGGTCT+TGG - Chr4:68333164-68333183 None:intergenic 35.0%
CTGGATGTTATAATCAGCTA+GGG - Chr4:68330086-68330105 None:intergenic 35.0%
GAAACTTGTCATGGTTTATC+TGG + Chr4:68333534-68333553 MsG0480022106.01.T01:intron 35.0%
GAAAGCTAAGATTCAGGATA+AGG + Chr4:68330224-68330243 MsG0480022106.01.T01:CDS 35.0%
GAACTTCCATATTAGCAAGA+AGG + Chr4:68334563-68334582 MsG0480022106.01.T01:CDS 35.0%
GAATTAGAAACTAAAGGGAC+TGG - Chr4:68330916-68330935 None:intergenic 35.0%
GACCACTCATTACAATTTCA+AGG - Chr4:68331501-68331520 None:intergenic 35.0%
GACTGGAAAGACTATTACTT+TGG + Chr4:68330170-68330189 MsG0480022106.01.T01:intron 35.0%
GATGACGCAATTTATTTGGA+TGG - Chr4:68332199-68332218 None:intergenic 35.0%
GTCCTTGAAATTGTAATGAG+TGG + Chr4:68331496-68331515 MsG0480022106.01.T01:intron 35.0%
TAACGTGAAAGCTAAGATTC+AGG + Chr4:68330218-68330237 MsG0480022106.01.T01:CDS 35.0%
TACTACTTAAGAGGTCTAGT+AGG + Chr4:68334662-68334681 MsG0480022106.01.T01:CDS 35.0%
TCAATCTAAGCACCAAATGA+AGG - Chr4:68330120-68330139 None:intergenic 35.0%
TCTGGATGTTATAATCAGCT+AGG - Chr4:68330087-68330106 None:intergenic 35.0%
TCTTTGCGTAATAGTCACTT+TGG - Chr4:68331820-68331839 None:intergenic 35.0%
TGATACAATTGACAACGTGA+AGG + Chr4:68330434-68330453 MsG0480022106.01.T01:CDS 35.0%
TGCTAATATGGAAGTTCCTA+TGG - Chr4:68334560-68334579 None:intergenic 35.0%
TGGAAAGACAATAACTTTGG+AGG + Chr4:68330401-68330420 MsG0480022106.01.T01:CDS 35.0%
TGGAAAGACTATTACTTTGG+AGG + Chr4:68330173-68330192 MsG0480022106.01.T01:intron 35.0%
TGGTCAAAATAGTCCTTCAA+TGG + Chr4:68331516-68331535 MsG0480022106.01.T01:intron 35.0%
TTCAACTGAACTGAAGAAGA+GGG - Chr4:68333268-68333287 None:intergenic 35.0%
TTCCATATTAGCAAGAAGGT+GGG + Chr4:68334567-68334586 MsG0480022106.01.T01:CDS 35.0%
TTGAAGAGCTGAATATTTCC+TGG + Chr4:68334782-68334801 MsG0480022106.01.T01:CDS 35.0%
! AGATCAAAGAGTTGATTGGT+TGG - Chr4:68334634-68334653 None:intergenic 35.0%
! CAAGGCTTTTTATCACCTAA+AGG - Chr4:68334221-68334240 None:intergenic 35.0%
! GATTTTGTGAAGACTTTGAC+TGG + Chr4:68330153-68330172 MsG0480022106.01.T01:intron 35.0%
! TTTTATCACCTAAAGGGCAA+TGG - Chr4:68334214-68334233 None:intergenic 35.0%
!! CTTAGCTTTAACGTTGTCTA+TGG - Chr4:68329987-68330006 None:intergenic 35.0%
!! GAGTTATTGTGAGCATTGAA+AGG + Chr4:68331705-68331724 MsG0480022106.01.T01:intron 35.0%
!! TGACCTGTTGTTTCAAAACA+CGG - Chr4:68333973-68333992 None:intergenic 35.0%
!! TTGCTTTCTGAAACTTGTCA+TGG + Chr4:68333525-68333544 MsG0480022106.01.T01:intron 35.0%
