AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480022947.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480022947.01.T01 MTR_8g080860 61.092 293 93 3 7 299 13 284 3.91e-111 325
MsG0480022947.01.T01 MTR_8g080860 61.092 293 93 3 7 299 9 280 4.79e-111 325
MsG0480022947.01.T01 MTR_8g095240 53.401 294 120 5 13 290 3 295 1.46e-83 259
MsG0480022947.01.T01 MTR_8g095240 46.575 292 105 3 14 272 50 323 1.04e-67 219
MsG0480022947.01.T01 MTR_8g095240 46.825 252 117 4 57 292 1 251 1.68e-52 179
MsG0480022947.01.T01 MTR_8g095240 50.000 220 94 4 13 216 118 337 8.63e-52 177
MsG0480022947.01.T01 MTR_8g095240 50.667 150 73 1 12 160 173 322 6.64e-37 137
MsG0480022947.01.T01 MTR_8g092090 49.242 264 100 3 8 271 3 232 8.48e-74 228
MsG0480022947.01.T01 MTR_8g092090 47.660 235 94 4 76 302 2 215 2.50e-56 184
MsG0480022947.01.T01 MTR_8g080310 68.000 175 38 1 51 225 1 157 1.60e-71 219
MsG0480022947.01.T01 MTR_8g080310 64.865 148 52 0 12 159 8 155 2.17e-58 186
MsG0480022947.01.T01 MTR_8g080310 56.818 176 57 2 97 272 1 157 4.28e-54 175
MsG0480022947.01.T01 MTR_8g080310 63.359 131 47 1 161 291 1 130 1.83e-45 152
MsG0480022947.01.T01 MTR_8g080310 54.808 104 47 0 12 115 54 157 6.08e-29 109
MsG0480022947.01.T01 MTR_4g107460 47.547 265 119 3 8 271 3 248 1.82e-68 218
MsG0480022947.01.T01 MTR_4g107460 46.957 230 102 3 62 290 11 221 3.13e-55 184
MsG0480022947.01.T01 MTR_4g107460 43.787 169 89 1 16 178 104 272 7.74e-37 135
MsG0480022947.01.T01 MTR_4g107460 46.471 170 84 3 129 292 9 177 2.01e-36 134
MsG0480022947.01.T01 MTR_4g107460 38.211 123 53 2 192 291 8 130 1.57e-15 77.0
MsG0480022947.01.T01 MTR_2g078470 36.396 283 174 2 14 291 79 360 1.88e-56 188
MsG0480022947.01.T01 MTR_2g078470 38.062 289 173 2 8 291 4 291 1.52e-52 178
MsG0480022947.01.T01 MTR_2g078470 34.529 223 141 1 14 231 148 370 4.92e-38 139
MsG0480022947.01.T01 MTR_2g078470 40.397 151 90 0 12 162 215 365 8.97e-29 114
MsG0480022947.01.T01 MTR_2g078470 48.864 88 45 0 14 101 286 373 2.58e-18 85.5
MsG0480022947.01.T01 MTR_6g043150 35.669 314 173 3 6 291 2 314 1.14e-53 179
MsG0480022947.01.T01 MTR_6g043150 38.956 249 146 2 14 257 79 326 4.36e-48 165
MsG0480022947.01.T01 MTR_6g043150 31.492 181 78 1 12 146 146 326 6.46e-16 77.8
MsG0480022947.01.T01 MTR_8g080340 54.819 166 46 3 7 167 13 154 1.90e-47 158
MsG0480022947.01.T01 MTR_8g080340 46.053 152 63 2 82 233 19 151 1.89e-33 122
MsG0480022947.01.T01 MTR_8g080340 49.286 140 68 2 163 302 35 171 2.92e-31 116
MsG0480022947.01.T01 MTR_8g080340 56.842 95 40 1 197 291 23 116 4.32e-26 102
MsG0480022947.01.T01 MTR_8g080340 36.441 118 74 1 174 291 23 139 2.44e-15 73.6
MsG0480022947.01.T01 MTR_8g088930 43.333 210 112 3 8 210 7 216 6.60e-47 169
MsG0480022947.01.T01 MTR_8g088930 42.079 202 98 3 59 260 12 194 1.45e-36 139
MsG0480022947.01.T01 MTR_8g088930 44.118 170 89 2 128 292 12 180 5.20e-34 132
MsG0480022947.01.T01 MTR_8g088930 43.333 210 112 3 8 210 7 216 7.01e-47 168
MsG0480022947.01.T01 MTR_8g088930 42.500 200 96 3 59 258 12 192 1.56e-36 139
MsG0480022947.01.T01 MTR_8g088930 44.118 170 89 2 128 292 12 180 5.59e-34 132
MsG0480022947.01.T01 MTR_8g088930 43.333 210 112 3 8 210 7 216 1.03e-46 169
MsG0480022947.01.T01 MTR_8g088930 42.500 200 96 3 59 258 12 192 1.10e-36 140
MsG0480022947.01.T01 MTR_8g088930 44.118 170 89 2 128 292 12 180 5.16e-34 132
MsG0480022947.01.T01 MTR_8g088930 43.333 210 112 3 8 210 7 216 1.07e-46 169
MsG0480022947.01.T01 MTR_8g088930 42.500 200 96 3 59 258 12 192 1.11e-36 140
MsG0480022947.01.T01 MTR_8g088930 44.118 170 89 2 128 292 12 180 5.42e-34 132
MsG0480022947.01.T01 MTR_8g092410 44.715 246 90 7 18 218 32 276 1.88e-45 159
MsG0480022947.01.T01 MTR_8g092410 36.555 238 103 9 87 290 32 255 9.00e-24 100
MsG0480022947.01.T01 MTR_8g092410 37.500 128 54 2 12 113 154 281 6.44e-12 66.2
MsG0480022947.01.T01 MTR_8g092410 30.270 185 113 4 133 312 32 205 3.99e-11 63.9
MsG0480022947.01.T01 MTR_5g010840 32.787 305 178 3 13 317 111 388 4.87e-45 159
MsG0480022947.01.T01 MTR_8g080350 37.308 260 117 6 41 257 86 342 1.31e-41 149
MsG0480022947.01.T01 MTR_8g080350 34.818 247 117 4 87 291 86 330 8.25e-35 131
MsG0480022947.01.T01 MTR_8g080350 35.455 220 114 3 13 208 125 340 1.15e-32 125
MsG0480022947.01.T01 MTR_5g058920 40.000 200 102 1 3 202 186 367 4.98e-36 135
MsG0480022947.01.T01 MTR_5g058920 36.408 206 105 3 54 252 184 370 2.33e-28 114
MsG0480022947.01.T01 MTR_5g058920 37.500 176 104 2 119 289 187 361 1.10e-27 112
MsG0480022947.01.T01 MTR_5g058920 39.231 130 78 1 162 291 189 317 1.76e-17 83.6
MsG0480022947.01.T01 MTR_5g058920 44.944 89 48 1 203 291 184 271 1.35e-12 68.6
MsG0480022947.01.T01 MTR_5g058920 38.462 91 56 0 8 98 283 373 2.09e-11 65.1
MsG0480022947.01.T01 MTR_3g023310 50.746 134 52 2 29 162 11 130 4.92e-33 121
MsG0480022947.01.T01 MTR_3g023310 41.892 148 55 2 74 221 10 126 5.35e-25 99.8
MsG0480022947.01.T01 MTR_3g023310 44.295 149 51 2 120 268 10 126 1.78e-23 95.9
MsG0480022947.01.T01 MTR_3g023310 48.148 108 42 2 184 291 10 103 2.17e-18 82.0
MsG0480022947.01.T01 MTR_8g039100 34.762 210 119 2 10 219 49 240 1.25e-32 129
MsG0480022947.01.T01 MTR_8g039100 35.294 187 115 2 108 289 55 240 4.36e-26 109
MsG0480022947.01.T01 MTR_8g039100 31.073 177 92 4 121 291 44 196 7.40e-14 73.2
MsG0480022947.01.T01 MTR_7g451440 38.144 194 102 1 11 204 189 364 1.39e-32 126
MsG0480022947.01.T01 MTR_7g451440 36.019 211 107 3 66 276 184 366 1.97e-29 117
MsG0480022947.01.T01 MTR_7g451440 37.705 183 99 3 112 289 184 356 1.77e-26 109
