AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480021869.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480021869.01.T01 MTR_4g478130 98.137 161 3 0 67 227 1 161 1.19e-108 317
MsG0480021869.01.T01 MTR_4g478130 78.261 161 35 0 249 409 1 161 2.76e-84 254
MsG0480021869.01.T01 MTR_4g478140 93.210 162 10 1 249 409 1 162 4.40e-101 297
MsG0480021869.01.T01 MTR_4g478140 79.012 162 33 1 67 227 1 162 6.24e-84 254
MsG0480021869.01.T01 MTR_3g055130 31.746 126 79 2 249 371 1 122 7.53e-14 69.3
MsG0480021869.01.T01 MTR_3g055130 38.144 97 58 1 101 195 34 130 1.14e-12 65.9
MsG0480021869.01.T01 MTR_3g055120 35.106 94 59 2 283 375 34 126 3.68e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 99 sgRNAs with CRISPR-Local

Find 319 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAGGTGGATACTTAGAATT+TGG 0.200939 4:+65379685 MsG0480021869.01.T01:CDS
TCCACCTTCTGAAATCTTTC+AGG 0.221004 4:-65375335 None:intergenic
CTCTTTGGCACTCTTGCTAT+TGG 0.264799 4:+65375290 MsG0480021869.01.T01:CDS
TGAGCCATTGGCTAACATTA+TGG 0.279776 4:+65379831 MsG0480021869.01.T01:CDS
CTCTTTGGCACCATTGGTAT+TGG 0.293635 4:+65378399 MsG0480021869.01.T01:CDS
ATAGGTTATAAAATGATTAC+TGG 0.333603 4:+65380046 MsG0480021869.01.T01:three_prime_UTR
AGATCCCATGCTTCATTTGC+TGG 0.334877 4:-65378378 None:intergenic
TTGCAGCCTTGTTTCTGTTA+AGG 0.338338 4:-65379870 None:intergenic
TCCACCTTCTGAAACAATTC+AGG 0.368745 4:-65378444 None:intergenic
AATTTCTCTTTGTAACCAGC+TGG 0.370226 4:-65379616 None:intergenic
AGATCCCATGCTTCACTTGC+TGG 0.373899 4:-65375269 None:intergenic
GGTGAGACTCATGAGAATAA+AGG 0.379385 4:+65374573 MsG0480021869.01.T01:CDS
GAAGGTGGATGCTTAGATCT+TGG 0.381293 4:+65375888 MsG0480021869.01.T01:CDS
AAAGAGATTAAGAAGATGTT+TGG 0.386136 4:+65375215 MsG0480021869.01.T01:CDS
CTACAATGTCTGCCAATTGC+TGG 0.390692 4:-65376034 None:intergenic
ATTTGTTTCCATTGAGCCAT+TGG 0.398190 4:+65379819 MsG0480021869.01.T01:CDS
GGATGTGGTGTATGTGGTGC+GGG 0.398785 4:-65375177 None:intergenic
TCAGGTTTACCTGGCCCAAC+TGG 0.416975 4:+65375804 MsG0480021869.01.T01:intron
TTGAAGGAGATGGAGGGGTT+GGG 0.418155 4:+65375363 MsG0480021869.01.T01:CDS
TGCAATCTTGAGAAACATAT+AGG 0.420731 4:+65380028 MsG0480021869.01.T01:three_prime_UTR
ACTTGTTTCCATCCAGCAAT+TGG 0.424661 4:+65376022 MsG0480021869.01.T01:CDS
GTGAGACTCATGAGAATAAA+GGG 0.431534 4:+65374574 MsG0480021869.01.T01:CDS
TCTTTGTAACCAGCTGGGCC+AGG 0.438011 4:-65379610 None:intergenic
ATTGAAGGAGGGAGACAAAC+AGG 0.442934 4:+65374552 MsG0480021869.01.T01:CDS
TGGGATCTCTTTGGCACCAT+TGG 0.444724 4:+65378393 MsG0480021869.01.T01:CDS
AATGAAGCATGGGATCTCTT+TGG 0.446830 4:+65378384 MsG0480021869.01.T01:CDS
AGTGAAGCATGGGATCTCTT+TGG 0.449536 4:+65375275 MsG0480021869.01.T01:CDS
TTGCATCCTTGTTTCTGTTG+AGG 0.456610 4:-65376073 None:intergenic
ATTGAAGGAGATGGAGGGGT+TGG 0.457658 4:+65375362 MsG0480021869.01.T01:CDS
GAGGTAGAGGTAGTTGAAGG+TGG 0.467227 4:+65375873 MsG0480021869.01.T01:CDS
ATGCTTCATTTGCTGGCACA+TGG 0.468256 4:-65378371 None:intergenic
TGGAAAAGAAAGAAGATGTC+TGG 0.469794 4:+65378324 MsG0480021869.01.T01:CDS
ATTGGAAAACTCGTTGAGGC+AGG 0.475676 4:+65378417 MsG0480021869.01.T01:CDS
GGAGTTTGATCAGGTTTACC+TGG 0.477722 4:+65375795 MsG0480021869.01.T01:intron
TACACAAACTATTTGGGATG+TGG 0.481481 4:-65375192 None:intergenic
TTGGCAGACATTGTAGAAGT+TGG 0.481902 4:+65376041 MsG0480021869.01.T01:CDS
CACACTATTTAGAGTTCGTA+TGG 0.490157 4:+65375914 MsG0480021869.01.T01:CDS
CGTATGGAAGTGATAGAGAA+AGG 0.493358 4:+65375930 MsG0480021869.01.T01:CDS
TTGTCTCCCTCCTTCAATGT+CGG 0.495095 4:-65374547 None:intergenic
AAAACATTGAGTGCAGGAAC+AGG 0.497258 4:+65374597 MsG0480021869.01.T01:CDS
CAGAAGGTGGAGCTAATTGA+AGG 0.500124 4:+65375347 MsG0480021869.01.T01:CDS
CAGAAGGTGGAGCTAATTGA+AGG 0.500124 4:+65378456 MsG0480021869.01.T01:CDS
AATGTTAGCCAATGGCTCAA+TGG 0.500199 4:-65379827 None:intergenic
AAAGAGGTAGAGGTAGTTGA+AGG 0.502314 4:+65375870 MsG0480021869.01.T01:CDS
GGTGAGAGAACCGACATTGA+AGG 0.513859 4:+65374537 MsG0480021869.01.T01:CDS
GTTTCTGTTAAGGTAAGTCT+TGG 0.514058 4:-65379860 None:intergenic
GTGGAGCTAATTGAAGGAGA+TGG 0.515580 4:+65375353 MsG0480021869.01.T01:CDS
GTGGAGCTAATTGAAGGAGA+TGG 0.515580 4:+65378462 MsG0480021869.01.T01:CDS
AAAGAAGCAGAGGTAGTTGA+AGG 0.515702 4:+65379667 MsG0480021869.01.T01:CDS
ATTGAAGGAGATGGAGGGGT+TGG 0.515980 4:+65378471 MsG0480021869.01.T01:CDS
ACAGGTACACCTGGCCCAGC+TGG 0.517233 4:+65379601 MsG0480021869.01.T01:intron
AGAGTATGAAGTCAAGGAAG+AGG 0.520181 4:+65375983 MsG0480021869.01.T01:CDS
AATGGAAACAAATGAGGCAT+TGG 0.521286 4:-65379809 None:intergenic
GCCTGAATTGTTTCAGAAGG+TGG 0.521850 4:+65378443 MsG0480021869.01.T01:CDS
