AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880042792.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880042792.01.T01 MTR_8g022290 96.053 152 6 0 130 281 193 344 7.34e-99 295
MsG0880042792.01.T01 MTR_8g022290 92.941 85 2 2 1 84 1 82 6.51e-28 111
MsG0880042792.01.T01 MTR_2g016140 52.000 75 33 1 200 274 236 307 2.27e-18 84.3
MsG0880042792.01.T01 MTR_2g016140 52.000 75 33 1 200 274 236 307 3.79e-18 84.0
MsG0880042792.01.T01 MTR_4g079960 56.250 64 28 0 212 275 233 296 1.84e-17 81.6
MsG0880042792.01.T01 MTR_4g079960 56.250 64 28 0 212 275 233 296 2.36e-17 81.3
MsG0880042792.01.T01 MTR_4g079960 56.250 64 28 0 212 275 233 296 2.53e-17 81.3
MsG0880042792.01.T01 MTR_2g102227 28.205 234 121 9 70 271 274 492 3.41e-12 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880042792.01.T01 AT3G14180 57.252 131 51 4 163 290 297 425 7.46e-34 129
MsG0880042792.01.T01 AT3G14180 49.333 75 14 2 34 84 24 98 7.62e-12 66.2
MsG0880042792.01.T01 AT3G11100 49.398 83 39 1 194 276 163 242 2.25e-17 80.5
MsG0880042792.01.T01 AT1G54060 40.132 152 68 4 161 294 237 383 1.18e-15 77.0
MsG0880042792.01.T01 AT5G05550 45.455 77 41 1 210 286 173 248 4.00e-15 73.9
MsG0880042792.01.T01 AT5G05550 50.000 66 33 0 210 275 173 238 2.93e-14 71.6
MsG0880042792.01.T01 AT5G05550 50.000 66 33 0 210 275 173 238 2.95e-14 71.6
MsG0880042792.01.T01 AT3G58630 45.763 59 32 0 213 271 236 294 3.37e-12 66.6
MsG0880042792.01.T01 AT3G58630 45.763 59 32 0 213 271 236 294 4.67e-12 66.2

Find 86 sgRNAs with CRISPR-Local

Find 106 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTCAGGCAATTGTGAAATT+TGG 0.238839 8:-14115322 MsG0880042792.01.T01:CDS
GATGAAGTTTGCTAAGGATT+TGG 0.272524 8:-14115236 MsG0880042792.01.T01:CDS
CACTGTCACTGTTATTGTTA+TGG 0.294667 8:+14115068 None:intergenic
TTCGGTGACGGTTGCGGCAC+CGG 0.338241 8:-14116055 MsG0880042792.01.T01:CDS
TCCATCTCCGGTGTCGTCTC+CGG 0.352746 8:-14116094 MsG0880042792.01.T01:CDS
TCTGTTGGTATTCGCGCCTC+TGG 0.373847 8:-14115586 MsG0880042792.01.T01:CDS
AAATTCGAAGGGGAGAGGTT+GGG 0.373866 8:-14115365 MsG0880042792.01.T01:CDS
GTGGAGGGAGGGAGGATTGT+TGG 0.405449 8:-14115975 MsG0880042792.01.T01:CDS
CCATCTCCGGTGTCGTCTCC+GGG 0.410853 8:-14116093 MsG0880042792.01.T01:CDS
AATTCGAAGGGGAGAGGTTG+GGG 0.424508 8:-14115364 MsG0880042792.01.T01:CDS