!!! CGATTCTTCGGTGTTAATTT+TGG - Chr4:68332947-68332966 None:intergenic 35.0%
!!! CTACTCTGCATTTAGTTTTG+AGG + Chr4:68330568-68330587 MsG0480022106.01.T01:CDS 35.0%
!!! CTCACTCTGTCTACTTTTTA+TGG + Chr4:68334003-68334022 MsG0480022106.01.T01:intron 35.0%
!!! TTCTTCGGTGTTAATTTTGG+TGG - Chr4:68332944-68332963 None:intergenic 35.0%
AAAATAAGCCTTTGCTGGTC+TGG - Chr4:68330717-68330736 None:intergenic 40.0%
AAACCGAGACCTTGAATTGA+GGG + Chr4:68332967-68332986 MsG0480022106.01.T01:intron 40.0%
AAGATAAGCCTTTGCTGATC+AGG - Chr4:68330034-68330053 None:intergenic 40.0%
AAGATAAGTCTCTGCTGATC+AGG - Chr4:68330261-68330280 None:intergenic 40.0%
AGCAAAGGCTTATCTTTGCA+GGG + Chr4:68330038-68330057 MsG0480022106.01.T01:CDS 40.0%
AGTTTGTAGAGAGTTGGATC+AGG + Chr4:68331938-68331957 MsG0480022106.01.T01:intron 40.0%
CAACGTTAAAGCTAAGATCC+AGG + Chr4:68329991-68330010 MsG0480022106.01.T01:CDS 40.0%
CACTACCATGCATTGCAATA+CGG - Chr4:68334702-68334721 None:intergenic 40.0%
CAGCAAAAATAAGCCTTTGC+TGG - Chr4:68330722-68330741 None:intergenic 40.0%
CTTCAACTGAACTGAAGAAG+AGG - Chr4:68333269-68333288 None:intergenic 40.0%
CTTCCATATTAGCAAGAAGG+TGG + Chr4:68334566-68334585 MsG0480022106.01.T01:CDS 40.0%
GAAAGCGAAGATACAGGATA+AGG + Chr4:68330680-68330699 MsG0480022106.01.T01:CDS 40.0%
GCAAAGATTCAGGACAAAGA+GGG + Chr4:68330456-68330475 MsG0480022106.01.T01:CDS 40.0%
GCAAAGCAAAGAATTGAAGC+TGG - Chr4:68333337-68333356 None:intergenic 40.0%
GCTAAGATTCAGGATAAGGA+AGG + Chr4:68330228-68330247 MsG0480022106.01.T01:CDS 40.0%
GGAAACAACTAGAAGATGGA+AGG + Chr4:68330059-68330078 MsG0480022106.01.T01:CDS 40.0%
GGCGTGTTAGATTATGACTA+AGG - Chr4:68332178-68332197 None:intergenic 40.0%
GGTATAGTTCGCATGTTATC+TGG + Chr4:68333802-68333821 MsG0480022106.01.T01:intron 40.0%
GTAATATGTAACTGCAGTGG+CGG + Chr4:68333841-68333860 MsG0480022106.01.T01:intron 40.0%
GTACAGTACAACAGTTTGCA+AGG - Chr4:68334239-68334258 None:intergenic 40.0%
GTTTGTAGAGAGTTGGATCA+GGG + Chr4:68331939-68331958 MsG0480022106.01.T01:intron 40.0%
TAACGTGAAAGCGAAGATAC+AGG + Chr4:68330674-68330693 MsG0480022106.01.T01:CDS 40.0%
TACTGGGAAGACTATTACCT+TGG + Chr4:68330626-68330645 MsG0480022106.01.T01:CDS 40.0%
TGCAGTGGTTGCCTAATAAA+TGG + Chr4:68330875-68330894 MsG0480022106.01.T01:intron 40.0%
TGCCGATGACGCAATTTATT+TGG - Chr4:68332203-68332222 None:intergenic 40.0%
TTTGTAGAGAGTTGGATCAG+GGG + Chr4:68331940-68331959 MsG0480022106.01.T01:intron 40.0%
