AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580025237.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580025237.01.T01 MTR_5g021500 71.698 477 20 5 157 518 393 869 0.0 616
MsG0580025237.01.T01 MTR_5g021500 76.400 250 24 3 522 736 1008 1257 2.47e-113 372
MsG0580025237.01.T01 MTR_5g021500 55.085 236 41 7 1 173 46 279 1.30e-58 216
MsG0580025237.01.T01 MTR_5g021450 44.444 225 104 3 311 514 237 461 1.89e-44 171
MsG0580025237.01.T01 MTR_5g021450 61.765 68 23 1 94 158 173 240 1.48e-17 87.8
MsG0580025237.01.T01 MTR_5g021450 60.656 61 21 2 15 74 33 91 2.01e-13 74.3
MsG0580025237.01.T01 MTR_3g117490 67.521 117 38 0 193 309 598 714 5.71e-43 169
MsG0580025237.01.T01 MTR_3g117490 64.407 59 21 0 385 443 915 973 1.73e-18 91.3
MsG0580025237.01.T01 MTR_5g021450 44.186 215 92 4 311 514 237 434 5.49e-38 151
MsG0580025237.01.T01 MTR_5g021450 34.066 182 105 4 94 262 173 352 1.95e-18 90.5
MsG0580025237.01.T01 MTR_5g021450 60.656 61 21 2 15 74 33 91 2.14e-13 74.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580025237.01.T01 AT2G16485 66.667 117 38 1 193 309 963 1078 3.50e-39 157
MsG0580025237.01.T01 AT2G16485 49.425 87 41 1 384 470 1306 1389 2.32e-18 90.9
MsG0580025237.01.T01 AT2G16485 67.826 115 36 1 193 307 963 1076 3.64e-39 157
MsG0580025237.01.T01 AT2G16485 49.425 87 41 1 384 470 1291 1374 2.32e-18 90.9
MsG0580025237.01.T01 AT3G51120 47.093 172 85 1 141 312 426 591 5.05e-37 150
MsG0580025237.01.T01 AT3G51120 50.575 87 36 1 388 474 732 811 7.77e-19 92.4
MsG0580025237.01.T01 AT3G51120 64.151 53 16 1 96 145 217 269 6.86e-12 69.7
MsG0580025237.01.T01 AT2G18090 51.948 77 37 0 377 453 448 524 1.17e-19 94.7
MsG0580025237.01.T01 AT2G18090 76.471 34 8 0 41 74 68 101 2.12e-11 68.2
MsG0580025237.01.T01 AT2G18090 51.948 77 37 0 377 453 448 524 1.28e-19 94.4
MsG0580025237.01.T01 AT2G18090 76.471 34 8 0 41 74 68 101 2.25e-11 67.8

Find 208 sgRNAs with CRISPR-Local

Find 459 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATACTTCCACCCATGATTT+TGG 0.149348 5:-15723539 MsG0580025237.01.T01:CDS
TTGTTAACTGATGCACTTAA+TGG 0.202378 5:-15724968 MsG0580025237.01.T01:CDS
GTTGCAGTTGCCGATGTTTC+CGG 0.211639 5:+15729812 None:intergenic
GGAGCTGTTTGTGATAATTT+TGG 0.228997 5:+15730023 None:intergenic
ATGAATCAGTTTCAGATCTT+TGG 0.243972 5:-15724313 MsG0580025237.01.T01:intron
GTTGCTGAACCTTACAAAAT+TGG 0.246056 5:-15726899 MsG0580025237.01.T01:CDS
TACCATCTTAAAGATGAAAA+AGG 0.271358 5:-15727711 MsG0580025237.01.T01:intron
ATCAATAATCATGAATAATT+AGG 0.282662 5:+15729896 None:intergenic
CATTTCCATTTCCATGTGTT+AGG 0.299346 5:-15729979 MsG0580025237.01.T01:five_prime_UTR
AGTAAGCATGTATTCTCAAT+TGG 0.319348 5:+15725278 None:intergenic
ATGGTGTCTTCAACGGTGTT+GGG 0.329642 5:-15725334 MsG0580025237.01.T01:CDS
TTGCGTCAAAGTATAAAGTA+TGG 0.336240 5:-15726658 MsG0580025237.01.T01:CDS
CTTCATAACCTCACTGTTCT+CGG 0.347536 5:+15729636 None:intergenic
TGATAGATCATGGCATTATC+AGG 0.347539 5:-15725113 MsG0580025237.01.T01:CDS
CTCTGATCTGTTCTATGATT+CGG 0.347556 5:+15724810 None:intergenic
GCCCAGAGATCGGGGTTTCC+TGG 0.349159 5:-15723719 MsG0580025237.01.T01:intron
TAAGAGATGCACAAGTAAAA+AGG 0.350827 5:-15727235 MsG0580025237.01.T01:CDS
GAAGACACCATCCCAAATTC+TGG 0.363188 5:+15725346 None:intergenic
TCATCAATAGGAGTTTCGTT+TGG 0.363221 5:+15725239 None:intergenic
GATGGTGTCTTCAACGGTGT+TGG 0.369123 5:-15725335 MsG0580025237.01.T01:CDS
AGGGAACCAGGTTTAGTTAG+AGG 0.373757 5:-15723689 MsG0580025237.01.T01:CDS
TTACAAACTCGCTGCCCTTT+GGG 0.376629 5:+15723602 None:intergenic
TACAGCTGCAACATAGAAAA+AGG 0.377698 5:+15725067 None:intergenic
CAAAGTACCGCAATTCCATT+TGG 0.377811 5:+15729218 None:intergenic
TCCCTCCAGATCTCAAAGTA+TGG 0.380048 5:-15725021 MsG0580025237.01.T01:CDS
CCGCCATTTGGTGTTGGTAA+TGG 0.381731 5:-15723644 MsG0580025237.01.T01:CDS
TGTTAACTGATGCACTTAAT+GGG 0.385550 5:-15724967 MsG0580025237.01.T01:CDS
GATCCATTCCTCCCCATTCC+AGG 0.385876 5:+15723878 None:intergenic
TCCCAAATTCTGGAGAAAAT+AGG 0.386571 5:+15725356 None:intergenic
GCTCCTCTGATATTCTTTGA+TGG 0.386995 5:+15724058 None:intergenic
CATCAATAGGAGTTTCGTTT+GGG 0.387224 5:+15725240 None:intergenic
TCTTCCTTCTTGATCTGCTT+CGG 0.391127 5:+15729565 None:intergenic
ATTACAAACTCGCTGCCCTT+TGG 0.394552 5:+15723601 None:intergenic
TATAGACTTGTCCAAGTTGT+AGG 0.396375 5:-15727026 MsG0580025237.01.T01:intron
GACAGTTCCGGTGGCCGTTA+CGG 0.402343 5:-15729775 MsG0580025237.01.T01:five_prime_UTR
CCTGGTCATGGTAGGGAACC+AGG 0.405604 5:-15723701 MsG0580025237.01.T01:CDS
GATAGACGAGATTTCGAATC+AGG 0.407835 5:-15726816 MsG0580025237.01.T01:CDS
CTTTAAGATGGTAAAGTTTG+TGG 0.413487 5:+15727721 None:intergenic
ATTTCCATTTCCATGTGTTA+GGG 0.414761 5:-15729978 MsG0580025237.01.T01:five_prime_UTR
ACGAAATGCAAACACGAGTT+GGG 0.415413 5:-15723854 MsG0580025237.01.T01:CDS
CTAACACATGGAAATGGAAA+TGG 0.415532 5:+15729980 None:intergenic
ATTCATCTTTACCATTAGAC+TGG 0.419959 5:+15724762 None:intergenic
AACAGCCTATTGCTCTCTTT+AGG 0.421297 5:-15724914 MsG0580025237.01.T01:CDS
GAGGCAGAGCTGCGTGGAAC+AGG 0.422436 5:-15723670 MsG0580025237.01.T01:CDS
TTCGGCGGAGGAGCTACTTT+CGG 0.429190 5:+15729583 None:intergenic
AGACAGTTCGGCGACAGTTC+CGG 0.429918 5:-15729787 MsG0580025237.01.T01:five_prime_UTR
CTATGTTGCAGCTGTATAAG+TGG 0.431594 5:-15725060 MsG0580025237.01.T01:CDS
CAAATGCGGCCAATGCTAAT+GGG 0.434386 5:+15723514 None:intergenic
TGGCTCCTAAAGAGAGCAAT+AGG 0.435384 5:+15724909 None:intergenic
TGGCATTATCAGGATCCATC+TGG 0.437750 5:-15725103 MsG0580025237.01.T01:CDS
TGGAACAGGCAACCGCCATT+TGG 0.439002 5:-15723656 MsG0580025237.01.T01:CDS
GAAAGTAGAGAGAGAATATG+TGG 0.439258 5:+15730091 None:intergenic
GTAAGCATGTATTCTCAATT+GGG 0.439319 5:+15725279 None:intergenic
GTAGACACCACTTGGAGACT+TGG 0.445086 5:-15723916 MsG0580025237.01.T01:CDS
AATGGAATCGCTTGGTGGCT+TGG 0.445389 5:-15724277 MsG0580025237.01.T01:CDS
GAAGAAGAAGCGCGGTCGTC+CGG 0.446023 5:-15729617 MsG0580025237.01.T01:CDS
ATCCTCCATACTTTGAGATC+TGG 0.448703 5:+15725016 None:intergenic
ACATCAGCACTATCATCAAT+AGG 0.453370 5:+15725227 None:intergenic
AAAACCCTAACACATGGAAA+TGG 0.453549 5:+15729974 None:intergenic
CATGCCAATGTTGCAGTGGC+TGG 0.454955 5:+15723942 None:intergenic
GGAAAGTACACACCTGGAAT+GGG 0.456457 5:-15723890 MsG0580025237.01.T01:CDS
GATACTTCGACCCAGTCTAA+TGG 0.457443 5:-15724773 MsG0580025237.01.T01:CDS
TTTAAGATGGTAAAGTTTGT+GGG 0.462817 5:+15727722 None:intergenic
TTTCAGATCTTTGGCAGAAG+TGG 0.462846 5:-15724304 MsG0580025237.01.T01:CDS
ATTGAGCGCTGCTGCTCCTA+TGG 0.466028 5:-15727754 MsG0580025237.01.T01:CDS
GTTTGCTTCATTTGCTTCGA+CGG 0.470458 5:-15729535 MsG0580025237.01.T01:CDS
GAAGAGATCTCTATCAAGCT+AGG 0.470692 5:+15730064 None:intergenic
TGGAAAGTACACACCTGGAA+TGG 0.470741 5:-15723891 MsG0580025237.01.T01:CDS
TAGGAGCAGCAGCGCTCAAT+GGG 0.471296 5:+15727757 None:intergenic
GATCCATCTGGGAAGGTTCA+AGG 0.471913 5:-15725091 MsG0580025237.01.T01:CDS
CTCAATTGGGTCACTGGCAG+TGG 0.472098 5:+15725292 None:intergenic
AGGATTCACGAGAAGGTTGT+TGG 0.472648 5:-15727098 MsG0580025237.01.T01:CDS
TTGTGGGAAGTTTGAACCAT+AGG 0.473304 5:+15727738 None:intergenic
CACCACTTGGAGACTTGGAT+TGG 0.478908 5:-15723911 MsG0580025237.01.T01:CDS
ATTAGTGATGCTGTTGCAAA+TGG 0.481762 5:-15727306 MsG0580025237.01.T01:CDS
TTCAAGTAACCAGTGGAGTC+AGG 0.482359 5:-15723986 MsG0580025237.01.T01:CDS
CGTATAGACCTCTGCCCAAA+GGG 0.484540 5:-15723616 MsG0580025237.01.T01:CDS
ATAGGAGCAGCAGCGCTCAA+TGG 0.488771 5:+15727756 None:intergenic
TGGTGTCTTCAACGGTGTTG+GGG 0.489107 5:-15725333 MsG0580025237.01.T01:CDS
GCTAATGGGATCCAAAATCA+TGG 0.489646 5:+15723528 None:intergenic