GGGAGCGATCGGTAGGATTT+CGG 0.429065 8:-14116073 MsG0880042792.01.T01:CDS
ATCGGTGCTGGAGGTGGCTC+CGG 0.432598 8:-14115747 MsG0880042792.01.T01:CDS
GAGATTTCACAGTTGAAACT+TGG 0.444571 8:-14115175 MsG0880042792.01.T01:CDS
GGCGGTGTTGATTGAAGCGT+GGG 0.449332 8:-14115938 MsG0880042792.01.T01:CDS
AATGCATAGCTGTTCGCCGC+CGG 0.453869 8:+14116036 None:intergenic
GAGGTTGGGGAAGTGCGGTG+AGG 0.461820 8:-14115351 MsG0880042792.01.T01:CDS
AGGTTGGGGAAGTGCGGTGA+GGG 0.465619 8:-14115350 MsG0880042792.01.T01:CDS
ATCATAAAACCGCCAAGTGC+TGG 0.468333 8:+14115713 None:intergenic
TAGGATTTCGGTGACGGTTG+CGG 0.476805 8:-14116061 MsG0880042792.01.T01:CDS
GTCGAAGTTGCAGCAGGTGG+TGG 0.476922 8:-14115275 MsG0880042792.01.T01:CDS
CAAATTCGAAGGGGAGAGGT+TGG 0.478124 8:-14115366 MsG0880042792.01.T01:CDS
CTGATATTCAGTGTAAGAAT+CGG 0.489039 8:-14115812 MsG0880042792.01.T01:intron
GGCGAGTGGTTCTCCATCTC+CGG 0.489845 8:-14116106 MsG0880042792.01.T01:CDS
GGTTAAGAAGAAGTATAAAT+CGG 0.490848 8:-14115781 MsG0880042792.01.T01:CDS
GCTCTCTTCCTCTCCGGTGG+TGG 0.494319 8:+14115403 None:intergenic
GTTGCAGCAGGTGGTGGAGA+TGG 0.496264 8:-14115269 MsG0880042792.01.T01:CDS
GAGAAAGCTAAGATCGGTGC+TGG 0.500736 8:-14115759 MsG0880042792.01.T01:CDS
CCACGTGTCGTATTCTGAAT+CGG 0.509196 8:+14116006 None:intergenic
GCTAAGATCGGTGCTGGAGG+TGG 0.509682 8:-14115753 MsG0880042792.01.T01:CDS
ACTTTCGCTCTCTTCCTCTC+CGG 0.511815 8:+14115397 None:intergenic
TGGAAGCAACGGTGGAGGGA+GGG 0.519025 8:-14115986 MsG0880042792.01.T01:CDS
GTGTCGTCTCCGGGAGCGAT+CGG 0.520173 8:-14116084 MsG0880042792.01.T01:CDS
GATCGGTAGGATTTCGGTGA+CGG 0.523152 8:-14116067 MsG0880042792.01.T01:CDS
GGAGAACCACTCGCCGGAGA+TGG 0.523745 8:+14116114 None:intergenic
AGTGATGAATTCAAATTCGA+AGG 0.523808 8:-14115377 MsG0880042792.01.T01:CDS
AATTCAAATTCGAAGGGGAG+AGG 0.527517 8:-14115370 MsG0880042792.01.T01:CDS
CCCGGAGACGACACCGGAGA+TGG 0.529470 8:+14116093 None:intergenic
TCACAGCAGAAAGTTCCGTT+AGG 0.530119 8:-14115612 MsG0880042792.01.T01:intron
GCAGAGGATGAAGTTTGCTA+AGG 0.530659 8:-14115242 MsG0880042792.01.T01:CDS
GTGATGAATTCAAATTCGAA+GGG 0.535513 8:-14115376 MsG0880042792.01.T01:CDS
GAAATCCTACCGATCGCTCC+CGG 0.544759 8:+14116075 None:intergenic
GTGGAAGCAACGGTGGAGGG+AGG 0.547610 8:-14115987 MsG0880042792.01.T01:CDS
CACGTGGAAGCAACGGTGGA+GGG 0.548507 8:-14115990 MsG0880042792.01.T01:CDS