MsG0480022947.01.T01 MTR_7g451440 35.429 175 108 1 61 230 193 367 3.98e-26 108
MsG0480022947.01.T01 MTR_7g451440 39.683 126 75 1 166 291 188 312 4.28e-18 85.1
MsG0480022947.01.T01 MTR_8g007500 38.144 194 102 1 11 204 194 369 5.06e-31 122
MsG0480022947.01.T01 MTR_8g007500 36.111 180 110 1 56 230 193 372 1.40e-26 109
MsG0480022947.01.T01 MTR_8g007500 37.949 195 102 4 82 276 196 371 5.05e-24 102
MsG0480022947.01.T01 MTR_8g007500 37.725 167 98 3 128 289 196 361 1.72e-22 98.2
MsG0480022947.01.T01 MTR_8g007500 35.065 154 92 2 138 291 172 317 6.38e-16 79.0
MsG0480022947.01.T01 MTR_8g007500 34.247 146 90 2 151 291 196 340 7.03e-14 72.8
MsG0480022947.01.T01 MTR_1g062740 35.468 203 113 1 9 211 46 230 6.81e-30 120
MsG0480022947.01.T01 MTR_1g062740 35.714 182 111 2 82 258 50 230 6.15e-26 109
MsG0480022947.01.T01 MTR_1g062740 32.804 189 108 2 103 291 48 217 2.14e-21 95.9
MsG0480022947.01.T01 MTR_1g062740 38.053 113 66 2 11 120 140 251 2.75e-14 74.3
MsG0480022947.01.T01 MTR_4g099180 36.979 192 103 1 13 204 171 344 1.26e-29 117
MsG0480022947.01.T01 MTR_4g099180 36.275 204 111 2 73 276 162 346 5.28e-29 116
MsG0480022947.01.T01 MTR_4g099180 33.696 184 117 1 52 230 164 347 2.61e-25 105
MsG0480022947.01.T01 MTR_4g099180 38.068 176 103 2 119 289 162 336 2.58e-24 103
MsG0480022947.01.T01 MTR_4g099180 35.036 137 89 0 8 144 212 348 1.22e-18 86.7
MsG0480022947.01.T01 MTR_4g099180 40.476 126 74 1 166 291 168 292 2.99e-18 85.5
MsG0480022947.01.T01 MTR_3g072650 36.842 190 102 1 13 202 184 355 1.37e-29 117
MsG0480022947.01.T01 MTR_3g072650 36.139 202 109 3 78 278 180 362 2.70e-27 111
MsG0480022947.01.T01 MTR_3g072650 36.842 171 102 2 124 289 180 349 2.55e-25 105
MsG0480022947.01.T01 MTR_3g072650 32.039 206 121 2 47 252 172 358 2.26e-24 103
MsG0480022947.01.T01 MTR_3g072650 35.878 131 84 0 11 141 228 358 1.44e-18 86.7
MsG0480022947.01.T01 MTR_3g072650 36.719 128 80 1 164 291 179 305 2.92e-18 85.5
MsG0480022947.01.T01 MTR_5g459450 33.862 189 107 1 7 195 62 232 1.71e-29 119
MsG0480022947.01.T01 MTR_5g459450 31.694 183 106 2 106 288 69 232 2.83e-19 89.4
MsG0480022947.01.T01 MTR_5g459450 35.075 134 85 2 157 289 78 210 1.24e-12 69.3
MsG0480022947.01.T01 MTR_5g459450 30.719 153 103 2 141 291 38 189 5.76e-12 67.4
MsG0480022947.01.T01 MTR_3g072650 36.842 190 102 1 13 202 184 355 1.73e-29 117
MsG0480022947.01.T01 MTR_3g072650 36.139 202 109 3 78 278 180 362 1.59e-27 111
MsG0480022947.01.T01 MTR_3g072650 36.842 171 102 2 124 289 180 349 1.29e-25 106
MsG0480022947.01.T01 MTR_3g072650 32.039 206 121 2 47 252 172 358 2.03e-24 103
MsG0480022947.01.T01 MTR_3g072650 35.878 131 84 0 11 141 228 358 1.74e-18 85.9
MsG0480022947.01.T01 MTR_3g072650 36.719 128 80 1 164 291 179 305 2.55e-18 85.5
MsG0480022947.01.T01 MTR_1g050740 28.992 238 147 2 10 243 57 276 4.68e-28 115
MsG0480022947.01.T01 MTR_1g050740 34.043 188 118 2 106 288 61 247 2.58e-24 104
MsG0480022947.01.T01 MTR_1g050740 34.320 169 105 2 128 291 60 227 3.06e-20 92.4
MsG0480022947.01.T01 MTR_3g097260 36.816 201 109 1 4 204 45 227 5.29e-27 112
MsG0480022947.01.T01 MTR_3g097260 34.197 193 108 2 82 274 54 227 5.32e-18 85.5
MsG0480022947.01.T01 MTR_3g073100 32.653 196 113 2 10 204 53 230 8.30e-27 111
MsG0480022947.01.T01 MTR_3g073100 35.714 168 99 1 15 182 82 240 2.00e-22 99.0
MsG0480022947.01.T01 MTR_3g073100 31.364 220 139 6 91 303 44 258 1.03e-20 93.6
MsG0480022947.01.T01 MTR_8g095170 33.333 192 109 2 1 191 17 190 6.16e-26 108
MsG0480022947.01.T01 MTR_8g095170 33.333 195 109 4 61 254 31 205 1.44e-19 90.1
MsG0480022947.01.T01 MTR_8g095170 38.095 147 90 1 14 160 54 199 1.06e-18 87.4
MsG0480022947.01.T01 MTR_8g095170 33.871 186 103 3 106 290 30 196 3.94e-18 85.9
MsG0480022947.01.T01 MTR_8g095170 42.697 89 50 1 8 96 117 204 2.42e-11 65.1
MsG0480022947.01.T01 MTR_8g095170 33.333 192 109 2 1 191 17 190 1.04e-25 108
MsG0480022947.01.T01 MTR_8g095170 33.333 195 109 4 61 254 31 205 2.48e-19 89.4
MsG0480022947.01.T01 MTR_8g095170 38.095 147 90 1 14 160 54 199 1.91e-18 87.0
MsG0480022947.01.T01 MTR_8g095170 33.871 186 103 3 106 290 30 196 9.65e-18 84.7
MsG0480022947.01.T01 MTR_8g095170 42.697 89 50 1 8 96 117 204 3.24e-11 64.7
MsG0480022947.01.T01 MTR_7g089950 32.995 197 104 3 9 200 66 239 4.02e-25 107
MsG0480022947.01.T01 MTR_7g089950 34.911 169 104 2 128 291 70 237 1.06e-19 90.9
MsG0480022947.01.T01 MTR_7g089950 32.370 173 111 2 106 273 71 242 1.74e-19 90.1
MsG0480022947.01.T01 MTR_7g089950 37.008 127 80 0 12 138 115 241 9.31e-16 79.0
MsG0480022947.01.T01 MTR_3g014650 26.939 245 139 4 10 244 85 299 2.76e-23 101
MsG0480022947.01.T01 MTR_3g014650 35.366 164 98 3 128 291 88 243 5.04e-21 94.7
MsG0480022947.01.T01 MTR_3g014650 32.961 179 98 4 81 259 101 257 3.13e-19 89.4
MsG0480022947.01.T01 MTR_4g099180 39.831 118 71 0 11 128 169 286 1.97e-17 82.0
MsG0480022947.01.T01 MTR_4g099180 38.710 124 75 1 162 285 164 286 3.21e-15 75.9
MsG0480022947.01.T01 MTR_4g099180 38.583 127 72 2 118 239 161 286 1.73e-13 70.5
MsG0480022947.01.T01 MTR_4g099180 34.848 132 68 1 72 203 161 274 2.19e-13 70.5
MsG0480022947.01.T01 MTR_4g099180 40.206 97 58 0 52 148 164 260 2.25e-13 70.1
MsG0480022947.01.T01 MTR_4g099180 34.959 123 80 0 35 157 170 292 1.32e-12 68.2
MsG0480022947.01.T01 MTR_4g099180 39.831 118 71 0 11 128 169 286 2.54e-17 82.0
MsG0480022947.01.T01 MTR_4g099180 36.567 134 84 1 162 295 164 296 1.10e-15 77.0
MsG0480022947.01.T01 MTR_4g099180 40.206 97 58 0 52 148 164 260 2.70e-13 70.1
MsG0480022947.01.T01 MTR_4g099180 38.583 127 72 2 118 239 161 286 2.86e-13 70.1