TGTATTCTCAATTGGGTCAC+TGG 0.492209 5:+15725286 None:intergenic
CTATCGATATGACCTCCTTC+CGG 0.492961 5:+15726834 None:intergenic
GTCTCGTTCTCTGCGATCGC+CGG 0.493648 5:-15729507 MsG0580025237.01.T01:intron
TTCTTGATCTGCTTCGGCGG+AGG 0.494190 5:+15729571 None:intergenic
GATGAATCCGTTAGGAGCAA+TGG 0.495944 5:-15724746 MsG0580025237.01.T01:CDS
CGGGGTTTCCTGGTCATGGT+AGG 0.497445 5:-15723709 MsG0580025237.01.T01:CDS
AACGAAATGCAAACACGAGT+TGG 0.499133 5:-15723855 MsG0580025237.01.T01:CDS
ACATGGAAATGGAAATGGAC+TGG 0.500309 5:+15729985 None:intergenic
TTTAGGAGCCAATGTTGCAT+TGG 0.503048 5:-15724897 MsG0580025237.01.T01:CDS
ATTTCGATGACAAGAGCAGC+TGG 0.503366 5:-15727860 MsG0580025237.01.T01:CDS
ATTTATGGAACAATCAAAGC+CGG 0.504469 5:-15729831 MsG0580025237.01.T01:five_prime_UTR
ACTCGCTGCCCTTTGGGCAG+AGG 0.505416 5:+15723608 None:intergenic
CCTCCATTACCAACACCAAA+TGG 0.507490 5:+15723641 None:intergenic
TTTATGAAAGTGGGTACTGT+AGG 0.507920 5:-15723578 MsG0580025237.01.T01:CDS
TCTTCCGTTCAAAAGCCAAA+TGG 0.509901 5:-15729233 MsG0580025237.01.T01:CDS
CTCCGCCGCGGTCTCCGTAA+CGG 0.511292 5:+15729761 None:intergenic
GAGAGACGGCGGTTGTTGTA+CGG 0.511402 5:-15729686 MsG0580025237.01.T01:CDS
TTTGTCATCCAATGCAACAT+TGG 0.511832 5:+15724889 None:intergenic
CAGATCTTTGGCAGAAGTGG+AGG 0.512509 5:-15724301 MsG0580025237.01.T01:CDS
CCATTTGGTGTTGGTAATGG+AGG 0.516121 5:-15723641 MsG0580025237.01.T01:CDS
AAAGTGGGTACTGTAGGAAA+GGG 0.516641 5:-15723572 MsG0580025237.01.T01:CDS
CAACTGCAACGGAGACAGTT+CGG 0.519308 5:-15729799 MsG0580025237.01.T01:five_prime_UTR
TCATTCATAAAATCATCAAA+TGG 0.527514 5:+15725133 None:intergenic
TCCTTCTTGATCTGCTTCGG+CGG 0.529690 5:+15729568 None:intergenic
GCGGTCTCCGTAACGGCCAC+CGG 0.530407 5:+15729768 None:intergenic
ATGACAGCGAGAACTACTTT+CGG 0.532438 5:+15729661 None:intergenic
ACACCTGGAATGGGGAGGAA+TGG 0.534911 5:-15723881 MsG0580025237.01.T01:CDS
ATGGTAAAGATGAATCCGTT+AGG 0.539201 5:-15724754 MsG0580025237.01.T01:CDS
GAAAGTGGGTACTGTAGGAA+AGG 0.542249 5:-15723573 MsG0580025237.01.T01:CDS
AAGAGATCTCTATCAAGCTA+GGG 0.544078 5:+15730065 None:intergenic
CTCCATACTTTGAGATCTGG+AGG 0.545239 5:+15725019 None:intergenic
CTTAGTCCAATGCTTGATGC+AGG 0.546756 5:-15724177 MsG0580025237.01.T01:CDS
ATTTGGGATGGTGTCTTCAA+CGG 0.548482 5:-15725341 MsG0580025237.01.T01:CDS
TGCTTCATTTGCTTCGACGG+TGG 0.548926 5:-15729532 MsG0580025237.01.T01:CDS
GACTGGGTTCAGATGTAAGA+AGG 0.551185 5:+15730002 None:intergenic
TTGACATCTGCTTGTTGTAA+CGG 0.553275 5:+15724087 None:intergenic
AGATCGGGGTTTCCTGGTCA+TGG 0.553569 5:-15723713 MsG0580025237.01.T01:CDS
TCATGGGTGGAAGTATTCAC+AGG 0.553606 5:+15723545 None:intergenic
GGGGTTTCCTGGTCATGGTA+GGG 0.554770 5:-15723708 MsG0580025237.01.T01:CDS
TTCATCTTTACCATTAGACT+GGG 0.555707 5:+15724763 None:intergenic
GGCATTATCAGGATCCATCT+GGG 0.561353 5:-15725102 MsG0580025237.01.T01:CDS
TATGAGTCTGATGAAGATGC+TGG 0.561952 5:-15725511 MsG0580025237.01.T01:intron
TTTAAATTTAAACCGGAAGG+AGG 0.562088 5:-15726846 MsG0580025237.01.T01:CDS
ACAATCAAAGCCGGAAACAT+CGG 0.563364 5:-15729822 MsG0580025237.01.T01:five_prime_UTR
TTTGGCAGAAGTGGAGGCAA+TGG 0.563473 5:-15724295 MsG0580025237.01.T01:CDS
GTGGAGGCAATGGAATCGCT+TGG 0.564327 5:-15724285 MsG0580025237.01.T01:CDS
AAGCGCGGTCGTCCGGCGAA+AGG 0.564717 5:-15729610 MsG0580025237.01.T01:CDS
CTACGTTTCATGATTGAAGT+GGG 0.566724 5:+15724249 None:intergenic
CATGGAAATGGAAATGGACT+GGG 0.568147 5:+15729986 None:intergenic
AAGAAAGCAGTCAGGATGGT+GGG 0.568241 5:-15724868 MsG0580025237.01.T01:CDS
AGGCAACCGCCATTTGGTGT+TGG 0.569763 5:-15723650 MsG0580025237.01.T01:CDS
GGAAACATCGGCAACTGCAA+CGG 0.570455 5:-15729810 MsG0580025237.01.T01:five_prime_UTR
GGATGACAAAGAAAGCAGTC+AGG 0.572470 5:-15724876 MsG0580025237.01.T01:CDS
TCGTATAGACCTCTGCCCAA+AGG 0.573598 5:-15723617 MsG0580025237.01.T01:CDS
TGCGTCAAAGTATAAAGTAT+GGG 0.574180 5:-15726657 MsG0580025237.01.T01:CDS
GCAAGTTGAAGTTCCGACGA+AGG 0.578052 5:-15729733 MsG0580025237.01.T01:five_prime_UTR
GCATGACTGTAGACACCACT+TGG 0.578287 5:-15723924 MsG0580025237.01.T01:CDS
GCTCTGCCTCTAACTAAACC+TGG 0.580099 5:+15723683 None:intergenic
ACACGCCGGATGATACGCTT+AGG 0.580310 5:+15729275 None:intergenic
ATGCCATCCATTGCTCCTAA+CGG 0.581344 5:+15724739 None:intergenic
GTCTGACTGATGATAGTGAA+AGG 0.583848 5:-15727118 MsG0580025237.01.T01:CDS
ACTACGTTTCATGATTGAAG+TGG 0.584103 5:+15724248 None:intergenic
ATCTCAATCTACAGCAGCAG+AGG 0.584635 5:-15724112 MsG0580025237.01.T01:CDS
GCAAACACGAGTTGGGGAGT+AGG 0.584654 5:-15723847 MsG0580025237.01.T01:CDS
TAGTGAAAGGATTCACGAGA+AGG 0.590332 5:-15727105 MsG0580025237.01.T01:CDS
GGTCCTTGAACCTTCCCAGA+TGG 0.590343 5:+15725088 None:intergenic
AATAGGCTGTTGTTCCGCAA+TGG 0.597034 5:+15724926 None:intergenic
CCTGGTTCCCTACCATGACC+AGG 0.598011 5:+15723701 None:intergenic
CTAATGGGATCCAAAATCAT+GGG 0.603693 5:+15723529 None:intergenic
CTGTATAAGTGGAATGCAAG+TGG 0.605595 5:-15725049 MsG0580025237.01.T01:CDS
ACTTTCGGAGTTCCTTTCGC+CGG 0.606950 5:+15729598 None:intergenic
GACAAAGAAAGCAGTCAGGA+TGG 0.607040 5:-15724872 MsG0580025237.01.T01:CDS
AAGTTCACATACCTACAACT+TGG 0.607330 5:+15727015 None:intergenic
CACATCGGAACAGCCTTCGT+CGG 0.607742 5:+15729720 None:intergenic
GTAACCAGTGGAGTCAGGCT+CGG 0.608362 5:-15723981 MsG0580025237.01.T01:CDS
TGGATTGGAAAGTACACACC+TGG 0.609215 5:-15723896 MsG0580025237.01.T01:CDS
GAGGCAATGGAATCGCTTGG+TGG 0.610924 5:-15724282 MsG0580025237.01.T01:CDS
GGTGTCTTCAACGGTGTTGG+GGG 0.611351 5:-15725332 MsG0580025237.01.T01:CDS
GTCAACTTTAGAATTTCTCG+AGG 0.616845 5:+15724032 None:intergenic
AAAGAAAGCAGTCAGGATGG+TGG 0.617264 5:-15724869 MsG0580025237.01.T01:CDS
CGAAATGCAAACACGAGTTG+GGG 0.617307 5:-15723853 MsG0580025237.01.T01:CDS
GTTGTCCTAAGCGTATCATC+CGG 0.619996 5:-15729280 MsG0580025237.01.T01:CDS
CGTAGTGAGGAATTGACTGA+TGG 0.621062 5:-15724231 MsG0580025237.01.T01:CDS
GAGTTGGGGAGTAGGACATA+CGG 0.621523 5:-15723839 MsG0580025237.01.T01:CDS
GAGAAATTCTAAAGTTGACG+TGG 0.629269 5:-15724028 MsG0580025237.01.T01:CDS
AACTTGCTTCGTCTCCGCCG+CGG 0.631018 5:+15729749 None:intergenic
GTGAACATGACGGAGAGAGA+CGG 0.631033 5:-15729700 MsG0580025237.01.T01:exon
CAGTTCGGCGACAGTTCCGG+TGG 0.632451 5:-15729784 MsG0580025237.01.T01:five_prime_UTR
CTCCAGATCTCAAAGTATGG+AGG 0.636299 5:-15725018 MsG0580025237.01.T01:CDS
TTATCAGGATCCATCTGGGA+AGG 0.637004 5:-15725098 MsG0580025237.01.T01:CDS
TTTCGATGACAAGAGCAGCT+GGG 0.637251 5:-15727859 MsG0580025237.01.T01:CDS
AGAAATTCTAAAGTTGACGT+GGG 0.639228 5:-15724027 MsG0580025237.01.T01:CDS
ATGGGATCCAAAATCATGGG+TGG 0.640005 5:+15723532 None:intergenic
TCCGCCGAAGCAGATCAAGA+AGG 0.640783 5:-15729569 MsG0580025237.01.T01:CDS
CAGTCATGCCAATGTTGCAG+TGG 0.642783 5:+15723938 None:intergenic
TCACCATCAAAGAATATCAG+AGG 0.643495 5:-15724061 MsG0580025237.01.T01:CDS
TCAAAAGCCAAATGGAATTG+CGG 0.644100 5:-15729225 MsG0580025237.01.T01:intron
TTCAATCATGAAACGTAGTG+AGG 0.644665 5:-15724244 MsG0580025237.01.T01:CDS
GAGTCAGATGGCAATAAACA+AGG 0.652111 5:-15725487 MsG0580025237.01.T01:intron
TCCATACTTTGAGATCTGGA+GGG 0.653191 5:+15725020 None:intergenic
TAGTAACTGTAAATCACATG+TGG 0.653829 5:+15724134 None:intergenic
AATCCGTTAGGAGCAATGGA+TGG 0.654526 5:-15724742 MsG0580025237.01.T01:CDS
ATTGAGTTGAGTTTGCGTGA+GGG 0.656214 5:+15729938 None:intergenic
TAGTTAGAGGCAGAGCTGCG+TGG 0.657531 5:-15723676 MsG0580025237.01.T01:CDS
AAAGTGAAAACCCTAACACA+TGG 0.657958 5:+15729968 None:intergenic
GAAGATGCTGGAGAGTCAGA+TGG 0.658657 5:-15725499 MsG0580025237.01.T01:CDS
GAAAGTACACACCTGGAATG+GGG 0.660607 5:-15723889 MsG0580025237.01.T01:CDS
GTGCGGATAAGAATCTCTAG+TGG 0.660680 5:-15727068 MsG0580025237.01.T01:CDS