! AAAGGAATCGACTCTCCATT+TGG + Chr4:68330332-68330351 MsG0480022106.01.T01:CDS 40.0%
! AATTTTCGCAGGAAAGCAGT+TGG + Chr4:68330503-68330522 MsG0480022106.01.T01:CDS 40.0%
! TAAAAAGTACGTTCGAGTCC+TGG - Chr4:68334114-68334133 None:intergenic 40.0%
! TCTTTCGGCCAAGTAGTTTT+TGG + Chr4:68333677-68333696 MsG0480022106.01.T01:intron 40.0%
! TTCAAAGCTTTAGCCCCAAT+GGG - Chr4:68331451-68331470 None:intergenic 40.0%
! TTTTCTATATGCTGCAGAGC+TGG + Chr4:68334753-68334772 MsG0480022106.01.T01:CDS 40.0%
!! AACAGAGGTGCTAGAGTATT+TGG + Chr4:68332094-68332113 MsG0480022106.01.T01:intron 40.0%
!! ATGTCAGGAGGAGTTTGTTA+GGG + Chr4:68331851-68331870 MsG0480022106.01.T01:intron 40.0%
!! CATTTGGTGCTTAGATTGAG+AGG + Chr4:68330121-68330140 MsG0480022106.01.T01:intron 40.0%
!! TAGTCTATTGGTGTTGGCTT+GGG - Chr4:68333010-68333029 None:intergenic 40.0%
!! TATTTTTGCTGGCAAGCAGT+TGG + Chr4:68330731-68330750 MsG0480022106.01.T01:CDS 40.0%
!! TTAGTCTATTGGTGTTGGCT+TGG - Chr4:68333011-68333030 None:intergenic 40.0%
!!! ATTTGGTTTTGAGGCTTCGT+GGG + Chr4:68330349-68330368 MsG0480022106.01.T01:CDS 40.0%
!!! CAGCAAAGGCTTATTTTTGC+TGG + Chr4:68330720-68330739 MsG0480022106.01.T01:CDS 40.0%
!!! CATTTAGTTTTGAGGCTTCG+TGG + Chr4:68330576-68330595 MsG0480022106.01.T01:CDS 40.0%
!!! TGACCGTGTTTTGAAACAAC+AGG + Chr4:68333967-68333986 MsG0480022106.01.T01:intron 40.0%
AACCGAGACCTTGAATTGAG+GGG + Chr4:68332968-68332987 MsG0480022106.01.T01:intron 45.0%
AATGACCGGAGAATCAGAAC+CGG + Chr4:68332012-68332031 MsG0480022106.01.T01:intron 45.0%
AGCGAAGATACAGGATAAGG+AGG + Chr4:68330683-68330702 MsG0480022106.01.T01:CDS 45.0%
AGCTAAGATCCAGGACAAAG+AGG + Chr4:68330000-68330019 MsG0480022106.01.T01:CDS 45.0%
AGGTCTCGGTTTCGATTCTT+CGG - Chr4:68332959-68332978 None:intergenic 45.0%
AGTTGGATCAGGGGAGTAAA+AGG + Chr4:68331949-68331968 MsG0480022106.01.T01:intron 45.0%
ATAAGCCTTTGCTGATCAGG+AGG - Chr4:68330031-68330050 None:intergenic 45.0%
ATAAGTCTCTGCTGATCAGG+AGG - Chr4:68330258-68330277 None:intergenic 45.0%
ATCCATCAGTTACACAGTGG+CGG - Chr4:68334348-68334367 None:intergenic 45.0%
CAAAACTATCACCCTTGAGG+TGG + Chr4:68329949-68329968 MsG0480022106.01.T01:CDS 45.0%
CAACGTGAAGGCAAAGATTC+AGG + Chr4:68330446-68330465 MsG0480022106.01.T01:CDS 45.0%
CACGAAGCCTCAAAACCAAA+TGG - Chr4:68330350-68330369 None:intergenic 45.0%
CAGCAAAGGCTTATCTTTGC+AGG + Chr4:68330037-68330056 MsG0480022106.01.T01:CDS 45.0%
