AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480023673.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480023673.01.T01 MTR_8g099320 94.541 403 3 1 1 403 70 453 0.0 761
MsG0480023673.01.T01 MTR_4g055610 46.465 396 192 2 2 397 84 459 2.73e-124 367
MsG0480023673.01.T01 MTR_1g492640 43.500 400 204 4 2 400 103 481 2.15e-109 330
MsG0480023673.01.T01 MTR_1g492640 44.638 345 188 3 57 400 7 349 4.50e-98 296
MsG0480023673.01.T01 MTR_1g492640 42.756 283 140 4 2 283 85 346 3.09e-70 225
MsG0480023673.01.T01 MTR_1g492640 42.756 283 140 4 2 283 103 364 5.88e-70 225
MsG0480023673.01.T01 MTR_4g033275 97.826 92 2 0 275 366 7 98 8.61e-60 189
MsG0480023673.01.T01 MTR_1g070470 31.000 400 241 5 3 397 68 437 2.41e-58 197
MsG0480023673.01.T01 MTR_4g055637 46.535 202 100 3 196 397 182 375 1.34e-55 188
MsG0480023673.01.T01 MTR_3g069960 28.238 386 232 11 20 397 32 380 8.22e-39 143
MsG0480023673.01.T01 MTR_3g069960 28.238 386 232 11 20 397 85 433 2.09e-38 143
MsG0480023673.01.T01 MTR_6g022790 26.303 403 256 10 3 398 87 455 6.45e-38 142
MsG0480023673.01.T01 MTR_5g081630 28.272 382 237 9 20 397 32 380 8.92e-37 138
MsG0480023673.01.T01 MTR_2g101920 26.010 396 255 8 9 397 96 460 4.60e-35 135
MsG0480023673.01.T01 MTR_4g104510 27.250 400 251 12 1 397 83 445 1.95e-34 133
MsG0480023673.01.T01 MTR_4g104510 27.114 402 251 12 1 397 83 447 3.62e-34 132
MsG0480023673.01.T01 MTR_6g022780 26.952 397 252 8 9 398 63 428 6.30e-31 123
MsG0480023673.01.T01 MTR_7g038910 26.448 397 253 9 9 398 79 443 2.41e-30 121
MsG0480023673.01.T01 MTR_6g023075 26.196 397 255 8 9 398 63 428 1.39e-29 119
MsG0480023673.01.T01 MTR_2g096830 26.196 397 255 8 9 398 63 428 1.42e-28 116
MsG0480023673.01.T01 MTR_8g080120 23.691 401 259 9 9 398 72 436 2.53e-27 112
MsG0480023673.01.T01 MTR_6g023065 25.441 397 257 10 9 398 99 463 7.26e-27 112
MsG0480023673.01.T01 MTR_1g492640 40.127 157 73 3 2 157 85 221 1.79e-26 107
MsG0480023673.01.T01 MTR_1g492640 40.127 157 73 3 2 157 103 239 2.39e-26 107
MsG0480023673.01.T01 MTR_4g103890 25.000 388 246 9 18 395 68 420 1.17e-25 108
MsG0480023673.01.T01 MTR_7g038910 26.415 318 195 9 9 319 79 364 1.98e-25 107
MsG0480023673.01.T01 MTR_3g115090 24.538 379 243 11 5 368 129 479 6.97e-25 106
MsG0480023673.01.T01 MTR_3g096800 29.904 311 187 11 112 400 175 476 1.21e-24 105
MsG0480023673.01.T01 MTR_7g038910 26.367 311 190 9 9 312 79 357 2.32e-24 103
MsG0480023673.01.T01 MTR_1g105980 28.308 325 195 11 104 400 156 470 2.87e-24 104
MsG0480023673.01.T01 MTR_1g106000 26.807 332 200 10 104 400 149 472 9.82e-24 103
MsG0480023673.01.T01 MTR_3g005740 24.757 412 255 13 3 398 97 469 1.42e-23 102
MsG0480023673.01.T01 MTR_1g093020 27.606 355 211 10 63 397 108 436 2.20e-23 101
MsG0480023673.01.T01 MTR_5g054730 27.684 354 212 11 63 397 110 438 7.06e-23 100
MsG0480023673.01.T01 MTR_3g088455 30.421 309 185 10 113 399 177 477 1.04e-22 100
MsG0480023673.01.T01 MTR_1g093020 28.797 316 193 8 63 365 108 404 1.94e-22 98.6
MsG0480023673.01.T01 MTR_3g069960 28.063 253 146 7 20 268 85 305 2.40e-22 97.4
MsG0480023673.01.T01 MTR_1g105995 27.554 323 196 13 104 398 155 467 5.30e-22 97.8
MsG0480023673.01.T01 MTR_3g088475 29.355 310 188 10 113 399 177 478 2.66e-21 95.9
MsG0480023673.01.T01 MTR_3g096830 26.854 391 234 16 3 368 71 434 4.24e-21 95.1
MsG0480023673.01.T01 MTR_1g105990 27.517 298 178 11 104 372 155 443 6.18e-21 94.7
MsG0480023673.01.T01 MTR_2g096830 25.080 311 195 8 9 312 63 342 1.29e-20 92.4
MsG0480023673.01.T01 MTR_1g093030 26.781 351 219 10 63 397 108 436 2.02e-20 93.2
MsG0480023673.01.T01 MTR_1g029750 28.014 282 175 8 112 371 177 452 5.61e-20 92.0
MsG0480023673.01.T01 MTR_3g085820 25.309 324 201 10 3 319 78 367 8.60e-20 90.9
