Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480022818.01.T01 | XP_013457378.2 | 98.466 | 326 | 5 | 0 | 1 | 326 | 357 | 682 | 0 | 661 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480022818.01.T01 | Q8GY23 | 73.065 | 323 | 75 | 2 | 1 | 323 | 352 | 662 | 3.99E-141 | 444 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480022818.01.T01 | A0A072UNN4 | 98.466 | 326 | 5 | 0 | 1 | 326 | 357 | 682 | 0.0 | 661 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180003413.01 | MsG0480022818.01 | 0.831875 | 1.302505e-55 | 1.432058e-52 |
| MsG0180004519.01 | MsG0480022818.01 | 0.819457 | 1.149961e-52 | 8.854347e-50 |
| MsG0180004520.01 | MsG0480022818.01 | 0.823773 | 1.156322e-53 | 1.005229e-50 |
| MsG0180005168.01 | MsG0480022818.01 | 0.866076 | 3.714517e-65 | 1.235926e-61 |
| MsG0180006233.01 | MsG0480022818.01 | 0.894242 | 2.964161e-75 | 2.922706e-71 |
| MsG0480022800.01 | MsG0480022818.01 | 0.870991 | 9.597956e-67 | 3.808902e-63 |
| MsG0480022815.01 | MsG0480022818.01 | 0.917302 | 6.268170e-86 | 1.797854e-81 |
| MsG0480022816.01 | MsG0480022818.01 | 0.809629 | 1.721383e-50 | 1.015916e-47 |
| MsG0480022818.01 | MsG0580024532.01 | 0.823234 | 1.545793e-53 | 1.323317e-50 |
| MsG0480022818.01 | MsG0580024612.01 | 0.814888 | 1.225039e-51 | 8.319643e-49 |
| MsG0480022818.01 | MsG0780036017.01 | 0.805249 | 1.462388e-49 | 7.699023e-47 |
| MsG0480022818.01 | MsG0780036689.01 | 0.906589 | 1.263087e-80 | 2.154244e-76 |
| MsG0480022818.01 | MsG0780041241.01 | 0.844753 | 6.218793e-59 | 1.014006e-55 |
| MsG0480022818.01 | MsG0780041398.01 | 0.807391 | 5.171328e-50 | 2.876892e-47 |
| MsG0480022818.01 | MsG0880045840.01 | 0.876367 | 1.477766e-68 | 7.144971e-65 |
| MsG0480022818.01 | MsG0880046798.01 | 0.807727 | 4.389720e-50 | 2.463456e-47 |
| MsG0480022818.01 | MsG0880046990.01 | 0.812681 | 3.751377e-51 | 2.400487e-48 |
| MsG0480022818.01 | MsG0880047217.01 | 0.880015 | 7.769352e-70 | 4.308207e-66 |
| MsG0480022818.01 | MsG0880047219.01 | 0.866098 | 3.655037e-65 | 1.217231e-61 |
| MsG0380017374.01 | MsG0480022818.01 | 0.825287 | 5.089845e-54 | 4.619498e-51 |
| MsG0380017984.01 | MsG0480022818.01 | 0.802656 | 5.059250e-49 | 2.491970e-46 |
| MsG0280007825.01 | MsG0480022818.01 | 0.836975 | 6.828981e-57 | 8.746402e-54 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480022818.01.T01 | MTR_4g094708 | 98.466 | 326 | 5 | 0 | 1 | 326 | 357 | 682 | 0.0 | 661 |
| MsG0480022818.01.T01 | MTR_4g094705 | 90.881 | 329 | 30 | 0 | 1 | 329 | 358 | 686 | 0.0 | 608 |
| MsG0480022818.01.T01 | MTR_5g066710 | 43.000 | 300 | 147 | 5 | 19 | 314 | 422 | 701 | 1.20e-63 | 218 |