GTGTAAGAATCGGATTGATA+CGG 0.548630 8:-14115802 MsG0880042792.01.T01:CDS
TTCGCTCTCTTCCTCTCCGG+TGG 0.556083 8:+14115400 None:intergenic
AGATTTCACAGTTGAAACTT+GGG 0.558338 8:-14115174 MsG0880042792.01.T01:CDS
GGAGACGTCGAAGTTGCAGC+AGG 0.559673 8:-14115281 MsG0880042792.01.T01:CDS
TGCGGTGAGGGAATTGACTC+AGG 0.559802 8:-14115338 MsG0880042792.01.T01:CDS
AATACGACACGTGGAAGCAA+CGG 0.563694 8:-14115997 MsG0880042792.01.T01:CDS
TGGTGGAGATGGAGAAGCAG+AGG 0.566345 8:-14115258 MsG0880042792.01.T01:CDS
TGATTGAAGCGTGGGGAGAG+AGG 0.567107 8:-14115930 MsG0880042792.01.T01:intron
GGGGAGAGGTTGGGGAAGTG+CGG 0.570094 8:-14115356 MsG0880042792.01.T01:CDS
GTGTTACAACCAGCACTTGG+CGG 0.570584 8:-14115722 MsG0880042792.01.T01:CDS
CGGCGGTGTTGATTGAAGCG+TGG 0.570892 8:-14115939 MsG0880042792.01.T01:CDS
GACGTCGAAGTTGCAGCAGG+TGG 0.576057 8:-14115278 MsG0880042792.01.T01:CDS
ACACGTGGAAGCAACGGTGG+AGG 0.578608 8:-14115991 MsG0880042792.01.T01:CDS
AGTTCCGTTAGGAATTCTGT+TGG 0.581938 8:-14115601 MsG0880042792.01.T01:CDS
ATCGCTCCCGGAGACGACAC+CGG 0.585960 8:+14116087 None:intergenic
AGTGCTGGTTGTAACACCGC+CGG 0.591035 8:+14115728 None:intergenic
GCGGTGTTACAACCAGCACT+TGG 0.592137 8:-14115725 MsG0880042792.01.T01:CDS
TTGTTGGAGCGAAGCAGCGA+CGG 0.593492 8:-14115959 MsG0880042792.01.T01:CDS
AAGCGACAGTTTACCACCAC+CGG 0.595248 8:-14115416 MsG0880042792.01.T01:CDS
AAGCAACGGTGGAGGGAGGG+AGG 0.596019 8:-14115983 MsG0880042792.01.T01:CDS
GATCCACTCGAATCCATCTC+CGG 0.596077 8:-14116127 MsG0880042792.01.T01:CDS
CGTCTCCGGGAGCGATCGGT+AGG 0.601980 8:-14116080 MsG0880042792.01.T01:CDS
GGTGCTGGAGGTGGCTCCGG+CGG 0.604719 8:-14115744 MsG0880042792.01.T01:CDS
ATTCGCGCCTCTGGAGCTAG+AGG 0.614912 8:-14115577 MsG0880042792.01.T01:CDS
TGGTGAAGCTTATGAACAAG+CGG 0.615901 8:-14115302 MsG0880042792.01.T01:CDS
TCGAATCCATCTCCGGCGAG+TGG 0.616080 8:-14116120 MsG0880042792.01.T01:CDS
AAATCGGAGAAAGCTAAGAT+CGG 0.619321 8:-14115765 MsG0880042792.01.T01:CDS
GGTGACGGTTGCGGCACCGG+CGG 0.620431 8:-14116052 MsG0880042792.01.T01:CDS
TTGGAGCGAAGCAGCGACGG+CGG 0.631965 8:-14115956 MsG0880042792.01.T01:CDS
AAAGCTAAGATCGGTGCTGG+AGG 0.634146 8:-14115756 MsG0880042792.01.T01:CDS
GGAGATGGAGAACCACTCGC+CGG 0.634434 8:+14116108 None:intergenic
GGTAAACTGTCGCTTGACAC+CGG 0.634602 8:+14115424 None:intergenic
ATTCGCGCCTCTAGCTCCAG+AGG 0.645061 8:+14115570 None:intergenic