MsG0480023673.01.T01 MTR_3g110660 25.938 320 205 11 106 400 169 481 1.56e-19 90.5
MsG0480023673.01.T01 MTR_3g096840 27.869 305 195 10 112 397 181 479 3.82e-19 89.4
MsG0480023673.01.T01 MTR_2g012470 25.366 410 251 15 9 398 144 518 1.60e-18 87.8
MsG0480023673.01.T01 MTR_1g007240 26.129 310 197 10 112 398 154 454 9.43e-18 85.1
MsG0480023673.01.T01 MTR_0531s0020 26.592 267 162 6 9 269 98 336 1.44e-17 84.0
MsG0480023673.01.T01 MTR_5g023260 23.158 380 235 13 7 365 156 499 1.58e-17 84.7
MsG0480023673.01.T01 MTR_8g094290 24.311 399 264 13 21 400 95 474 2.54e-17 84.0
MsG0480023673.01.T01 MTR_1g007380 25.545 321 205 10 106 400 159 471 3.73e-17 83.6
MsG0480023673.01.T01 MTR_5g023240 26.688 311 199 11 105 400 216 512 7.28e-17 82.8
MsG0480023673.01.T01 MTR_4g073520 25.466 322 196 11 112 400 201 511 2.07e-16 81.3
MsG0480023673.01.T01 MTR_4g075750 23.724 392 266 11 18 395 128 500 2.10e-16 81.3
MsG0480023673.01.T01 MTR_4g073520 25.466 322 196 11 112 400 201 511 2.64e-16 80.9
MsG0480023673.01.T01 MTR_5g096840 28.179 291 168 11 102 364 160 437 2.17e-15 78.2
MsG0480023673.01.T01 MTR_1g007180 24.272 309 202 9 112 397 154 453 1.26e-14 75.5
MsG0480023673.01.T01 MTR_1g007180 24.510 306 199 9 115 397 73 369 1.91e-14 74.7
MsG0480023673.01.T01 MTR_1g007270 26.316 266 176 6 112 362 174 434 3.17e-14 74.3
MsG0480023673.01.T01 MTR_3g461430 25.746 268 175 7 106 354 166 428 2.96e-13 71.6
MsG0480023673.01.T01 MTR_3g110420 23.779 307 208 6 112 397 166 467 7.99e-12 67.0
MsG0480023673.01.T01 MTR_3g110430 27.239 268 165 5 117 362 208 467 1.73e-11 66.2
MsG0480023673.01.T01 MTR_2g031750 24.038 312 197 11 113 397 155 453 2.88e-11 65.5
MsG0480023673.01.T01 MTR_2g031750 24.038 312 197 11 113 397 88 386 3.75e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480023673.01.T01 AT5G41800 77.171 403 73 1 1 403 69 452 0.0 630
MsG0480023673.01.T01 AT1G08230 42.025 395 209 2 4 397 73 448 2.18e-108 326
MsG0480023673.01.T01 AT1G08230 43.953 339 189 1 60 397 10 348 2.50e-100 302
MsG0480023673.01.T01 AT1G08230 43.902 328 183 1 71 397 2 329 2.61e-98 296
MsG0480023673.01.T01 AT1G08230 43.902 328 183 1 71 397 2 329 2.61e-98 296
MsG0480023673.01.T01 AT1G08230 43.902 328 183 1 71 397 2 329 2.61e-98 296
MsG0480023673.01.T01 AT2G39890 28.392 398 245 9 4 397 19 380 7.16e-39 144
MsG0480023673.01.T01 AT2G39890 28.392 398 245 9 4 397 78 439 1.11e-38 144
MsG0480023673.01.T01 AT2G39890 28.392 398 245 9 4 397 78 439 1.11e-38 144
MsG0480023673.01.T01 AT3G55740 27.638 398 248 9 4 397 19 380 1.19e-36 137
MsG0480023673.01.T01 AT3G55740 27.638 398 248 9 4 397 19 380 1.19e-36 137
MsG0480023673.01.T01 AT3G55740 27.638 398 248 9 4 397 75 436 1.96e-36 138
MsG0480023673.01.T01 AT2G36590 28.065 367 227 8 4 366 72 405 2.56e-35 135
MsG0480023673.01.T01 AT5G40780 25.500 400 253 10 9 398 34 398 1.76e-33 129
MsG0480023673.01.T01 AT5G40780 25.500 400 253 10 9 398 34 398 1.76e-33 129
MsG0480023673.01.T01 AT5G40780 25.500 400 253 10 9 398 82 446 2.11e-33 130
MsG0480023673.01.T01 AT1G48640 25.500 400 253 10 9 398 89 453 2.40e-29 119
MsG0480023673.01.T01 AT1G24400 26.119 402 248 12 9 398 77 441 2.49e-26 110
MsG0480023673.01.T01 AT1G67640 25.806 403 258 10 3 398 73 441 2.04e-24 104
MsG0480023673.01.T01 AT1G61270 24.194 372 239 11 3 365 78 415 1.51e-21 96.7
MsG0480023673.01.T01 AT1G25530 28.198 344 223 10 63 397 111 439 4.42e-21 95.1
MsG0480023673.01.T01 AT2G36590 27.444 266 160 6 4 268 72 305 6.37e-21 93.2
MsG0480023673.01.T01 AT1G71680 25.436 401 261 11 4 398 80 448 4.47e-20 92.0
MsG0480023673.01.T01 AT1G44100 24.654 434 263 17 4 400 73 479 2.32e-19 90.1
MsG0480023673.01.T01 AT1G10010 27.682 289 181 7 104 370 161 443 4.75e-19 89.4
MsG0480023673.01.T01 AT1G10010 27.682 289 181 7 104 370 162 444 4.86e-19 89.4