MsG0480022947.01.T01 MTR_4g099180 34.848 132 68 1 72 203 161 274 2.86e-13 70.1
MsG0480022947.01.T01 MTR_4g099180 34.615 130 79 1 38 161 173 302 2.24e-12 67.4
MsG0480022947.01.T01 MTR_3g023315 61.111 54 12 1 2 55 5 49 2.17e-14 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480022947.01.T01 AT1G60890 41.784 213 106 1 4 216 13 207 1.02e-44 163
MsG0480022947.01.T01 AT1G60890 42.353 170 92 2 128 292 22 190 2.33e-32 128
MsG0480022947.01.T01 AT1G60890 36.224 196 120 1 61 251 24 219 1.22e-29 120
MsG0480022947.01.T01 AT1G60890 35.294 187 115 2 105 286 22 207 6.41e-26 109
MsG0480022947.01.T01 AT1G60890 42.512 207 101 1 10 216 7 195 1.20e-44 163
MsG0480022947.01.T01 AT1G60890 42.353 170 92 2 128 292 10 178 2.70e-32 127
MsG0480022947.01.T01 AT1G60890 35.859 198 122 1 59 251 10 207 1.42e-29 120
MsG0480022947.01.T01 AT1G60890 35.294 187 115 2 105 286 10 195 7.18e-26 108
MsG0480022947.01.T01 AT1G60890 43.434 99 55 1 11 109 100 197 8.70e-18 85.1
MsG0480022947.01.T01 AT1G10900 37.238 239 128 3 10 244 7 227 5.57e-40 150
MsG0480022947.01.T01 AT1G10900 39.412 170 97 2 128 292 10 178 3.72e-28 115
MsG0480022947.01.T01 AT1G10900 33.810 210 110 4 82 286 10 195 3.70e-23 100
MsG0480022947.01.T01 AT1G10900 37.238 239 128 3 10 244 7 227 5.57e-40 150
MsG0480022947.01.T01 AT1G10900 39.412 170 97 2 128 292 10 178 3.72e-28 115
MsG0480022947.01.T01 AT1G10900 33.810 210 110 4 82 286 10 195 3.70e-23 100
MsG0480022947.01.T01 AT1G10900 37.238 239 128 3 10 244 7 227 5.57e-40 150
MsG0480022947.01.T01 AT1G10900 39.412 170 97 2 128 292 10 178 3.72e-28 115
MsG0480022947.01.T01 AT1G10900 33.810 210 110 4 82 286 10 195 3.70e-23 100
MsG0480022947.01.T01 AT1G21980 34.934 229 125 3 10 235 72 279 8.62e-37 140
MsG0480022947.01.T01 AT1G21980 35.196 179 108 3 106 277 76 253 2.23e-22 98.6
MsG0480022947.01.T01 AT1G77740 36.788 193 104 1 10 202 73 247 2.88e-34 133
MsG0480022947.01.T01 AT1G77740 33.862 189 106 2 61 249 78 247 1.60e-26 110
MsG0480022947.01.T01 AT1G77740 34.807 181 109 3 106 278 77 256 5.03e-23 100
MsG0480022947.01.T01 AT1G77740 36.788 193 104 1 10 202 73 247 2.88e-34 133
MsG0480022947.01.T01 AT1G77740 33.862 189 106 2 61 249 78 247 1.60e-26 110
MsG0480022947.01.T01 AT1G77740 34.807 181 109 3 106 278 77 256 5.03e-23 100
MsG0480022947.01.T01 AT3G07960 35.468 203 113 1 10 212 23 207 9.25e-34 131
MsG0480022947.01.T01 AT3G07960 34.973 183 113 2 106 283 27 208 9.08e-28 114
MsG0480022947.01.T01 AT3G07960 38.384 99 60 1 193 291 27 124 8.22e-13 69.7
MsG0480022947.01.T01 AT3G07960 35.468 203 113 1 10 212 23 207 9.25e-34 131
MsG0480022947.01.T01 AT3G07960 34.973 183 113 2 106 283 27 208 9.08e-28 114
MsG0480022947.01.T01 AT3G07960 38.384 99 60 1 193 291 27 124 8.22e-13 69.7
MsG0480022947.01.T01 AT3G07960 35.468 203 113 1 10 212 23 207 1.19e-33 131
MsG0480022947.01.T01 AT3G07960 34.973 183 113 2 106 283 27 208 1.18e-27 114
MsG0480022947.01.T01 AT3G07960 38.384 99 60 1 193 291 27 124 9.03e-13 69.7
MsG0480022947.01.T01 AT3G07960 35.468 203 113 1 10 212 23 207 1.66e-33 131
MsG0480022947.01.T01 AT3G07960 34.973 183 113 2 106 283 27 208 1.59e-27 114
MsG0480022947.01.T01 AT3G07960 38.384 99 60 1 193 291 27 124 1.04e-12 69.7
MsG0480022947.01.T01 AT3G09920 36.449 214 118 1 9 222 48 243 9.32e-32 126
MsG0480022947.01.T01 AT3G09920 35.616 219 120 3 61 277 54 253 2.28e-28 116
MsG0480022947.01.T01 AT3G09920 38.095 189 98 2 103 291 50 219 5.79e-26 109
MsG0480022947.01.T01 AT3G09920 36.449 214 118 1 9 222 48 243 9.32e-32 126
MsG0480022947.01.T01 AT3G09920 35.616 219 120 3 61 277 54 253 2.28e-28 116
MsG0480022947.01.T01 AT3G09920 38.095 189 98 2 103 291 50 219 5.79e-26 109
MsG0480022947.01.T01 AT3G09920 36.449 214 118 1 9 222 48 243 9.32e-32 126
MsG0480022947.01.T01 AT3G09920 35.616 219 120 3 61 277 54 253 2.28e-28 116
MsG0480022947.01.T01 AT3G09920 38.095 189 98 2 103 291 50 219 5.79e-26 109
MsG0480022947.01.T01 AT3G09920 36.449 214 118 1 9 222 48 243 9.32e-32 126
MsG0480022947.01.T01 AT3G09920 35.616 219 120 3 61 277 54 253 2.28e-28 116
MsG0480022947.01.T01 AT3G09920 38.095 189 98 2 103 291 50 219 5.79e-26 109
MsG0480022947.01.T01 AT3G56960 29.630 270 163 3 10 271 68 318 1.02e-30 123
MsG0480022947.01.T01 AT3G56960 32.804 189 120 3 106 289 72 258 5.39e-22 97.8
MsG0480022947.01.T01 AT3G56960 33.728 169 106 2 128 291 71 238 2.11e-20 92.8
MsG0480022947.01.T01 AT3G56960 29.630 270 163 3 10 271 68 318 1.02e-30 123
MsG0480022947.01.T01 AT3G56960 32.804 189 120 3 106 289 72 258 5.39e-22 97.8
MsG0480022947.01.T01 AT3G56960 33.728 169 106 2 128 291 71 238 2.11e-20 92.8
MsG0480022947.01.T01 AT1G21920 36.842 190 102 1 13 202 173 344 4.81e-30 118
MsG0480022947.01.T01 AT1G21920 33.981 206 117 2 47 252 161 347 3.04e-25 105
MsG0480022947.01.T01 AT1G21920 33.668 199 113 2 78 276 169 348 1.49e-24 103
MsG0480022947.01.T01 AT1G21920 36.257 171 103 2 124 289 169 338 2.96e-24 102
MsG0480022947.01.T01 AT1G21920 38.281 128 78 1 164 291 168 294 5.79e-18 84.3
MsG0480022947.01.T01 AT2G41210 29.151 271 163 3 10 271 66 316 8.71e-30 120
MsG0480022947.01.T01 AT2G41210 31.776 214 126 3 71 283 57 251 2.50e-22 98.6
MsG0480022947.01.T01 AT2G41210 34.254 181 112 3 117 291 57 236 1.03e-20 94.0
MsG0480022947.01.T01 AT1G21920 36.842 190 102 1 13 202 173 344 9.04e-30 118
MsG0480022947.01.T01 AT1G21920 33.981 206 117 2 47 252 161 347 7.37e-25 104
MsG0480022947.01.T01 AT1G21920 33.668 199 113 2 78 276 169 348 4.83e-24 102
MsG0480022947.01.T01 AT1G21920 36.257 171 103 2 124 289 169 338 9.75e-24 101