ACGACACGTGGAAGCAACGG+TGG 0.649070 8:-14115994 MsG0880042792.01.T01:CDS
CCGATTCAGAATACGACACG+TGG 0.663489 8:-14116006 MsG0880042792.01.T01:CDS
TCGCCGGAGATGGATTCGAG+TGG 0.676446 8:+14116124 None:intergenic
ACAGTTTACCACCACCGGAG+AGG 0.677094 8:-14115411 MsG0880042792.01.T01:CDS
TGATGAATTCAAATTCGAAG+GGG 0.682099 8:-14115375 MsG0880042792.01.T01:CDS
TGACGACGACGAGATCCACT+CGG 0.685256 8:-14116157 MsG0880042792.01.T01:CDS
GAATTCAGCTCAGAAACGCG+TGG 0.694751 8:+14115481 None:intergenic
AATACCAACAGAATTCCTAA+CGG 0.709945 8:+14115597 None:intergenic
GCGGTGTTGATTGAAGCGTG+GGG 0.735042 8:-14115937 MsG0880042792.01.T01:CDS
AGTGGATCGAGTTAACCGAG+TGG 0.771483 8:+14116142 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAGAAAAAGTGTAATGTTAA+TGG - Chr8:14116074-14116093 MsG0880042792.01.T01:CDS 20.0%
!! GGTTAAGAAGAAGTATAAAT+CGG - Chr8:14115444-14115463 MsG0880042792.01.T01:CDS 25.0%
AATACCAACAGAATTCCTAA+CGG + Chr8:14115631-14115650 None:intergenic 30.0%
AGATTTCACAGTTGAAACTT+GGG - Chr8:14116051-14116070 MsG0880042792.01.T01:CDS 30.0%
AGTGATGAATTCAAATTCGA+AGG - Chr8:14115848-14115867 MsG0880042792.01.T01:intron 30.0%
CTGATATTCAGTGTAAGAAT+CGG - Chr8:14115413-14115432 MsG0880042792.01.T01:CDS 30.0%
CTTACACTGAATATCAGTTT+CGG + Chr8:14115410-14115429 None:intergenic 30.0%
GTGATGAATTCAAATTCGAA+GGG - Chr8:14115849-14115868 MsG0880042792.01.T01:intron 30.0%
TGATGAATTCAAATTCGAAG+GGG - Chr8:14115850-14115869 MsG0880042792.01.T01:intron 30.0%
AAATCGGAGAAAGCTAAGAT+CGG - Chr8:14115460-14115479 MsG0880042792.01.T01:CDS 35.0%
ACTCAGGCAATTGTGAAATT+TGG - Chr8:14115903-14115922 MsG0880042792.01.T01:intron 35.0%
CACTGTCACTGTTATTGTTA+TGG + Chr8:14116160-14116179 None:intergenic 35.0%
GAGATTTCACAGTTGAAACT+TGG - Chr8:14116050-14116069 MsG0880042792.01.T01:CDS 35.0%
GATCGGTTAGATCAGTTAAT+TGG - Chr8:14115532-14115551 MsG0880042792.01.T01:CDS 35.0%
GTGTAAGAATCGGATTGATA+CGG - Chr8:14115423-14115442 MsG0880042792.01.T01:CDS 35.0%
! GCAGTTTTTCATGAAAACTC+AGG - Chr8:14116025-14116044 MsG0880042792.01.T01:CDS 35.0%
!! GATGAAGTTTGCTAAGGATT+TGG - Chr8:14115989-14116008 MsG0880042792.01.T01:CDS 35.0%
AATTCAAATTCGAAGGGGAG+AGG - Chr8:14115855-14115874 MsG0880042792.01.T01:intron 40.0%
AGTTCCGTTAGGAATTCTGT+TGG - Chr8:14115624-14115643 MsG0880042792.01.T01:intron 40.0%