MsG0480023673.01.T01 AT5G49630 27.103 321 199 10 106 399 168 480 7.63e-19 88.6
MsG0480023673.01.T01 AT1G77380 27.338 278 175 8 112 368 171 442 3.70e-18 86.7
MsG0480023673.01.T01 AT5G09220 23.543 429 269 15 3 399 90 491 7.67e-17 82.8
MsG0480023673.01.T01 AT3G01760 22.404 366 244 8 9 365 80 414 1.20e-16 82.0
MsG0480023673.01.T01 AT1G58360 25.078 319 210 10 104 399 170 482 3.95e-16 80.5
MsG0480023673.01.T01 AT5G63850 21.963 428 275 15 4 399 64 464 6.42e-15 76.6
MsG0480023673.01.T01 AT1G47670 23.039 408 248 12 9 387 142 512 1.61e-14 75.5
MsG0480023673.01.T01 AT1G71680 25.397 315 197 11 4 312 80 362 7.17e-14 72.8
MsG0480023673.01.T01 AT5G23810 27.099 262 165 8 106 346 164 420 4.81e-13 70.9

Find 99 sgRNAs with CRISPR-Local

Find 223 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTACTCTGCTGCAGTTTC+TGG 0.055926 4:+88420629 MsG0480023673.01.T01:CDS
CAAAATCATCATTGACTTAT+TGG 0.111694 4:+88421286 MsG0480023673.01.T01:CDS
GTTTCTGGGTATTGGGTATT+TGG 0.176881 4:+88420644 MsG0480023673.01.T01:CDS
CACTATCAAACAGCTTAAAT+TGG 0.193422 4:-88421395 None:intergenic
CAATAAGTCAATGATGATTT+TGG 0.212437 4:-88421285 None:intergenic
TTTATCATCTTTCCAGTTGC+AGG 0.255166 4:-88420569 None:intergenic
CTGCTGCAGTTTCTGGGTAT+TGG 0.260317 4:+88420636 MsG0480023673.01.T01:CDS
TGTAGCCCAAGCTGAGAAAA+AGG 0.265214 4:-88420188 None:intergenic
TGCTGCAGTTTCTGGGTATT+GGG 0.278167 4:+88420637 MsG0480023673.01.T01:CDS
GCCAGATGATGGACCTTCTT+TGG 0.282256 4:+88420703 MsG0480023673.01.T01:CDS
TTGGCTCCAACTTGGGTCCT+TGG 0.286614 4:+88420722 MsG0480023673.01.T01:CDS
GCGAGGAAGAAGATTTCTTT+TGG 0.301221 4:-88421109 None:intergenic
TGCTGTTGGTTTCATTCCTC+TGG 0.308064 4:+88421218 MsG0480023673.01.T01:CDS
GCAACTGGAAAGATGATAAA+AGG 0.310014 4:+88420572 MsG0480023673.01.T01:CDS
TCAAGTTGCTTATGAGATAA+TGG 0.316818 4:+88421050 MsG0480023673.01.T01:CDS
ACCTTCTTTGGCTCCAACTT+GGG 0.338327 4:+88420715 MsG0480023673.01.T01:CDS
ATCAAGAACTAATTTCCTTA+TGG 0.340524 4:-88421367 None:intergenic
GGCTACACCTTCCTTGTAGT+TGG 0.342809 4:+88420204 MsG0480023673.01.T01:CDS
TGCTCCATGTGGTGCAATAT+TGG 0.345478 4:-88420067 None:intergenic
CGAGTTCTCGGAAACGGATA+TGG 0.345658 4:-88418238 None:intergenic
GAACTCGCCGCCGATGTCTT+AGG 0.352198 4:+88418254 MsG0480023673.01.T01:CDS
TCTACTCTGCTGCAGTTTCT+GGG 0.376927 4:+88420630 MsG0480023673.01.T01:CDS
GACCTTCTTTGGCTCCAACT+TGG 0.385739 4:+88420714 MsG0480023673.01.T01:CDS
CGCCGGTATTGATTGCCGTT+TGG 0.387244 4:-88418921 None:intergenic
AATTGCTGCAATTATGGAAA+TGG 0.392812 4:-88420412 None:intergenic
CATGAGGCAGTAAGAGTAGA+AGG 0.394794 4:-88418177 None:intergenic
GTAGGGGCAATCCTGCTTGC+TGG 0.394857 4:+88418949 MsG0480023673.01.T01:CDS
CTTCTTCAACTCTTCGCAAT+CGG 0.397741 4:+88420764 MsG0480023673.01.T01:CDS
TGTAAAGTGTTCGAAGAATC+AGG 0.407219 4:-88421131 None:intergenic
TATGTGTTATGCCGTAATTT+TGG 0.409726 4:+88420601 MsG0480023673.01.T01:CDS
TTGGATCAACATTTCAATCA+TGG 0.409998 4:+88421305 MsG0480023673.01.T01:CDS
ACTCTAGCACCTCCTGCAAC+TGG 0.420616 4:+88420557 MsG0480023673.01.T01:CDS
AGACATCGGCGGCGAGTTCT+CGG 0.429362 4:-88418250 None:intergenic
CATCAAACTCTTCAAAATGT+TGG 0.435510 4:-88420681 None:intergenic
TCAATCATGGTGGCATTCAC+TGG 0.438826 4:+88421318 MsG0480023673.01.T01:CDS
GTAGAATGTCACCAAAATTA+CGG 0.442251 4:-88420612 None:intergenic
AAAATGGTTACTTGTATCTC+AGG 0.442563 4:-88420453 None:intergenic
TGAGATAATGGAGAAGAAAT+CGG 0.444629 4:+88421062 MsG0480023673.01.T01:CDS
ATCCAAACGGCAATCAATAC+CGG 0.447790 4:+88418919 MsG0480023673.01.T01:CDS
ACTCTTCAAAATGTTGGAGT+TGG 0.450754 4:-88420675 None:intergenic
AAGACCCTTGAGGATTCCTT+AGG 0.451852 4:-88420375 None:intergenic
GCCAAAGAAGGTCCATCATC+TGG 0.458042 4:-88420704 None:intergenic
TCAATACCGGCGTTGGCGTA+GGG 0.464596 4:+88418932 MsG0480023673.01.T01:CDS
TCAACTCTTCGCAATCGGTC+TGG 0.469711 4:+88420769 MsG0480023673.01.T01:CDS