AAAGCACATCAAAGAGGTAG+AGG 0.522939 4:+65375860 MsG0480021869.01.T01:CDS
TGGCACTCTTGCTATTGGAA+AGG 0.531710 4:+65375295 MsG0480021869.01.T01:CDS
TACATTAGAGTATGAAGTCA+AGG 0.533592 4:+65375977 MsG0480021869.01.T01:CDS
GAGCTAATTGAAGGAGATGG+AGG 0.540375 4:+65375356 MsG0480021869.01.T01:CDS
GAGCTAATTGAAGGAGATGG+AGG 0.540375 4:+65378465 MsG0480021869.01.T01:CDS
CTCAAACTCACATTCACTCC+AGG 0.556420 4:+65375392 MsG0480021869.01.T01:CDS
ATTTCTCTTTGTAACCAGCT+GGG 0.558097 4:-65379615 None:intergenic
TTCAAAATAAGACTAGAGAA+AGG 0.558962 4:+65379918 MsG0480021869.01.T01:three_prime_UTR
CTCAAACTCACATTCACTCC+AGG 0.561646 4:+65378501 MsG0480021869.01.T01:CDS
AAAGGGAAAACATTGAGTGC+AGG 0.562207 4:+65374591 MsG0480021869.01.T01:CDS
GGGATGTGGTGTATGTGGTG+CGG 0.562331 4:-65375178 None:intergenic
TATACTTCACATCAAAATTG+TGG 0.571099 4:+65375129 MsG0480021869.01.T01:CDS
CTACCTCTGCTTCTTTGATG+CGG 0.573581 4:-65379660 None:intergenic
ATGTGCCAGCAAATGAAGCA+TGG 0.580036 4:+65378373 MsG0480021869.01.T01:CDS
AGCTAATTGAAGGAGATGGA+GGG 0.580245 4:+65375357 MsG0480021869.01.T01:CDS
AGCTAATTGAAGGAGATGGA+GGG 0.580245 4:+65378466 MsG0480021869.01.T01:CDS
TATTTGGGATGTGGTGTATG+TGG 0.581504 4:-65375183 None:intergenic
GCTAATTGAAGGAGATGGAG+GGG 0.586950 4:+65375358 MsG0480021869.01.T01:CDS
GCTAATTGAAGGAGATGGAG+GGG 0.586950 4:+65378467 MsG0480021869.01.T01:CDS
AATGTCTGCCAATTGCTGGA+TGG 0.587707 4:-65376030 None:intergenic
ACGTGAATGGCAGGGAAAAG+GGG 0.590439 4:+65374516 None:intergenic
TGTGCCAGCAAATGAAGCAT+GGG 0.591233 4:+65378374 MsG0480021869.01.T01:CDS
GGAGTTTGAACAGGTACACC+TGG 0.591936 4:+65379592 MsG0480021869.01.T01:intron
TGGCTCAATGGAAACAAATG+AGG 0.595922 4:-65379815 None:intergenic
GAAGCAGAGGTAGTTGAAGG+TGG 0.597763 4:+65379670 MsG0480021869.01.T01:CDS
GAGAGAACCGACATTGAAGG+AGG 0.600612 4:+65374540 MsG0480021869.01.T01:CDS
GCCTGAAAGATTTCAGAAGG+TGG 0.605828 4:+65375334 MsG0480021869.01.T01:CDS
TAGGTTATAAAATGATTACT+GGG 0.612420 4:+65380047 MsG0480021869.01.T01:three_prime_UTR
TGCTATTGGAAAGGTCGTTG+AGG 0.616559 4:+65375304 MsG0480021869.01.T01:CDS
ATGTGCCAGCAAGTGAAGCA+TGG 0.621600 4:+65375264 MsG0480021869.01.T01:CDS
TTGGAAAACTCGTTGAGGCA+GGG 0.622529 4:+65378418 MsG0480021869.01.T01:CDS
GATGCCTGAATTGTTTCAGA+AGG 0.622989 4:+65378440 MsG0480021869.01.T01:CDS
GATGCCTGAAAGATTTCAGA+AGG 0.625914 4:+65375331 MsG0480021869.01.T01:CDS
ACTTCCATAATGTTAGCCAA+TGG 0.636775 4:-65379835 None:intergenic
TGTGCCAGCAAGTGAAGCAT+GGG 0.638293 4:+65375265 MsG0480021869.01.T01:CDS
CATTGAGTGCAGGAACAGGA+AGG 0.640158 4:+65374601 MsG0480021869.01.T01:CDS
GATGTGGTGTATGTGGTGCG+GGG 0.645307 4:-65375176 None:intergenic
TAATGAAAAGCACATCAAAG+AGG 0.647932 4:+65375854 MsG0480021869.01.T01:CDS
AGAGAACCGACATTGAAGGA+GGG 0.655983 4:+65374541 MsG0480021869.01.T01:CDS
AAACCGCATCAAAGAAGCAG+AGG 0.668061 4:+65379657 MsG0480021869.01.T01:CDS
GACTTACCTTAACAGAAACA+AGG 0.675588 4:+65379864 MsG0480021869.01.T01:CDS
TGGTATTGGAAAACTCGTTG+AGG 0.676186 4:+65378413 MsG0480021869.01.T01:CDS
TTGCTGGATGGAAACAAGTG+CGG 0.676967 4:-65376018 None:intergenic
TCATCTGAGAAATAATACAA+AGG 0.684644 4:-65380003 None:intergenic
AAATTACCTCAACAGAAACA+AGG 0.697908 4:+65376067 MsG0480021869.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAAAATATATATA+AGG - Chr4:65376223-65376242 None:intergenic 0.0%
!! AAAAGTAACAATAAAAATAA+AGG + Chr4:65378085-65378104 MsG0480021869.01.T01:intron 10.0%
!! AATAAAAAAAAGTTGTTAAA+CGG + Chr4:65377978-65377997 MsG0480021869.01.T01:intron 10.0%
!! GAATTTAACAATAAATTTAA+CGG + Chr4:65378946-65378965 MsG0480021869.01.T01:intron 10.0%
!! GTTATGTAAAAAAATTATAT+TGG + Chr4:65376883-65376902 MsG0480021869.01.T01:intron 10.0%
!! TAAATAGAAGTTTATTTAAA+TGG - Chr4:65377953-65377972 None:intergenic 10.0%
!! TTAAATAAACTTCTATTTAT+CGG + Chr4:65377954-65377973 MsG0480021869.01.T01:intron 10.0%
!!! TTAATTGTGTTTTTTTTTAT+AGG - Chr4:65379543-65379562 None:intergenic 10.0%
!!! TTATTAATATACTTTATTTG+GGG - Chr4:65379452-65379471 None:intergenic 10.0%
!!! TTTTTATATGTATGTATTAT+AGG - Chr4:65378589-65378608 None:intergenic 10.0%
!! AATAATCCCAAAATATATTA+CGG + Chr4:65378219-65378238 MsG0480021869.01.T01:intron 15.0%
!! AGAATGTAAATTGTATAATT+TGG - Chr4:65376725-65376744 None:intergenic 15.0%
!! ATATAATAACTATATACACA+TGG + Chr4:65375077-65375096 MsG0480021869.01.T01:intron 15.0%
!! GAATTAACATACTTAATTAT+GGG + Chr4:65375709-65375728 MsG0480021869.01.T01:intron 15.0%
!! TGAATTAACATACTTAATTA+TGG + Chr4:65375708-65375727 MsG0480021869.01.T01:intron 15.0%
!! TGTGTATATAGTTATTATAT+TGG - Chr4:65375077-65375096 None:intergenic 15.0%