CAGCAGAGACTTATCTTTGC+AGG + Chr4:68330264-68330283 MsG0480022106.01.T01:CDS 45.0%
CGTATTGCAATGCATGGTAG+TGG + Chr4:68334700-68334719 MsG0480022106.01.T01:CDS 45.0%
CTCAGGAGTGACTAAATGAC+CGG + Chr4:68331998-68332017 MsG0480022106.01.T01:intron 45.0%
CTCCCACCTTCTTGCTAATA+TGG - Chr4:68334572-68334591 None:intergenic 45.0%
GAAACCGAGACCTTGAATTG+AGG + Chr4:68332966-68332985 MsG0480022106.01.T01:intron 45.0%
GAAGACTATTACCTTGGAGG+TGG + Chr4:68330632-68330651 MsG0480022106.01.T01:CDS 45.0%
GAAGGAATCCACCCTTCATT+TGG + Chr4:68330105-68330124 MsG0480022106.01.T01:CDS 45.0%
GACAAACTTAGTAGCCACCA+CGG - Chr4:68330824-68330843 None:intergenic 45.0%
GCAGGGAAACAACTAGAAGA+TGG + Chr4:68330055-68330074 MsG0480022106.01.T01:CDS 45.0%
GCGAAGATACAGGATAAGGA+GGG + Chr4:68330684-68330703 MsG0480022106.01.T01:CDS 45.0%
GCTAAGATCCAGGACAAAGA+GGG + Chr4:68330001-68330020 MsG0480022106.01.T01:CDS 45.0%
GGAAGTTCCTATGGCATCTT+TGG - Chr4:68334551-68334570 None:intergenic 45.0%
GGCAAAGATTCAGGACAAAG+AGG + Chr4:68330455-68330474 MsG0480022106.01.T01:CDS 45.0%
GGTCTAGTAGGACTGCAATT+AGG + Chr4:68334674-68334693 MsG0480022106.01.T01:CDS 45.0%
GTAAGCAGCTTGAAGATGGA+AGG + Chr4:68330286-68330305 MsG0480022106.01.T01:CDS 45.0%
TAAGCCTTTGCTGATCAGGA+GGG - Chr4:68330030-68330049 None:intergenic 45.0%
TAAGTCTCTGCTGATCAGGA+GGG - Chr4:68330257-68330276 None:intergenic 45.0%
TCTAAGCACCAAATGAAGGG+TGG - Chr4:68330116-68330135 None:intergenic 45.0%
TCTTTGCTTTGCATTTGCGG+CGG + Chr4:68333345-68333364 MsG0480022106.01.T01:intron 45.0%
TGGCAAAACTATCACCCTTG+AGG + Chr4:68329946-68329965 MsG0480022106.01.T01:CDS 45.0%
TGGGAAGACTATTACCTTGG+AGG + Chr4:68330629-68330648 MsG0480022106.01.T01:CDS 45.0%
TGTATCTCGGTTACTTGCAG+TGG + Chr4:68330860-68330879 MsG0480022106.01.T01:intron 45.0%
TTCCTATGGCATCTTTGGCA+GGG - Chr4:68334546-68334565 None:intergenic 45.0%
! AAAATTAGCCTCTGCTGGTC+TGG - Chr4:68330489-68330508 None:intergenic 45.0%
! AATGAAGGGTGGATTCCTTC+TGG - Chr4:68330105-68330124 None:intergenic 45.0%
! CTTCAAAGCTTTAGCCCCAA+TGG - Chr4:68331452-68331471 None:intergenic 45.0%
! GATGTCAGGAGGAGTTTGTT+AGG + Chr4:68331850-68331869 MsG0480022106.01.T01:intron 45.0%
! TTGGTGCTTAGATTGAGAGG+TGG + Chr4:68330124-68330143 MsG0480022106.01.T01:intron 45.0%
!! AGAACCTGGCTTTGAAACAG+AGG + Chr4:68332079-68332098 MsG0480022106.01.T01:intron 45.0%
!! CTTTTCCGGTTCTGATTCTC+CGG - Chr4:68332020-68332039 None:intergenic 45.0%