ATGACTGTTTCCAGTATGAC+TGG + Chr8:14115590-14115609 None:intergenic 40.0%
TGGTGAAGCTTATGAACAAG+CGG - Chr8:14115923-14115942 MsG0880042792.01.T01:intron 40.0%
! AGGTATTTGGAATTGAGCAG+AGG - Chr8:14115315-14115334 MsG0880042792.01.T01:CDS 40.0%
! GCTATTGTTGTTGTTGTTGC+TGG + Chr8:14116135-14116154 None:intergenic 40.0%
! GGAATTTGAAGCAGAAGCAT+TGG - Chr8:14115336-14115355 MsG0880042792.01.T01:CDS 40.0%
!! TGAAAAAGAAGCGTTGTCAC+CGG - Chr8:14115782-14115801 MsG0880042792.01.T01:CDS 40.0%
AAATTCGAAGGGGAGAGGTT+GGG - Chr8:14115860-14115879 MsG0880042792.01.T01:intron 45.0%
AATACGACACGTGGAAGCAA+CGG - Chr8:14115228-14115247 MsG0880042792.01.T01:CDS 45.0%
ACCGGAAACACCACTAATCT+TGG + Chr8:14115566-14115585 None:intergenic 45.0%
ATCATAAAACCGCCAAGTGC+TGG + Chr8:14115515-14115534 None:intergenic 45.0%
CCACGTGTCGTATTCTGAAT+CGG + Chr8:14115222-14115241 None:intergenic 45.0%
GAGGTTGCAGAGATTGTGAA+TGG - Chr8:14115362-14115381 MsG0880042792.01.T01:CDS 45.0%
GCAGAGATTGTGAATGGAAG+AGG - Chr8:14115368-14115387 MsG0880042792.01.T01:CDS 45.0%
GCCAAGATTAGTGGTGTTTC+CGG - Chr8:14115562-14115581 MsG0880042792.01.T01:CDS 45.0%
GTTTCCAGTATGACTGGTAC+CGG + Chr8:14115584-14115603 None:intergenic 45.0%
TCACAGCAGAAAGTTCCGTT+AGG - Chr8:14115613-14115632 MsG0880042792.01.T01:intron 45.0%
!! GAAGCAGAAGCATTGGAAAG+AGG - Chr8:14115343-14115362 MsG0880042792.01.T01:CDS 45.0%
!! GCACTTGGCGGTTTTATGAT+CGG - Chr8:14115515-14115534 MsG0880042792.01.T01:CDS 45.0%
!! GCAGAGGATGAAGTTTGCTA+AGG - Chr8:14115983-14116002 MsG0880042792.01.T01:CDS 45.0%
AAGCGACAGTTTACCACCAC+CGG - Chr8:14115809-14115828 MsG0880042792.01.T01:intron 50.0%
AATTCGAAGGGGAGAGGTTG+GGG - Chr8:14115861-14115880 MsG0880042792.01.T01:intron 50.0%
ACACCACTAATCTTGGCAGC+TGG + Chr8:14115559-14115578 None:intergenic 50.0%
ACTTTCGCTCTCTTCCTCTC+CGG + Chr8:14115831-14115850 None:intergenic 50.0%
AGTGGATCGAGTTAACCGAG+TGG + Chr8:14115086-14115105 None:intergenic 50.0%
CAAATTCGAAGGGGAGAGGT+TGG - Chr8:14115859-14115878 MsG0880042792.01.T01:intron 50.0%
CCGATTCAGAATACGACACG+TGG - Chr8:14115219-14115238 MsG0880042792.01.T01:CDS 50.0%
GAATTCAGCTCAGAAACGCG+TGG + Chr8:14115747-14115766 None:intergenic 50.0%
GAGAAAGCTAAGATCGGTGC+TGG - Chr8:14115466-14115485 MsG0880042792.01.T01:CDS 50.0%
GATCCACTCGAATCCATCTC+CGG - Chr8:14115098-14115117 MsG0880042792.01.T01:CDS 50.0%