MsG0480022947.01.T01 AT1G21920 38.281 128 78 1 164 291 168 294 1.11e-17 84.0
MsG0480022947.01.T01 AT4G17080 36.082 194 106 1 11 204 254 429 4.52e-29 117
MsG0480022947.01.T01 AT4G17080 37.059 170 101 2 125 289 253 421 7.65e-25 105
MsG0480022947.01.T01 AT4G17080 35.450 189 116 2 93 276 244 431 6.15e-24 102
MsG0480022947.01.T01 AT4G17080 32.609 184 119 1 52 230 249 432 9.08e-24 102
MsG0480022947.01.T01 AT4G17080 38.889 126 76 1 166 291 253 377 3.94e-19 88.6
MsG0480022947.01.T01 AT2G35170 35.567 194 107 1 11 204 223 398 5.27e-28 114
MsG0480022947.01.T01 AT2G35170 33.838 198 112 2 79 276 222 400 1.55e-24 104
MsG0480022947.01.T01 AT2G35170 32.609 184 119 1 52 230 218 401 1.08e-22 99.0
MsG0480022947.01.T01 AT2G35170 35.294 170 104 2 125 289 222 390 4.54e-22 97.1
MsG0480022947.01.T01 AT2G35170 39.695 131 79 0 11 141 269 399 6.33e-22 96.7
MsG0480022947.01.T01 AT2G35170 35.714 126 80 1 166 291 222 346 9.95e-15 75.5
MsG0480022947.01.T01 AT1G77660 36.842 190 102 1 13 202 177 348 5.66e-28 113
MsG0480022947.01.T01 AT1G77660 35.859 198 108 3 78 275 173 351 5.12e-25 105
MsG0480022947.01.T01 AT1G77660 34.158 202 114 2 51 252 169 351 4.63e-24 102
MsG0480022947.01.T01 AT1G77660 36.628 172 103 2 124 290 173 343 1.03e-23 101
MsG0480022947.01.T01 AT1G77660 39.844 128 76 1 164 291 172 298 7.24e-17 81.6
MsG0480022947.01.T01 AT2G26420 39.394 165 95 1 10 169 49 213 3.12e-27 113
MsG0480022947.01.T01 AT2G26420 38.125 160 94 1 61 215 54 213 1.72e-23 102
MsG0480022947.01.T01 AT2G26420 40.252 159 89 2 108 261 55 212 6.24e-23 100
MsG0480022947.01.T01 AT2G26420 34.028 144 89 2 153 291 54 196 9.80e-13 69.7
MsG0480022947.01.T01 AT2G26420 39.394 165 95 1 10 169 49 213 4.36e-27 112
MsG0480022947.01.T01 AT2G26420 38.125 160 94 1 61 215 54 213 2.37e-23 101
MsG0480022947.01.T01 AT2G26420 40.252 159 89 2 108 261 55 212 8.19e-23 100
MsG0480022947.01.T01 AT2G26420 34.028 144 89 2 153 291 54 196 1.34e-12 69.3
MsG0480022947.01.T01 AT2G26420 39.394 165 95 1 10 169 49 213 4.36e-27 112
MsG0480022947.01.T01 AT2G26420 38.125 160 94 1 61 215 54 213 2.37e-23 101
MsG0480022947.01.T01 AT2G26420 40.252 159 89 2 108 261 55 212 8.19e-23 100
MsG0480022947.01.T01 AT2G26420 34.028 144 89 2 153 291 54 196 1.34e-12 69.3

Find 83 sgRNAs with CRISPR-Local

Find 199 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATAGAGGAAATTGGGAAAA+AGG 0.173727 4:-78954028 MsG0480022947.01.T01:CDS
TTTGATGGTTGTTGGTTAAA+TGG 0.259717 4:-78953682 MsG0480022947.01.T01:CDS
GGGATGTTTATAGAGGAAAT+TGG 0.268173 4:-78954036 MsG0480022947.01.T01:CDS
GGAAAGTACACATGGTTAAA+TGG 0.268364 4:-78954196 MsG0480022947.01.T01:CDS
GAGATGTCTTTACTGGAAAA+TGG 0.277767 4:-78953621 MsG0480022947.01.T01:CDS
GGGATTATGAAGTGGGTTAA+TGG 0.303945 4:-78954127 MsG0480022947.01.T01:CDS
AAGGAAAAGGGATTATGAAT+TGG 0.317461 4:-78953997 MsG0480022947.01.T01:CDS
GCAAACGGGGACTTGTACTT+TGG 0.328345 4:-78953349 MsG0480022947.01.T01:intron
ATGGAAAAGGGGTTATGAAT+TGG 0.346611 4:-78953720 MsG0480022947.01.T01:CDS
TATGAGGGCGATTGGGTTGA+TGG 0.367519 4:-78954166 MsG0480022947.01.T01:CDS
GAGTTTATAGATTTGCAAAT+GGG 0.384860 4:-78953919 MsG0480022947.01.T01:CDS
GAGTTTATAGATTTGCAAAT+GGG 0.384860 4:-78954057 MsG0480022947.01.T01:CDS
TTTGTTGGTTGTTGGTCAAA+TGG 0.389525 4:-78953403 MsG0480022947.01.T01:CDS
AGGAAAAGGGATTATGAATT+GGG 0.394451 4:-78953996 MsG0480022947.01.T01:CDS
AATGGACTTAAAGATGGATA+TGG 0.397862 4:-78954079 MsG0480022947.01.T01:CDS
ATGGGAATGGGATTATGAAT+TGG 0.398257 4:-78953582 MsG0480022947.01.T01:CDS
TGGAAAAGGGGTTATGAATT+GGG 0.400152 4:-78953719 MsG0480022947.01.T01:CDS
GTGATGTATTTGTTGGTTGT+TGG 0.400157 4:-78953411 MsG0480022947.01.T01:CDS
GCAAACGGAGATGTCTTTAC+TGG 0.407775 4:-78953628 MsG0480022947.01.T01:CDS
AAGGGAACATGGATGGAAAA+GGG 0.408341 4:-78953732 MsG0480022947.01.T01:CDS
GGATGTTTATAGAGGAAATT+GGG 0.419869 4:-78954035 MsG0480022947.01.T01:CDS
GCAAATGGGGATGTTTATAG+AGG 0.423330 4:-78954043 MsG0480022947.01.T01:CDS
GTTAAATGGAACAATATATG+AGG 0.425566 4:-78954182 MsG0480022947.01.T01:CDS
TTCGATGGTTGTTGGTCAAA+TGG 0.428572 4:-78953959 MsG0480022947.01.T01:CDS
TTCGATGGTTGTTGGTCAAA+TGG 0.428572 4:-78954097 MsG0480022947.01.T01:CDS
GGAGTTTATAGATTTGCAAA+TGG 0.437498 4:-78953920 MsG0480022947.01.T01:CDS
GGAGTTTATAGATTTGCAAA+TGG 0.437498 4:-78954058 MsG0480022947.01.T01:CDS
TTTGTTGGTCGTTGGTCAAA+TGG 0.439027 4:-78953544 MsG0480022947.01.T01:CDS
AAAGGGAACATGGATGGAAA+AGG 0.445128 4:-78953733 MsG0480022947.01.T01:intron
GAGTTTATAGATTTGCAAAC+GGG 0.446697 4:-78953363 MsG0480022947.01.T01:CDS
GCTAATGGTGATGTATTTGT+TGG 0.448014 4:-78953418 MsG0480022947.01.T01:CDS
AAAGGGAAAAGGGATGGAAA+AGG 0.451894 4:-78953454 MsG0480022947.01.T01:CDS
AAAGGGAAAAGGGATGGAAA+AGG 0.451894 4:-78953872 MsG0480022947.01.T01:CDS
TGGGAATGGGATTATGAATT+GGG 0.452671 4:-78953581 MsG0480022947.01.T01:CDS
AATGGACTTAGAGATGGATA+TGG 0.455400 4:-78953941 MsG0480022947.01.T01:CDS
AAAGGGAAAATAGAAGGAAA+AGG 0.457356 4:-78954010 MsG0480022947.01.T01:CDS
AAGGGAAAAGGGATGGAAAA+GGG 0.459912 4:-78953453 MsG0480022947.01.T01:CDS
AAGGGAAAAGGGATGGAAAA+GGG 0.459912 4:-78953871 MsG0480022947.01.T01:CDS
ATGATGATGGGAGGGCCATT+TGG 0.466206 4:-78951763 MsG0480022947.01.T01:CDS
GGGATTATGAATTGGGCTAA+TGG 0.469235 4:-78953574 MsG0480022947.01.T01:CDS
AACAATATATGAGGGCGATT+GGG 0.469878 4:-78954173 MsG0480022947.01.T01:CDS
GGACTTATACATGGATCTGC+TGG 0.470967 4:-78953523 MsG0480022947.01.T01:CDS
GAACAATATATGAGGGCGAT+TGG 0.474947 4:-78954174 MsG0480022947.01.T01:CDS