!! TTTATATATCATGAAAAATC+TGG + Chr4:65378617-65378636 MsG0480021869.01.T01:intron 15.0%
!!! AATGTAAATTGATTTATGTT+TGG + Chr4:65378905-65378924 MsG0480021869.01.T01:intron 15.0%
!!! CTCTAAAATTTAATTTACAA+GGG - Chr4:65377132-65377151 None:intergenic 15.0%
!!! TAACATAACATTAATTGTTT+TGG + Chr4:65375770-65375789 MsG0480021869.01.T01:intron 15.0%
!!! TCTCTAAAATTTAATTTACA+AGG - Chr4:65377133-65377152 None:intergenic 15.0%
!!! TTCAATTATGTCATTTTAAT+TGG - Chr4:65374991-65375010 None:intergenic 15.0%
!! AACTAAAAGAATCTATTTGA+AGG - Chr4:65374813-65374832 None:intergenic 20.0%
!! AAGTTTCAAAAGTTTCAAAT+AGG - Chr4:65374944-65374963 None:intergenic 20.0%
!! AATACTAAATCCAAATCTAA+AGG + Chr4:65379494-65379513 MsG0480021869.01.T01:intron 20.0%
!! ATAATCCCAAAATATATTAC+GGG + Chr4:65378220-65378239 MsG0480021869.01.T01:intron 20.0%
!! ATAGGTTATAAAATGATTAC+TGG + Chr4:65380046-65380065 MsG0480021869.01.T01:three_prime_UTR 20.0%
!! ATTGCTAATATATCAATGTA+TGG - Chr4:65378262-65378281 None:intergenic 20.0%
!! CAAATAGACATTTAATATGA+TGG - Chr4:65376655-65376674 None:intergenic 20.0%
!! GAATTAATGAAACATAATGT+TGG - Chr4:65376197-65376216 None:intergenic 20.0%
!! TAGGTTATAAAATGATTACT+GGG + Chr4:65380047-65380066 MsG0480021869.01.T01:three_prime_UTR 20.0%
!! TCTTCATTACAATATCTATT+TGG - Chr4:65377799-65377818 None:intergenic 20.0%
!! TGTAATCATGTTAATCATAA+TGG + Chr4:65376387-65376406 MsG0480021869.01.T01:intron 20.0%
!! TTCAAAAGTTTCAAACTAAA+AGG + Chr4:65374863-65374882 MsG0480021869.01.T01:intron 20.0%
!! TTGAAACTTTCAAAACTTAA+AGG + Chr4:65375006-65375025 MsG0480021869.01.T01:intron 20.0%
!! TTGGAAATTCAATATTTGTT+TGG + Chr4:65378811-65378830 MsG0480021869.01.T01:intron 20.0%
!!! AATAAGATACATCTTGTTTT+TGG - Chr4:65377454-65377473 None:intergenic 20.0%
!!! ATAACATTAATTGTTTTGGT+TGG + Chr4:65375774-65375793 MsG0480021869.01.T01:intron 20.0%
!!! ATTGTGTTTTTTTTTATAGG+AGG - Chr4:65379540-65379559 None:intergenic 20.0%
!!! ATTTAAATGGTCTTATCAAA+AGG - Chr4:65377940-65377959 None:intergenic 20.0%
!!! TCAAAAGAGTAAATATTTTG+TGG + Chr4:65378304-65378323 MsG0480021869.01.T01:CDS 20.0%
!!! TTGAAACTTTTGAAACTTAA+AGG + Chr4:65374946-65374965 MsG0480021869.01.T01:intron 20.0%
!!! TTGAAACTTTTGAAACTTAA+AGG - Chr4:65374965-65374946 None:intergenic 20.0%
!!! TTGTGTTTTTTTTTATAGGA+GGG - Chr4:65379539-65379558 None:intergenic 20.0%
!!! TTTTCATATATAGTTGTGTT+AGG - Chr4:65378566-65378585 None:intergenic 20.0%
! AAAGAACTAAAAGTAGCATT+TGG + Chr4:65375051-65375070 MsG0480021869.01.T01:intron 25.0%
! AAAGAGATTAAGAAGATGTT+TGG + Chr4:65375215-65375234 MsG0480021869.01.T01:CDS 25.0%
! AAATATGTCTATGTACAAGT+GGG + Chr4:65375618-65375637 MsG0480021869.01.T01:intron 25.0%
! AAATGGCATGATAAAAAGAA+GGG + Chr4:65376861-65376880 MsG0480021869.01.T01:intron 25.0%
! AATCTAGATATTCATGTGTA+TGG + Chr4:65378750-65378769 MsG0480021869.01.T01:intron 25.0%
! ACTCAAAAAACCTTTAGATT+TGG - Chr4:65379507-65379526 None:intergenic 25.0%
! ATACAAGTTCAATATAAGAG+AGG - Chr4:65377911-65377930 None:intergenic 25.0%
! ATGTATCTTATTGACATATG+TGG + Chr4:65377462-65377481 MsG0480021869.01.T01:intron 25.0%
! ATTTGAGAAATAGTACATGT+CGG - Chr4:65376317-65376336 None:intergenic 25.0%
! CTAGAGAAAAGAAAAACTTA+TGG + Chr4:65376133-65376152 MsG0480021869.01.T01:intron 25.0%
! TAAACATGTTTATGTACAAG+TGG + Chr4:65378702-65378721 MsG0480021869.01.T01:intron 25.0%
! TAATCCCAAAATATATTACG+GGG + Chr4:65378221-65378240 MsG0480021869.01.T01:intron 25.0%
! TACATACTAGAATAGAGAAA+TGG + Chr4:65376844-65376863 MsG0480021869.01.T01:intron 25.0%
! TAGTTTCTTTACATCTTGAA+GGG - Chr4:65376417-65376436 None:intergenic 25.0%
! TATACTTCACATCAAAATTG+TGG + Chr4:65375129-65375148 MsG0480021869.01.T01:CDS 25.0%
! TCATCTGAGAAATAATACAA+AGG - Chr4:65380006-65380025 None:intergenic 25.0%
! TTCAAAATAAGACTAGAGAA+AGG + Chr4:65379918-65379937 MsG0480021869.01.T01:three_prime_UTR 25.0%
! TTCTATCGTCAAAATCAATT+CGG + Chr4:65379023-65379042 MsG0480021869.01.T01:intron 25.0%
!! AAAAAGTACACCATACAATT+TGG + Chr4:65374700-65374719 MsG0480021869.01.T01:intron 25.0%
!! AACTTTTCTTTTAAACCAGT+TGG - Chr4:65375822-65375841 None:intergenic 25.0%
!! AATGGATTCAAACAAAAAGT+TGG + Chr4:65377631-65377650 MsG0480021869.01.T01:intron 25.0%
!! ACTTTTCTTTTAAACCAGTT+GGG - Chr4:65375821-65375840 None:intergenic 25.0%
!! CTCTTTTACACAAACTATTT+GGG - Chr4:65375201-65375220 None:intergenic 25.0%
!! TCTCTTTTACACAAACTATT+TGG - Chr4:65375202-65375221 None:intergenic 25.0%
!! TGAACAGATAAAGAAACTTT+TGG + Chr4:65378792-65378811 MsG0480021869.01.T01:intron 25.0%
!! TGAATTATGTTACTGTGTTT+TGG - Chr4:65379080-65379099 None:intergenic 25.0%
!! TGTGACACTTACTATTTTAT+CGG - Chr4:65377856-65377875 None:intergenic 25.0%