GATCGGTAGGATTTCGGTGA+CGG - Chr8:14115158-14115177 MsG0880042792.01.T01:CDS 50.0%
GTGTTACAACCAGCACTTGG+CGG - Chr8:14115503-14115522 MsG0880042792.01.T01:CDS 50.0%
GTTTCCGGTACCAGTCATAC+TGG - Chr8:14115577-14115596 MsG0880042792.01.T01:CDS 50.0%
! GGTAAACTGTCGCTTGACAC+CGG + Chr8:14115804-14115823 None:intergenic 50.0%
! TAGGATTTCGGTGACGGTTG+CGG - Chr8:14115164-14115183 MsG0880042792.01.T01:CDS 50.0%
!! AAAGCTAAGATCGGTGCTGG+AGG - Chr8:14115469-14115488 MsG0880042792.01.T01:CDS 50.0%
AATGCATAGCTGTTCGCCGC+CGG + Chr8:14115192-14115211 None:intergenic 55.0%
ACAGTTTACCACCACCGGAG+AGG - Chr8:14115814-14115833 MsG0880042792.01.T01:intron 55.0%
GAAATCCTACCGATCGCTCC+CGG + Chr8:14115153-14115172 None:intergenic 55.0%
GGGAGCGATCGGTAGGATTT+CGG - Chr8:14115152-14115171 MsG0880042792.01.T01:CDS 55.0%
GGTCCAGCTGCCAAGATTAG+TGG - Chr8:14115553-14115572 MsG0880042792.01.T01:CDS 55.0%
TCTGTTGGTATTCGCGCCTC+TGG - Chr8:14115639-14115658 MsG0880042792.01.T01:intron 55.0%
TGACGACGACGAGATCCACT+CGG - Chr8:14115068-14115087 MsG0880042792.01.T01:CDS 55.0%
TGATTGAAGCGTGGGGAGAG+AGG - Chr8:14115295-14115314 MsG0880042792.01.T01:CDS 55.0%
TGGTGGAGATGGAGAAGCAG+AGG - Chr8:14115967-14115986 MsG0880042792.01.T01:CDS 55.0%
TTGTTGGAGCGAAGCAGCGA+CGG - Chr8:14115266-14115285 MsG0880042792.01.T01:CDS 55.0%
! TGCGGTGAGGGAATTGACTC+AGG - Chr8:14115887-14115906 MsG0880042792.01.T01:intron 55.0%
!! AGCGTGGGGAGAGAGGTATT+TGG - Chr8:14115302-14115321 MsG0880042792.01.T01:CDS 55.0%
!! AGTGCTGGTTGTAACACCGC+CGG + Chr8:14115500-14115519 None:intergenic 55.0%
!! GCGGTGTTACAACCAGCACT+TGG - Chr8:14115500-14115519 MsG0880042792.01.T01:CDS 55.0%
!! GCGGTGTTGATTGAAGCGTG+GGG - Chr8:14115288-14115307 MsG0880042792.01.T01:CDS 55.0%
!! GGCGGTGTTGATTGAAGCGT+GGG - Chr8:14115287-14115306 MsG0880042792.01.T01:CDS 55.0%
ACACGTGGAAGCAACGGTGG+AGG - Chr8:14115234-14115253 MsG0880042792.01.T01:CDS 60.0%
ACGACACGTGGAAGCAACGG+TGG - Chr8:14115231-14115250 MsG0880042792.01.T01:CDS 60.0%
CACGTGGAAGCAACGGTGGA+GGG - Chr8:14115235-14115254 MsG0880042792.01.T01:CDS 60.0%
GACGTCGAAGTTGCAGCAGG+TGG - Chr8:14115947-14115966 MsG0880042792.01.T01:CDS 60.0%
GGAGACGTCGAAGTTGCAGC+AGG - Chr8:14115944-14115963 MsG0880042792.01.T01:CDS 60.0%
GGAGATGGAGAACCACTCGC+CGG + Chr8:14115120-14115139 None:intergenic 60.0%