TGGTCAAATGGACTTAAAGA+TGG 0.475449 4:-78954085 MsG0480022947.01.T01:CDS
GAGTTTATAGATTTGCGAAT+GGG 0.478780 4:-78953501 MsG0480022947.01.T01:CDS
AAGGGAAAATAGAAGGAAAA+GGG 0.480073 4:-78954009 MsG0480022947.01.T01:CDS
TTCATATCTTCTATACCAAA+TGG 0.483510 4:+78951748 None:intergenic
TGTCTACATTGATAGCTTCA+AGG 0.487846 4:-78954239 MsG0480022947.01.T01:CDS
GGAATGTCTACATTGGAGAT+TGG 0.492915 4:-78953480 MsG0480022947.01.T01:CDS
AATGGAGTTAGACATGGATC+TGG 0.493980 4:-78953664 MsG0480022947.01.T01:CDS
GGAGTTTATAGATTTGCAAA+CGG 0.497490 4:-78953364 MsG0480022947.01.T01:CDS
AATGGACTTAGACATGGATC+TGG 0.498528 4:-78953385 MsG0480022947.01.T01:CDS
TGGGTTGATGGACAAATGAC+AGG 0.510413 4:-78954154 MsG0480022947.01.T01:CDS
GGAATTTATACAAATGCAAA+CGG 0.519010 4:-78953643 MsG0480022947.01.T01:CDS
AGGGAAAGGGATTATGAAGT+GGG 0.525790 4:-78954134 MsG0480022947.01.T01:CDS
GATGGACAAATGACAGGGAA+AGG 0.533375 4:-78954148 MsG0480022947.01.T01:CDS
TTCATACTGAACACTACTCA+TGG 0.535194 4:-78951821 MsG0480022947.01.T01:CDS
TGGAAAAGGGATTATGAGAT+GGG 0.539183 4:-78953858 MsG0480022947.01.T01:CDS
AGGGAACATGGATGGAAAAG+GGG 0.546468 4:-78953731 MsG0480022947.01.T01:CDS
GGGATGTCCACACTGGACAT+TGG 0.547142 4:-78953898 MsG0480022947.01.T01:CDS
TGGTCAAATGGACTTAGAGA+TGG 0.548468 4:-78953947 MsG0480022947.01.T01:CDS
AGATATGAAGATGTACAGTC+AGG 0.549959 4:-78951734 MsG0480022947.01.T01:CDS
TGGTCAAATGGACTTATACA+TGG 0.553415 4:-78953532 MsG0480022947.01.T01:CDS
ATGGAAAAGGGATTATGAGA+TGG 0.554891 4:-78953859 MsG0480022947.01.T01:CDS
TGGTTAAATGGAGTTAGACA+TGG 0.560700 4:-78953670 MsG0480022947.01.T01:CDS
GTCTACATTGATAGCTTCAA+GGG 0.566446 4:-78954238 MsG0480022947.01.T01:CDS
AGTTTATAGATTTGCAAATG+GGG 0.568661 4:-78953918 MsG0480022947.01.T01:CDS
AGTTTATAGATTTGCAAATG+GGG 0.568661 4:-78954056 MsG0480022947.01.T01:CDS
GGAGTTTATAGATTTGCGAA+TGG 0.572531 4:-78953502 MsG0480022947.01.T01:CDS
ATGGACAAATGACAGGGAAA+GGG 0.575361 4:-78954147 MsG0480022947.01.T01:CDS
AGAGATCATGACGATGAGAA+AGG 0.575427 4:-78951858 MsG0480022947.01.T01:CDS
GGGATTATGAATTGGGCAAG+TGG 0.575907 4:-78953989 MsG0480022947.01.T01:CDS
CAGGGAAAGGGATTATGAAG+TGG 0.578836 4:-78954135 MsG0480022947.01.T01:CDS
GCAAATGGGGATGTCCACAC+TGG 0.580776 4:-78953905 MsG0480022947.01.T01:CDS
TTCAAGGGTGAACTTTGTCA+TGG 0.588563 4:-78954223 MsG0480022947.01.T01:CDS
GCGAATGGGAATGTCTACAT+TGG 0.591535 4:-78953487 MsG0480022947.01.T01:CDS
TGGTCAAATGGACTTAGACA+TGG 0.597161 4:-78953391 MsG0480022947.01.T01:CDS
GGTGAACTTTGTCATGGCAA+CGG 0.617225 4:-78954217 MsG0480022947.01.T01:CDS
GGGGTTATGAATTGGGCTAA+CGG 0.619629 4:-78953712 MsG0480022947.01.T01:CDS
TTAAATGGAACAATATATGA+GGG 0.622343 4:-78954181 MsG0480022947.01.T01:CDS
AGTTTATAGATTTGCAAACG+GGG 0.668514 4:-78953362 MsG0480022947.01.T01:CDS
GGGTTGATGGACAAATGACA+GGG 0.704147 4:-78954153 MsG0480022947.01.T01:CDS
ATGGCAACGGAAAGTACACA+TGG 0.710314 4:-78954204 MsG0480022947.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATACTTAATTTTTTTAATCA+TGG - Chr4:78952960-78952979 MsG0480022947.01.T01:intron 10.0%
!! AAAAAGTGATATAATATTCA+TGG - Chr4:78952908-78952927 MsG0480022947.01.T01:intron 15.0%
!! AAAATGGAAAAATATGAAAA+AGG - Chr4:78952411-78952430 MsG0480022947.01.T01:intron 15.0%
!! TCATTTATGTAATATGATTA+TGG - Chr4:78953359-78953378 MsG0480022947.01.T01:CDS 15.0%
!!! AAGTTAACAAATTTTACTTT+TGG + Chr4:78954018-78954037 None:intergenic 15.0%
!!! AATATCACAAACATATTTTT+TGG + Chr4:78953871-78953890 None:intergenic 15.0%
!!! AATTTGACTAATAGATTTTA+TGG - Chr4:78952998-78953017 MsG0480022947.01.T01:intron 15.0%
!!! TTCTTATATTAATTTGAGTT+GGG + Chr4:78953117-78953136 None:intergenic 15.0%
!!! TTTCTTATATTAATTTGAGT+TGG + Chr4:78953118-78953137 None:intergenic 15.0%
!! ACATTTAACAAAAAAACGAT+TGG - Chr4:78954042-78954061 MsG0480022947.01.T01:CDS 20.0%
!! GTTTGTGATATTAGTTAATT+AGG - Chr4:78953879-78953898 MsG0480022947.01.T01:CDS 20.0%
!! TAAACGTTGATATATTTAGT+GGG + Chr4:78953520-78953539 None:intergenic 20.0%
!! TATGAATATAGGAAATTTAG+AGG + Chr4:78953552-78953571 None:intergenic 20.0%
!! TCAAGTTATAAATGGAAAAT+TGG - Chr4:78953163-78953182 MsG0480022947.01.T01:intron 20.0%
!! TCATATTACATAAATGAAGT+TGG + Chr4:78953356-78953375 None:intergenic 20.0%
!! TTAAACGTTGATATATTTAG+TGG + Chr4:78953521-78953540 None:intergenic 20.0%
!! TTAAATGGAACAATATATGA+GGG - Chr4:78951835-78951854 MsG0480022947.01.T01:CDS 20.0%
! AACTGTTTGTAATGTAGAAT+TGG + Chr4:78953990-78954009 None:intergenic 25.0%
! ACTGTTTGTAATGTAGAATT+GGG + Chr4:78953989-78954008 None:intergenic 25.0%
! AGTTTATAGATTTGCAAATG+GGG - Chr4:78951960-78951979 MsG0480022947.01.T01:intron 25.0%
! GAGTTTATAGATTTGCAAAT+GGG - Chr4:78951959-78951978 MsG0480022947.01.T01:intron 25.0%
! GGAAAAATATGAAAAAGGAT+GGG - Chr4:78952416-78952435 MsG0480022947.01.T01:intron 25.0%
! GGAATTTATACAAATGCAAA+CGG - Chr4:78952373-78952392 MsG0480022947.01.T01:intron 25.0%
! GTTAAATGGAACAATATATG+AGG - Chr4:78951834-78951853 MsG0480022947.01.T01:CDS 25.0%
! TGCATATTGATATGTTTGAT+AGG - Chr4:78953933-78953952 MsG0480022947.01.T01:CDS 25.0%
! TGGAAAAATATGAAAAAGGA+TGG - Chr4:78952415-78952434 MsG0480022947.01.T01:intron 25.0%
! TTCATATCTTCTATACCAAA+TGG + Chr4:78954271-78954290 None:intergenic 25.0%
!! AGTCAAATTATTTTCTACAC+AGG + Chr4:78952987-78953006 None:intergenic 25.0%
!! GTCAAATTATTTTCTACACA+GGG + Chr4:78952986-78953005 None:intergenic 25.0%
!! TTTGTTGTGATAGTAACAAA+CGG + Chr4:78953424-78953443 None:intergenic 25.0%
!!! AAAGAGAAGTCATTTTCAAA+CGG - Chr4:78951751-78951770 MsG0480022947.01.T01:CDS 25.0%
!!! TACGTGTTTCAAGTTATAAA+TGG - Chr4:78953155-78953174 MsG0480022947.01.T01:intron 25.0%