GGACTATTCCTTGGAACCTA+AGG 0.470002 4:+88420359 MsG0480023673.01.T01:CDS
ATTCACTGGTGCAGGAATCA+TGG 0.473389 4:+88421332 MsG0480023673.01.T01:CDS
TTACGGCATAACACATAGTA+AGG 0.482389 4:-88420595 None:intergenic
AAGAGTTTGATGCCAGATGA+TGG 0.482621 4:+88420692 MsG0480023673.01.T01:CDS
GCTTGCTGGTCAATGCCTCC+AGG 0.485762 4:+88418963 MsG0480023673.01.T01:CDS
CTTGATCATTGCGAAAATGC+CGG 0.487042 4:+88418209 MsG0480023673.01.T01:CDS
TGGGTGCATTCTCGTCCATA+AGG 0.489029 4:+88421352 MsG0480023673.01.T01:CDS
AATGGCGTGGTTGGTGCTGT+TGG 0.491300 4:+88421204 MsG0480023673.01.T01:CDS
AGTTGATGTGTCGTAGGGAA+TGG 0.492712 4:-88420158 None:intergenic
ATGGTGGCATTCACTGGTGC+AGG 0.497413 4:+88421324 MsG0480023673.01.T01:CDS
CCCTCCAAGGGACTATTCCT+TGG 0.507686 4:+88420350 MsG0480023673.01.T01:CDS
TGAGGATTCCTTAGGTTCCA+AGG 0.508139 4:-88420367 None:intergenic
ATCAATACCGGCGTTGGCGT+AGG 0.512369 4:+88418931 MsG0480023673.01.T01:CDS
CATTGATGACAGGGTCGGGT+TGG 0.517341 4:+88418875 MsG0480023673.01.T01:intron
GAAACGGATATGGCGGCGAC+CGG 0.520639 4:-88418228 None:intergenic
TTCACTGGTGCAGGAATCAT+GGG 0.520800 4:+88421333 MsG0480023673.01.T01:CDS
TGTTGTATAAAATCATAGGC+AGG 0.525971 4:-88421248 None:intergenic
GTGTCGTAGGGAATGGAAAG+TGG 0.532912 4:-88420151 None:intergenic
GGTTCCAAGGAATAGTCCCT+TGG 0.544138 4:-88420354 None:intergenic
TGTCGTAGGGAATGGAAAGT+GGG 0.547788 4:-88420150 None:intergenic
ACCCAAGTTGGAGCCAAAGA+AGG 0.550451 4:-88420716 None:intergenic
CGGCGGCGAGTTCTCGGAAA+CGG 0.551808 4:-88418244 None:intergenic
GCGAGTCCAAGGACCCAAGT+TGG 0.554753 4:-88420728 None:intergenic
GGAGACATCAATGGCGTGGT+TGG 0.554958 4:+88421195 MsG0480023673.01.T01:CDS
GTTGGTGCTTGTATTCATGC+AGG 0.557410 4:+88420222 MsG0480023673.01.T01:CDS
TCCAAGGAATAGTCCCTTGG+AGG 0.563185 4:-88420351 None:intergenic
ACGGCAATCAATACCGGCGT+TGG 0.565368 4:+88418925 MsG0480023673.01.T01:CDS
ATCATCTTTCCAGTTGCAGG+AGG 0.565721 4:-88420566 None:intergenic
GGAGGCATTGACCAGCAAGC+AGG 0.567407 4:-88418960 None:intergenic
CAAAGACGATAGCGAGTCCA+AGG 0.572437 4:-88420739 None:intergenic
GAATACAAGCACCAACTACA+AGG 0.578514 4:-88420215 None:intergenic
GCTGTTTGATAGTGAAGTTG+TGG 0.589328 4:+88421404 MsG0480023673.01.T01:CDS
CAATACCGGCGTTGGCGTAG+GGG 0.590022 4:+88418933 MsG0480023673.01.T01:CDS
GATTACATCACCTAAGACAT+CGG 0.591318 4:-88418264 None:intergenic
AATTATGGAAATGGCAGTGA+AGG 0.596045 4:-88420403 None:intergenic
CCAAGGAATAGTCCCTTGGA+GGG 0.596394 4:-88420350 None:intergenic
TACTCCAATATTGCACCACA+TGG 0.605379 4:+88420063 MsG0480023673.01.T01:CDS
AACACAAGTTGATGTGTCGT+AGG 0.607210 4:-88420164 None:intergenic
GATTGCCCCTACGCCAACGC+CGG 0.613136 4:-88418938 None:intergenic
AAATCGGCAGATGTGAAGCA+AGG 0.618331 4:+88421078 MsG0480023673.01.T01:CDS
ACACAAGTTGATGTGTCGTA+GGG 0.621227 4:-88420163 None:intergenic
ACTGTACGACTTCATAGCAA+TGG 0.624920 4:+88420095 MsG0480023673.01.T01:CDS
ACAAGCACCAACTACAAGGA+AGG 0.626871 4:-88420211 None:intergenic
TGGAACCTAAGGAATCCTCA+AGG 0.628374 4:+88420370 MsG0480023673.01.T01:CDS
GGAACCTAAGGAATCCTCAA+GGG 0.649619 4:+88420371 MsG0480023673.01.T01:CDS
AATCGGCAGATGTGAAGCAA+GGG 0.649745 4:+88421079 MsG0480023673.01.T01:CDS
GATCAACATTTCAATCATGG+TGG 0.650071 4:+88421308 MsG0480023673.01.T01:CDS
TACAGTTTCAATGCTCCATG+TGG 0.654464 4:-88420078 None:intergenic
CAAGGAATAGTCCCTTGGAG+GGG 0.654932 4:-88420349 None:intergenic
GATCAAGAACTTTAGACATG+AGG 0.658137 4:-88418193 None:intergenic
GTTCTCGGAAACGGATATGG+CGG 0.683221 4:-88418235 None:intergenic
GAAGGCACTGAAGACCCTTG+AGG 0.696373 4:-88420385 None:intergenic
ATAGGCAGGACAAAATCCAG+AGG 0.715818 4:-88421234 None:intergenic
TACATCACCTAAGACATCGG+CGG 0.726868 4:-88418261 None:intergenic