GGCGAGTGGTTCTCCATCTC+CGG - Chr8:14115119-14115138 MsG0880042792.01.T01:CDS 60.0%
GTCGAAGTTGCAGCAGGTGG+TGG - Chr8:14115950-14115969 MsG0880042792.01.T01:CDS 60.0%
GTGGAGGGAGGGAGGATTGT+TGG - Chr8:14115250-14115269 MsG0880042792.01.T01:CDS 60.0%
TCGAATCCATCTCCGGCGAG+TGG - Chr8:14115105-14115124 MsG0880042792.01.T01:CDS 60.0%
TGGAAGCAACGGTGGAGGGA+GGG - Chr8:14115239-14115258 MsG0880042792.01.T01:CDS 60.0%
TTCGCTCTCTTCCTCTCCGG+TGG + Chr8:14115828-14115847 None:intergenic 60.0%
! AGGTTGGGGAAGTGCGGTGA+GGG - Chr8:14115875-14115894 MsG0880042792.01.T01:intron 60.0%
! ATTCGCGCCTCTAGCTCCAG+AGG + Chr8:14115658-14115677 None:intergenic 60.0%
! TCGCCGGAGATGGATTCGAG+TGG + Chr8:14115104-14115123 None:intergenic 60.0%
!! ATTCGCGCCTCTGGAGCTAG+AGG - Chr8:14115648-14115667 MsG0880042792.01.T01:intron 60.0%
!! CGGCGGTGTTGATTGAAGCG+TGG - Chr8:14115286-14115305 MsG0880042792.01.T01:CDS 60.0%
!! GCTAAGATCGGTGCTGGAGG+TGG - Chr8:14115472-14115491 MsG0880042792.01.T01:CDS 60.0%
!! GTTGCAGCAGGTGGTGGAGA+TGG - Chr8:14115956-14115975 MsG0880042792.01.T01:CDS 60.0%
!! TCCATCTCCGGTGTCGTCTC+CGG - Chr8:14115131-14115150 MsG0880042792.01.T01:CDS 60.0%
AAGCAACGGTGGAGGGAGGG+AGG - Chr8:14115242-14115261 MsG0880042792.01.T01:CDS 65.0%
ATCGCTCCCGGAGACGACAC+CGG + Chr8:14115141-14115160 None:intergenic 65.0%
GCTCTCTTCCTCTCCGGTGG+TGG + Chr8:14115825-14115844 None:intergenic 65.0%
GGAGAACCACTCGCCGGAGA+TGG + Chr8:14115114-14115133 None:intergenic 65.0%
GGGGAGAGGTTGGGGAAGTG+CGG - Chr8:14115869-14115888 MsG0880042792.01.T01:intron 65.0%
GTGGAAGCAACGGTGGAGGG+AGG - Chr8:14115238-14115257 MsG0880042792.01.T01:CDS 65.0%
GTGTCGTCTCCGGGAGCGAT+CGG - Chr8:14115141-14115160 MsG0880042792.01.T01:CDS 65.0%
TTGGAGCGAAGCAGCGACGG+CGG - Chr8:14115269-14115288 MsG0880042792.01.T01:CDS 65.0%
! GAGGTTGGGGAAGTGCGGTG+AGG - Chr8:14115874-14115893 MsG0880042792.01.T01:intron 65.0%
! TTCGGTGACGGTTGCGGCAC+CGG - Chr8:14115170-14115189 MsG0880042792.01.T01:CDS 65.0%
!! ATCGGTGCTGGAGGTGGCTC+CGG - Chr8:14115478-14115497 MsG0880042792.01.T01:CDS 65.0%
!! CCATCTCCGGTGTCGTCTCC+GGG - Chr8:14115132-14115151 MsG0880042792.01.T01:CDS 65.0%
CCCGGAGACGACACCGGAGA+TGG + Chr8:14115135-14115154 None:intergenic 70.0%
CGTCTCCGGGAGCGATCGGT+AGG - Chr8:14115145-14115164 MsG0880042792.01.T01:CDS 70.0%
! GGTGACGGTTGCGGCACCGG+CGG - Chr8:14115173-14115192 MsG0880042792.01.T01:CDS 75.0%