TAATTGTGCAGGTACAAGCA+AGG 0.661666 5:-15726921 MsG0580025237.01.T01:intron
AATTGAGTTGAGTTTGCGTG+AGG 0.661978 5:+15729937 None:intergenic
TTCCAATCCAAGTCTCCAAG+TGG 0.667946 5:+15723909 None:intergenic
CTGTTCCGATGTGAACATGA+CGG 0.669441 5:-15729710 MsG0580025237.01.T01:exon
TGATGCTGTTGCAAATGGAA+AGG 0.670038 5:-15727301 MsG0580025237.01.T01:CDS
TGCTGTTGCAAATGGAAAGG+AGG 0.671749 5:-15727298 MsG0580025237.01.T01:CDS
TCATCTCGCTTGACACACGC+CGG 0.676664 5:+15729261 None:intergenic
GCTTTCAAAGAGATTGACTG+TGG 0.679086 5:-15726635 MsG0580025237.01.T01:intron
GGCCGTTACGGAGACCGCGG+CGG 0.679201 5:-15729763 MsG0580025237.01.T01:five_prime_UTR
TATGTGTTTCAAGTAACCAG+TGG 0.680877 5:-15723993 MsG0580025237.01.T01:CDS
AAGTGGGTACTGTAGGAAAG+GGG 0.681811 5:-15723571 MsG0580025237.01.T01:CDS
TCTCTCCGTCATGTTCACAT+CGG 0.683465 5:+15729705 None:intergenic
AAAGCAGTCAGGATGGTGGG+AGG 0.690722 5:-15724865 MsG0580025237.01.T01:CDS
GGTGGCCGTTACGGAGACCG+CGG 0.699489 5:-15729766 MsG0580025237.01.T01:five_prime_UTR
AGTACACACCTGGAATGGGG+AGG 0.705466 5:-15723886 MsG0580025237.01.T01:CDS
CCATTACCAACACCAAATGG+CGG 0.710852 5:+15723644 None:intergenic
TTCGAATCAGGAGTTCTCCG+AGG 0.712977 5:-15726804 MsG0580025237.01.T01:intron
AACATGACGGAGAGAGACGG+CGG 0.721172 5:-15729697 MsG0580025237.01.T01:CDS
GAGGTTATGAAGAAGAAGCG+CGG 0.742865 5:-15729625 MsG0580025237.01.T01:CDS
TGTCATCGCCGAGAACAGTG+AGG 0.750277 5:-15729644 MsG0580025237.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTGAAATTTTAAATTTAAAC+CGG - Chr5:15726773-15726792 MsG0580025237.01.T01:intron 10.0%
!! AAACTTTATGTTTCATTTAT+TGG + Chr5:15727650-15727669 None:intergenic 15.0%
!! ATCAATAATCATGAATAATT+AGG + Chr5:15723733-15723752 None:intergenic 15.0%
!! ATGTATATTCAAACATAATT+TGG - Chr5:15724981-15725000 MsG0580025237.01.T01:CDS 15.0%
!!! AGTAAATTTCTTTTTTTATC+TGG - Chr5:15727147-15727166 MsG0580025237.01.T01:intron 15.0%
!!! ATTTTCTTTTATAAGAAAGT+GGG + Chr5:15726270-15726289 None:intergenic 15.0%
!!! CAATTTTTTAACAAAGAATT+AGG - Chr5:15727860-15727879 MsG0580025237.01.T01:CDS 15.0%
!!! TATTTTCTTTTATAAGAAAG+TGG + Chr5:15726271-15726290 None:intergenic 15.0%
!!! TTTGAATATACATGATTTTT+AGG + Chr5:15724974-15724993 None:intergenic 15.0%
!! AAATAAAAAATCGAATCGAA+TGG + Chr5:15723779-15723798 None:intergenic 20.0%
!! AATAACTACATCAATAAAAG+AGG + Chr5:15727449-15727468 None:intergenic 20.0%
!! AGTAATTATTTACATGCAAT+TGG - Chr5:15724487-15724506 MsG0580025237.01.T01:intron 20.0%
!! ATAAGAAGAATACAACAAAA+AGG + Chr5:15727771-15727790 None:intergenic 20.0%
!! ATATTTAGGAAAGAAGTAAA+TGG + Chr5:15727548-15727567 None:intergenic 20.0%
!! ATTAAACCTAAAGAACAAAA+CGG + Chr5:15724447-15724466 None:intergenic 20.0%
!! CATATACATAATCATAGTTA+CGG + Chr5:15728236-15728255 None:intergenic 20.0%
!! GTTATTCATTAATCATCTAT+TGG - Chr5:15725101-15725120 MsG0580025237.01.T01:CDS 20.0%
!! TCATTCATAAAATCATCAAA+TGG + Chr5:15728496-15728515 None:intergenic 20.0%
!! TTATAGATTCTATCTTAGAT+TGG - Chr5:15724217-15724236 MsG0580025237.01.T01:CDS 20.0%
!!! AAATTTTGTGTAATAATGAC+CGG - Chr5:15724766-15724785 MsG0580025237.01.T01:CDS 20.0%
!!! AATTTTAAATTTAAACCGGA+AGG - Chr5:15726777-15726796 MsG0580025237.01.T01:intron 20.0%
!!! AGAATGGAATAATTTTGAAT+TGG - Chr5:15724163-15724182 MsG0580025237.01.T01:CDS 20.0%
!!! AGTTTGTAATTTTATGAAAG+TGG - Chr5:15730038-15730057 MsG0580025237.01.T01:five_prime_UTR 20.0%
!!! ATTTTATGAATGATAGATCA+TGG - Chr5:15728503-15728522 MsG0580025237.01.T01:intron 20.0%
!!! ATTTTATTTGTGATATTGCT+TGG - Chr5:15724510-15724529 MsG0580025237.01.T01:intron 20.0%
!!! ATTTTGTATGAGGTTTATAA+TGG - Chr5:15727054-15727073 MsG0580025237.01.T01:CDS 20.0%
!!! GATAATTTTGGTAATTTTGT+GGG + Chr5:15723594-15723613 None:intergenic 20.0%
!!! GCAAGAAATAAATTTTAACA+TGG - Chr5:15727890-15727909 MsG0580025237.01.T01:intron 20.0%
!!! GTCTATTTTTGAAAAAATTG+TGG - Chr5:15725015-15725034 MsG0580025237.01.T01:CDS 20.0%
!!! GTTTGTAATTTTATGAAAGT+GGG - Chr5:15730039-15730058 MsG0580025237.01.T01:five_prime_UTR 20.0%
!!! TCGATTCGATTTTTTATTTA+TGG - Chr5:15723780-15723799 MsG0580025237.01.T01:intron 20.0%
!!! TCTTTTATTGATGTAGTTAT+TGG - Chr5:15727448-15727467 MsG0580025237.01.T01:intron 20.0%
!!! TGATAATTTTGGTAATTTTG+TGG + Chr5:15723595-15723614 None:intergenic 20.0%
!!! TTTTCTTTTATAAGAAAGTG+GGG + Chr5:15726269-15726288 None:intergenic 20.0%
! AAACATACACTTGAAAATCA+TGG + Chr5:15724903-15724922 None:intergenic 25.0%
! AAACTTGAAAAAAAACTCAG+TGG + Chr5:15728180-15728199 None:intergenic 25.0%
! AAATCGTTGTTAATTGTGTT+TGG + Chr5:15724867-15724886 None:intergenic 25.0%
! AAGTAATTTCCTATTTACCT+CGG + Chr5:15726842-15726861 None:intergenic 25.0%
! AATATATTTATCCTATGTCC+AGG - Chr5:15726931-15726950 MsG0580025237.01.T01:intron 25.0%
! AATGAATGAATAAGCAGAAA+AGG + Chr5:15727969-15727988 None:intergenic 25.0%
! ACAAAATATAGCATACTTCA+TGG + Chr5:15727041-15727060 None:intergenic 25.0%
! ACATGTATAGCACATATAAT+GGG + Chr5:15725434-15725453 None:intergenic 25.0%
! AGCATATGGTTAAATTAGTT+CGG - Chr5:15724793-15724812 MsG0580025237.01.T01:CDS 25.0%
! AGCATGGCATTAAATTATTT+AGG + Chr5:15727271-15727290 None:intergenic 25.0%
! ATGGTCACTTAAATCTAAAA+AGG - Chr5:15724819-15724838 MsG0580025237.01.T01:CDS 25.0%
! ATTTCCACCAAAAAAAAAAG+AGG + Chr5:15727418-15727437 None:intergenic 25.0%
! ATTTGATTCTATATCTACAC+AGG + Chr5:15725958-15725977 None:intergenic 25.0%
! CATTTAATAACTAATGTACC+TGG - Chr5:15724694-15724713 MsG0580025237.01.T01:intron 25.0%
! GCAAAAAGAAAGTCTATTAA+AGG + Chr5:15725369-15725388 None:intergenic 25.0%
! GTGATAGATTTCTCAAAATA+AGG + Chr5:15725289-15725308 None:intergenic 25.0%
! GTTAACACAATTCAAATATG+TGG + Chr5:15725137-15725156 None:intergenic 25.0%
! GTTTCTGTTAGAGAAAATAA+AGG - Chr5:15725495-15725514 MsG0580025237.01.T01:CDS 25.0%
! TAAGTAACATTTCAAAAGCA+TGG + Chr5:15727287-15727306 None:intergenic 25.0%
! TACATGTATAGCACATATAA+TGG + Chr5:15725435-15725454 None:intergenic 25.0%
! TACCATCTTAAAGATGAAAA+AGG - Chr5:15725915-15725934 MsG0580025237.01.T01:intron 25.0%
! TATGATTATGTATATGCAGA+TGG - Chr5:15728240-15728259 MsG0580025237.01.T01:intron 25.0%
! TATTAAATGAATCTGCAAAG+TGG + Chr5:15724683-15724702 None:intergenic 25.0%
! TCATACAATGAATCCAAATT+GGG + Chr5:15728100-15728119 None:intergenic 25.0%
! TGGTTTAGTAATCTGATTTA+CGG - Chr5:15727167-15727186 MsG0580025237.01.T01:intron 25.0%
!! AGTATGCTATATTTTGTATG+AGG - Chr5:15727044-15727063 MsG0580025237.01.T01:CDS 25.0%
!! GAAAAAAACTCTGAAGATAA+TGG - Chr5:15729005-15729024 MsG0580025237.01.T01:intron 25.0%
!! GTATGCATCTTGATTATTTT+GGG + Chr5:15726430-15726449 None:intergenic 25.0%
!! TTTAAGATGGTAAAGTTTGT+GGG + Chr5:15725907-15725926 None:intergenic 25.0%
!!! AACCTTTTTCATCTTTAAGA+TGG + Chr5:15725920-15725939 None:intergenic 25.0%
!!! ATGAATGCCTCTTTTTTTTT+TGG - Chr5:15727408-15727427 MsG0580025237.01.T01:intron 25.0%
!!! TGGAAGAAGTATTTACATTA+TGG + Chr5:15729145-15729164 None:intergenic 25.0%
AAATACTTCTTCCAATTGCT+TGG - Chr5:15729151-15729170 MsG0580025237.01.T01:intron 30.0%
AATTCAATTCAGATGGCATT+TGG + Chr5:15727317-15727336 None:intergenic 30.0%
AATTGCGGCTTAATAATCTT+CGG - Chr5:15727480-15727499 MsG0580025237.01.T01:intron 30.0%
ACAATTAGAGATTTCTGTTG+AGG + Chr5:15726174-15726193 None:intergenic 30.0%
AGAGAAAATAAAGGTTTGTG+TGG - Chr5:15725504-15725523 MsG0580025237.01.T01:CDS 30.0%
AGATCACACCAACAAATTAA+GGG - Chr5:15728968-15728987 MsG0580025237.01.T01:intron 30.0%
AGGAAAGAAGTAAATGGTAA+AGG + Chr5:15727542-15727561 None:intergenic 30.0%
AGTAAGCATGTATTCTCAAT+TGG + Chr5:15728351-15728370 None:intergenic 30.0%