!!! TGCAAACGAATTTTTTTTGA+CGG - Chr4:78953634-78953653 MsG0480022947.01.T01:CDS 25.0%
AAAGGGAAAATAGAAGGAAA+AGG - Chr4:78952006-78952025 MsG0480022947.01.T01:intron 30.0%
AAGGAAAAGGGATTATGAAT+TGG - Chr4:78952019-78952038 MsG0480022947.01.T01:intron 30.0%
AAGGGAAAATAGAAGGAAAA+GGG - Chr4:78952007-78952026 MsG0480022947.01.T01:intron 30.0%
AATATGAAAAAGGATGGGAA+TGG - Chr4:78952421-78952440 MsG0480022947.01.T01:intron 30.0%
AATTGGAAAAAAAGGGAACA+TGG - Chr4:78952273-78952292 MsG0480022947.01.T01:intron 30.0%
ACATTGGAAAAAAGGGAAAA+GGG - Chr4:78952134-78952153 MsG0480022947.01.T01:intron 30.0%
ACATTGGAGATTGGAAAAAA+GGG - Chr4:78952545-78952564 MsG0480022947.01.T01:intron 30.0%
AGATTGGAAAAAAGGGAAAA+GGG - Chr4:78952552-78952571 MsG0480022947.01.T01:intron 30.0%
AGGAAAAGGGATTATGAATT+GGG - Chr4:78952020-78952039 MsG0480022947.01.T01:intron 30.0%
AGGATAGTAAAGTTGTTATC+AGG - Chr4:78953842-78953861 MsG0480022947.01.T01:CDS 30.0%
AGTTTATAGATTTGCAAACG+GGG - Chr4:78952654-78952673 MsG0480022947.01.T01:intron 30.0%
ATAGAGGAAATTGGGAAAAA+GGG - Chr4:78951989-78952008 MsG0480022947.01.T01:intron 30.0%
ATATGAAAAAGGATGGGAAT+GGG - Chr4:78952422-78952441 MsG0480022947.01.T01:intron 30.0%
GAGCTTAATCTATACAAGAT+GGG - Chr4:78953277-78953296 MsG0480022947.01.T01:intron 30.0%
GAGTTTATAGATTTGCAAAC+GGG - Chr4:78952653-78952672 MsG0480022947.01.T01:intron 30.0%
GAGTTTATAGATTTGCGAAT+GGG - Chr4:78952515-78952534 MsG0480022947.01.T01:intron 30.0%
GATATAATATTCATGGTCAG+TGG - Chr4:78952915-78952934 MsG0480022947.01.T01:intron 30.0%
GGAGTTTATAGATTTGCAAA+CGG - Chr4:78951958-78951977 MsG0480022947.01.T01:intron 30.0%
GGAGTTTATAGATTTGCAAA+TGG - Chr4:78951958-78951977 MsG0480022947.01.T01:intron 30.0%
GGATGTTTATAGAGGAAATT+GGG - Chr4:78951981-78952000 MsG0480022947.01.T01:intron 30.0%
GGCTTCAAGTGTTTATAAAA+TGG - Chr4:78953019-78953038 MsG0480022947.01.T01:intron 30.0%
GTTTATAAAATGGTTGCAGA+CGG - Chr4:78953029-78953048 MsG0480022947.01.T01:intron 30.0%
TAAAACTTGCCCAAAATTGA+TGG - Chr4:78953958-78953977 MsG0480022947.01.T01:CDS 30.0%
TACATTGGAGATTGGAAAAA+AGG - Chr4:78952544-78952563 MsG0480022947.01.T01:intron 30.0%
TACCTTAATCCATACAGAAA+TGG + Chr4:78953203-78953222 None:intergenic 30.0%
TATAGAGGAAATTGGGAAAA+AGG - Chr4:78951988-78952007 MsG0480022947.01.T01:intron 30.0%
TCAAATGGAACAATATACGA+GGG - Chr4:78952736-78952755 MsG0480022947.01.T01:intron 30.0%
TGAGCTTAATCTATACAAGA+TGG - Chr4:78953276-78953295 MsG0480022947.01.T01:intron 30.0%
TTTATAAAATGGTTGCAGAC+GGG - Chr4:78953030-78953049 MsG0480022947.01.T01:intron 30.0%
! AAAAAACGATTGGCATTTTG+TGG - Chr4:78954052-78954071 MsG0480022947.01.T01:CDS 30.0%
! AAAAACGATTGGCATTTTGT+GGG - Chr4:78954053-78954072 MsG0480022947.01.T01:CDS 30.0%
! AATAACCTTTTCCATGGAAA+GGG - Chr4:78952700-78952719 MsG0480022947.01.T01:intron 30.0%
! AATGGACTTAAAGATGGATA+TGG - Chr4:78951937-78951956 MsG0480022947.01.T01:intron 30.0%
! AATGGATTTAGACATGGATA+TGG - Chr4:78952213-78952232 MsG0480022947.01.T01:intron 30.0%
! AGTAATAAACTCTAGCTTCA+TGG + Chr4:78953066-78953085 None:intergenic 30.0%
! ATGATGATGATGATGATGAT+GGG - Chr4:78954220-78954239 MsG0480022947.01.T01:CDS 30.0%
! ATGGAAAAGGGATTTTGAAT+AGG - Chr4:78952575-78952594 MsG0480022947.01.T01:intron 30.0%
! GTTAAAAGTACAAAGATGAG+TGG + Chr4:78953328-78953347 None:intergenic 30.0%
! TGGAAAAGGGATTTTGAATA+GGG - Chr4:78952576-78952595 MsG0480022947.01.T01:intron 30.0%
! TTAGGCTGCTGAAATTTTTA+TGG - Chr4:78953897-78953916 MsG0480022947.01.T01:CDS 30.0%
! TTCAAGAATAACCTTTTCCA+TGG - Chr4:78952694-78952713 MsG0480022947.01.T01:intron 30.0%
! TTTGATGGTTGTTGGTTAAA+TGG - Chr4:78952334-78952353 MsG0480022947.01.T01:intron 30.0%
!! AAGAGAAGTCATTTTCAAAC+GGG - Chr4:78951752-78951771 MsG0480022947.01.T01:CDS 30.0%
!! GAGTTTGTAGATTTGCTAAT+GGG - Chr4:78952235-78952254 MsG0480022947.01.T01:intron 30.0%
!!! TTCCCTTTTTTTCCAATTTC+CGG + Chr4:78952271-78952290 None:intergenic 30.0%
AACAATATATGAGGGCGATT+GGG - Chr4:78951843-78951862 MsG0480022947.01.T01:CDS 35.0%
AATTCCACAAGAAAATCCGA+AGG - Chr4:78953227-78953246 MsG0480022947.01.T01:intron 35.0%
ACACCGGAAATTGGAAAAAA+AGG - Chr4:78952265-78952284 MsG0480022947.01.T01:intron 35.0%
ACACTGGACATTGGAAAAAA+GGG - Chr4:78952127-78952146 MsG0480022947.01.T01:intron 35.0%
AGATATGAAGATGTACAGTC+AGG - Chr4:78954282-78954301 MsG0480022947.01.T01:CDS 35.0%
ATGGAAAAGGGATTATGAGA+TGG - Chr4:78952157-78952176 MsG0480022947.01.T01:intron 35.0%
ATGGAAAAGGGGTTATGAAT+TGG - Chr4:78952296-78952315 MsG0480022947.01.T01:intron 35.0%
ATGGGAATGGGATTATGAAT+TGG - Chr4:78952434-78952453 MsG0480022947.01.T01:intron 35.0%
ATTCCACAAGAAAATCCGAA+GGG - Chr4:78953228-78953247 MsG0480022947.01.T01:intron 35.0%
CACCGGAAATTGGAAAAAAA+GGG - Chr4:78952266-78952285 MsG0480022947.01.T01:intron 35.0%
CCTTCAAAAATCTCCATAGA+AGG + Chr4:78952810-78952829 None:intergenic 35.0%
CTGTGATAAGTGCATGTTAT+TGG - Chr4:78953775-78953794 MsG0480022947.01.T01:intron 35.0%
CTTAATCTATACAAGATGGG+AGG - Chr4:78953280-78953299 MsG0480022947.01.T01:intron 35.0%
GACATTGGAAAAAAGGGAAA+AGG - Chr4:78952133-78952152 MsG0480022947.01.T01:intron 35.0%
GAGATGTCTTTACTGGAAAA+TGG - Chr4:78952395-78952414 MsG0480022947.01.T01:intron 35.0%
GAGATTGGAAAAAAGGGAAA+AGG - Chr4:78952551-78952570 MsG0480022947.01.T01:intron 35.0%
GCATAGGAAAAACAAAACAC+TGG + Chr4:78954138-78954157 None:intergenic 35.0%
GGAGTTTATAGATTTGCGAA+TGG - Chr4:78952514-78952533 MsG0480022947.01.T01:intron 35.0%
GGGATGTTTATAGAGGAAAT+TGG - Chr4:78951980-78951999 MsG0480022947.01.T01:intron 35.0%