| MsG0480022818.01.T01 | MTR_3g099777 | 42.000 | 300 | 150 | 5 | 19 | 314 | 444 | 723 | 5.73e-62 | 214 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480022818.01.T01 | AT1G55860 | 73.065 | 323 | 75 | 2 | 1 | 323 | 352 | 662 | 4.06e-142 | 444 |
| MsG0480022818.01.T01 | AT1G70320 | 72.840 | 324 | 76 | 3 | 1 | 323 | 352 | 664 | 7.73e-141 | 441 |
Find 63 sgRNAs with CRISPR-Local
Find 78 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCTGCATTGTTCAGAGATT+TGG | 0.223543 | 4:+77062365 | MsG0480022818.01.T01:CDS |
| TTCAGGCGAGCAAAAGATTT+TGG | 0.223733 | 4:+77062684 | MsG0480022818.01.T01:CDS |
| TCTGGAAACCATCTCAAAAT+TGG | 0.233242 | 4:+77063079 | MsG0480022818.01.T01:CDS |
| ACATATTTGCGTGCTCTTAC+AGG | 0.245479 | 4:+77062963 | MsG0480022818.01.T01:CDS |
| GGATATGTTAGTTGAGATTC+TGG | 0.281985 | 4:+77063061 | MsG0480022818.01.T01:CDS |
| CTCCGGTGATAAGAAATTAA+AGG | 0.327958 | 4:-77062546 | None:intergenic |
| ATCAATTATAGCATCCAAAA+AGG | 0.328954 | 4:-77062805 | None:intergenic |
| GGAAATACTACTCGTATATA+TGG | 0.330033 | 4:+77062621 | MsG0480022818.01.T01:CDS |
| GCTGCATTGTTCAGAGATTT+GGG | 0.343483 | 4:+77062366 | MsG0480022818.01.T01:CDS |
| CTTAAACAGTAACGGCCTTC+AGG | 0.366391 | 4:+77062887 | MsG0480022818.01.T01:CDS |
| GCTGCTTCGTTACGTGGGCC+TGG | 0.394997 | 4:+77063035 | MsG0480022818.01.T01:CDS |
| GAAGTCTCCCATGTTGAAAA+TGG | 0.400067 | 4:+77062423 | MsG0480022818.01.T01:CDS |
| TTTATCTCTTGTAACTGTGT+TGG | 0.400347 | 4:+77062191 | MsG0480022818.01.T01:CDS |
| AGTCCAGCTGCGTCTAAAAC+GGG | 0.402917 | 4:-77062774 | None:intergenic |
| TATATACGAGTAGTATTTCC+AGG | 0.405152 | 4:-77062618 | None:intergenic |
| TGGTTGGAGGTTCTTCAGTT+TGG | 0.409660 | 4:+77062493 | MsG0480022818.01.T01:CDS |
| TTATTATTGATACATCAAAA+TGG | 0.423114 | 4:+77062145 | MsG0480022818.01.T01:CDS |
| AAGAGCACGCAAATATGTTC+TGG | 0.438853 | 4:-77062958 | None:intergenic |
| GTCTAGTAGAAGTGCACATA+TGG | 0.442558 | 4:+77062473 | MsG0480022818.01.T01:CDS |
| AACCTTTAATTTCTTATCAC+CGG | 0.448588 | 4:+77062544 | MsG0480022818.01.T01:CDS |
| TTATTGCGTGCTATATCCCT+TGG | 0.453155 | 4:+77062585 | MsG0480022818.01.T01:CDS |
| TCTCTGAACAATGCAGCAGC+TGG | 0.453969 | 4:-77062360 | None:intergenic |
| AAGTCCAGCTGCGTCTAAAA+CGG | 0.455690 | 4:-77062775 | None:intergenic |
| TGAAAGATAGAAATTCTTTG+AGG | 0.457778 | 4:+77062913 | MsG0480022818.01.T01:CDS |
| CATATTTGCGTGCTCTTACA+GGG | 0.460381 | 4:+77062964 | MsG0480022818.01.T01:CDS |
| AGCATAAAGCATCCAAACAC+TGG | 0.464705 | 4:-77062866 | None:intergenic |
| GTGTTGGTTTCGTCATCGTC+AGG | 0.468497 | 4:+77062207 | MsG0480022818.01.T01:CDS |
| AAATCCACAGCACTTGCATC+TGG | 0.469906 | 4:+77062290 | MsG0480022818.01.T01:CDS |