! GGTGCTGGAGGTGGCTCCGG+CGG - Chr8:14115481-14115500 MsG0880042792.01.T01:CDS 75.0%
Chromosome Type Strat End Strand Name
Chr8 gene 14115063 14116184 14115063 ID=MsG0880042792.01;Name=MsG0880042792.01
Chr8 mRNA 14115063 14116184 14115063 ID=MsG0880042792.01.T01;Parent=MsG0880042792.01;Name=MsG0880042792.01.T01;_AED=0.45;_eAED=0.52;_QI=0|0|0|1|1|0.66|3|0|309
Chr8 exon 14115931 14116184 14115931 ID=MsG0880042792.01.T01:exon:3817;Parent=MsG0880042792.01.T01
Chr8 exon 14115711 14115823 14115711 ID=MsG0880042792.01.T01:exon:3816;Parent=MsG0880042792.01.T01
Chr8 exon 14115063 14115625 14115063 ID=MsG0880042792.01.T01:exon:3815;Parent=MsG0880042792.01.T01
Chr8 CDS 14115931 14116184 14115931 ID=MsG0880042792.01.T01:cds;Parent=MsG0880042792.01.T01
Chr8 CDS 14115711 14115823 14115711 ID=MsG0880042792.01.T01:cds;Parent=MsG0880042792.01.T01
Chr8 CDS 14115063 14115625 14115063 ID=MsG0880042792.01.T01:cds;Parent=MsG0880042792.01.T01
Gene Sequence

>MsG0880042792.01.T01

ATGGATGACGACGACGAGATCCACTCGGTTAACTCGATCCACTCGAATCCATCTCCGGCGAGTGGTTCTCCATCTCCGGTGTCGTCTCCGGGAGCGATCGGTAGGATTTCGGTGACGGTTGCGGCACCGGCGGCGAACAGCTATGCATTAGCGCTTCCGATTCAGAATACGACACGTGGAAGCAACGGTGGAGGGAGGGAGGATTGTTGGAGCGAAGCAGCGACGGCGGTGTTGATTGAAGCGTGGGGAGAGAGTGTAAGAATCGGATTGATACGGTTAAGAAGAAGTATAAATCGGAGAAAGCTAAGATCGGTGCTGGAGGTGGCTCCGGCGGTGTTACAACCAGCACTTGGCGGTTTTATGATCGAAAGTTCCGTTAGGAATTCTGTTGGTATTCGCGCCTCTGGAGCTAGAGGCGCGAATCAAGCTAATTCTCAGAAGAAAGATATTCAACAAGCTCAGTTGAATTATCAGAAGATTCAGCTCAGACCACGCGTTTCTGAGCTGAATTCTTCTGATAATTCATCTGAAAAAGAAGCGTTGTCACCGGTGTCAAGCGACAGTTTACCACCACCGGAGAGGAAGAGAGCGAAAGTGATGAATTCAAATTCGAAGGGGAGAGGTTGGGGAAGTGCGGTGAGGGAATTGACTCAGGCAATTGTGAAATTTGGTGAAGCTTATGAACAAGCGGAGACGTCGAAGTTGCAGCAGGTGGTGGAGATGGAGAAGCAGAGGATGAAGTTTGCTAAGGATTTGGAGTTGCAGAGAATGCAGTTTTTCATGAAAACTCAGGTAGAGATTTCACAGTTGAAACTTGGGAAGAAAAAGTGTAATGTTAATGGTAACACAAGTAATCATCAAAACAACAACAATGTAACCAGCAACAACAACAACAATAGCAACCATAACAATAACAGTGACAGTGAGTGA

Protein sequence

>MsG0880042792.01.T01

MDDDDEIHSVNSIHSNPSPASGSPSPVSSPGAIGRISVTVAAPAANSYALALPIQNTTRGSNGGGREDCWSEAATAVLIEAWGESVRIGLIRLRRSINRRKLRSVLEVAPAVLQPALGGFMIESSVRNSVGIRASGARGANQANSQKKDIQQAQLNYQKIQLRPRVSELNSSDNSSEKEALSPVSSDSLPPPERKRAKVMNSNSKGRGWGSAVRELTQAIVKFGEAYEQAETSKLQQVVEMEKQRMKFAKDLELQRMQFFMKTQVEISQLKLGKKKCNVNGNTSNHQNNNNVTSNNNNNSNHNNNSDSE*