AGTGTTCGAAGAATCAGGCG+AGG 0.728618 4:-88421126 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAATTAATATTGCA+CGG + Chr4:88419049-88419068 MsG0480023673.01.T01:intron 10.0%
!! AATTAAGAACAAAAAAAAAT+CGG - Chr4:88419892-88419911 None:intergenic 10.0%
!! ACTATTTATCTTATAAAATA+TGG - Chr4:88418629-88418648 None:intergenic 10.0%
!! GTAAAATTACTAAAAATAAT+TGG - Chr4:88418997-88419016 None:intergenic 10.0%
!! TAATTATTAATGTTTGAAAA+TGG - Chr4:88418366-88418385 None:intergenic 10.0%
!! AAAATGTATTCTATAAAAAG+AGG + Chr4:88419767-88419786 MsG0480023673.01.T01:intron 15.0%
!! AAATAAATAAGGGTAAAATA+GGG + Chr4:88419076-88419095 MsG0480023673.01.T01:intron 15.0%
!! AAATAATTTCCACAATTATT+TGG + Chr4:88418549-88418568 MsG0480023673.01.T01:intron 15.0%
!! AATTATTTCAATTTAGAAAG+AGG - Chr4:88420481-88420500 None:intergenic 15.0%
!! GACAAATATGTAAAATAAAT+AGG + Chr4:88419702-88419721 MsG0480023673.01.T01:intron 15.0%
!! TAAATAAATAAGGGTAAAAT+AGG + Chr4:88419075-88419094 MsG0480023673.01.T01:intron 15.0%
!! TAATATTTCAATTTGTGATT+TGG + Chr4:88420021-88420040 MsG0480023673.01.T01:intron 15.0%
!! TCATTATGAATTAATTGTAT+AGG + Chr4:88420532-88420551 MsG0480023673.01.T01:intron 15.0%
!! TTGTTCTTAATTAGTAATAT+AGG + Chr4:88419900-88419919 MsG0480023673.01.T01:intron 15.0%
!!! ATCAATAATTGTTTTTTTAG+AGG + Chr4:88418447-88418466 MsG0480023673.01.T01:intron 15.0%
!!! ATTTAAGATTTTCTATATTC+AGG + Chr4:88418335-88418354 MsG0480023673.01.T01:intron 15.0%
!!! ATTTAGAATGTTAAAATACT+TGG + Chr4:88419976-88419995 MsG0480023673.01.T01:intron 15.0%
!!! TGAATTTTCTTAAATTTTGT+TGG + Chr4:88418849-88418868 MsG0480023673.01.T01:intron 15.0%
!!! TTTAGTCTTATCATATTTAT+AGG + Chr4:88421020-88421039 MsG0480023673.01.T01:intron 15.0%
!! AATAAATAAGGGTAAAATAG+GGG + Chr4:88419077-88419096 MsG0480023673.01.T01:intron 20.0%
!! ACAATTAATTCATAATGACA+TGG - Chr4:88420530-88420549 None:intergenic 20.0%
!! ATTAGATTACCAAATAATTG+TGG - Chr4:88418561-88418580 None:intergenic 20.0%
!! ATTCAATACTAGTATGAAAT+AGG + Chr4:88419422-88419441 MsG0480023673.01.T01:intron 20.0%
!! TATGAATTATGATAACTCTT+AGG + Chr4:88419507-88419526 MsG0480023673.01.T01:intron 20.0%
!! TCAAGATAATTAAGAAAAAC+TGG + Chr4:88419621-88419640 MsG0480023673.01.T01:intron 20.0%
!! TGTAACATAAATGTAATCAA+GGG - Chr4:88420280-88420299 None:intergenic 20.0%
!! TTGTAACATAAATGTAATCA+AGG - Chr4:88420281-88420300 None:intergenic 20.0%
!!! AAACAATTATTGATTGATAG+AGG - Chr4:88418441-88418460 None:intergenic 20.0%
!!! ATATCATTGATTCTAATCAT+TGG - Chr4:88418700-88418719 None:intergenic 20.0%
!!! GACTTTAATTTCAATTTGTA+CGG - Chr4:88418410-88418429 None:intergenic 20.0%
!!! GTTTTGTTGTATAAAATCAT+AGG - Chr4:88421255-88421274 None:intergenic 20.0%
!!! TATTTTAGAACCATTATTTG+TGG - Chr4:88419563-88419582 None:intergenic 20.0%
!!! TCTAGTATTTTTCTTGTATA+TGG - Chr4:88419167-88419186 None:intergenic 20.0%
!!! TTCTTTTCTAATTCTTTTTC+TGG + Chr4:88418311-88418330 MsG0480023673.01.T01:CDS 20.0%
!!! TTTTGTAATCTTTATCCAAA+CGG + Chr4:88418906-88418925 MsG0480023673.01.T01:CDS 20.0%
!!! TTTTTTTCTGCTTTTTTTGA+GGG + Chr4:88419251-88419270 MsG0480023673.01.T01:intron 20.0%
!!! TTTTTTTTCTGCTTTTTTTG+AGG + Chr4:88419250-88419269 MsG0480023673.01.T01:intron 20.0%
! AATCTAGCAATATATTTGTC+TGG - Chr4:88420505-88420524 None:intergenic 25.0%
! AATTTAGAAAGAGGACAAAA+TGG - Chr4:88420472-88420491 None:intergenic 25.0%
! ACAAATATAAGGGATTGAAT+TGG + Chr4:88420805-88420824 MsG0480023673.01.T01:intron 25.0%
! AGAGTTATCATAATTCATAC+AGG - Chr4:88419506-88419525 None:intergenic 25.0%
! ATCAAGAACTAATTTCCTTA+TGG - Chr4:88421370-88421389 None:intergenic 25.0%
! CCATATCTTGTAATAAAACT+TGG - Chr4:88418723-88418742 None:intergenic 25.0%
! GCACGGATTTAAATAAATAA+GGG + Chr4:88419066-88419085 MsG0480023673.01.T01:intron 25.0%
! GTAACATAAATGTAATCAAG+GGG - Chr4:88420279-88420298 None:intergenic 25.0%