| CGCCACGCTGCTTCGTTACG+TGG | 0.470138 | 4:+77063029 | MsG0480022818.01.T01:CDS |
| TGTTCTGCCATGCGTGAAGC+AGG | 0.474796 | 4:+77062231 | MsG0480022818.01.T01:CDS |
| TCCCTTGGAACCTATGCCCC+TGG | 0.504369 | 4:+77062600 | MsG0480022818.01.T01:CDS |
| ATCAATAATAACAAAGTCGA+TGG | 0.512053 | 4:-77062133 | None:intergenic |
| TTCCAGGGGCATAGGTTCCA+AGG | 0.514262 | 4:-77062602 | None:intergenic |
| CATTAATTCATCTAGTCCGC+TGG | 0.519273 | 4:-77063006 | None:intergenic |
| AGTAGTATTTCCAGGGGCAT+AGG | 0.521451 | 4:-77062610 | None:intergenic |
| TTCTATCTTTCACAGCCTGA+AGG | 0.537447 | 4:-77062902 | None:intergenic |
| ATATTTGCGTGCTCTTACAG+GGG | 0.539684 | 4:+77062965 | MsG0480022818.01.T01:CDS |
| AGTAGAAGTGCACATATGGT+TGG | 0.543624 | 4:+77062477 | MsG0480022818.01.T01:CDS |
| TTCAGTAGAGGTAGAAGAGT+AGG | 0.553901 | 4:-77062261 | None:intergenic |
| GCTTTATGCTTAAACAGTAA+CGG | 0.558496 | 4:+77062879 | MsG0480022818.01.T01:CDS |
| GCATAAAGCATCCAAACACT+GGG | 0.565842 | 4:-77062865 | None:intergenic |
| TCTAAAACGGGGAAACAAGT+AGG | 0.570833 | 4:-77062762 | None:intergenic |
| AAGCTTTCATCAGCAATCTC+CGG | 0.571737 | 4:-77062563 | None:intergenic |
| TTCGTTACGTGGGCCTGGAG+TGG | 0.573690 | 4:+77063040 | MsG0480022818.01.T01:CDS |
| AGAAGTGCACATATGGTTGG+AGG | 0.579984 | 4:+77062480 | MsG0480022818.01.T01:CDS |
| TCAACCAGATGCAAGTGCTG+TGG | 0.588295 | 4:-77062294 | None:intergenic |
| AATGAATCCTGCTTCACGCA+TGG | 0.593407 | 4:-77062238 | None:intergenic |
| TTCAATCTTCAATCGAGAGA+TGG | 0.595643 | 4:-77062403 | None:intergenic |
| TCAACTAACATATCCACTCC+AGG | 0.597590 | 4:-77063053 | None:intergenic |
| GCCACGCTGCTTCGTTACGT+GGG | 0.602980 | 4:+77063030 | MsG0480022818.01.T01:CDS |
| GTCTCCCATGTTGAAAATGG+TGG | 0.603177 | 4:+77062426 | MsG0480022818.01.T01:CDS |
| TCCAGGGGCATAGGTTCCAA+GGG | 0.604431 | 4:-77062601 | None:intergenic |
| GGATTTATATCTTTCAGTAG+AGG | 0.610621 | 4:-77062273 | None:intergenic |
| ATATACGAGTAGTATTTCCA+GGG | 0.622101 | 4:-77062617 | None:intergenic |
| ATTAAAGGTTCAGTGTACAA+TGG | 0.628036 | 4:-77062531 | None:intergenic |
| ACACTTGCATCTTTATCCAG+CGG | 0.651030 | 4:+77062990 | MsG0480022818.01.T01:CDS |
| GTCCAGCTGCGTCTAAAACG+GGG | 0.658265 | 4:-77062773 | None:intergenic |
| GCATTGTTCAGAGATTTGGG+TGG | 0.693825 | 4:+77062369 | MsG0480022818.01.T01:CDS |
| TATACGAGTAGTATTTCCAG+GGG | 0.715668 | 4:-77062616 | None:intergenic |
| CATAAAGCATCCAAACACTG+GGG | 0.731214 | 4:-77062864 | None:intergenic |
| ATAAAGCATCCAAACACTGG+GGG | 0.734762 | 4:-77062863 | None:intergenic |
| GCCCACGTAACGAAGCAGCG+TGG | 0.741403 | 4:-77063031 | None:intergenic |