!!! AAATTTTAGAGACATCAATC+CGG + Chr4:65377141-65377160 MsG0480021869.01.T01:intron 25.0%
!!! AACTTTTTGTTTGAATCCAT+TGG - Chr4:65377632-65377651 None:intergenic 25.0%
!!! CGTTTTGAAATAATAGAGAA+AGG + Chr4:65379727-65379746 MsG0480021869.01.T01:CDS 25.0%
!!! CTCTTTTGAGTTTTAAAATG+TGG - Chr4:65378293-65378312 None:intergenic 25.0%
!!! GTAACATTGATTGTTTTGAT+TGG + Chr4:65379571-65379590 MsG0480021869.01.T01:intron 25.0%
!!! TCACAACAAAGTTTTTAGAA+AGG + Chr4:65376554-65376573 MsG0480021869.01.T01:intron 25.0%
AAAGATGGTCCTAAACTAAA+CGG + Chr4:65378170-65378189 MsG0480021869.01.T01:intron 30.0%
AAAGTTGTTTGGATGTTACA+AGG - Chr4:65377256-65377275 None:intergenic 30.0%
AAATTACCTCAACAGAAACA+AGG + Chr4:65376067-65376086 MsG0480021869.01.T01:CDS 30.0%
AACACTCTTAACTATGCTTA+TGG + Chr4:65377396-65377415 MsG0480021869.01.T01:intron 30.0%
AAGAAATGCTAACTAGTGTT+TGG - Chr4:65376927-65376946 None:intergenic 30.0%
AATATGTCTATGTACAAGTG+GGG + Chr4:65375619-65375638 MsG0480021869.01.T01:intron 30.0%
AATGGATACCAAAAACAAGA+TGG + Chr4:65377419-65377438 MsG0480021869.01.T01:intron 30.0%
ACAACAGATCGAAAGAATTT+AGG - Chr4:65376496-65376515 None:intergenic 30.0%
AGAACAAAAAGGACAAAAGA+TGG + Chr4:65378155-65378174 MsG0480021869.01.T01:intron 30.0%
ATGGATACCAAAAACAAGAT+GGG + Chr4:65377420-65377439 MsG0480021869.01.T01:intron 30.0%
ATTACCAAATTCTCACATGT+AGG - Chr4:65377698-65377717 None:intergenic 30.0%
CAAATATGTCTATGTACAAG+TGG + Chr4:65375617-65375636 MsG0480021869.01.T01:intron 30.0%
CAACAGATCGAAAGAATTTA+GGG - Chr4:65376495-65376514 None:intergenic 30.0%
CACATGAATATCTAGATTCT+AGG - Chr4:65378748-65378767 None:intergenic 30.0%
CTAGTTTCTTTACATCTTGA+AGG - Chr4:65376418-65376437 None:intergenic 30.0%
CTATAGATTCATCATGTGTT+TGG + Chr4:65375661-65375680 MsG0480021869.01.T01:intron 30.0%
GAAACTTAAAGGACTAACTT+GGG + Chr4:65374957-65374976 MsG0480021869.01.T01:intron 30.0%
GAAATGGCATGATAAAAAGA+AGG + Chr4:65376860-65376879 MsG0480021869.01.T01:intron 30.0%
GAAGCTATACAAGAAAATAG+AGG - Chr4:65376627-65376646 None:intergenic 30.0%
GAGACATCAATAGAACAAAA+AGG + Chr4:65378144-65378163 MsG0480021869.01.T01:intron 30.0%
GAGCTACAAATTACATTAGA+AGG - Chr4:65379239-65379258 None:intergenic 30.0%
GCACATGTGATAAGATTTAA+GGG + Chr4:65377829-65377848 MsG0480021869.01.T01:intron 30.0%
GGCAATACTTAAAAGTTGTT+TGG - Chr4:65377267-65377286 None:intergenic 30.0%
GGGTCAAATATATCATAACT+TGG - Chr4:65377659-65377678 None:intergenic 30.0%
TACATTAGAGTATGAAGTCA+AGG + Chr4:65375977-65375996 MsG0480021869.01.T01:CDS 30.0%
TATGTAGTGAGGTTTATAAG+TGG - Chr4:65376830-65376849 None:intergenic 30.0%
TCTTAACTATGCTTATGGAA+TGG + Chr4:65377401-65377420 MsG0480021869.01.T01:intron 30.0%
TGAAACTTAAAGGACTAACT+TGG + Chr4:65374956-65374975 MsG0480021869.01.T01:intron 30.0%
TGCAATCTTGAGAAACATAT+AGG + Chr4:65380028-65380047 MsG0480021869.01.T01:three_prime_UTR 30.0%
TGCACATGTGATAAGATTTA+AGG + Chr4:65377828-65377847 MsG0480021869.01.T01:intron 30.0%
! AATTGCTCAACTAGCTTATA+TGG + Chr4:65377769-65377788 MsG0480021869.01.T01:intron 30.0%
! ACTAACCCCGTAATATATTT+TGG - Chr4:65378229-65378248 None:intergenic 30.0%
! ATGTTAGAAGTATACTCTCA+AGG + Chr4:65376361-65376380 MsG0480021869.01.T01:intron 30.0%
! ATTTTCAACCAAGTGATTCT+AGG + Chr4:65376287-65376306 MsG0480021869.01.T01:intron 30.0%
! CATGTGAGAATTTGGTAATT+TGG + Chr4:65377699-65377718 MsG0480021869.01.T01:intron 30.0%
! CTAACCCCGTAATATATTTT+GGG - Chr4:65378228-65378247 None:intergenic 30.0%
! GAAAATTTGTTCTTCAACCT+TGG - Chr4:65376273-65376292 None:intergenic 30.0%
! TAATGAAAAGCACATCAAAG+AGG + Chr4:65375854-65375873 MsG0480021869.01.T01:CDS 30.0%
! TAATTTGGCTAGCTGTAATT+TGG - Chr4:65376710-65376729 None:intergenic 30.0%
! TGACAAAAAGTGTGTTCAAA+TGG - Chr4:65377087-65377106 None:intergenic 30.0%
! TTGTTGTATCATGAGCATTT+TGG + Chr4:65375530-65375549 MsG0480021869.01.T01:intron 30.0%
!! ATAGTTAAGAGTGTTTGACT+TGG - Chr4:65377391-65377410 None:intergenic 30.0%
!! ATCATCATTTTCTGTCGTTT+AGG - Chr4:65379293-65379312 None:intergenic 30.0%
!!! ATTCGAAACTTTTGAAACAG+TGG + Chr4:65374890-65374909 MsG0480021869.01.T01:intron 30.0%
!!! CTGTGTTTTGGTTTCAATTT+TGG - Chr4:65379068-65379087 None:intergenic 30.0%
!!! TCTTATTTTCTATCCATCAC+CGG - Chr4:65374672-65374691 None:intergenic 30.0%
!!! TGTTTTGGTTTCAATTTTGG+AGG - Chr4:65379065-65379084 None:intergenic 30.0%
AAGGTGACATTATCAGTACA+TGG + Chr4:65374620-65374639 MsG0480021869.01.T01:intron 35.0%
AATGGAAACAAATGAGGCAT+TGG - Chr4:65379812-65379831 None:intergenic 35.0%
AATTTCTCTTTGTAACCAGC+TGG - Chr4:65379619-65379638 None:intergenic 35.0%