ATATGGTTAAATTAGTTCGG+TGG - Chr5:15724796-15724815 MsG0580025237.01.T01:CDS 30.0%
ATGAATCAGTTTCAGATCTT+TGG - Chr5:15729313-15729332 MsG0580025237.01.T01:intron 30.0%
ATTCATCTTTACCATTAGAC+TGG + Chr5:15728867-15728886 None:intergenic 30.0%
ATTTATGGAACAATCAAAGC+CGG - Chr5:15723795-15723814 MsG0580025237.01.T01:intron 30.0%
ATTTCCATTTCCATGTGTTA+GGG - Chr5:15723648-15723667 MsG0580025237.01.T01:CDS 30.0%
CAATGTGTAAAAATTCACTG+AGG + Chr5:15726652-15726671 None:intergenic 30.0%
CAATTAGAGATTTCTGTTGA+GGG + Chr5:15726173-15726192 None:intergenic 30.0%
CACTTAAATCTAAAAAGGTG+CGG - Chr5:15724824-15724843 MsG0580025237.01.T01:CDS 30.0%
CACTTGAAAATCATGGTTAA+TGG + Chr5:15724896-15724915 None:intergenic 30.0%
CATACAATGAATCCAAATTG+GGG + Chr5:15728099-15728118 None:intergenic 30.0%
CTAATCGGCAAATTAACAAA+TGG + Chr5:15725254-15725273 None:intergenic 30.0%
CTCATACAATGAATCCAAAT+TGG + Chr5:15728101-15728120 None:intergenic 30.0%
CTCATTCAAATTCTCAGAAA+AGG + Chr5:15728950-15728969 None:intergenic 30.0%
CTCTAGACTAGTAAATTGTT+TGG - Chr5:15726200-15726219 MsG0580025237.01.T01:intron 30.0%
CTTAAAGATGAAAAAGGTTC+TGG - Chr5:15725921-15725940 MsG0580025237.01.T01:intron 30.0%
GCAAATGAAATGATACATGA+TGG - Chr5:15725701-15725720 MsG0580025237.01.T01:intron 30.0%
GGCATTAAATTATTTAGGCA+TGG + Chr5:15727266-15727285 None:intergenic 30.0%
GTAAGCATGTATTCTCAATT+GGG + Chr5:15728350-15728369 None:intergenic 30.0%
GTTTGTCTCACATATGAAAA+TGG - Chr5:15726072-15726091 MsG0580025237.01.T01:intron 30.0%
TAAGAGATGCACAAGTAAAA+AGG - Chr5:15726391-15726410 MsG0580025237.01.T01:intron 30.0%
TAGTAACTGTAAATCACATG+TGG + Chr5:15729495-15729514 None:intergenic 30.0%
TCCTAAATATGCTAAACTGT+GGG - Chr5:15727558-15727577 MsG0580025237.01.T01:intron 30.0%
TCTCACAAATTCAATTCAGA+TGG + Chr5:15727324-15727343 None:intergenic 30.0%
TCTGATATGTATTATAGACC+AGG + Chr5:15724715-15724734 None:intergenic 30.0%
TGCGTCAAAGTATAAAGTAT+GGG - Chr5:15726969-15726988 MsG0580025237.01.T01:intron 30.0%
TGTTAACTGATGCACTTAAT+GGG - Chr5:15728659-15728678 MsG0580025237.01.T01:intron 30.0%
TGTTTGTAATAGTGACACAA+GGG + Chr5:15724655-15724674 None:intergenic 30.0%
TTCATCTTTACCATTAGACT+GGG + Chr5:15728866-15728885 None:intergenic 30.0%
TTCCTAAATATGCTAAACTG+TGG - Chr5:15727557-15727576 MsG0580025237.01.T01:intron 30.0%
TTGAAAAACAAGAAGCCTAA+GGG - Chr5:15725980-15725999 MsG0580025237.01.T01:intron 30.0%
TTGCGTCAAAGTATAAAGTA+TGG - Chr5:15726968-15726987 MsG0580025237.01.T01:intron 30.0%
TTGTTAACTGATGCACTTAA+TGG - Chr5:15728658-15728677 MsG0580025237.01.T01:intron 30.0%
TTGTTTGTAATAGTGACACA+AGG + Chr5:15724656-15724675 None:intergenic 30.0%
TTTAAATTTAAACCGGAAGG+AGG - Chr5:15726780-15726799 MsG0580025237.01.T01:intron 30.0%
TTTGAAAAACAAGAAGCCTA+AGG - Chr5:15725979-15725998 MsG0580025237.01.T01:intron 30.0%
! ACATTAACTTGATCTACTTG+CGG - Chr5:15726469-15726488 MsG0580025237.01.T01:intron 30.0%
! ACCTATTTTCTCCAGAATTT+GGG - Chr5:15728269-15728288 MsG0580025237.01.T01:intron 30.0%
! ACTGATTCATCAAAATCATC+TGG + Chr5:15729303-15729322 None:intergenic 30.0%
! CGTATGCATCTTGATTATTT+TGG + Chr5:15726431-15726450 None:intergenic 30.0%
! CTCCAAAATTATTTTCTGCA+GGG + Chr5:15726295-15726314 None:intergenic 30.0%
! GCTAATGATGTTTAAAGTTG+TGG - Chr5:15725037-15725056 MsG0580025237.01.T01:CDS 30.0%
! TACCTATTTTCTCCAGAATT+TGG - Chr5:15728268-15728287 MsG0580025237.01.T01:intron 30.0%
! TCCAAAATTATTTTCTGCAG+GGG + Chr5:15726294-15726313 None:intergenic 30.0%
! TCTCTCTCTTTTCATTTCTA+GGG - Chr5:15724323-15724342 MsG0580025237.01.T01:intron 30.0%
! TTCTCTCTCTTTTCATTTCT+AGG - Chr5:15724322-15724341 MsG0580025237.01.T01:intron 30.0%
!! AGAAATTCTAAAGTTGACGT+GGG - Chr5:15729599-15729618 MsG0580025237.01.T01:CDS 30.0%
!! AGTATCTTTTCAAGGTGTAT+TGG - Chr5:15725790-15725809 MsG0580025237.01.T01:intron 30.0%
!! CTTAAACCGTTTTGTTCTTT+AGG - Chr5:15724438-15724457 MsG0580025237.01.T01:intron 30.0%
!! CTTTAAGATGGTAAAGTTTG+TGG + Chr5:15725908-15725927 None:intergenic 30.0%
!! TCACGTCTTGAAATTAGTTT+TGG - Chr5:15726678-15726697 MsG0580025237.01.T01:intron 30.0%
!!! AATGCCTCTTTTTTTTTTGG+TGG - Chr5:15727411-15727430 MsG0580025237.01.T01:intron 30.0%
!!! AATTCCATTTGGCTTTTGAA+CGG + Chr5:15724400-15724419 None:intergenic 30.0%
!!! TTCTATCTTAGATTGGCTTT+TGG - Chr5:15724224-15724243 MsG0580025237.01.T01:CDS 30.0%
AAAACCCTAACACATGGAAA+TGG + Chr5:15723655-15723674 None:intergenic 35.0%
AAAGTGAAAACCCTAACACA+TGG + Chr5:15723661-15723680 None:intergenic 35.0%
AAATCAAATCCCAGCTTAAG+TGG + Chr5:15729219-15729238 None:intergenic 35.0%
AAATTCTCAGAAAAGGCAGT+TGG + Chr5:15728943-15728962 None:intergenic 35.0%
AACAAATTAAGGGAGGATCA+TGG - Chr5:15728978-15728997 MsG0580025237.01.T01:intron 35.0%
AAGAGATCTCTATCAAGCTA+GGG + Chr5:15723564-15723583 None:intergenic 35.0%
AAGTTCACATACCTACAACT+TGG + Chr5:15726614-15726633 None:intergenic 35.0%
AAGTTGTGGTTAATTGTGCT+TGG - Chr5:15725051-15725070 MsG0580025237.01.T01:CDS 35.0%
ACAAATTAAGGGAGGATCAT+GGG - Chr5:15728979-15728998 MsG0580025237.01.T01:intron 35.0%
ACAGATCAGAGAACAAAAAG+TGG - Chr5:15728828-15728847 MsG0580025237.01.T01:intron 35.0%
ACATCAGCACTATCATCAAT+AGG + Chr5:15728402-15728421 None:intergenic 35.0%
ACCCACAGTTTAGCATATTT+AGG + Chr5:15727562-15727581 None:intergenic 35.0%
ACTACGTTTCATGATTGAAG+TGG + Chr5:15729381-15729400 None:intergenic 35.0%
ATGGAAATCATGACTCAAAC+AGG - Chr5:15729024-15729043 MsG0580025237.01.T01:intron 35.0%
ATGGTAAAGATGAATCCGTT+AGG - Chr5:15728872-15728891 MsG0580025237.01.T01:intron 35.0%
ATGTACGTATTCTTTGTGCA+AGG - Chr5:15725450-15725469 MsG0580025237.01.T01:intron 35.0%
ATTAGTGATGCTGTTGCAAA+TGG - Chr5:15726320-15726339 MsG0580025237.01.T01:intron 35.0%
ATTGCGGCTTAATAATCTTC+GGG - Chr5:15727481-15727500 MsG0580025237.01.T01:intron 35.0%
CATCAATAGGAGTTTCGTTT+GGG + Chr5:15728389-15728408 None:intergenic 35.0%
CATTCTTTAAGCGTGCAATT+TGG + Chr5:15727998-15728017 None:intergenic 35.0%
CATTTCCATTTCCATGTGTT+AGG - Chr5:15723647-15723666 MsG0580025237.01.T01:CDS 35.0%
CTAACACATGGAAATGGAAA+TGG + Chr5:15723649-15723668 None:intergenic 35.0%
CTAATGGGATCCAAAATCAT+GGG + Chr5:15730100-15730119 None:intergenic 35.0%
CTACGTTTCATGATTGAAGT+GGG + Chr5:15729380-15729399 None:intergenic 35.0%
CTATCATAGGAAAACTGTGT+AGG - Chr5:15727713-15727732 MsG0580025237.01.T01:CDS 35.0%
CTCTGATCTGTTCTATGATT+CGG + Chr5:15728819-15728838 None:intergenic 35.0%
CTTGAAAAAAAACTCAGTGG+AGG + Chr5:15728177-15728196 None:intergenic 35.0%
GAAAGTAGAGAGAGAATATG+TGG + Chr5:15723538-15723557 None:intergenic 35.0%
GAGATCACACCAACAAATTA+AGG - Chr5:15728967-15728986 MsG0580025237.01.T01:intron 35.0%
GGATATGTTCAGCAATAAGT+GGG - Chr5:15727911-15727930 MsG0580025237.01.T01:intron 35.0%
GGTTAATTGTGCTTGGTAAA+TGG - Chr5:15725058-15725077 MsG0580025237.01.T01:CDS 35.0%
GTTGCTGAACCTTACAAAAT+TGG - Chr5:15726727-15726746 MsG0580025237.01.T01:intron 35.0%
TAAAGGAAAGCTGCACAATT+TGG + Chr5:15725352-15725371 None:intergenic 35.0%
TACAGCTGCAACATAGAAAA+AGG + Chr5:15728562-15728581 None:intergenic 35.0%
TATAGACTTGTCCAAGTTGT+AGG - Chr5:15726600-15726619 MsG0580025237.01.T01:intron 35.0%
TATTGGAAGCTGAGAAATTG+CGG - Chr5:15727465-15727484 MsG0580025237.01.T01:intron 35.0%
TCAAAAGCCAAATGGAATTG+CGG - Chr5:15724401-15724420 MsG0580025237.01.T01:intron 35.0%
TCACCATCAAAGAATATCAG+AGG - Chr5:15729565-15729584 MsG0580025237.01.T01:CDS 35.0%
TCATCAATAGGAGTTTCGTT+TGG + Chr5:15728390-15728409 None:intergenic 35.0%
TCGTTGTTAATTGTGTTTGG+TGG + Chr5:15724864-15724883 None:intergenic 35.0%
TGATAGATCATGGCATTATC+AGG - Chr5:15728513-15728532 MsG0580025237.01.T01:intron 35.0%