| AAAATTATACATAAGCACTG+AGG | 0.755923 | 4:-77062663 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATTATTGATACATCAAAA+TGG | + | Chr4:77062145-77062164 | MsG0480022818.01.T01:CDS | 15.0% |
| ! | ATCAATAATAACAAAGTCGA+TGG | - | Chr4:77062136-77062155 | None:intergenic | 25.0% |
| ! | ATCAATTATAGCATCCAAAA+AGG | - | Chr4:77062808-77062827 | None:intergenic | 25.0% |
| ! | TGAAAGATAGAAATTCTTTG+AGG | + | Chr4:77062913-77062932 | MsG0480022818.01.T01:CDS | 25.0% |
| !! | AAAATTATACATAAGCACTG+AGG | - | Chr4:77062666-77062685 | None:intergenic | 25.0% |
| !! | AACCTTTAATTTCTTATCAC+CGG | + | Chr4:77062544-77062563 | MsG0480022818.01.T01:CDS | 25.0% |
| !! | AGTGCTTATGTATAATTTTC+AGG | + | Chr4:77062667-77062686 | MsG0480022818.01.T01:CDS | 25.0% |
| !! | CTTTTTGTATTAAATCACTC+AGG | - | Chr4:77062740-77062759 | None:intergenic | 25.0% |
| ATATACGAGTAGTATTTCCA+GGG | - | Chr4:77062620-77062639 | None:intergenic | 30.0% | |
| ATTAAAGGTTCAGTGTACAA+TGG | - | Chr4:77062534-77062553 | None:intergenic | 30.0% | |
| GCTTTATGCTTAAACAGTAA+CGG | + | Chr4:77062879-77062898 | MsG0480022818.01.T01:CDS | 30.0% | |
| GGAAATACTACTCGTATATA+TGG | + | Chr4:77062621-77062640 | MsG0480022818.01.T01:CDS | 30.0% | |
| GGATTTATATCTTTCAGTAG+AGG | - | Chr4:77062276-77062295 | None:intergenic | 30.0% | |
| TATATACGAGTAGTATTTCC+AGG | - | Chr4:77062621-77062640 | None:intergenic | 30.0% | |
| TTTATCTCTTGTAACTGTGT+TGG | + | Chr4:77062191-77062210 | MsG0480022818.01.T01:CDS | 30.0% | |
| CTCCGGTGATAAGAAATTAA+AGG | - | Chr4:77062549-77062568 | None:intergenic | 35.0% | |
| GGATATGTTAGTTGAGATTC+TGG | + | Chr4:77063061-77063080 | MsG0480022818.01.T01:CDS | 35.0% | |
| TATACGAGTAGTATTTCCAG+GGG | - | Chr4:77062619-77062638 | None:intergenic | 35.0% | |
| TCTGGAAACCATCTCAAAAT+TGG | + | Chr4:77063079-77063098 | MsG0480022818.01.T01:CDS | 35.0% | |
| TTCAATCTTCAATCGAGAGA+TGG | - | Chr4:77062406-77062425 | None:intergenic | 35.0% | |
| ! | ATGGTCAGTTCATTTTGTTG+AGG | + | Chr4:77062164-77062183 | MsG0480022818.01.T01:CDS | 35.0% |
| ! | CTAGACTCAGAATTTTCATC+TGG | - | Chr4:77062459-77062478 | None:intergenic | 35.0% |
| ! | CTTTCCACCATTTTCAACAT+GGG | - | Chr4:77062433-77062452 | None:intergenic | 35.0% |
| !! | GCGCATTTTAGAAGCTTTTA+TGG | + | Chr4:77062326-77062345 | MsG0480022818.01.T01:CDS | 35.0% |
| AAGCTTTCATCAGCAATCTC+CGG | - | Chr4:77062566-77062585 | None:intergenic | 40.0% | |
| ACACTTGCATCTTTATCCAG+CGG | + | Chr4:77062990-77063009 | MsG0480022818.01.T01:CDS | 40.0% | |
| ACATATTTGCGTGCTCTTAC+AGG | + | Chr4:77062963-77062982 | MsG0480022818.01.T01:CDS | 40.0% | |