!!! CATTTGGTTTTGAGGCTTCG+TGG + Chr4:68330348-68330367 MsG0480022106.01.T01:CDS 45.0%
!!! CGACTCTCCATTTGGTTTTG+AGG + Chr4:68330340-68330359 MsG0480022106.01.T01:CDS 45.0%
!!! TTAGTTTTGAGGCTTCGTGG+TGG + Chr4:68330579-68330598 MsG0480022106.01.T01:CDS 45.0%
!!! TTTGGTTTTGAGGCTTCGTG+GGG + Chr4:68330350-68330369 MsG0480022106.01.T01:CDS 45.0%
!! ATATATATATATAACTTTAT+AGG - Chr4:68332819-68332838 None:intergenic 5.0%
AAACTTAGTAGCCACCACGG+AGG - Chr4:68330821-68330840 None:intergenic 50.0%
AAGCTGTGAATGAGCAACGC+AGG - Chr4:68333309-68333328 None:intergenic 50.0%
ACCGAGACCTTGAATTGAGG+GGG + Chr4:68332969-68332988 MsG0480022106.01.T01:intron 50.0%
AGCACCTCTGTTTCAAAGCC+AGG - Chr4:68332086-68332105 None:intergenic 50.0%
AGGCTCCGTATTGCAATGCA+TGG + Chr4:68334694-68334713 MsG0480022106.01.T01:CDS 50.0%
ATCAGAGCTTTCCACCTCCA+AGG - Chr4:68330646-68330665 None:intergenic 50.0%
ATCCGCCACTGTGTAACTGA+TGG + Chr4:68334343-68334362 MsG0480022106.01.T01:intron 50.0%
ATCGGAACTCTCCACCTCAA+GGG - Chr4:68329963-68329982 None:intergenic 50.0%
ATCTTTGCGGGCAAGAAGCT+TGG + Chr4:68333744-68333763 MsG0480022106.01.T01:intron 50.0%
CAAGAAGGTGGGAGTCTTTG+TGG + Chr4:68334578-68334597 MsG0480022106.01.T01:CDS 50.0%
CATCACATGAACGAGCAAGC+AGG + Chr4:68333377-68333396 MsG0480022106.01.T01:intron 50.0%
GACTCGAACCATTGCCCTTT+AGG + Chr4:68334203-68334222 MsG0480022106.01.T01:intron 50.0%
GAGGCGAAGAACAAGATGCA+GGG - Chr4:68330802-68330821 None:intergenic 50.0%
GCAGGAAAGCAGTTGGAAGA+TGG + Chr4:68330510-68330529 MsG0480022106.01.T01:CDS 50.0%
GCAGGTAAGCAGCTTGAAGA+TGG + Chr4:68330282-68330301 MsG0480022106.01.T01:CDS 50.0%
GGATCTTCTCAAGAGCCCAT+GGG + Chr4:68333862-68333881 MsG0480022106.01.T01:intron 50.0%
GTATCCCTCCTGATCAGCAA+AGG + Chr4:68330023-68330042 MsG0480022106.01.T01:CDS 50.0%
GTATTCCACCAGACCAGCAA+AGG + Chr4:68330706-68330725 MsG0480022106.01.T01:CDS 50.0%
GTTCCTATGGCATCTTTGGC+AGG - Chr4:68334547-68334566 None:intergenic 50.0%
GTTGGAAGATGGCCGTACTT+TGG + Chr4:68330521-68330540 MsG0480022106.01.T01:CDS 50.0%
GTTGGAGGATGGTCGTACTT+TGG + Chr4:68330749-68330768 MsG0480022106.01.T01:CDS 50.0%
TATCGGAACTCTCCACCTCA+AGG - Chr4:68329964-68329983 None:intergenic 50.0%
TCCCCCTCAATTCAAGGTCT+CGG - Chr4:68332973-68332992 None:intergenic 50.0%
! ATAAGCCTTTGCTGGTCTGG+TGG - Chr4:68330714-68330733 None:intergenic 50.0%
! CAGCAGAGGCTAATTTTCGC+AGG + Chr4:68330492-68330511 MsG0480022106.01.T01:CDS 50.0%