ACATGTTTATGTACAAGTGG+AGG + Chr4:65378705-65378724 MsG0480021869.01.T01:intron 35.0%
ACTTCCATAATGTTAGCCAA+TGG - Chr4:65379838-65379857 None:intergenic 35.0%
AGACATCACATTTGATATGC+AGG - Chr4:65375451-65375470 None:intergenic 35.0%
AGCTAGTTGAGCAATTATCT+TGG - Chr4:65377765-65377784 None:intergenic 35.0%
AGTACACCATACAATTTGGT+AGG + Chr4:65374704-65374723 MsG0480021869.01.T01:intron 35.0%
ATAGCGTAGAGCTATCAAAA+GGG + Chr4:65379357-65379376 MsG0480021869.01.T01:intron 35.0%
ATATGTCTATGTACAAGTGG+GGG + Chr4:65375620-65375639 MsG0480021869.01.T01:intron 35.0%
ATTTCTCTTTGTAACCAGCT+GGG - Chr4:65379618-65379637 None:intergenic 35.0%
ATTTGTTTCCATTGAGCCAT+TGG + Chr4:65379819-65379838 MsG0480021869.01.T01:CDS 35.0%
CATAGTCCTACCAAATTGTA+TGG - Chr4:65374713-65374732 None:intergenic 35.0%
CATGTTTATGTACAAGTGGA+GGG + Chr4:65378706-65378725 MsG0480021869.01.T01:intron 35.0%
CTCTATTCTAGTATGTAGTG+AGG - Chr4:65376841-65376860 None:intergenic 35.0%
CTTCATGAGTCTAACTCAAT+TGG - Chr4:65375477-65375496 None:intergenic 35.0%
GAAGGTGGATACTTAGAATT+TGG + Chr4:65379685-65379704 MsG0480021869.01.T01:CDS 35.0%
GACATCACATTTGATATGCA+GGG - Chr4:65375450-65375469 None:intergenic 35.0%
GACTTACCTTAACAGAAACA+AGG + Chr4:65379864-65379883 MsG0480021869.01.T01:CDS 35.0%
GTGAGACTCATGAGAATAAA+GGG + Chr4:65374574-65374593 MsG0480021869.01.T01:CDS 35.0%
GTGTATGGAAAGAATTCTTG+TGG + Chr4:65378765-65378784 MsG0480021869.01.T01:intron 35.0%
GTTTCTGTTAAGGTAAGTCT+TGG - Chr4:65379863-65379882 None:intergenic 35.0%
TACCAAAAACAAGATGGGAA+TGG + Chr4:65377425-65377444 MsG0480021869.01.T01:intron 35.0%
TAGTGAGGTTTATAAGTGGA+TGG - Chr4:65376826-65376845 None:intergenic 35.0%
TATAGCGTAGAGCTATCAAA+AGG + Chr4:65379356-65379375 MsG0480021869.01.T01:intron 35.0%
TGGAAAAGAAAGAAGATGTC+TGG + Chr4:65378324-65378343 MsG0480021869.01.T01:CDS 35.0%
TGGTAGGACTATGTAATCTA+CGG + Chr4:65374720-65374739 MsG0480021869.01.T01:intron 35.0%
TTATAACCCTGAGATCTCTT+TGG + Chr4:65377735-65377754 MsG0480021869.01.T01:intron 35.0%
! AAACGTTTGCTGAAACAATG+TGG - Chr4:65377220-65377239 None:intergenic 35.0%
! AACGAGTTTTCCAATACCAA+TGG - Chr4:65378412-65378431 None:intergenic 35.0%
! CAACCACATTTTCTACACTT+TGG - Chr4:65376774-65376793 None:intergenic 35.0%
! CACACTATTTAGAGTTCGTA+TGG + Chr4:65375914-65375933 MsG0480021869.01.T01:CDS 35.0%
! GCGGTTTTCATTATCAATCT+TGG - Chr4:65379644-65379663 None:intergenic 35.0%
! TACACAAACTATTTGGGATG+TGG - Chr4:65375195-65375214 None:intergenic 35.0%
!! GTTTAAGGTTGATGTTTACC+TGG - Chr4:65375413-65375432 None:intergenic 35.0%
!! TGGTGTTATGTGTCAAGTTT+AGG + Chr4:65375097-65375116 MsG0480021869.01.T01:intron 35.0%
!!! ATCCATTCCCATCTTGTTTT+TGG - Chr4:65377430-65377449 None:intergenic 35.0%
!!! GTTTGACTTGGAGCAATTTT+AGG - Chr4:65377379-65377398 None:intergenic 35.0%
!!! GTTTTGATTGGAGTTTGAAC+AGG + Chr4:65379583-65379602 MsG0480021869.01.T01:intron 35.0%
AAAACATTGAGTGCAGGAAC+AGG + Chr4:65374597-65374616 MsG0480021869.01.T01:CDS 40.0%
AAAGAAGCAGAGGTAGTTGA+AGG + Chr4:65379667-65379686 MsG0480021869.01.T01:CDS 40.0%
AAAGAGGTAGAGGTAGTTGA+AGG + Chr4:65375870-65375889 MsG0480021869.01.T01:CDS 40.0%
AAAGCACATCAAAGAGGTAG+AGG + Chr4:65375860-65375879 MsG0480021869.01.T01:CDS 40.0%
AAAGGGAAAACATTGAGTGC+AGG + Chr4:65374591-65374610 MsG0480021869.01.T01:CDS 40.0%
AAGAACATGTTGTGGACCAA+TGG + Chr4:65377613-65377632 MsG0480021869.01.T01:intron 40.0%
AATCCGGTGCAATCTTTGAA+CGG + Chr4:65377157-65377176 MsG0480021869.01.T01:intron 40.0%
AATGAAGCATGGGATCTCTT+TGG + Chr4:65378384-65378403 MsG0480021869.01.T01:CDS 40.0%
AATGTTAGCCAATGGCTCAA+TGG - Chr4:65379830-65379849 None:intergenic 40.0%
ACTTGTTTCCATCCAGCAAT+TGG + Chr4:65376022-65376041 MsG0480021869.01.T01:CDS 40.0%
AGAGTATGAAGTCAAGGAAG+AGG + Chr4:65375983-65376002 MsG0480021869.01.T01:CDS 40.0%
AGCTAATTGAAGGAGATGGA+GGG + Chr4:65375357-65375376 MsG0480021869.01.T01:CDS 40.0%
AGGACTATGTAATCTACGGT+TGG + Chr4:65374724-65374743 MsG0480021869.01.T01:intron 40.0%
AGTTGAGCAATTATCTTGGC+CGG - Chr4:65377761-65377780 None:intergenic 40.0%
ATTGGTCCACAACATGTTCT+TGG - Chr4:65377614-65377633 None:intergenic 40.0%
CAATCTTTGAACGGCAAGTT+GGG + Chr4:65377166-65377185 MsG0480021869.01.T01:intron 40.0%
CATGCTGAAAAAACACGTGT+TGG - Chr4:65377305-65377324 None:intergenic 40.0%
CATTTGATATGCAGGGTGAA+CGG - Chr4:65375443-65375462 None:intergenic 40.0%
CCTAAACTAAACGGTCTCAT+TGG + Chr4:65378179-65378198 MsG0480021869.01.T01:intron 40.0%
CGTATGGAAGTGATAGAGAA+AGG + Chr4:65375930-65375949 MsG0480021869.01.T01:CDS 40.0%
GAGCCAAAGTGTAGAAAATG+TGG + Chr4:65376768-65376787 MsG0480021869.01.T01:intron 40.0%