| ATAGCATCCAAAAAGGCAGA+TGG | - | Chr4:77062801-77062820 | None:intergenic | 40.0% | |
| ATATTTGCGTGCTCTTACAG+GGG | + | Chr4:77062965-77062984 | MsG0480022818.01.T01:CDS | 40.0% | |
| CATATTTGCGTGCTCTTACA+GGG | + | Chr4:77062964-77062983 | MsG0480022818.01.T01:CDS | 40.0% | |
| CATTAATTCATCTAGTCCGC+TGG | - | Chr4:77063009-77063028 | None:intergenic | 40.0% | |
| GAAGTCTCCCATGTTGAAAA+TGG | + | Chr4:77062423-77062442 | MsG0480022818.01.T01:CDS | 40.0% | |
| GCTGCATTGTTCAGAGATTT+GGG | + | Chr4:77062366-77062385 | MsG0480022818.01.T01:CDS | 40.0% | |
| TCAACTAACATATCCACTCC+AGG | - | Chr4:77063056-77063075 | None:intergenic | 40.0% | |
| TGCTGCATTGTTCAGAGATT+TGG | + | Chr4:77062365-77062384 | MsG0480022818.01.T01:CDS | 40.0% | |
| TTATTGCGTGCTATATCCCT+TGG | + | Chr4:77062585-77062604 | MsG0480022818.01.T01:CDS | 40.0% | |
| TTCAGTAGAGGTAGAAGAGT+AGG | - | Chr4:77062264-77062283 | None:intergenic | 40.0% | |
| TTCTATCTTTCACAGCCTGA+AGG | - | Chr4:77062905-77062924 | None:intergenic | 40.0% | |
| ! | AAGAGCACGCAAATATGTTC+TGG | - | Chr4:77062961-77062980 | None:intergenic | 40.0% |
| ! | AGCATAAAGCATCCAAACAC+TGG | - | Chr4:77062869-77062888 | None:intergenic | 40.0% |
| ! | AGTAGAAGTGCACATATGGT+TGG | + | Chr4:77062477-77062496 | MsG0480022818.01.T01:CDS | 40.0% |
| ! | ATAAAGCATCCAAACACTGG+GGG | - | Chr4:77062866-77062885 | None:intergenic | 40.0% |
| ! | CATAAAGCATCCAAACACTG+GGG | - | Chr4:77062867-77062886 | None:intergenic | 40.0% |
| ! | GCATAAAGCATCCAAACACT+GGG | - | Chr4:77062868-77062887 | None:intergenic | 40.0% |
| ! | GCTTTCCACCATTTTCAACA+TGG | - | Chr4:77062434-77062453 | None:intergenic | 40.0% |
| ! | GTCTAGTAGAAGTGCACATA+TGG | + | Chr4:77062473-77062492 | MsG0480022818.01.T01:CDS | 40.0% |
| ! | TCTAAAACGGGGAAACAAGT+AGG | - | Chr4:77062765-77062784 | None:intergenic | 40.0% |
| ! | TTCAGGCGAGCAAAAGATTT+TGG | + | Chr4:77062684-77062703 | MsG0480022818.01.T01:CDS | 40.0% |
| !! | TGGCAGAACCAATTTTGAGA+TGG | - | Chr4:77063090-77063109 | None:intergenic | 40.0% |
| AAATCCACAGCACTTGCATC+TGG | + | Chr4:77062290-77062309 | MsG0480022818.01.T01:CDS | 45.0% | |
| AAGTCCAGCTGCGTCTAAAA+CGG | - | Chr4:77062778-77062797 | None:intergenic | 45.0% | |
| AATGAATCCTGCTTCACGCA+TGG | - | Chr4:77062241-77062260 | None:intergenic | 45.0% | |
| CTTAAACAGTAACGGCCTTC+AGG | + | Chr4:77062887-77062906 | MsG0480022818.01.T01:CDS | 45.0% | |
| GCATTGTTCAGAGATTTGGG+TGG | + | Chr4:77062369-77062388 | MsG0480022818.01.T01:CDS | 45.0% | |
| GTCTCCCATGTTGAAAATGG+TGG | + | Chr4:77062426-77062445 | MsG0480022818.01.T01:CDS | 45.0% | |
| TGGTTGGAGGTTCTTCAGTT+TGG | + | Chr4:77062493-77062512 | MsG0480022818.01.T01:CDS | 45.0% | |