TGGATATGTTCAGCAATAAG+TGG - Chr5:15727910-15727929 MsG0580025237.01.T01:intron 35.0%
TGTACGTATTCTTTGTGCAA+GGG - Chr5:15725451-15725470 MsG0580025237.01.T01:intron 35.0%
TTATAAGAAAGTGGGGTTCA+AGG + Chr5:15726262-15726281 None:intergenic 35.0%
TTCAATCATGAAACGTAGTG+AGG - Chr5:15729382-15729401 MsG0580025237.01.T01:intron 35.0%
TTCATCCACTTATCTCTACA+GGG - Chr5:15728461-15728480 MsG0580025237.01.T01:intron 35.0%
TTTCATCCACTTATCTCTAC+AGG - Chr5:15728460-15728479 MsG0580025237.01.T01:intron 35.0%
TTTGTCATCCAATGCAACAT+TGG + Chr5:15728740-15728759 None:intergenic 35.0%
TTTGTGTAATAATGACCGGA+GGG - Chr5:15724770-15724789 MsG0580025237.01.T01:CDS 35.0%
! AATACTTCCACCCATGATTT+TGG - Chr5:15730087-15730106 MsG0580025237.01.T01:five_prime_UTR 35.0%
! AATGGCTGTCTTTGTTTGTA+GGG - Chr5:15727072-15727091 MsG0580025237.01.T01:CDS 35.0%
! ACCCCTGCAGAAAATAATTT+TGG - Chr5:15726290-15726309 MsG0580025237.01.T01:intron 35.0%
! ATACCATTTCCTTATTTCCC+TGG + Chr5:15725569-15725588 None:intergenic 35.0%
! ATTCACTGAGGTATTAGATG+TGG + Chr5:15726640-15726659 None:intergenic 35.0%
! ATTTTCTCCAGAATTTGGGA+TGG - Chr5:15728273-15728292 MsG0580025237.01.T01:intron 35.0%
! CGAGTCTTCATATTTTGTAG+AGG - Chr5:15726873-15726892 MsG0580025237.01.T01:CDS 35.0%
! GCAAGGGTGTATAAAAAATG+CGG - Chr5:15725467-15725486 MsG0580025237.01.T01:intron 35.0%
! GCTCCAAAATTATTTTCTGC+AGG + Chr5:15726296-15726315 None:intergenic 35.0%
! GGAGCTGTTTGTGATAATTT+TGG + Chr5:15723606-15723625 None:intergenic 35.0%
! GTTCTTGTGCCAATTTTGTA+AGG + Chr5:15726739-15726758 None:intergenic 35.0%
! TAATGGCTGTCTTTGTTTGT+AGG - Chr5:15727071-15727090 MsG0580025237.01.T01:CDS 35.0%
! TACCATTTCCTTATTTCCCT+GGG + Chr5:15725568-15725587 None:intergenic 35.0%
! TATGTGTTTCAAGTAACCAG+TGG - Chr5:15729633-15729652 MsG0580025237.01.T01:CDS 35.0%
! TCCCAAATTCTGGAGAAAAT+AGG + Chr5:15728273-15728292 None:intergenic 35.0%
! TTTATGAAAGTGGGTACTGT+AGG - Chr5:15730048-15730067 MsG0580025237.01.T01:five_prime_UTR 35.0%
! TTTTGTGTAATAATGACCGG+AGG - Chr5:15724769-15724788 MsG0580025237.01.T01:CDS 35.0%
!! ATGATCCTCCCTTAATTTGT+TGG + Chr5:15728979-15728998 None:intergenic 35.0%
!! CTCTCTCTTTTCATTTCTAG+GGG - Chr5:15724324-15724343 MsG0580025237.01.T01:intron 35.0%
!! GAGAAATTCTAAAGTTGACG+TGG - Chr5:15729598-15729617 MsG0580025237.01.T01:CDS 35.0%
!! GGGTACTGAATAATGCATAT+TGG - Chr5:15727578-15727597 MsG0580025237.01.T01:intron 35.0%
!! GTCAACTTTAGAATTTCTCG+AGG + Chr5:15729597-15729616 None:intergenic 35.0%
!! GTTTTGGTAACTAATTGTGC+AGG - Chr5:15726694-15726713 MsG0580025237.01.T01:intron 35.0%
!! TTGACATCTGCTTGTTGTAA+CGG + Chr5:15729542-15729561 None:intergenic 35.0%
!!! ATCTTGATTATTTTGGGCAC+AGG + Chr5:15726424-15726443 None:intergenic 35.0%
!!! GCAGAAAATAATTTTGGAGC+AGG - Chr5:15726296-15726315 MsG0580025237.01.T01:intron 35.0%
AACAGCCTATTGCTCTCTTT+AGG - Chr5:15728712-15728731 MsG0580025237.01.T01:intron 40.0%
AACGAAATGCAAACACGAGT+TGG - Chr5:15729771-15729790 MsG0580025237.01.T01:five_prime_UTR 40.0%
AAGAACATCACCACTTAAGC+TGG - Chr5:15729206-15729225 MsG0580025237.01.T01:intron 40.0%
ACAATCAAAGCCGGAAACAT+CGG - Chr5:15723804-15723823 MsG0580025237.01.T01:intron 40.0%
ACATGGAAATGGAAATGGAC+TGG + Chr5:15723644-15723663 None:intergenic 40.0%
ACGAAATGCAAACACGAGTT+GGG - Chr5:15729772-15729791 MsG0580025237.01.T01:five_prime_UTR 40.0%
AGAACATCACCACTTAAGCT+GGG - Chr5:15729207-15729226 MsG0580025237.01.T01:intron 40.0%
AGGAATGAGTGAGTGCTAAT+CGG + Chr5:15725269-15725288 None:intergenic 40.0%
ATGACAGCGAGAACTACTTT+CGG + Chr5:15723968-15723987 None:intergenic 40.0%
ATTTAACCATATGCTCCCTC+CGG + Chr5:15724788-15724807 None:intergenic 40.0%
CAATTGCTTGGATACCACAT+CGG - Chr5:15729163-15729182 MsG0580025237.01.T01:intron 40.0%
CAGATAGTGAAGACAACTCA+GGG - Chr5:15729093-15729112 MsG0580025237.01.T01:intron 40.0%
CTATGTTGCAGCTGTATAAG+TGG - Chr5:15728566-15728585 MsG0580025237.01.T01:intron 40.0%
CTGTAGTAACTCCAAGCTTT+GGG - Chr5:15729846-15729865 MsG0580025237.01.T01:five_prime_UTR 40.0%
CTGTATAAGTGGAATGCAAG+TGG - Chr5:15728577-15728596 MsG0580025237.01.T01:intron 40.0%
CTTCATAACCTCACTGTTCT+CGG + Chr5:15723993-15724012 None:intergenic 40.0%
GAAGAGATCTCTATCAAGCT+AGG + Chr5:15723565-15723584 None:intergenic 40.0%
GAGGGTTTAGCGATTAAGAA+TGG - Chr5:15724147-15724166 MsG0580025237.01.T01:CDS 40.0%
GAGTCAGATGGCAATAAACA+AGG - Chr5:15728139-15728158 MsG0580025237.01.T01:intron 40.0%
GATAGACGAGATTTCGAATC+AGG - Chr5:15726810-15726829 MsG0580025237.01.T01:CDS 40.0%
GATCACTTCCGTATCTTGTT+TGG + Chr5:15729877-15729896 None:intergenic 40.0%
GCAGCTACTAAATTCTTCAG+AGG - Chr5:15728030-15728049 MsG0580025237.01.T01:intron 40.0%
GCTCCTCTGATATTCTTTGA+TGG + Chr5:15729571-15729590 None:intergenic 40.0%
GCTTTCAAAGAGATTGACTG+TGG - Chr5:15726991-15727010 MsG0580025237.01.T01:intron 40.0%
GTTTGCTTCATTTGCTTCGA+CGG - Chr5:15724091-15724110 MsG0580025237.01.T01:CDS 40.0%
TAATCATCTGCAAACTCCCA+TGG + Chr5:15726912-15726931 None:intergenic 40.0%
TAATTGTGCAGGTACAAGCA+AGG - Chr5:15726705-15726724 MsG0580025237.01.T01:intron 40.0%
TAGTGAAAGGATTCACGAGA+AGG - Chr5:15726521-15726540 MsG0580025237.01.T01:CDS 40.0%
TATGAGTCTGATGAAGATGC+TGG - Chr5:15728115-15728134 MsG0580025237.01.T01:intron 40.0%
TCACACCAACAAATTAAGGG+AGG - Chr5:15728971-15728990 MsG0580025237.01.T01:intron 40.0%
TCAGATAGTGAAGACAACTC+AGG - Chr5:15729092-15729111 MsG0580025237.01.T01:intron 40.0%
TCTGTAGTAACTCCAAGCTT+TGG - Chr5:15729845-15729864 MsG0580025237.01.T01:five_prime_UTR 40.0%
TCTTCCGTTCAAAAGCCAAA+TGG - Chr5:15724393-15724412 MsG0580025237.01.T01:intron 40.0%
TCTTCCTTCTTGATCTGCTT+CGG + Chr5:15724064-15724083 None:intergenic 40.0%
TGATGCTGTTGCAAATGGAA+AGG - Chr5:15726325-15726344 MsG0580025237.01.T01:intron 40.0%
TGTAGTAACTCCAAGCTTTG+GGG - Chr5:15729847-15729866 MsG0580025237.01.T01:five_prime_UTR 40.0%
TGTATTCTCAATTGGGTCAC+TGG + Chr5:15728343-15728362 None:intergenic 40.0%
TTAAGCGTGCAATTTGGTCA+AGG + Chr5:15727992-15728011 None:intergenic 40.0%
TTGTGGGAAGTTTGAACCAT+AGG + Chr5:15725891-15725910 None:intergenic 40.0%
TTGTTTGGAAAAGCTCGTCT+TGG - Chr5:15726215-15726234 MsG0580025237.01.T01:intron 40.0%
TTTAGGAGCCAATGTTGCAT+TGG - Chr5:15728729-15728748 MsG0580025237.01.T01:intron 40.0%
TTTCAGATCTTTGGCAGAAG+TGG - Chr5:15729322-15729341 MsG0580025237.01.T01:intron 40.0%
TTTGCTTGAGTGCAAGAGAT+GGG - Chr5:15726030-15726049 MsG0580025237.01.T01:intron 40.0%
! AAAGTGGGTACTGTAGGAAA+GGG - Chr5:15730054-15730073 MsG0580025237.01.T01:five_prime_UTR 40.0%
! ACTTTCTTTTTGCGCTGTTC+AGG - Chr5:15725376-15725395 MsG0580025237.01.T01:intron 40.0%
! ATTTGGGATGGTGTCTTCAA+CGG - Chr5:15728285-15728304 MsG0580025237.01.T01:intron 40.0%
! CATGGAAATGGAAATGGACT+GGG + Chr5:15723643-15723662 None:intergenic 40.0%
! CTTTTACCTGCATCAAGCAT+TGG + Chr5:15729458-15729477 None:intergenic 40.0%
! GGTTAAATTAGTTCGGTGGA+TGG - Chr5:15724800-15724819 MsG0580025237.01.T01:CDS 40.0%
! GTCTGACTGATGATAGTGAA+AGG - Chr5:15726508-15726527 MsG0580025237.01.T01:CDS 40.0%
! TAGAAGTGTGTACATGTGAC+TGG + Chr5:15728915-15728934 None:intergenic 40.0%
!! AATTGAGTTGAGTTTGCGTG+AGG + Chr5:15723692-15723711 None:intergenic 40.0%
!! ATCCTCCATACTTTGAGATC+TGG + Chr5:15728613-15728632 None:intergenic 40.0%
!! ATTGAGTTGAGTTTGCGTGA+GGG + Chr5:15723691-15723710 None:intergenic 40.0%
!! CAAAGTACCGCAATTCCATT+TGG + Chr5:15724411-15724430 None:intergenic 40.0%
!! TCCATACTTTGAGATCTGGA+GGG + Chr5:15728609-15728628 None:intergenic 40.0%
!!! AGGTTGTTGGTTCTTTTGTG+CGG - Chr5:15726541-15726560 MsG0580025237.01.T01:intron 40.0%
!!! TCAATGGGTTTTTAGCTCGA+AGG + Chr5:15725857-15725876 None:intergenic 40.0%