! CTGCGAAAATTAGCCTCTGC+TGG - Chr4:68330494-68330513 None:intergenic 50.0%
! GCACTGATATGGCTGGTACA+GGG + Chr4:68334434-68334453 MsG0480022106.01.T01:CDS 50.0%
! TTTTGCTGGCAAGCAGTTGG+AGG + Chr4:68330734-68330753 MsG0480022106.01.T01:CDS 50.0%
!! AGCACTGATATGGCTGGTAC+AGG + Chr4:68334433-68334452 MsG0480022106.01.T01:CDS 50.0%
!! AGGAGGAGTTTGTTAGGGTG+TGG + Chr4:68331856-68331875 MsG0480022106.01.T01:intron 50.0%
!! TGGGTTAGGCAGCACTGATA+TGG + Chr4:68334423-68334442 MsG0480022106.01.T01:intron 50.0%
!! TTAGGCAGCACTGATATGGC+TGG + Chr4:68334427-68334446 MsG0480022106.01.T01:intron 50.0%
!!! TTGGTTTTGAGGCTTCGTGG+GGG + Chr4:68330351-68330370 MsG0480022106.01.T01:CDS 50.0%
AGTAAATCTGGGGGGAGCCA+TGG - Chr4:68333890-68333909 None:intergenic 55.0%
CATCTTGTTCTTCGCCTCCG+TGG + Chr4:68330804-68330823 MsG0480022106.01.T01:CDS 55.0%
CGGATCTTCTCAAGAGCCCA+TGG + Chr4:68333861-68333880 MsG0480022106.01.T01:intron 55.0%
CTCCCTGCCAAAGATGCCAT+AGG + Chr4:68334541-68334560 MsG0480022106.01.T01:CDS 55.0%
GAGGGATACCCTCTTTGTCC+TGG - Chr4:68330012-68330031 None:intergenic 55.0%
GGAGGCGAAGAACAAGATGC+AGG - Chr4:68330803-68330822 None:intergenic 55.0%
GGTCACTATGTAGGGAGACC+TGG + Chr4:68331423-68331442 MsG0480022106.01.T01:intron 55.0%
GTGTGCTCCCCCTCAATTCA+AGG - Chr4:68332979-68332998 None:intergenic 55.0%
TTGCTTTGCATTTGCGGCGG+TGG + Chr4:68333348-68333367 MsG0480022106.01.T01:intron 55.0%
! ATTAGCCTCTGCTGGTCTGG+AGG - Chr4:68330486-68330505 None:intergenic 55.0%
! GTATTTCGCAAGCGTCGCAG+TGG + Chr4:68333940-68333959 MsG0480022106.01.T01:intron 55.0%
AGGGAGACCTGGCACCCATT+GGG + Chr4:68331434-68331453 MsG0480022106.01.T01:intron 60.0%
CTTGTTCTTCGCCTCCGTGG+TGG + Chr4:68330807-68330826 MsG0480022106.01.T01:intron 60.0%
CTTTAGCCCCAATGGGTGCC+AGG - Chr4:68331444-68331463 None:intergenic 60.0%
CTTTGCATTTGCGGCGGTGG+TGG + Chr4:68333351-68333370 MsG0480022106.01.T01:intron 60.0%
GCATTCCTCCAGACCAGCAG+AGG + Chr4:68330478-68330497 MsG0480022106.01.T01:CDS 60.0%
GCTGGCAAGCAGTTGGAGGA+TGG + Chr4:68330738-68330757 MsG0480022106.01.T01:CDS 60.0%
TAGGGAGACCTGGCACCCAT+TGG + Chr4:68331433-68331452 MsG0480022106.01.T01:intron 60.0%
TCAAGAGCCCATGGGAGCCA+TGG + Chr4:68333870-68333889 MsG0480022106.01.T01:intron 60.0%
GGGAGACCTGGCACCCATTG+GGG + Chr4:68331435-68331454 MsG0480022106.01.T01:intron 65.0%
GGGGGAGCCATGGCTCCCAT+GGG - Chr4:68333880-68333899 None:intergenic 70.0%