GTCAAATGGAACAATATACG+AGG - Chr4:78952735-78952754 MsG0480022947.01.T01:intron 35.0%
GTGGAAAAATTGAAACCCTT+CGG + Chr4:78953246-78953265 None:intergenic 35.0%
TGGAAAAGGGATTATGAGAT+GGG - Chr4:78952158-78952177 MsG0480022947.01.T01:intron 35.0%
TGGAAAAGGGGTTATGAATT+GGG - Chr4:78952297-78952316 MsG0480022947.01.T01:intron 35.0%
TGGGAAAAAGGGAAAATAGA+AGG - Chr4:78952000-78952019 MsG0480022947.01.T01:intron 35.0%
TGGGAATGGGATTATGAATT+GGG - Chr4:78952435-78952454 MsG0480022947.01.T01:intron 35.0%
TGGTTAAATGGAGTTAGACA+TGG - Chr4:78952346-78952365 MsG0480022947.01.T01:intron 35.0%
TTAAGCTCATCAATGATGAG+TGG + Chr4:78953265-78953284 None:intergenic 35.0%
TTCATACTGAACACTACTCA+TGG - Chr4:78954195-78954214 MsG0480022947.01.T01:CDS 35.0%
TTTGTGGGATGTATCTCATA+TGG - Chr4:78954068-78954087 MsG0480022947.01.T01:CDS 35.0%
! AATGGACTTAGAGATGGATA+TGG - Chr4:78952075-78952094 MsG0480022947.01.T01:intron 35.0%
! CCTTCTATGGAGATTTTTGA+AGG - Chr4:78952807-78952826 MsG0480022947.01.T01:intron 35.0%
! GAATAACCTTTTCCATGGAA+AGG - Chr4:78952699-78952718 MsG0480022947.01.T01:intron 35.0%
! GACCATTTCTGTATGGATTA+AGG - Chr4:78953198-78953217 MsG0480022947.01.T01:intron 35.0%
! GATGATGATGATGATGATGA+TGG - Chr4:78954222-78954241 MsG0480022947.01.T01:CDS 35.0%
! GCTAATGGTGATGTATTTGT+TGG - Chr4:78952598-78952617 MsG0480022947.01.T01:intron 35.0%
! GCTAATGTTGATGTTTTCGA+TGG - Chr4:78952180-78952199 MsG0480022947.01.T01:intron 35.0%
! GGAAAGTACACATGGTTAAA+TGG - Chr4:78951820-78951839 MsG0480022947.01.T01:CDS 35.0%
! GTCTACATTGATAGCTTCAA+GGG - Chr4:78951778-78951797 MsG0480022947.01.T01:CDS 35.0%
! GTGATGTATTTGTTGGTTGT+TGG - Chr4:78952605-78952624 MsG0480022947.01.T01:intron 35.0%
! TGGGTCTTACCATCAATTTT+GGG + Chr4:78953970-78953989 None:intergenic 35.0%
! TGGTCAAATGGACTTAAAGA+TGG - Chr4:78951931-78951950 MsG0480022947.01.T01:intron 35.0%
! TGGTCAAATGGACTTATACA+TGG - Chr4:78952484-78952503 MsG0480022947.01.T01:intron 35.0%
! TGGTCAAATGGATTTAGACA+TGG - Chr4:78952207-78952226 MsG0480022947.01.T01:intron 35.0%
! TGTCTACATTGATAGCTTCA+AGG - Chr4:78951777-78951796 MsG0480022947.01.T01:CDS 35.0%
! TTGATGTTTTCGATGGTTGT+TGG - Chr4:78952187-78952206 MsG0480022947.01.T01:intron 35.0%
! TTGGGTCTTACCATCAATTT+TGG + Chr4:78953971-78953990 None:intergenic 35.0%
! TTTGTTGGTTGTTGGTCAAA+TGG - Chr4:78952613-78952632 MsG0480022947.01.T01:intron 35.0%
!! AGAGAAGTCATTTTCAAACG+GGG - Chr4:78951753-78951772 MsG0480022947.01.T01:CDS 35.0%
!! GCTAATGGTGATGTTTTTGT+TGG - Chr4:78952457-78952476 MsG0480022947.01.T01:intron 35.0%
!! GGAGTTTGTAGATTTGCTAA+TGG - Chr4:78952234-78952253 MsG0480022947.01.T01:intron 35.0%
!! GTGATGTTTTTGATGGTTGT+TGG - Chr4:78952326-78952345 MsG0480022947.01.T01:intron 35.0%
!! GTTAATGGTAGTGTTTTCGA+TGG - Chr4:78951904-78951923 MsG0480022947.01.T01:intron 35.0%
!!! TTTTTTTCCAATTTCCGGTG+TGG + Chr4:78952266-78952285 None:intergenic 35.0%
AAAAATCTCCATAGAAGGCC+TGG + Chr4:78952805-78952824 None:intergenic 40.0%
AAAGGGAAAAGGGATGGAAA+AGG - Chr4:78952144-78952163 MsG0480022947.01.T01:intron 40.0%
AAAGGGAACATGGATGGAAA+AGG - Chr4:78952283-78952302 MsG0480022947.01.T01:intron 40.0%
AACAATATACGAGGGCGATT+GGG - Chr4:78952744-78952763 MsG0480022947.01.T01:intron 40.0%
AAGGGAAAAGGGATGGAAAA+GGG - Chr4:78952145-78952164 MsG0480022947.01.T01:intron 40.0%
AAGGGAACATGGATGGAAAA+GGG - Chr4:78952284-78952303 MsG0480022947.01.T01:intron 40.0%
AATGGAGTTAGACATGGATC+TGG - Chr4:78952352-78952371 MsG0480022947.01.T01:intron 40.0%
ACTTTCCCTTTCCATGGAAA+AGG + Chr4:78952708-78952727 None:intergenic 40.0%
AGAGATCATGACGATGAGAA+AGG - Chr4:78954158-78954177 MsG0480022947.01.T01:CDS 40.0%
AGGGAAAGGGATTATGAAGT+GGG - Chr4:78951882-78951901 MsG0480022947.01.T01:intron 40.0%
ATGATGTGAAATCTGCAGTG+AGG - Chr4:78953822-78953841 MsG0480022947.01.T01:intron 40.0%
ATGGAAAGGGAAAGTTCACA+AGG - Chr4:78952713-78952732 MsG0480022947.01.T01:intron 40.0%
ATGGACAAATGACAGGGAAA+GGG - Chr4:78951869-78951888 MsG0480022947.01.T01:intron 40.0%
CACACTGGACATTGGAAAAA+AGG - Chr4:78952126-78952145 MsG0480022947.01.T01:intron 40.0%
CTGTCAAGACCATTTCTGTA+TGG - Chr4:78953191-78953210 MsG0480022947.01.T01:intron 40.0%
GAACAATATATGAGGGCGAT+TGG - Chr4:78951842-78951861 MsG0480022947.01.T01:CDS 40.0%
GCAAATGGGGATGTTTATAG+AGG - Chr4:78951973-78951992 MsG0480022947.01.T01:intron 40.0%
GGAAAAAAAGGGAACATGGA+TGG - Chr4:78952277-78952296 MsG0480022947.01.T01:intron 40.0%
GGAAAGTTCACAAGGTCAAA+TGG - Chr4:78952721-78952740 MsG0480022947.01.T01:intron 40.0%
GGAATGTCTACATTGGAGAT+TGG - Chr4:78952536-78952555 MsG0480022947.01.T01:intron 40.0%
GGGATTATGAATTGGGCTAA+TGG - Chr4:78952442-78952461 MsG0480022947.01.T01:intron 40.0%
TGGAAAAAAGGGAAAAGGGA+TGG - Chr4:78952138-78952157 MsG0480022947.01.T01:intron 40.0%
TTCAAGGGTGAACTTTGTCA+TGG - Chr4:78951793-78951812 MsG0480022947.01.T01:CDS 40.0%
TTCGATGGTTGTTGGTCAAA+TGG - Chr4:78951919-78951938 MsG0480022947.01.T01:intron 40.0%
TTGTGAACTTTCCCTTTCCA+TGG + Chr4:78952714-78952733 None:intergenic 40.0%
TTTGTTGGTCGTTGGTCAAA+TGG - Chr4:78952472-78952491 MsG0480022947.01.T01:intron 40.0%
! AAACCCTTCGGATTTTCTTG+TGG + Chr4:78953234-78953253 None:intergenic 40.0%
! AATGGACTTAGACATGGATC+TGG - Chr4:78952631-78952650 MsG0480022947.01.T01:intron 40.0%
! GGGATTTTGAATAGGGCTAA+TGG - Chr4:78952583-78952602 MsG0480022947.01.T01:intron 40.0%
! GTAGTGTTTTCGATGGTTGT+TGG - Chr4:78951911-78951930 MsG0480022947.01.T01:intron 40.0%
! GTTCTGTTTTCGATGGTTGT+TGG - Chr4:78952049-78952068 MsG0480022947.01.T01:intron 40.0%