! TAACATAAATGTAATCAAGG+GGG - Chr4:88420278-88420297 None:intergenic 25.0%
! TAATTACAAGTTTGTAATCG+CGG - Chr4:88420843-88420862 None:intergenic 25.0%
! TACTGTAATTGTTGATATTG+CGG + Chr4:88420863-88420882 MsG0480023673.01.T01:intron 25.0%
! TATATTCTCTCCACAAATAA+TGG + Chr4:88419550-88419569 MsG0480023673.01.T01:intron 25.0%
! TGCACGGATTTAAATAAATA+AGG + Chr4:88419065-88419084 MsG0480023673.01.T01:intron 25.0%
! TTAATTATCTTGATCTAGCA+TGG - Chr4:88419614-88419633 None:intergenic 25.0%
!! CAATAAGTCAATGATGATTT+TGG - Chr4:88421288-88421307 None:intergenic 25.0%
!! TATATGGAACTTTTCACATT+TGG + Chr4:88419465-88419484 MsG0480023673.01.T01:intron 25.0%
!! TGATTTTCATTCAACATAGA+CGG + Chr4:88419308-88419327 MsG0480023673.01.T01:intron 25.0%
!! TTTCATACTAGTATTGAATG+TGG - Chr4:88419421-88419440 None:intergenic 25.0%
!! TTTGTACGGTTTTTCTAATT+AGG - Chr4:88418396-88418415 None:intergenic 25.0%
!!! AAGTGGGGTATTATATTTTT+TGG - Chr4:88419197-88419216 None:intergenic 25.0%
!!! AGGCAAGAATTTTTTTCTAT+AGG + Chr4:88419787-88419806 MsG0480023673.01.T01:intron 25.0%
!!! AGTTTTATTACAAGATATGG+TGG + Chr4:88418723-88418742 MsG0480023673.01.T01:intron 25.0%
!!! CAAAATCATCATTGACTTAT+TGG + Chr4:88421286-88421305 MsG0480023673.01.T01:CDS 25.0%
!!! CCAAGTTTTATTACAAGATA+TGG + Chr4:88418720-88418739 MsG0480023673.01.T01:intron 25.0%
AAAAAACTAGTTGCTCTCAT+TGG - Chr4:88419235-88419254 None:intergenic 30.0%
AAAATGGTTACTTGTATCTC+AGG - Chr4:88420456-88420475 None:intergenic 30.0%
AAATAATTGGAAAGCTAACC+TGG - Chr4:88418984-88419003 None:intergenic 30.0%
AAATACTTGGCTCAAGAAAA+TGG + Chr4:88419989-88420008 MsG0480023673.01.T01:intron 30.0%
AACGCATATCAGATAATGAA+TGG - Chr4:88418496-88418515 None:intergenic 30.0%
AATTGCTGCAATTATGGAAA+TGG - Chr4:88420415-88420434 None:intergenic 30.0%
AGCTCACAAACACAAATATA+AGG + Chr4:88420794-88420813 MsG0480023673.01.T01:intron 30.0%
ATCGTACAAATCTAGAAATG+CGG - Chr4:88418828-88418847 None:intergenic 30.0%
CACTATCAAACAGCTTAAAT+TGG - Chr4:88421398-88421417 None:intergenic 30.0%
CATCAAACTCTTCAAAATGT+TGG - Chr4:88420684-88420703 None:intergenic 30.0%
GCGATTAAACTTGATATTGT+AGG + Chr4:88420312-88420331 MsG0480023673.01.T01:intron 30.0%
GCTCACAAACACAAATATAA+GGG + Chr4:88420795-88420814 MsG0480023673.01.T01:intron 30.0%
GTAGAATGTCACCAAAATTA+CGG - Chr4:88420615-88420634 None:intergenic 30.0%
TGAGTAGTAAGTTAGTAACA+AGG + Chr4:88418787-88418806 MsG0480023673.01.T01:intron 30.0%
TGTTGTATAAAATCATAGGC+AGG - Chr4:88421251-88421270 None:intergenic 30.0%
TTGGATCAACATTTCAATCA+TGG + Chr4:88421305-88421324 MsG0480023673.01.T01:CDS 30.0%
! ACACTTTACATGATTTTCTG+TGG + Chr4:88421144-88421163 MsG0480023673.01.T01:CDS 30.0%
! ATACTAGTATTGAATGTGGA+TGG - Chr4:88419417-88419436 None:intergenic 30.0%
! CCATAATTGCAGCAATTTTT+GGG + Chr4:88420418-88420437 MsG0480023673.01.T01:CDS 30.0%
! TAAGTCAATGATGATTTTGG+AGG - Chr4:88421285-88421304 None:intergenic 30.0%
! TATGTGTTATGCCGTAATTT+TGG + Chr4:88420601-88420620 MsG0480023673.01.T01:CDS 30.0%
! TCAAGTTGCTTATGAGATAA+TGG + Chr4:88421050-88421069 MsG0480023673.01.T01:CDS 30.0%
! TCCATAATTGCAGCAATTTT+TGG + Chr4:88420417-88420436 MsG0480023673.01.T01:CDS 30.0%
!! ATTGTAAAGGCTTTGGAAAT+TGG - Chr4:88420943-88420962 None:intergenic 30.0%
!! GATTGAATTGGTTTGAACTA+TGG + Chr4:88420817-88420836 MsG0480023673.01.T01:intron 30.0%
!! TGAGATAATGGAGAAGAAAT+CGG + Chr4:88421062-88421081 MsG0480023673.01.T01:CDS 30.0%
!!! TTTTATTTTGCTTCCGATAG+TGG + Chr4:88419837-88419856 MsG0480023673.01.T01:intron 30.0%
AATTATGGAAATGGCAGTGA+AGG - Chr4:88420406-88420425 None:intergenic 35.0%
ACTCTTCAAAATGTTGGAGT+TGG - Chr4:88420678-88420697 None:intergenic 35.0%
AGTGAGTGACAATCTGAAAA+CGG + Chr4:88419355-88419374 MsG0480023673.01.T01:intron 35.0%