| ! | AGAAGTGCACATATGGTTGG+AGG | + | Chr4:77062480-77062499 | MsG0480022818.01.T01:CDS | 45.0% |
| ! | AGGCGAGCAAAAGATTTTGG+TGG | + | Chr4:77062687-77062706 | MsG0480022818.01.T01:CDS | 45.0% |
| ! | AGTAGTATTTCCAGGGGCAT+AGG | - | Chr4:77062613-77062632 | None:intergenic | 45.0% |
| ! | TGGACTTCCATCTGCCTTTT+TGG | + | Chr4:77062791-77062810 | MsG0480022818.01.T01:CDS | 45.0% |
| !! | CGAGCAAAAGATTTTGGTGG+TGG | + | Chr4:77062690-77062709 | MsG0480022818.01.T01:CDS | 45.0% |
| ACACTGGGGGATGCATGTAA+TGG | - | Chr4:77062853-77062872 | None:intergenic | 50.0% | |
| TACATGCATCCCCCAGTGTT+TGG | + | Chr4:77062854-77062873 | MsG0480022818.01.T01:CDS | 50.0% | |
| TCTCTGAACAATGCAGCAGC+TGG | - | Chr4:77062363-77062382 | None:intergenic | 50.0% | |
| ! | AGTCCAGCTGCGTCTAAAAC+GGG | - | Chr4:77062777-77062796 | None:intergenic | 50.0% |
| ! | TCAACCAGATGCAAGTGCTG+TGG | - | Chr4:77062297-77062316 | None:intergenic | 50.0% |
| !! | GTGTTGGTTTCGTCATCGTC+AGG | + | Chr4:77062207-77062226 | MsG0480022818.01.T01:CDS | 50.0% |
| TGTTCTGCCATGCGTGAAGC+AGG | + | Chr4:77062231-77062250 | MsG0480022818.01.T01:CDS | 55.0% | |
| ! | GTCCAGCTGCGTCTAAAACG+GGG | - | Chr4:77062776-77062795 | None:intergenic | 55.0% |
| ! | TCCAGGGGCATAGGTTCCAA+GGG | - | Chr4:77062604-77062623 | None:intergenic | 55.0% |
| ! | TTCCAGGGGCATAGGTTCCA+AGG | - | Chr4:77062605-77062624 | None:intergenic | 55.0% |
| !! | TTCCCCGTTTTAGACGCAGC+TGG | + | Chr4:77062771-77062790 | MsG0480022818.01.T01:CDS | 55.0% |
| GCCACGCTGCTTCGTTACGT+GGG | + | Chr4:77063030-77063049 | MsG0480022818.01.T01:CDS | 60.0% | |
| TCCCTTGGAACCTATGCCCC+TGG | + | Chr4:77062600-77062619 | MsG0480022818.01.T01:CDS | 60.0% | |
| TTCGTTACGTGGGCCTGGAG+TGG | + | Chr4:77063040-77063059 | MsG0480022818.01.T01:CDS | 60.0% | |
| CGCCACGCTGCTTCGTTACG+TGG | + | Chr4:77063029-77063048 | MsG0480022818.01.T01:CDS | 65.0% | |
| GCCCACGTAACGAAGCAGCG+TGG | - | Chr4:77063034-77063053 | None:intergenic | 65.0% | |
| GCTGCTTCGTTACGTGGGCC+TGG | + | Chr4:77063035-77063054 | MsG0480022818.01.T01:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr4 | gene | 77062123 | 77063112 | 77062123 | ID=MsG0480022818.01;Name=MsG0480022818.01 |
| Chr4 | mRNA | 77062123 | 77063112 | 77062123 | ID=MsG0480022818.01.T01;Parent=MsG0480022818.01;Name=MsG0480022818.01.T01;_AED=0.48;_eAED=0.74;_QI=0|0|0|1|1|1|4|0|329 |
| Chr4 | exon | 77062123 | 77063112 | 77062123 | ID=MsG0480022818.01.T01:exon:19904;Parent=MsG0480022818.01.T01 |
| Chr4 | CDS | 77062123 | 77063112 | 77062123 | ID=MsG0480022818.01.T01:cds;Parent=MsG0480022818.01.T01 |
| Gene Sequence |
| Protein sequence |