! TGGTCAAATGGACTTAGACA+TGG - Chr4:78952625-78952644 MsG0480022947.01.T01:intron 40.0%
! TGGTCAAATGGACTTAGAGA+TGG - Chr4:78952069-78952088 MsG0480022947.01.T01:intron 40.0%
!! ATGATGATGATGATGATGGG+AGG - Chr4:78954244-78954263 MsG0480022947.01.T01:CDS 40.0%
!! GCTAACGGTGATGTTTTTGA+TGG - Chr4:78952319-78952338 MsG0480022947.01.T01:intron 40.0%
!! GGGATTATGAAGTGGGTTAA+TGG - Chr4:78951889-78951908 MsG0480022947.01.T01:intron 40.0%
!! GTGATGTTTTTGTTGGTCGT+TGG - Chr4:78952464-78952483 MsG0480022947.01.T01:intron 40.0%
!! TGATGATGATGATGATGGGA+GGG - Chr4:78954245-78954264 MsG0480022947.01.T01:CDS 40.0%
!!! CTTTTTTCCAATGTCCAGTG+TGG + Chr4:78952128-78952147 None:intergenic 40.0%
AGGGAACATGGATGGAAAAG+GGG - Chr4:78952285-78952304 MsG0480022947.01.T01:intron 45.0%
CAGGGAAAGGGATTATGAAG+TGG - Chr4:78951881-78951900 MsG0480022947.01.T01:intron 45.0%
CATCGTCATGATCTCTGCAT+AGG + Chr4:78954154-78954173 None:intergenic 45.0%
GAACAATATACGAGGGCGAT+TGG - Chr4:78952743-78952762 MsG0480022947.01.T01:intron 45.0%
GATGGACAAATGACAGGGAA+AGG - Chr4:78951868-78951887 MsG0480022947.01.T01:intron 45.0%
GCAAACGGAGATGTCTTTAC+TGG - Chr4:78952388-78952407 MsG0480022947.01.T01:intron 45.0%
GCGAATGGGAATGTCTACAT+TGG - Chr4:78952529-78952548 MsG0480022947.01.T01:intron 45.0%
GGACTTATACATGGATCTGC+TGG - Chr4:78952493-78952512 MsG0480022947.01.T01:intron 45.0%
GGGATTATGAATTGGGCAAG+TGG - Chr4:78952027-78952046 MsG0480022947.01.T01:intron 45.0%
GGGGTTATGAATTGGGCTAA+CGG - Chr4:78952304-78952323 MsG0480022947.01.T01:intron 45.0%
GGGTCGATGGAGAAATGTTA+GGG - Chr4:78952764-78952783 MsG0480022947.01.T01:intron 45.0%
GGTGAACTTTGTCATGGCAA+CGG - Chr4:78951799-78951818 MsG0480022947.01.T01:CDS 45.0%
TAAAATGGTTGCAGACGGGT+TGG - Chr4:78953034-78953053 MsG0480022947.01.T01:intron 45.0%
TGATGATACCAGGCCTTCTA+TGG - Chr4:78952794-78952813 MsG0480022947.01.T01:intron 45.0%
TGGGTCGATGGAGAAATGTT+AGG - Chr4:78952763-78952782 MsG0480022947.01.T01:intron 45.0%
! ATGGCAACGGAAAGTACACA+TGG - Chr4:78951812-78951831 MsG0480022947.01.T01:CDS 45.0%
! GGGAACAGATTGATGATACC+AGG - Chr4:78952784-78952803 MsG0480022947.01.T01:intron 45.0%
!! GCAAGTGGTTCTGTTTTCGA+TGG - Chr4:78952042-78952061 MsG0480022947.01.T01:intron 45.0%
!! GGGTTGATGGACAAATGACA+GGG - Chr4:78951863-78951882 MsG0480022947.01.T01:intron 45.0%
!! TGGGTTGATGGACAAATGAC+AGG - Chr4:78951862-78951881 MsG0480022947.01.T01:intron 45.0%
!!! TTTTTATTTATTATGAATAT+AGG + Chr4:78953563-78953582 None:intergenic 5.0%
GCAAACGGGGACTTGTACTT+TGG - Chr4:78952667-78952686 MsG0480022947.01.T01:intron 50.0%
GCTAATGGGAATGTCCACAC+CGG - Chr4:78952249-78952268 MsG0480022947.01.T01:intron 50.0%
GGAATGTCCACACCGGAAAT+TGG - Chr4:78952256-78952275 MsG0480022947.01.T01:intron 50.0%
!! ATGATGATGGGAGGGCCATT+TGG - Chr4:78954253-78954272 MsG0480022947.01.T01:CDS 50.0%
!! TATGAGGGCGATTGGGTTGA+TGG - Chr4:78951850-78951869 MsG0480022947.01.T01:CDS 50.0%
GCAAATGGGGATGTCCACAC+TGG - Chr4:78952111-78952130 MsG0480022947.01.T01:intron 55.0%
GGGATGTCCACACTGGACAT+TGG - Chr4:78952118-78952137 MsG0480022947.01.T01:intron 55.0%
TACGAGGGCGATTGGGTCGA+TGG - Chr4:78952751-78952770 MsG0480022947.01.T01:intron 60.0%
Chromosome Type Strat End Strand Name
Chr4 gene 78951727 78954311 78951727 ID=MsG0480022947.01;Name=MsG0480022947.01
Chr4 mRNA 78951727 78954311 78951727 ID=MsG0480022947.01.T01;Parent=MsG0480022947.01;Name=MsG0480022947.01.T01;_AED=0.49;_eAED=0.56;_QI=0|0|0|1|1|1|3|0|342
Chr4 exon 78953837 78954311 78953837 ID=MsG0480022947.01.T01:exon:23555;Parent=MsG0480022947.01.T01
Chr4 exon 78953350 78953751 78953350 ID=MsG0480022947.01.T01:exon:23554;Parent=MsG0480022947.01.T01
Chr4 exon 78951727 78951878 78951727 ID=MsG0480022947.01.T01:exon:23553;Parent=MsG0480022947.01.T01
Chr4 CDS 78953837 78954311 78953837 ID=MsG0480022947.01.T01:cds;Parent=MsG0480022947.01.T01
Chr4 CDS 78953350 78953751 78953350 ID=MsG0480022947.01.T01:cds;Parent=MsG0480022947.01.T01
Chr4 CDS 78951727 78951878 78951727 ID=MsG0480022947.01.T01:cds;Parent=MsG0480022947.01.T01
Gene Sequence

>MsG0480022947.01.T01

ATGTTTCTTGTAAAGTGTAGTTTTAAAGAGAAGTCATTTTCAAACGGGGATGTCTACATTGATAGCTTCAAGGGTGAACTTTGTCATGGCAACGGAAAGTACACATGGTTAAATGGAACAATATATGAGGGCGATTGGGTTGATGGACAAATGACAGGGAAAGGGATTATGAAGTGGGTTAATGGTAGTGTTTTCGATGGTTGTTGGTCAAATGGACTTAAAGATGGATATGGAGTTTATAGATTTGCAAATGGGGATGTTTATAGAGGAAATTGGGAAAAAGGGAAAATAGAAGGAAAAGGGATTATGAATTGGGCAAGTGGTTCTGTTTTCGATGGTTGTTGGTCAAATGGACTTAGAGATGGATATGGAGTTTATAGATTTGCAAATGGGGATGTCCACACTGGACATTGGAAAAAAGGGAAAAGGGATGGAAAAGGGATTATGAGATGGGCTAATGTTGATGTTTTCGATGGGAACATGGATGGAAAAGGGGTTATGAATTGGGCTAACGGTGATGTTTTTGATGGTTGTTGGTTAAATGGAGTTAGACATGGATCTGGAATTTATACAAATGCAAACGGAGATGTCTTTACTGGAAAATGGAAAAATATGAAAAAGGATGGGAATGGGATTATGAATTGGGCTAATGGTGATGTTTTTGTTGGTCGTTGGTCAAATGGACTTATACATGGATCTGCTGGAGTTTATAGATTTGCGAATGGGAATGTCTACATTGGAGATTGGAAAAAAGGGAAAAGGGATGGAAAAGGGATTTTGAATAGGGCTAATGGTGATGTATTTGTTGGTTGTTGGTCAAATGGACTTAGACATGGATCTGGAGTTTATAGATTTGCAAACGGGGACTTGTACTTTGAGATCATGACGATGAGAAAGGCTGATCTCATATACTTCATACTGAACACTACTCATGGACATGATGATGATGATGATGATGATGATGATGATGATGATGATGGGAGGGCCATTTGGTATAGAAGATATGAAGATGTACAGTCAGGAATTTAG

Protein sequence

>MsG0480022947.01.T01

MFLVKCSFKEKSFSNGDVYIDSFKGELCHGNGKYTWLNGTIYEGDWVDGQMTGKGIMKWVNGSVFDGCWSNGLKDGYGVYRFANGDVYRGNWEKGKIEGKGIMNWASGSVFDGCWSNGLRDGYGVYRFANGDVHTGHWKKGKRDGKGIMRWANVDVFDGNMDGKGVMNWANGDVFDGCWLNGVRHGSGIYTNANGDVFTGKWKNMKKDGNGIMNWANGDVFVGRWSNGLIHGSAGVYRFANGNVYIGDWKKGKRDGKGILNRANGDVFVGCWSNGLRHGSGVYRFANGDLYFEIMTMRKADLIYFILNTTHGHDDDDDDDDDDDDDGRAIWYRRYEDVQSGI*