CATATACACCATAGTGATAG+GGG - Chr4:88419451-88419470 None:intergenic 35.0%
CCATATACACCATAGTGATA+GGG - Chr4:88419452-88419471 None:intergenic 35.0%
CCATTGATGTCTCCAAAAAA+CGG - Chr4:88421189-88421208 None:intergenic 35.0%
CCCAAAAATTGCTGCAATTA+TGG - Chr4:88420421-88420440 None:intergenic 35.0%
GAGAAGAAACACTCAACAAA+AGG - Chr4:88418666-88418685 None:intergenic 35.0%
GATCAACATTTCAATCATGG+TGG + Chr4:88421308-88421327 MsG0480023673.01.T01:CDS 35.0%
GATCAAGAACTTTAGACATG+AGG - Chr4:88418196-88418215 None:intergenic 35.0%
GATTACATCACCTAAGACAT+CGG - Chr4:88418267-88418286 None:intergenic 35.0%
GCAACTGGAAAGATGATAAA+AGG + Chr4:88420572-88420591 MsG0480023673.01.T01:CDS 35.0%
TCCATATACACCATAGTGAT+AGG - Chr4:88419453-88419472 None:intergenic 35.0%
TTACGGCATAACACATAGTA+AGG - Chr4:88420598-88420617 None:intergenic 35.0%
TTTATCATCTTTCCAGTTGC+AGG - Chr4:88420572-88420591 None:intergenic 35.0%
! TGTAAAGTGTTCGAAGAATC+AGG - Chr4:88421134-88421153 None:intergenic 35.0%
!! ATTGCAGCAATTTTTGGGAA+TGG + Chr4:88420423-88420442 MsG0480023673.01.T01:CDS 35.0%
!! TGTTGGTTTCATTGATGACA+GGG + Chr4:88418866-88418885 MsG0480023673.01.T01:intron 35.0%
!! TTGTTGGTTTCATTGATGAC+AGG + Chr4:88418865-88418884 MsG0480023673.01.T01:intron 35.0%
AAAGATCCGACATCCACTAT+CGG - Chr4:88419853-88419872 None:intergenic 40.0%
AAGAGTTTGATGCCAGATGA+TGG + Chr4:88420692-88420711 MsG0480023673.01.T01:CDS 40.0%
ACTGTACGACTTCATAGCAA+TGG + Chr4:88420095-88420114 MsG0480023673.01.T01:CDS 40.0%
AGTGTTTCTTCTCTCTCGTA+AGG + Chr4:88418673-88418692 MsG0480023673.01.T01:intron 40.0%
ATCAAAAAATGCCCCTCCAA+GGG + Chr4:88420338-88420357 MsG0480023673.01.T01:CDS 40.0%
ATCCAAACGGCAATCAATAC+CGG + Chr4:88418919-88418938 MsG0480023673.01.T01:CDS 40.0%
CAAAGACCGTCACATTGTAA+AGG - Chr4:88420956-88420975 None:intergenic 40.0%
CACATTTGGTCCACTTTGTT+TGG + Chr4:88419479-88419498 MsG0480023673.01.T01:intron 40.0%
CCAAAGCCTTTACAATGTGA+CGG + Chr4:88420947-88420966 MsG0480023673.01.T01:intron 40.0%
CCCTATCACTATGGTGTATA+TGG + Chr4:88419449-88419468 MsG0480023673.01.T01:intron 40.0%
CTTCTTCAACTCTTCGCAAT+CGG + Chr4:88420764-88420783 MsG0480023673.01.T01:CDS 40.0%
CTTGATCATTGCGAAAATGC+CGG + Chr4:88418209-88418228 MsG0480023673.01.T01:CDS 40.0%
GAATACAAGCACCAACTACA+AGG - Chr4:88420218-88420237 None:intergenic 40.0%
GTAGTTGCTATAAGTCGTAG+AGG + Chr4:88420914-88420933 MsG0480023673.01.T01:intron 40.0%
GTCTTTGCAGGTTGCAATTT+CGG + Chr4:88420969-88420988 MsG0480023673.01.T01:intron 40.0%
GTGAGTGACAATCTGAAAAC+GGG + Chr4:88419356-88419375 MsG0480023673.01.T01:intron 40.0%
GTTGATATTGCGGACAAATG+CGG + Chr4:88420873-88420892 MsG0480023673.01.T01:intron 40.0%
TAATTGGAAAGCTAACCTGG+AGG - Chr4:88418981-88419000 None:intergenic 40.0%
TACAGTTTCAATGCTCCATG+TGG - Chr4:88420081-88420100 None:intergenic 40.0%
TACTCCAATATTGCACCACA+TGG + Chr4:88420063-88420082 MsG0480023673.01.T01:CDS 40.0%
TCATACAGGTCCAAACAAAG+TGG - Chr4:88419492-88419511 None:intergenic 40.0%
TGCTTGTATTCATGCAGGTA+TGG + Chr4:88420227-88420246 MsG0480023673.01.T01:intron 40.0%
! AGTGGATGTCGGATCTTTTA+TGG + Chr4:88419855-88419874 MsG0480023673.01.T01:intron 40.0%
! GCGAGGAAGAAGATTTCTTT+TGG - Chr4:88421112-88421131 None:intergenic 40.0%
! GTCGGATCTTTTATGGAACA+GGG + Chr4:88419862-88419881 MsG0480023673.01.T01:intron 40.0%
! TCGGATCTTTTATGGAACAG+GGG + Chr4:88419863-88419882 MsG0480023673.01.T01:intron 40.0%
! TGTCGGATCTTTTATGGAAC+AGG + Chr4:88419861-88419880 MsG0480023673.01.T01:intron 40.0%
! TGTTCCCTTTTTCTCAGCTT+GGG + Chr4:88420183-88420202 MsG0480023673.01.T01:CDS 40.0%
!! AACACAAGTTGATGTGTCGT+AGG - Chr4:88420167-88420186 None:intergenic 40.0%
!! ACACAAGTTGATGTGTCGTA+GGG - Chr4:88420166-88420185 None:intergenic 40.0%
!! CTCATTGGTGTCACTATCAT+GGG - Chr4:88419220-88419239 None:intergenic 40.0%