GGGGGGAGCCATGGCTCCCA+TGG - Chr4:68333881-68333900 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr4 gene 68329923 68334810 68329923 ID=MsG0480022106.01;Name=MsG0480022106.01
Chr4 mRNA 68329923 68334810 68329923 ID=MsG0480022106.01.T01;Parent=MsG0480022106.01;Name=MsG0480022106.01.T01;_AED=0.49;_eAED=0.54;_QI=0|0|0|1|1|0.66|3|0|404
Chr4 exon 68329923 68330126 68329923 ID=MsG0480022106.01.T01:exon:4929;Parent=MsG0480022106.01.T01
Chr4 exon 68330195 68330825 68330195 ID=MsG0480022106.01.T01:exon:4930;Parent=MsG0480022106.01.T01
Chr4 exon 68334431 68334810 68334431 ID=MsG0480022106.01.T01:exon:4931;Parent=MsG0480022106.01.T01
Chr4 CDS 68329923 68330126 68329923 ID=MsG0480022106.01.T01:cds;Parent=MsG0480022106.01.T01
Chr4 CDS 68330195 68330825 68330195 ID=MsG0480022106.01.T01:cds;Parent=MsG0480022106.01.T01
Chr4 CDS 68334431 68334810 68334431 ID=MsG0480022106.01.T01:cds;Parent=MsG0480022106.01.T01
Gene Sequence

>MsG0480022106.01.T01

GCAATCTTTGTGAAAACATTGACTGGCAAAACTATCACCCTTGAGGTGGAGAGTTCCGATACCATAGACAACGTTAAAGCTAAGATCCAGGACAAAGAGGGTATCCCTCCTGATCAGCAAAGGCTTATCTTTGCAGGGAAACAACTAGAAGATGGAAGGACCCTAGCTGATTATAACATCCAGAAGGAATCCACCCTTCATTTGGTTGAGAGTTCAGATACTATTGATAACGTGAAAGCTAAGATTCAGGATAAGGAAGGCATCCCTCCTGATCAGCAGAGACTTATCTTTGCAGGTAAGCAGCTTGAAGATGGAAGGACCCTAGCAGATTATAACATTCAAAAGGAATCGACTCTCCATTTGGTTTTGAGGCTTCGTGGGGGTATGCAGATTTTTGTGAAGACTCTTACTGGAAAGACAATAACTTTGGAGGTTGAAAGTTCTGATACAATTGACAACGTGAAGGCAAAGATTCAGGACAAAGAGGGCATTCCTCCAGACCAGCAGAGGCTAATTTTCGCAGGAAAGCAGTTGGAAGATGGCCGTACTTTGGCTGATTATAATATCCAGAAAGAATCTACTCTGCATTTAGTTTTGAGGCTTCGTGGTGGCATGCAAATATTTGTGAAGACACTTACTGGGAAGACTATTACCTTGGAGGTGGAAAGCTCTGATACGATTGATAACGTGAAAGCGAAGATACAGGATAAGGAGGGTATTCCACCAGACCAGCAAAGGCTTATTTTTGCTGGCAAGCAGTTGGAGGATGGTCGTACTTTGGCAGATTACAATATTCAGAAAGAATCTACCCTGCATCTTGTTCTTCGCCTCCGTGGCAGCACTGATATGGCTGGTACAGGGACAATAAAAATATATAATGTAGGCGACAGAAAAGATTTCATCAGCAATTTACCTGATGACATTCTTCATCACATTCTTTCGTTACTCCCTGCCAAAGATGCCATAGGAACTTCCATATTAGCAAGAAGGTGGGAGTCTTTGTGGATCGACTTATCTGCATTTAATTTTGACAGGCCAACCAATCAACTCTTTGATCTAGTTCACATACTACTTAAGAGGTCTAGTAGGACTGCAATTAGGCTCCGTATTGCAATGCATGGTAGTGGAGTTACTGTTGATCGAGCCAAATTACAATGTTTTCTATATGCTGCAGAGCTGGACAAAGTTGAAGAGCTGAATATTTCCTGGATTTAA

Protein sequence

>MsG0480022106.01.T01

AIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGSTDMAGTGTIKIYNVGDRKDFISNLPDDILHHILSLLPAKDAIGTSILARRWESLWIDLSAFNFDRPTNQLFDLVHILLKRSSRTAIRLRIAMHGSGVTVDRAKLQCFLYAAELDKVEELNISWI*