GATGCCTGAAAGATTTCAGA+AGG + Chr4:65375331-65375350 MsG0480021869.01.T01:CDS 40.0%
GATGCCTGAATTGTTTCAGA+AGG + Chr4:65378440-65378459 MsG0480021869.01.T01:CDS 40.0%
GGGAAAGAGAAATTGCACAA+AGG - Chr4:65376475-65376494 None:intergenic 40.0%
GGTGAGACTCATGAGAATAA+AGG + Chr4:65374573-65374592 MsG0480021869.01.T01:CDS 40.0%
GTCAACCTAGTTAGAATCAC+CGG - Chr4:65379403-65379422 None:intergenic 40.0%
GTGACATTATCAGTACATGG+AGG + Chr4:65374623-65374642 MsG0480021869.01.T01:intron 40.0%
GTGACGTTTAGCATACACAA+AGG - Chr4:65374791-65374810 None:intergenic 40.0%
TCGGTTATCCTAGAATCACT+TGG - Chr4:65376298-65376317 None:intergenic 40.0%
TGAGGTTTATAAGTGGATGG+AGG - Chr4:65376823-65376842 None:intergenic 40.0%
TGATACCGGTGATTCTAACT+AGG + Chr4:65379395-65379414 MsG0480021869.01.T01:intron 40.0%
TGGCTCAATGGAAACAAATG+AGG - Chr4:65379818-65379837 None:intergenic 40.0%
TTGGCAGACATTGTAGAAGT+TGG + Chr4:65376041-65376060 MsG0480021869.01.T01:CDS 40.0%
! CAGCTTCTAGTTACAAGTTG+TGG - Chr4:65379200-65379219 None:intergenic 40.0%
! CCAATGAGACCGTTTAGTTT+AGG - Chr4:65378182-65378201 None:intergenic 40.0%
! GCTCAACTAGCTTATATGGA+AGG + Chr4:65377773-65377792 MsG0480021869.01.T01:intron 40.0%
! TATTTGGGATGTGGTGTATG+TGG - Chr4:65375186-65375205 None:intergenic 40.0%
! TGAGCCATTGGCTAACATTA+TGG + Chr4:65379831-65379850 MsG0480021869.01.T01:CDS 40.0%
! TGGTATTGGAAAACTCGTTG+AGG + Chr4:65378413-65378432 MsG0480021869.01.T01:CDS 40.0%
!! ACTTTGGCTCTTTGATTGGT+GGG - Chr4:65376758-65376777 None:intergenic 40.0%
!! ATTTTGGAGGCTCAAAACTG+AGG - Chr4:65379052-65379071 None:intergenic 40.0%
!! CTACACTTTGGCTCTTTGAT+TGG - Chr4:65376762-65376781 None:intergenic 40.0%
!! TAGCTGTAATTTGGTGCTTG+TGG - Chr4:65376701-65376720 None:intergenic 40.0%
!! TCCACCTTCTGAAACAATTC+AGG - Chr4:65378447-65378466 None:intergenic 40.0%
!! TCCACCTTCTGAAATCTTTC+AGG - Chr4:65375338-65375357 None:intergenic 40.0%
!! TGTTGGTTTCTGAAGTCAGT+CGG - Chr4:65377288-65377307 None:intergenic 40.0%
!! TTGCAGCCTTGTTTCTGTTA+AGG - Chr4:65379873-65379892 None:intergenic 40.0%
!! TTGCATCCTTGTTTCTGTTG+AGG - Chr4:65376076-65376095 None:intergenic 40.0%
!!! GTTTTGGTTGGAGTTTGATC+AGG + Chr4:65375786-65375805 MsG0480021869.01.T01:intron 40.0%
AAACCGCATCAAAGAAGCAG+AGG + Chr4:65379657-65379676 MsG0480021869.01.T01:CDS 45.0%
AATGAGAGAGATCCTGAGAC+CGG - Chr4:65377530-65377549 None:intergenic 45.0%
AATGTCTGCCAATTGCTGGA+TGG - Chr4:65376033-65376052 None:intergenic 45.0%
ACAAGTATGTGGTTGAGGGA+AGG - Chr4:65377507-65377526 None:intergenic 45.0%
AGAGAACCGACATTGAAGGA+GGG + Chr4:65374541-65374560 MsG0480021869.01.T01:CDS 45.0%
AGATCCCATGCTTCATTTGC+TGG - Chr4:65378381-65378400 None:intergenic 45.0%
AGCAAACGTTTCCTACTGCT+TGG + Chr4:65377229-65377248 MsG0480021869.01.T01:intron 45.0%
AGTGAAGCATGGGATCTCTT+TGG + Chr4:65375275-65375294 MsG0480021869.01.T01:CDS 45.0%
ATGTGCCAGCAAATGAAGCA+TGG + Chr4:65378373-65378392 MsG0480021869.01.T01:CDS 45.0%
ATTCTCACATGTAGGCTGCT+TGG - Chr4:65377690-65377709 None:intergenic 45.0%
ATTGAAGGAGGGAGACAAAC+AGG + Chr4:65374552-65374571 MsG0480021869.01.T01:CDS 45.0%
ATTGGAAAACTCGTTGAGGC+AGG + Chr4:65378417-65378436 MsG0480021869.01.T01:CDS 45.0%
CAGAAGGTGGAGCTAATTGA+AGG + Chr4:65375347-65375366 MsG0480021869.01.T01:CDS 45.0%
CTACAATGTCTGCCAATTGC+TGG - Chr4:65376037-65376056 None:intergenic 45.0%
CTACCTCTGCTTCTTTGATG+CGG - Chr4:65379663-65379682 None:intergenic 45.0%
CTAGACGTAGCTATCAAGTG+TGG + Chr4:65376434-65376453 MsG0480021869.01.T01:intron 45.0%
CTATGTACAAGTGGGGGATT+CGG + Chr4:65375626-65375645 MsG0480021869.01.T01:intron 45.0%
CTCAAACTCACATTCACTCC+AGG + Chr4:65375392-65375411 MsG0480021869.01.T01:CDS 45.0%
CTCTTTGGCACCATTGGTAT+TGG + Chr4:65378399-65378418 MsG0480021869.01.T01:CDS 45.0%
GAAGGTGGATGCTTAGATCT+TGG + Chr4:65375888-65375907 MsG0480021869.01.T01:CDS 45.0%
GAGACCTAGGTTCGATACTT+TGG - Chr4:65376251-65376270 None:intergenic 45.0%
GAGCTAATTGAAGGAGATGG+AGG + Chr4:65375356-65375375 MsG0480021869.01.T01:CDS 45.0%
GCAAACGTTTCCTACTGCTT+GGG + Chr4:65377230-65377249 MsG0480021869.01.T01:intron 45.0%
GCAATCTTTGAACGGCAAGT+TGG + Chr4:65377165-65377184 MsG0480021869.01.T01:intron 45.0%
GCAGCCTACATGTGAGAATT+TGG + Chr4:65377691-65377710 MsG0480021869.01.T01:intron 45.0%
GCCTGAAAGATTTCAGAAGG+TGG + Chr4:65375334-65375353 MsG0480021869.01.T01:CDS 45.0%
GCCTGAATTGTTTCAGAAGG+TGG + Chr4:65378443-65378462 MsG0480021869.01.T01:CDS 45.0%
GCTAATTGAAGGAGATGGAG+GGG + Chr4:65375358-65375377 MsG0480021869.01.T01:CDS 45.0%
GGAGTTTGATCAGGTTTACC+TGG + Chr4:65375795-65375814 MsG0480021869.01.T01:intron 45.0%
GTAACGCCCAAGATTGATGA+GGG - Chr4:65377588-65377607 None:intergenic 45.0%