AAAGAAAGCAGTCAGGATGG+TGG - Chr5:15728757-15728776 MsG0580025237.01.T01:intron 45.0%
AAGAAAGCAGTCAGGATGGT+GGG - Chr5:15728758-15728777 MsG0580025237.01.T01:intron 45.0%
AATAGGCTGTTGTTCCGCAA+TGG + Chr5:15728703-15728722 None:intergenic 45.0%
AATCCGTTAGGAGCAATGGA+TGG - Chr5:15728884-15728903 MsG0580025237.01.T01:intron 45.0%
ACTACGTGGCAGGCTATTAT+AGG - Chr5:15729273-15729292 MsG0580025237.01.T01:CDS 45.0%
AGACAACTCAGGGCAATCTT+CGG - Chr5:15729103-15729122 MsG0580025237.01.T01:intron 45.0%
AGGAGTCAAGTGTCTTCCAT+GGG - Chr5:15726893-15726912 MsG0580025237.01.T01:CDS 45.0%
AGGAGTTCTCCGAGGTAAAT+AGG - Chr5:15726830-15726849 MsG0580025237.01.T01:CDS 45.0%
AGGATTCACGAGAAGGTTGT+TGG - Chr5:15726528-15726547 MsG0580025237.01.T01:CDS 45.0%
AGGGAACCAGGTTTAGTTAG+AGG - Chr5:15729937-15729956 MsG0580025237.01.T01:five_prime_UTR 45.0%
ATAGTAACACCCACGCATCT+AGG + Chr5:15727697-15727716 None:intergenic 45.0%
ATCAAGTTCCCCTTCAGTCT+TGG + Chr5:15725676-15725695 None:intergenic 45.0%
ATCTCAATCTACAGCAGCAG+AGG - Chr5:15729514-15729533 MsG0580025237.01.T01:CDS 45.0%
ATGCCATCCATTGCTCCTAA+CGG + Chr5:15728890-15728909 None:intergenic 45.0%
ATGGGATCCAAAATCATGGG+TGG + Chr5:15730097-15730116 None:intergenic 45.0%
ATGGTGTCTTCAACGGTGTT+GGG - Chr5:15728292-15728311 MsG0580025237.01.T01:intron 45.0%
ATTACAAACTCGCTGCCCTT+TGG + Chr5:15730028-15730047 None:intergenic 45.0%
ATTTCGATGACAAGAGCAGC+TGG - Chr5:15725766-15725785 MsG0580025237.01.T01:intron 45.0%
CATACTCCAGCAAGAGATTC+TGG + Chr5:15726128-15726147 None:intergenic 45.0%
CATGACTCAAACAGGACTTC+TGG - Chr5:15729032-15729051 MsG0580025237.01.T01:intron 45.0%
CCATTACCAACACCAAATGG+CGG + Chr5:15729985-15730004 None:intergenic 45.0%
CCTCCATTACCAACACCAAA+TGG + Chr5:15729988-15730007 None:intergenic 45.0%
CGAAATGCAAACACGAGTTG+GGG - Chr5:15729773-15729792 MsG0580025237.01.T01:five_prime_UTR 45.0%
CGATGTGGTATCCAAGCAAT+TGG + Chr5:15729165-15729184 None:intergenic 45.0%
CGTAGTGAGGAATTGACTGA+TGG - Chr5:15729395-15729414 MsG0580025237.01.T01:intron 45.0%
CTATCGATATGACCTCCTTC+CGG + Chr5:15726795-15726814 None:intergenic 45.0%
CTCCAGATCTCAAAGTATGG+AGG - Chr5:15728608-15728627 MsG0580025237.01.T01:intron 45.0%
CTCTGTGTACCAAGACTGAA+GGG - Chr5:15725664-15725683 MsG0580025237.01.T01:intron 45.0%
CTGTTCCGATGTGAACATGA+CGG - Chr5:15723916-15723935 MsG0580025237.01.T01:CDS 45.0%
CTTAGTCCAATGCTTGATGC+AGG - Chr5:15729449-15729468 MsG0580025237.01.T01:intron 45.0%
CTTGCATTCATCCTGGACAT+AGG + Chr5:15726945-15726964 None:intergenic 45.0%
CTTTGCTTGAGTGCAAGAGA+TGG - Chr5:15726029-15726048 MsG0580025237.01.T01:intron 45.0%
GAAGACACCATCCCAAATTC+TGG + Chr5:15728283-15728302 None:intergenic 45.0%
GACAAAGAAAGCAGTCAGGA+TGG - Chr5:15728754-15728773 MsG0580025237.01.T01:intron 45.0%
GACTGGGTTCAGATGTAAGA+AGG + Chr5:15723627-15723646 None:intergenic 45.0%
GAGGTTATGAAGAAGAAGCG+CGG - Chr5:15724001-15724020 MsG0580025237.01.T01:CDS 45.0%
GATACTTCGACCCAGTCTAA+TGG - Chr5:15728853-15728872 MsG0580025237.01.T01:intron 45.0%
GATGAATCCGTTAGGAGCAA+TGG - Chr5:15728880-15728899 MsG0580025237.01.T01:intron 45.0%
GCAATCCCTGTAGAGATAAG+TGG + Chr5:15728469-15728488 None:intergenic 45.0%
GGATGACAAAGAAAGCAGTC+AGG - Chr5:15728750-15728769 MsG0580025237.01.T01:intron 45.0%
GGCATTATCAGGATCCATCT+GGG - Chr5:15728524-15728543 MsG0580025237.01.T01:intron 45.0%
GGGGATAGCCAAACAAGATA+CGG - Chr5:15729866-15729885 MsG0580025237.01.T01:five_prime_UTR 45.0%
GTGCGGATAAGAATCTCTAG+TGG - Chr5:15726558-15726577 MsG0580025237.01.T01:intron 45.0%
GTGGGTATGTGCATGTTAGT+TGG - Chr5:15727929-15727948 MsG0580025237.01.T01:intron 45.0%
GTTGTCCTAAGCGTATCATC+CGG - Chr5:15724346-15724365 MsG0580025237.01.T01:intron 45.0%
TAGTTGCATTGCATGCTGGA+GGG + Chr5:15729257-15729276 None:intergenic 45.0%
TCCCTCCAGATCTCAAAGTA+TGG - Chr5:15728605-15728624 MsG0580025237.01.T01:intron 45.0%
TCTCTCCGTCATGTTCACAT+CGG + Chr5:15723924-15723943 None:intergenic 45.0%
TCTCTGTGTACCAAGACTGA+AGG - Chr5:15725663-15725682 MsG0580025237.01.T01:intron 45.0%
TCTGGTGGTCAGAGTAATAG+TGG - Chr5:15729050-15729069 MsG0580025237.01.T01:intron 45.0%
TCTGTGTACCAAGACTGAAG+GGG - Chr5:15725665-15725684 MsG0580025237.01.T01:intron 45.0%
TGATGTCCAGAATCTCTTGC+TGG - Chr5:15726119-15726138 MsG0580025237.01.T01:intron 45.0%
TGCCCAGGGAAATAAGGAAA+TGG - Chr5:15725563-15725582 MsG0580025237.01.T01:intron 45.0%
TGCTGTTGCAAATGGAAAGG+AGG - Chr5:15726328-15726347 MsG0580025237.01.T01:intron 45.0%
TGGCATTATCAGGATCCATC+TGG - Chr5:15728523-15728542 MsG0580025237.01.T01:intron 45.0%
TGGCTCCTAAAGAGAGCAAT+AGG + Chr5:15728720-15728739 None:intergenic 45.0%
TGTACACTCTGACCCCAATT+TGG - Chr5:15728084-15728103 MsG0580025237.01.T01:intron 45.0%
TTACAAACTCGCTGCCCTTT+GGG + Chr5:15730027-15730046 None:intergenic 45.0%
TTATCAGGATCCATCTGGGA+AGG - Chr5:15728528-15728547 MsG0580025237.01.T01:intron 45.0%
TTCAAGTAACCAGTGGAGTC+AGG - Chr5:15729640-15729659 MsG0580025237.01.T01:CDS 45.0%
TTCCAATCCAAGTCTCCAAG+TGG + Chr5:15729720-15729739 None:intergenic 45.0%
TTGCACGCTTAAAGAATGCG+TGG - Chr5:15728000-15728019 MsG0580025237.01.T01:intron 45.0%
TTTCGATGACAAGAGCAGCT+GGG - Chr5:15725767-15725786 MsG0580025237.01.T01:intron 45.0%
! AAGTGGGTACTGTAGGAAAG+GGG - Chr5:15730055-15730074 MsG0580025237.01.T01:five_prime_UTR 45.0%
! ACGGTGATATAAGCACTGTC+AGG + Chr5:15728217-15728236 None:intergenic 45.0%
! ATTTTCTGTGCCCAGAGATC+GGG - Chr5:15729898-15729917 MsG0580025237.01.T01:five_prime_UTR 45.0%
! GAAAGTACACACCTGGAATG+GGG - Chr5:15729737-15729756 MsG0580025237.01.T01:five_prime_UTR 45.0%
! GAAAGTGGGTACTGTAGGAA+AGG - Chr5:15730053-15730072 MsG0580025237.01.T01:five_prime_UTR 45.0%
! GATTTTCTGTGCCCAGAGAT+CGG - Chr5:15729897-15729916 MsG0580025237.01.T01:five_prime_UTR 45.0%
! GCTCCAAAAATGTGCCATTG+CGG - Chr5:15728686-15728705 MsG0580025237.01.T01:intron 45.0%
! GGAAAGTACACACCTGGAAT+GGG - Chr5:15729736-15729755 MsG0580025237.01.T01:five_prime_UTR 45.0%
! GTTCCGCAATGGCACATTTT+TGG + Chr5:15728692-15728711 None:intergenic 45.0%
! TCTTTTTGCGCTGTTCAGGT+TGG - Chr5:15725380-15725399 MsG0580025237.01.T01:intron 45.0%
! TGGAAAGTACACACCTGGAA+TGG - Chr5:15729735-15729754 MsG0580025237.01.T01:five_prime_UTR 45.0%
! TGGATTGGAAAGTACACACC+TGG - Chr5:15729730-15729749 MsG0580025237.01.T01:five_prime_UTR 45.0%
! TTTTCCAGCCACTGCAACAT+TGG - Chr5:15729680-15729699 MsG0580025237.01.T01:CDS 45.0%
!! AGAAGTGTCTAGTGTTGCAG+TGG - Chr5:15728434-15728453 MsG0580025237.01.T01:intron 45.0%
!! CCATTTGGTGTTGGTAATGG+AGG - Chr5:15729985-15730004 MsG0580025237.01.T01:five_prime_UTR 45.0%
!! CTCCATACTTTGAGATCTGG+AGG + Chr5:15728610-15728629 None:intergenic 45.0%
!! TCATGGGTGGAAGTATTCAC+AGG + Chr5:15730084-15730103 None:intergenic 45.0%
!! TGCGTGGGTGTTACTATCAT+AGG - Chr5:15727700-15727719 MsG0580025237.01.T01:intron 45.0%
!!! CAGCTGGGAGTATCTTTTCA+AGG - Chr5:15725782-15725801 MsG0580025237.01.T01:intron 45.0%
!!! GCTACTTTTACAGTGTGACG+TGG - Chr5:15725743-15725762 MsG0580025237.01.T01:intron 45.0%
!!! TAAATTTTAATAGTTTATTT+TGG - Chr5:15725321-15725340 MsG0580025237.01.T01:CDS 5.0%
!!! TTAAAATTTAAAACAAATAT+AGG + Chr5:15725311-15725330 None:intergenic 5.0%
AAGAAGCCTAAGGGACCTTC+AGG - Chr5:15725989-15726008 MsG0580025237.01.T01:intron 50.0%
ACTTTCGGAGTTCCTTTCGC+CGG + Chr5:15724031-15724050 None:intergenic 50.0%
AGTTGCATTGCATGCTGGAG+GGG + Chr5:15729256-15729275 None:intergenic 50.0%
ATCGCTAAACCCTCACTCAC+CGG + Chr5:15724141-15724160 None:intergenic 50.0%
ATGCAATGCAACTACGTGGC+AGG - Chr5:15729263-15729282 MsG0580025237.01.T01:CDS 50.0%