GTCTCATTGGACTCAACGTA+AGG + Chr4:65378192-65378211 MsG0480021869.01.T01:intron 45.0%
GTGAACGGAGGATGTGTTTA+AGG - Chr4:65375428-65375447 None:intergenic 45.0%
GTGGAGCTAATTGAAGGAGA+TGG + Chr4:65375353-65375372 MsG0480021869.01.T01:CDS 45.0%
TAAGTGGATGGAGGTAAGAG+TGG - Chr4:65376814-65376833 None:intergenic 45.0%
TACAGGCCAAGAACATGTTG+TGG + Chr4:65377605-65377624 MsG0480021869.01.T01:intron 45.0%
TAGGCTGCTTGGGTGAAATT+GGG - Chr4:65377679-65377698 None:intergenic 45.0%
TCATCAATCTTGGGCGTTAC+AGG + Chr4:65377588-65377607 MsG0480021869.01.T01:intron 45.0%
TGCTATTGGAAAGGTCGTTG+AGG + Chr4:65375304-65375323 MsG0480021869.01.T01:CDS 45.0%
TGTAACGCCCAAGATTGATG+AGG - Chr4:65377589-65377608 None:intergenic 45.0%
TGTGCCAGCAAATGAAGCAT+GGG + Chr4:65378374-65378393 MsG0480021869.01.T01:CDS 45.0%
TTAAACGGCAAAACGCAGAG+CGG + Chr4:65377993-65378012 MsG0480021869.01.T01:intron 45.0%
TTCTCACATGTAGGCTGCTT+GGG - Chr4:65377689-65377708 None:intergenic 45.0%
TTCTCACTCGTACGCTTTCA+GGG + Chr4:65377330-65377349 MsG0480021869.01.T01:intron 45.0%
TTCTTCAACCTTGGAGACCT+AGG - Chr4:65376264-65376283 None:intergenic 45.0%
TTGCCGTTCAAAGATTGCAC+CGG - Chr4:65377163-65377182 None:intergenic 45.0%
TTGCTGGATGGAAACAAGTG+CGG - Chr4:65376021-65376040 None:intergenic 45.0%
TTGGAAAACTCGTTGAGGCA+GGG + Chr4:65378418-65378437 MsG0480021869.01.T01:CDS 45.0%
TTGTCTCCCTCCTTCAATGT+CGG - Chr4:65374550-65374569 None:intergenic 45.0%
TTTCAGGGACACTTCTCAGA+AGG + Chr4:65377345-65377364 MsG0480021869.01.T01:intron 45.0%
TTTCTATCCATCACCGGTGA+CGG - Chr4:65374666-65374685 None:intergenic 45.0%
! ATGCTTCATTTGCTGGCACA+TGG - Chr4:65378374-65378393 None:intergenic 45.0%
! CTCTTTGGCACTCTTGCTAT+TGG + Chr4:65375290-65375309 MsG0480021869.01.T01:CDS 45.0%
! TCTTTTAAACCAGTTGGGCC+AGG - Chr4:65375816-65375835 None:intergenic 45.0%
!! CACTTTGGCTCTTTGATTGG+TGG - Chr4:65376759-65376778 None:intergenic 45.0%
!! TGGCACTCTTGCTATTGGAA+AGG + Chr4:65375295-65375314 MsG0480021869.01.T01:CDS 45.0%
!! TGTGCCAAAGTATCGAACCT+AGG + Chr4:65376244-65376263 MsG0480021869.01.T01:intron 45.0%
!! AAATAAAGTATATTAATAAA+AGG + Chr4:65379453-65379472 MsG0480021869.01.T01:intron 5.0%
!! AATAAAGTATATTAATAAAA+GGG + Chr4:65379454-65379473 MsG0480021869.01.T01:intron 5.0%
!!! TTTATTAATATACTTTATTT+GGG - Chr4:65379453-65379472 None:intergenic 5.0%
!!! TTTTATTAATATACTTTATT+TGG - Chr4:65379454-65379473 None:intergenic 5.0%
AACCCTGAGATCTCTTTGGC+CGG + Chr4:65377739-65377758 MsG0480021869.01.T01:intron 50.0%
ACCGGACAAGTATGTGGTTG+AGG - Chr4:65377512-65377531 None:intergenic 50.0%
AGATCCCATGCTTCACTTGC+TGG - Chr4:65375272-65375291 None:intergenic 50.0%
ATGTGCCAGCAAGTGAAGCA+TGG + Chr4:65375264-65375283 MsG0480021869.01.T01:CDS 50.0%
ATGTGTGATGTGCTCTCGTG+AGG - Chr4:65376976-65376995 None:intergenic 50.0%
ATTGAAGGAGATGGAGGGGT+TGG + Chr4:65375362-65375381 MsG0480021869.01.T01:CDS 50.0%
CACCGGTATCAACCTAATCG+AGG - Chr4:65379386-65379405 None:intergenic 50.0%
CATTGAGTGCAGGAACAGGA+AGG + Chr4:65374601-65374620 MsG0480021869.01.T01:CDS 50.0%
CCCTCAACCACATACTTGTC+CGG + Chr4:65377508-65377527 MsG0480021869.01.T01:intron 50.0%
CCGGACAAGTATGTGGTTGA+GGG - Chr4:65377511-65377530 None:intergenic 50.0%
GAAGCAGAGGTAGTTGAAGG+TGG + Chr4:65379670-65379689 MsG0480021869.01.T01:CDS 50.0%
GAGAGAACCGACATTGAAGG+AGG + Chr4:65374540-65374559 MsG0480021869.01.T01:CDS 50.0%
GAGGTAGAGGTAGTTGAAGG+TGG + Chr4:65375873-65375892 MsG0480021869.01.T01:CDS 50.0%
GCGTAGAGCTATCAAAAGGG+TGG + Chr4:65379360-65379379 MsG0480021869.01.T01:intron 50.0%
GGAGTTTGAACAGGTACACC+TGG + Chr4:65379592-65379611 MsG0480021869.01.T01:intron 50.0%
GGTGAGAGAACCGACATTGA+AGG + Chr4:65374537-65374556 MsG0480021869.01.T01:CDS 50.0%
GTAGGCTGCTTGGGTGAAAT+TGG - Chr4:65377680-65377699 None:intergenic 50.0%
GTATCGAACCTAGGTCTCCA+AGG + Chr4:65376253-65376272 MsG0480021869.01.T01:intron 50.0%
GTTCTCACTCGTACGCTTTC+AGG + Chr4:65377329-65377348 MsG0480021869.01.T01:intron 50.0%
TCAAAAGGGTGGCCTCGATT+AGG + Chr4:65379371-65379390 MsG0480021869.01.T01:intron 50.0%
TGGGATCTCTTTGGCACCAT+TGG + Chr4:65378393-65378412 MsG0480021869.01.T01:CDS 50.0%
TGTGCCAGCAAGTGAAGCAT+GGG + Chr4:65375265-65375284 MsG0480021869.01.T01:CDS 50.0%
TGTTACAAGGCCCAAGCAGT+AGG - Chr4:65377243-65377262 None:intergenic 50.0%
TTGAAGGAGATGGAGGGGTT+GGG + Chr4:65375363-65375382 MsG0480021869.01.T01:CDS 50.0%
TTGATATGCAGGGTGAACGG+AGG - Chr4:65375440-65375459 None:intergenic 50.0%
!! GGCCTCGATTAGGTTGATAC+CGG + Chr4:65379381-65379400 MsG0480021869.01.T01:intron 50.0%
ACGCCCAAGATTGATGAGGG+CGG - Chr4:65377585-65377604 None:intergenic 55.0%