ATTAGCAGTGCCTAGATGCG+TGG - Chr5:15727684-15727703 MsG0580025237.01.T01:intron 50.0%
CAACTGCAACGGAGACAGTT+CGG - Chr5:15723827-15723846 MsG0580025237.01.T01:intron 50.0%
CACCACTTGGAGACTTGGAT+TGG - Chr5:15729715-15729734 MsG0580025237.01.T01:exon 50.0%
CACGTAGTTGCATTGCATGC+TGG + Chr5:15729261-15729280 None:intergenic 50.0%
CAGATCTTTGGCAGAAGTGG+AGG - Chr5:15729325-15729344 MsG0580025237.01.T01:intron 50.0%
CAGCATGCAATGCAACTACG+TGG - Chr5:15729259-15729278 MsG0580025237.01.T01:CDS 50.0%
CAGTCATGCCAATGTTGCAG+TGG + Chr5:15729691-15729710 None:intergenic 50.0%
CGGGATAGAGCAAGTGAGAA+GGG - Chr5:15727500-15727519 MsG0580025237.01.T01:intron 50.0%
CGTATAGACCTCTGCCCAAA+GGG - Chr5:15730010-15730029 MsG0580025237.01.T01:five_prime_UTR 50.0%
CTCAGAAACATGAGCCGATG+TGG + Chr5:15729180-15729199 None:intergenic 50.0%
CTGATTGAGAACAGTGCCCA+GGG - Chr5:15725549-15725568 MsG0580025237.01.T01:intron 50.0%
GAACAGTGCCCAGGGAAATA+AGG - Chr5:15725557-15725576 MsG0580025237.01.T01:intron 50.0%
GAAGATGCTGGAGAGTCAGA+TGG - Chr5:15728127-15728146 MsG0580025237.01.T01:intron 50.0%
GACTCAAACAGGACTTCTGG+TGG - Chr5:15729035-15729054 MsG0580025237.01.T01:intron 50.0%
GAGGAGTCAAGTGTCTTCCA+TGG - Chr5:15726892-15726911 MsG0580025237.01.T01:CDS 50.0%
GAGTTGGGGAGTAGGACATA+CGG - Chr5:15729787-15729806 MsG0580025237.01.T01:five_prime_UTR 50.0%
GATCCATCTGGGAAGGTTCA+AGG - Chr5:15728535-15728554 MsG0580025237.01.T01:intron 50.0%
GATGGTGTCTTCAACGGTGT+TGG - Chr5:15728291-15728310 MsG0580025237.01.T01:intron 50.0%
GCAATCGCTTGCATTCATCC+TGG + Chr5:15726952-15726971 None:intergenic 50.0%
GCATGACTGTAGACACCACT+TGG - Chr5:15729702-15729721 MsG0580025237.01.T01:exon 50.0%
GCTCTGCCTCTAACTAAACC+TGG + Chr5:15729946-15729965 None:intergenic 50.0%
GGAAACATCGGCAACTGCAA+CGG - Chr5:15723816-15723835 MsG0580025237.01.T01:intron 50.0%
GTAGACACCACTTGGAGACT+TGG - Chr5:15729710-15729729 MsG0580025237.01.T01:exon 50.0%
GTAGTTGCATTGCATGCTGG+AGG + Chr5:15729258-15729277 None:intergenic 50.0%
GTGCAAGAGATGGGCATCAA+AGG - Chr5:15726039-15726058 MsG0580025237.01.T01:intron 50.0%
GTTGCAGTTGCCGATGTTTC+CGG + Chr5:15723817-15723836 None:intergenic 50.0%
GTTTGGCTATCCCCAAAGCT+TGG + Chr5:15729860-15729879 None:intergenic 50.0%
TCCTTCTTGATCTGCTTCGG+CGG + Chr5:15724061-15724080 None:intergenic 50.0%
TCGGGATAGAGCAAGTGAGA+AGG - Chr5:15727499-15727518 MsG0580025237.01.T01:intron 50.0%
TCGTATAGACCTCTGCCCAA+AGG - Chr5:15730009-15730028 MsG0580025237.01.T01:five_prime_UTR 50.0%
TGCTTCATTTGCTTCGACGG+TGG - Chr5:15724094-15724113 MsG0580025237.01.T01:CDS 50.0%
TTAGCAGTGCCTAGATGCGT+GGG - Chr5:15727685-15727704 MsG0580025237.01.T01:intron 50.0%
TTCGAATCAGGAGTTCTCCG+AGG - Chr5:15726822-15726841 MsG0580025237.01.T01:CDS 50.0%
TTGGGGTCAGAGTGTACATC+TGG + Chr5:15728082-15728101 None:intergenic 50.0%
TTTGGCAGAAGTGGAGGCAA+TGG - Chr5:15729331-15729350 MsG0580025237.01.T01:intron 50.0%
! AATGGAATCGCTTGGTGGCT+TGG - Chr5:15729349-15729368 MsG0580025237.01.T01:intron 50.0%
! ACGCATCTAGGCACTGCTAA+TGG + Chr5:15727685-15727704 None:intergenic 50.0%
! GCAAGTTGAAGTTCCGACGA+AGG - Chr5:15723893-15723912 MsG0580025237.01.T01:CDS 50.0%
! GTGAACATGACGGAGAGAGA+CGG - Chr5:15723926-15723945 MsG0580025237.01.T01:CDS 50.0%
! TAATGACCGGAGGGAGCATA+TGG - Chr5:15724779-15724798 MsG0580025237.01.T01:CDS 50.0%
! TGGTGTCTTCAACGGTGTTG+GGG - Chr5:15728293-15728312 MsG0580025237.01.T01:intron 50.0%
! TTTTCTGTGCCCAGAGATCG+GGG - Chr5:15729899-15729918 MsG0580025237.01.T01:five_prime_UTR 50.0%
!! CCGCCATTTGGTGTTGGTAA+TGG - Chr5:15729982-15730001 MsG0580025237.01.T01:five_prime_UTR 50.0%
AAGCCTAAGGGACCTTCAGG+CGG - Chr5:15725992-15726011 MsG0580025237.01.T01:intron 55.0%
ACACCTGGAATGGGGAGGAA+TGG - Chr5:15729745-15729764 MsG0580025237.01.T01:five_prime_UTR 55.0%
ACACGCCGGATGATACGCTT+AGG + Chr5:15724354-15724373 None:intergenic 55.0%
ACCAGGAAACCCCGATCTCT+GGG + Chr5:15729911-15729930 None:intergenic 55.0%
AGACAGTTCGGCGACAGTTC+CGG - Chr5:15723839-15723858 MsG0580025237.01.T01:CDS 55.0%
AGATCGGGGTTTCCTGGTCA+TGG - Chr5:15729913-15729932 MsG0580025237.01.T01:five_prime_UTR 55.0%
AGTACACACCTGGAATGGGG+AGG - Chr5:15729740-15729759 MsG0580025237.01.T01:five_prime_UTR 55.0%
ATAGGAGCAGCAGCGCTCAA+TGG + Chr5:15725873-15725892 None:intergenic 55.0%
ATTGCATGCTGGAGGGGAAG+GGG + Chr5:15729250-15729269 None:intergenic 55.0%
CACATCGGAACAGCCTTCGT+CGG + Chr5:15723909-15723928 None:intergenic 55.0%
CATGCCAATGTTGCAGTGGC+TGG + Chr5:15729687-15729706 None:intergenic 55.0%
CATTGCATGCTGGAGGGGAA+GGG + Chr5:15729251-15729270 None:intergenic 55.0%
CTACTTGCGGCGAAGTCTGA+TGG - Chr5:15726482-15726501 MsG0580025237.01.T01:intron 55.0%
CTCAATTGGGTCACTGGCAG+TGG + Chr5:15728337-15728356 None:intergenic 55.0%
GAGAGACGGCGGTTGTTGTA+CGG - Chr5:15723940-15723959 MsG0580025237.01.T01:CDS 55.0%
GAGGCAATGGAATCGCTTGG+TGG - Chr5:15729344-15729363 MsG0580025237.01.T01:intron 55.0%
GATCCATTCCTCCCCATTCC+AGG + Chr5:15729751-15729770 None:intergenic 55.0%
GCTGATTGAGAACAGTGCCC+AGG - Chr5:15725548-15725567 MsG0580025237.01.T01:intron 55.0%
GGCAATCTTCGGCACAAAGC+TGG - Chr5:15729114-15729133 MsG0580025237.01.T01:intron 55.0%
GGGGTTTCCTGGTCATGGTA+GGG - Chr5:15729918-15729937 MsG0580025237.01.T01:five_prime_UTR 55.0%
GGTCCTTGAACCTTCCCAGA+TGG + Chr5:15728541-15728560 None:intergenic 55.0%
GTAACCAGTGGAGTCAGGCT+CGG - Chr5:15729645-15729664 MsG0580025237.01.T01:CDS 55.0%
GTGGAGGCAATGGAATCGCT+TGG - Chr5:15729341-15729360 MsG0580025237.01.T01:intron 55.0%
TAGGAGCAGCAGCGCTCAAT+GGG + Chr5:15725872-15725891 None:intergenic 55.0%
TAGTTAGAGGCAGAGCTGCG+TGG - Chr5:15729950-15729969 MsG0580025237.01.T01:five_prime_UTR 55.0%
TCATCTCGCTTGACACACGC+CGG + Chr5:15724368-15724387 None:intergenic 55.0%
TCCGCCGAAGCAGATCAAGA+AGG - Chr5:15724057-15724076 MsG0580025237.01.T01:CDS 55.0%
TGGAACAGGCAACCGCCATT+TGG - Chr5:15729970-15729989 MsG0580025237.01.T01:five_prime_UTR 55.0%
TGTCATCGCCGAGAACAGTG+AGG - Chr5:15723982-15724001 MsG0580025237.01.T01:CDS 55.0%
TTCTTGATCTGCTTCGGCGG+AGG + Chr5:15724058-15724077 None:intergenic 55.0%
! AACATGACGGAGAGAGACGG+CGG - Chr5:15723929-15723948 MsG0580025237.01.T01:CDS 55.0%
! ACGGTGTTGGGGGAAGAACA+CGG - Chr5:15728304-15728323 MsG0580025237.01.T01:intron 55.0%
! ATTGAGCGCTGCTGCTCCTA+TGG - Chr5:15725872-15725891 MsG0580025237.01.T01:intron 55.0%
! GCAAACACGAGTTGGGGAGT+AGG - Chr5:15729779-15729798 MsG0580025237.01.T01:five_prime_UTR 55.0%
! GGTGTCTTCAACGGTGTTGG+GGG - Chr5:15728294-15728313 MsG0580025237.01.T01:intron 55.0%
! TTCGGCGGAGGAGCTACTTT+CGG + Chr5:15724046-15724065 None:intergenic 55.0%
! TTTTCCGAGCCTGACTCCAC+TGG + Chr5:15729652-15729671 None:intergenic 55.0%
!! AAAGCAGTCAGGATGGTGGG+AGG - Chr5:15728761-15728780 MsG0580025237.01.T01:intron 55.0%
!! AGGCAACCGCCATTTGGTGT+TGG - Chr5:15729976-15729995 MsG0580025237.01.T01:five_prime_UTR 55.0%
CCTGGTCATGGTAGGGAACC+AGG - Chr5:15729925-15729944 MsG0580025237.01.T01:five_prime_UTR 60.0%
CCTGGTTCCCTACCATGACC+AGG + Chr5:15729928-15729947 None:intergenic 60.0%
CGGGGTTTCCTGGTCATGGT+AGG - Chr5:15729917-15729936 MsG0580025237.01.T01:five_prime_UTR 60.0%
GACAGTTCCGGTGGCCGTTA+CGG - Chr5:15723851-15723870 MsG0580025237.01.T01:CDS 60.0%
GACCAGGAAACCCCGATCTC+TGG + Chr5:15729912-15729931 None:intergenic 60.0%
GCATTGCATGCTGGAGGGGA+AGG + Chr5:15729252-15729271 None:intergenic 60.0%
GTCTCGTTCTCTGCGATCGC+CGG - Chr5:15724119-15724138 MsG0580025237.01.T01:CDS 60.0%
TCACCGCCTGAAGGTCCCTT+AGG + Chr5:15725998-15726017 None:intergenic 60.0%
TTGCATGCTGGAGGGGAAGG+GGG + Chr5:15729249-15729268 None:intergenic 60.0%
! AACTTGCTTCGTCTCCGCCG+CGG + Chr5:15723880-15723899 None:intergenic 60.0%
! CGGTGTTGGGGGAAGAACAC+GGG - Chr5:15728305-15728324 MsG0580025237.01.T01:intron 60.0%
! GAAGAAGAAGCGCGGTCGTC+CGG - Chr5:15724009-15724028 MsG0580025237.01.T01:CDS 60.0%
ACACCCGTGTCACCGCCTGA+AGG + Chr5:15726007-15726026 None:intergenic 65.0%
ACTCGCTGCCCTTTGGGCAG+AGG + Chr5:15730021-15730040 None:intergenic 65.0%
ATGCTGGAGGGGAAGGGGGT+TGG + Chr5:15729245-15729264 None:intergenic 65.0%
CAGTTCGGCGACAGTTCCGG+TGG - Chr5:15723842-15723861 MsG0580025237.01.T01:CDS 65.0%
CTGCGATCGCCGGTGAGTGA+GGG - Chr5:15724129-15724148 MsG0580025237.01.T01:CDS 65.0%
GAGGCAGAGCTGCGTGGAAC+AGG - Chr5:15729956-15729975 MsG0580025237.01.T01:five_prime_UTR 65.0%
GCCCAGAGATCGGGGTTTCC+TGG - Chr5:15729907-15729926 MsG0580025237.01.T01:five_prime_UTR 65.0%
GGACCTTCAGGCGGTGACAC+GGG - Chr5:15726001-15726020 MsG0580025237.01.T01:intron 65.0%
GGGACCTTCAGGCGGTGACA+CGG - Chr5:15726000-15726019 MsG0580025237.01.T01:intron 65.0%
TCTGCGATCGCCGGTGAGTG+AGG - Chr5:15724128-15724147 MsG0580025237.01.T01:CDS 65.0%
AAGCGCGGTCGTCCGGCGAA+AGG - Chr5:15724016-15724035 MsG0580025237.01.T01:CDS 70.0%
CTCCGCCGCGGTCTCCGTAA+CGG + Chr5:15723868-15723887 None:intergenic 70.0%
GCGGTCTCCGTAACGGCCAC+CGG + Chr5:15723861-15723880 None:intergenic 70.0%
GGTGGCCGTTACGGAGACCG+CGG - Chr5:15723860-15723879 MsG0580025237.01.T01:CDS 70.0%
GGCCGTTACGGAGACCGCGG+CGG - Chr5:15723863-15723882 MsG0580025237.01.T01:CDS 75.0%
Chromosome Type Strat End Strand Name
Chr5 gene 15723529 15730119 15723529 ID=MsG0580025237.01;Name=MsG0580025237.01
Chr5 mRNA 15723529 15730119 15723529 ID=MsG0580025237.01.T01;Parent=MsG0580025237.01;Name=MsG0580025237.01.T01;_AED=0.48;_eAED=0.48;_QI=403|0.41|0.38|1|1|1|13|0|749
Chr5 exon 15723529 15723735 15723529 ID=MsG0580025237.01.T01:exon:3246;Parent=MsG0580025237.01.T01
Chr5 exon 15723837 15724326 15723837 ID=MsG0580025237.01.T01:exon:3245;Parent=MsG0580025237.01.T01
Chr5 exon 15724734 15725166 15724734 ID=MsG0580025237.01.T01:exon:3244;Parent=MsG0580025237.01.T01
Chr5 exon 15725237 15725389 15725237 ID=MsG0580025237.01.T01:exon:3243;Parent=MsG0580025237.01.T01
Chr5 exon 15725488 15725527 15725488 ID=MsG0580025237.01.T01:exon:3242;Parent=MsG0580025237.01.T01
Chr5 exon 15726505 15726555 15726505 ID=MsG0580025237.01.T01:exon:3241;Parent=MsG0580025237.01.T01
Chr5 exon 15726636 15726695 15726636 ID=MsG0580025237.01.T01:exon:3240;Parent=MsG0580025237.01.T01
Chr5 exon 15726805 15726932 15726805 ID=MsG0580025237.01.T01:exon:3239;Parent=MsG0580025237.01.T01
Chr5 exon 15727027 15727139 15727027 ID=MsG0580025237.01.T01:exon:3238;Parent=MsG0580025237.01.T01
Chr5 exon 15727225 15727330 15727225 ID=MsG0580025237.01.T01:exon:3237;Parent=MsG0580025237.01.T01
Chr5 exon 15727712 15727892 15727712 ID=MsG0580025237.01.T01:exon:3236;Parent=MsG0580025237.01.T01
Chr5 exon 15729226 15729304 15729226 ID=MsG0580025237.01.T01:exon:3235;Parent=MsG0580025237.01.T01
Chr5 exon 15729508 15730119 15729508 ID=MsG0580025237.01.T01:exon:3234;Parent=MsG0580025237.01.T01
Chr5 five_prime_UTR 15729717 15730119 15729717 ID=MsG0580025237.01.T01:five_prime_utr;Parent=MsG0580025237.01.T01
Chr5 CDS 15729508 15729716 15729508 ID=MsG0580025237.01.T01:cds;Parent=MsG0580025237.01.T01
Chr5 CDS 15729226 15729304 15729226 ID=MsG0580025237.01.T01:cds;Parent=MsG0580025237.01.T01
Chr5 CDS 15727712 15727892 15727712 ID=MsG0580025237.01.T01:cds;Parent=MsG0580025237.01.T01
Chr5 CDS 15727225 15727330 15727225 ID=MsG0580025237.01.T01:cds;Parent=MsG0580025237.01.T01
Chr5 CDS 15727027 15727139 15727027 ID=MsG0580025237.01.T01:cds;Parent=MsG0580025237.01.T01
Chr5 CDS 15726805 15726932 15726805 ID=MsG0580025237.01.T01:cds;Parent=MsG0580025237.01.T01
Chr5 CDS 15726636 15726695 15726636 ID=MsG0580025237.01.T01:cds;Parent=MsG0580025237.01.T01
Chr5 CDS 15726505 15726555 15726505 ID=MsG0580025237.01.T01:cds;Parent=MsG0580025237.01.T01
Chr5 CDS 15725488 15725527 15725488 ID=MsG0580025237.01.T01:cds;Parent=MsG0580025237.01.T01
Chr5 CDS 15725237 15725389 15725237 ID=MsG0580025237.01.T01:cds;Parent=MsG0580025237.01.T01
Chr5 CDS 15724734 15725166 15724734 ID=MsG0580025237.01.T01:cds;Parent=MsG0580025237.01.T01
Chr5 CDS 15723837 15724326 15723837 ID=MsG0580025237.01.T01:cds;Parent=MsG0580025237.01.T01
Chr5 CDS 15723529 15723735 15723529 ID=MsG0580025237.01.T01:cds;Parent=MsG0580025237.01.T01
Gene Sequence

>MsG0580025237.01.T01

ATGACGGAGAGAGACGGCGGTTGTTGTACGGCGCCGAAAGTAGTTCTCGCTGTCATCGCCGAGAACAGTGAGGTTATGAAGAAGAAGCGCGGTCGTCCGGCGAAAGGAACTCCGAAAGTAGCTCCTCCGCCGAAGCAGATCAAGAAGGAAGATGAAGATGTTTGCTTCATTTGCTTCGACGGTGGAAGTCTCGTTCTCTGCGATCGCCGGGGTTGTCCTAAGCGTATCATCCGGCGTGTGTCAAGCGAGATGAAGCGTTCTTCCGTTCAAAAGCCAAATGGAATTGCGTGTGACGTGGATTTCGATGACAAGAGCAGCTGGGAGTATCTTTTCAAGGTGTATTGGACATTATTGAAAGAGAATCTATCTTTAACGTTTGATGAGCTCCTTCGAGCTAAAAACCCATTGAGCGCTGCTGCTCCTATGGTTCAAACTTCCCACAAACTTTACCATCTTAAAGATGAAAAAGGAATTAGTGATGCTGTTGCAAATGGAAAGGAGGCTATTGACAGTAACAATAAACAGTCAGTATTAGTCAATGATAAGAGATGCACAAGTAAAAAGGCTGACAGCCTTCTGACTGATGATAGTGAAAGGATTCACGAGAAGGTTGTTGGTTCTTTTGTGCGGATAAGAATCTCTAGTGGTGATCAGAAACAAGATATGTATAGACTTGTCCAAGTTGTAGGTACAAGCAAGGTTGCTGAACCTTACAAAATTGGCACAAGAACGACTGACATTAAGCTTGAAATTTTAAATTTAAACCGGAAGGAGGTCATATCGATAGACGAGATTTCGAATCAGGAGTTCTCCGAGGATGAATGCAAGCGATTGCGTCAAAGTATAAAGTATGGGCTTTCAAAGAGATTGACTGTGGGAGAGATTCTGAACAAAGCGCTCACATTTCAAGAAATTAGAGTCAATGATTCTGATGAAGATGCTGGAGAGTCAGATGGCAATAAACAAGATGGCAATATACCTATTTTCTCCAGAATTTGGGATGGTGTCTTCAACGGTGTTGGGGGAAGAACACGGGACTTGACCACTGCCAGTGACCCAATTGAGAATACATGCTTACTAAAGAAGCATATCAACCCAAACGAAACTCCTATTGATGATAGGATTGCGCAGCCATTTGATGATTTTATGAATGATAGATCATGGCATTATCAGGATCCATCTGGGAAGGTTCAAGGACCTTTTTCTATGTTGCAGCTGTATAAGTGGAATGCAAGTGGACATTTCCCTCCAGATCTCAAAGTATGGAGGATAGATGAGAAACAAGTAAACTCTATATTGTTAACTGATGCACTTAATGGGAAGTGCTCCAAAAATGTGCCATTGCGGAACAACAGCCTATTGCTCTCTTTAGGAGCCAATGTTGCATTGGATGACAAAGAAAGCAGTCAGGATGGTGGGAGGAATTCAACAACGAATGAAATTTCTGCAGATAGCCGAATCATAGAACAGATCAGAGAACAAAAAGTGGATGATACTTCGACCCAGTCTAATGGTAAAGATGAATCCGTTAGGAGCAATGGATGGCATGACCATTTCAGATCTTTGGCAGAAGTGGAGGCAATGGAATCGCTTGGTGGCTTGGAATCTCCCACTTCAATCATGAAACGTAGTGAGGAATTGACTGATGGTTCTAAAAATCTTTGTCTCAGTTTTGCAGAGCTTAGTCCAATGCTTGATGCAGGTAAAAGCGATGCATTGAGCTCCACATGTGATTTACAGTTACTATCTCAATCTACAGCAGCAGAGGAACCGTTACAACAAGCAGATGTCAATCATCACCATCAAAGAATATCAGAGGAGCTTTCCTCGAGAAATTCTAAAGTTGACGTGGGTTCAAAGAACATATGTGTTTCAAGTAACCAGTGGAGTCAGGCTCGGAAAATTCTTCTATTTTCCAGCCACTGCAACATTGGCATGACTGTAGACACCACTTGGAGACTTGGATTGGAAAGTACACACCTGGAATGGGGAGGAATGGATCAACGAAATGCAAACACGAGTTGGGGAGTAGGACATACGGCAAGATCGGGGTTTCCTGGTCATGGTAGGGAACCAGGTTTAGTTAGAGGCAGAGCTGCGTGGAACAGGCAACCGCCATTTGGTGTTGGTAATGGAGGCTCGTATAGACCTCTGCCCAAAGGGCAGCGAGTTTGTAATTTTATGAAAGTGGGTACTGTAGGAAAGGGGCATCCTGTGAATACTTCCACCCATGATTTTGGATCCCATTAG

Protein sequence

>MsG0580025237.01.T01

MTERDGGCCTAPKVVLAVIAENSEVMKKKRGRPAKGTPKVAPPPKQIKKEDEDVCFICFDGGSLVLCDRRGCPKRIIRRVSSEMKRSSVQKPNGIACDVDFDDKSSWEYLFKVYWTLLKENLSLTFDELLRAKNPLSAAAPMVQTSHKLYHLKDEKGISDAVANGKEAIDSNNKQSVLVNDKRCTSKKADSLLTDDSERIHEKVVGSFVRIRISSGDQKQDMYRLVQVVGTSKVAEPYKIGTRTTDIKLEILNLNRKEVISIDEISNQEFSEDECKRLRQSIKYGLSKRLTVGEILNKALTFQEIRVNDSDEDAGESDGNKQDGNIPIFSRIWDGVFNGVGGRTRDLTTASDPIENTCLLKKHINPNETPIDDRIAQPFDDFMNDRSWHYQDPSGKVQGPFSMLQLYKWNASGHFPPDLKVWRIDEKQVNSILLTDALNGKCSKNVPLRNNSLLLSLGANVALDDKESSQDGGRNSTTNEISADSRIIEQIREQKVDDTSTQSNGKDESVRSNGWHDHFRSLAEVEAMESLGGLESPTSIMKRSEELTDGSKNLCLSFAELSPMLDAGKSDALSSTCDLQLLSQSTAAEEPLQQADVNHHHQRISEELSSRNSKVDVGSKNICVSSNQWSQARKILLFSSHCNIGMTVDTTWRLGLESTHLEWGGMDQRNANTSWGVGHTARSGFPGHGREPGLVRGRAAWNRQPPFGVGNGGSYRPLPKGQRVCNFMKVGTVGKGHPVNTSTHDFGSH*