AGCCCGCCCTCATCAATCTT+GGG + Chr4:65377579-65377598 MsG0480021869.01.T01:intron 55.0%
ATAGAGAGCGATGCCGTCAC+CGG + Chr4:65374650-65374669 MsG0480021869.01.T01:intron 55.0%
CCACATACTTGTCCGGTCTC+AGG + Chr4:65377515-65377534 MsG0480021869.01.T01:intron 55.0%
CCTGAGACCGGACAAGTATG+TGG - Chr4:65377518-65377537 None:intergenic 55.0%
CTAGACTGACGTCGTCGCAA+AGG - Chr4:65377026-65377045 None:intergenic 55.0%
GATGTGGTGTATGTGGTGCG+GGG - Chr4:65375179-65375198 None:intergenic 55.0%
GCGACGACGTCAGTCTAGTT+TGG + Chr4:65377028-65377047 MsG0480021869.01.T01:intron 55.0%
GGATGTGGTGTATGTGGTGC+GGG - Chr4:65375180-65375199 None:intergenic 55.0%
GGGATGTGGTGTATGTGGTG+CGG - Chr4:65375181-65375200 None:intergenic 55.0%
TCAGGTTTACCTGGCCCAAC+TGG + Chr4:65375804-65375823 MsG0480021869.01.T01:intron 55.0%
TCTTTGTAACCAGCTGGGCC+AGG - Chr4:65379613-65379632 None:intergenic 55.0%
CAAGATTGATGAGGGCGGGC+TGG - Chr4:65377580-65377599 None:intergenic 60.0%
CAGCCCGCCCTCATCAATCT+TGG + Chr4:65377578-65377597 MsG0480021869.01.T01:intron 60.0%
CGCCCAAGATTGATGAGGGC+GGG - Chr4:65377584-65377603 None:intergenic 60.0%
GGCCGGCCAAAGAGATCTCA+GGG - Chr4:65377744-65377763 None:intergenic 60.0%
TGGCCGGCCAAAGAGATCTC+AGG - Chr4:65377745-65377764 None:intergenic 60.0%
ACAGGTACACCTGGCCCAGC+TGG + Chr4:65379601-65379620 MsG0480021869.01.T01:intron 65.0%
AGCGATGCCGTCACCGGTGA+TGG + Chr4:65374656-65374675 MsG0480021869.01.T01:intron 65.0%
!! TGAGGGCGGGCTGGTGCAGA+AGG - Chr4:65377571-65377590 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr4 gene 65374531 65380075 65374531 ID=MsG0480021869.01;Name=MsG0480021869.01
Chr4 mRNA 65374531 65380075 65374531 ID=MsG0480021869.01.T01;Parent=MsG0480021869.01;Name=MsG0480021869.01.T01;_AED=0.41;_eAED=0.41;_QI=0|0.5|0.2|0.8|0.75|0.6|5|169|409
Chr4 exon 65374531 65374622 65374531 ID=MsG0480021869.01.T01:exon:7221;Parent=MsG0480021869.01.T01
Chr4 exon 65375124 65375413 65375124 ID=MsG0480021869.01.T01:exon:7222;Parent=MsG0480021869.01.T01
Chr4 exon 65375808 65376108 65375808 ID=MsG0480021869.01.T01:exon:7223;Parent=MsG0480021869.01.T01
Chr4 exon 65378278 65378522 65378278 ID=MsG0480021869.01.T01:exon:7224;Parent=MsG0480021869.01.T01
Chr4 exon 65379605 65380075 65379605 ID=MsG0480021869.01.T01:exon:7225;Parent=MsG0480021869.01.T01
Chr4 CDS 65374531 65374622 65374531 ID=MsG0480021869.01.T01:cds;Parent=MsG0480021869.01.T01
Chr4 CDS 65375124 65375413 65375124 ID=MsG0480021869.01.T01:cds;Parent=MsG0480021869.01.T01
Chr4 CDS 65375808 65376108 65375808 ID=MsG0480021869.01.T01:cds;Parent=MsG0480021869.01.T01
Chr4 CDS 65378278 65378522 65378278 ID=MsG0480021869.01.T01:cds;Parent=MsG0480021869.01.T01
Chr4 CDS 65379605 65379906 65379605 ID=MsG0480021869.01.T01:cds;Parent=MsG0480021869.01.T01
Chr4 three_prime_UTR 65379907 65380075 65379907 ID=MsG0480021869.01.T01:three_prime_utr;Parent=MsG0480021869.01.T01
Gene Sequence

>MsG0480021869.01.T01

AAAAGGGGTGAGAGAACCGACATTGAAGGAGGGAGACAAACAGGTGAGACTCATGAGAATAAAGGGAAAACATTGAGTGCAGGAACAGGAAGTTGCGTATACTTCACATCAAAATTGTGGACGATTGCATCAACAGTTGAATTTCCCCGCACCACATACACCACATCCCAAATAGTTTGTGTAAAAGAGATTAAGAAGATGTTTGGTCAACTTGAGCATGAGTTAGAGCTGCATGTGCCAGCAAGTGAAGCATGGGATCTCTTTGGCACTCTTGCTATTGGAAAGGTCGTTGAGGAAGAGATGCCTGAAAGATTTCAGAAGGTGGAGCTAATTGAAGGAGATGGAGGGGTTGGGACTATTCTCAAACTCACATTCACTCCAGGTTTACCTGGCCCAACTGGTTTAAAAGAAAAGTTCACAAAGATTGATAATGAAAAGCACATCAAAGAGGTAGAGGTAGTTGAAGGTGGATGCTTAGATCTTGGATTCACACTATTTAGAGTTCGTATGGAAGTGATAGAGAAAGGTAAAGATTCAAGCATAATCAAAACTACATTAGAGTATGAAGTCAAGGAAGAGGAAGCAGCTAATGCCGCACTTGTTTCCATCCAGCAATTGGCAGACATTGTAGAAGTTGGCAAAAATTACCTCAACAGAAACAAGGATGCAAAAGAAGTAAAGTACAATAGCATAGTCCACATTTTAAAACTCAAAAGAGTAAATATTTTGTGGAAAAGAAAGAAGATGTCTGGTCAACTTGAGCATGAGTTAGAGCTCCATGTGCCAGCAAATGAAGCATGGGATCTCTTTGGCACCATTGGTATTGGAAAACTCGTTGAGGCAGGGATGCCTGAATTGTTTCAGAAGGTGGAGCTAATTGAAGGAGATGGAGGGGTTGGAACTATTCTCAAACTCACATTCACTCCAGGTACACCTGGCCCAGCTGGTTACAAAGAGAAATTCACCAAGATTGATAATGAAAACCGCATCAAAGAAGCAGAGGTAGTTGAAGGTGGATACTTAGAATTTGGATTCACACTATTTAGAGTTCGTTTTGAAATAATAGAGAAAGGTGAAGATTCAAGCATAATCAAAACTACAATAGAGTATGAAATCAAAGAAGAGCATGCAGCCAATGCCTCATTTGTTTCCATTGAGCCATTGGCTAACATTATGGAAGTTGCCAAGACTTACCTTAACAGAAACAAGGCTGCAAAAGAAGCAAAGTAG

Protein sequence

>MsG0480021869.01.T01

KRGERTDIEGGRQTGETHENKGKTLSAGTGSCVYFTSKLWTIASTVEFPRTTYTTSQIVCVKEIKKMFGQLEHELELHVPASEAWDLFGTLAIGKVVEEEMPERFQKVELIEGDGGVGTILKLTFTPGLPGPTGLKEKFTKIDNEKHIKEVEVVEGGCLDLGFTLFRVRMEVIEKGKDSSIIKTTLEYEVKEEEAANAALVSIQQLADIVEVGKNYLNRNKDAKEVKYNSIVHILKLKRVNILWKRKKMSGQLEHELELHVPANEAWDLFGTIGIGKLVEAGMPELFQKVELIEGDGGVGTILKLTFTPGTPGPAGYKEKFTKIDNENRIKEAEVVEGGYLEFGFTLFRVRFEIIEKGEDSSIIKTTIEYEIKEEHAANASFVSIEPLANIMEVAKTYLNRNKAAKEAK*