!! GCTGTTTGATAGTGAAGTTG+TGG + Chr4:88421404-88421423 MsG0480023673.01.T01:CDS 40.0%
!! GTTTCTGGGTATTGGGTATT+TGG + Chr4:88420644-88420663 MsG0480023673.01.T01:CDS 40.0%
!! TCTCATTGGTGTCACTATCA+TGG - Chr4:88419221-88419240 None:intergenic 40.0%
!!! CCGTTTTTTGGAGACATCAA+TGG + Chr4:88421186-88421205 MsG0480023673.01.T01:CDS 40.0%
AAATCGGCAGATGTGAAGCA+AGG + Chr4:88421078-88421097 MsG0480023673.01.T01:CDS 45.0%
AAGACCCTTGAGGATTCCTT+AGG - Chr4:88420378-88420397 None:intergenic 45.0%
AATCGGCAGATGTGAAGCAA+GGG + Chr4:88421079-88421098 MsG0480023673.01.T01:CDS 45.0%
ACAAGCACCAACTACAAGGA+AGG - Chr4:88420214-88420233 None:intergenic 45.0%
AGCATGGACAAGCTAACAAG+TGG - Chr4:88419598-88419617 None:intergenic 45.0%
ATAGGCAGGACAAAATCCAG+AGG - Chr4:88421237-88421256 None:intergenic 45.0%
ATAGGTGACCCCTATCACTA+TGG + Chr4:88419440-88419459 MsG0480023673.01.T01:intron 45.0%
ATCATCTTTCCAGTTGCAGG+AGG - Chr4:88420569-88420588 None:intergenic 45.0%
ATTCACTGGTGCAGGAATCA+TGG + Chr4:88421332-88421351 MsG0480023673.01.T01:CDS 45.0%
CATCAAAAAATGCCCCTCCA+AGG + Chr4:88420337-88420356 MsG0480023673.01.T01:CDS 45.0%
CATGAGGCAGTAAGAGTAGA+AGG - Chr4:88418180-88418199 None:intergenic 45.0%
CCGTCACATTGTAAAGGCTT+TGG - Chr4:88420950-88420969 None:intergenic 45.0%
GACAATCTGAAAACGGGTGA+TGG + Chr4:88419362-88419381 MsG0480023673.01.T01:intron 45.0%
GGAACCTAAGGAATCCTCAA+GGG + Chr4:88420371-88420390 MsG0480023673.01.T01:CDS 45.0%
GGACTATTCCTTGGAACCTA+AGG + Chr4:88420359-88420378 MsG0480023673.01.T01:CDS 45.0%
GTAGCCCAAGCTGAGAAAAA+GGG - Chr4:88420190-88420209 None:intergenic 45.0%
TACAATGTGACGGTCTTTGC+AGG + Chr4:88420957-88420976 MsG0480023673.01.T01:intron 45.0%
TACATCACCTAAGACATCGG+CGG - Chr4:88418264-88418283 None:intergenic 45.0%
TCAATCATGGTGGCATTCAC+TGG + Chr4:88421318-88421337 MsG0480023673.01.T01:CDS 45.0%
TCTACTCTGCTGCAGTTTCT+GGG + Chr4:88420630-88420649 MsG0480023673.01.T01:CDS 45.0%
TGAGGATTCCTTAGGTTCCA+AGG - Chr4:88420370-88420389 None:intergenic 45.0%
TGCTCCATGTGGTGCAATAT+TGG - Chr4:88420070-88420089 None:intergenic 45.0%
TGGAACCTAAGGAATCCTCA+AGG + Chr4:88420370-88420389 MsG0480023673.01.T01:CDS 45.0%
TGTAGCCCAAGCTGAGAAAA+AGG - Chr4:88420191-88420210 None:intergenic 45.0%
TGTCACTATCATGGGAAGTG+GGG - Chr4:88419212-88419231 None:intergenic 45.0%
TGTCGTAGGGAATGGAAAGT+GGG - Chr4:88420153-88420172 None:intergenic 45.0%
TTCACTGGTGCAGGAATCAT+GGG + Chr4:88421333-88421352 MsG0480023673.01.T01:CDS 45.0%
TTCTACTCTGCTGCAGTTTC+TGG + Chr4:88420629-88420648 MsG0480023673.01.T01:CDS 45.0%
! ACCTTCTTTGGCTCCAACTT+GGG + Chr4:88420715-88420734 MsG0480023673.01.T01:CDS 45.0%
! AGTTGATGTGTCGTAGGGAA+TGG - Chr4:88420161-88420180 None:intergenic 45.0%
! GGTTTCATTGATGACAGGGT+CGG + Chr4:88418870-88418889 MsG0480023673.01.T01:intron 45.0%
! GTGTCACTATCATGGGAAGT+GGG - Chr4:88419213-88419232 None:intergenic 45.0%
! GTGTTCCCTTTTTCTCAGCT+TGG + Chr4:88420182-88420201 MsG0480023673.01.T01:CDS 45.0%
! GTTGGTGCTTGTATTCATGC+AGG + Chr4:88420222-88420241 MsG0480023673.01.T01:CDS 45.0%
! GTTTCATTGATGACAGGGTC+GGG + Chr4:88418871-88418890 MsG0480023673.01.T01:intron 45.0%
! TGCTGCAGTTTCTGGGTATT+GGG + Chr4:88420637-88420656 MsG0480023673.01.T01:CDS 45.0%
!! TGCTGTTGGTTTCATTCCTC+TGG + Chr4:88421218-88421237 MsG0480023673.01.T01:CDS 45.0%
!! TTGCTTCCGATAGTGGATGT+CGG + Chr4:88419844-88419863 MsG0480023673.01.T01:intron 45.0%
!! TTTTGGAGACATCAATGGCG+TGG + Chr4:88421191-88421210 MsG0480023673.01.T01:CDS 45.0%
!!! GCAGCTATGTTGCCGTTTTT+TGG + Chr4:88421174-88421193 MsG0480023673.01.T01:CDS 45.0%
AGTGTTCGAAGAATCAGGCG+AGG - Chr4:88421129-88421148 None:intergenic 50.0%
CAAAGACGATAGCGAGTCCA+AGG - Chr4:88420742-88420761 None:intergenic 50.0%
CAAGGAATAGTCCCTTGGAG+GGG - Chr4:88420352-88420371 None:intergenic 50.0%
CCAAGGAATAGTCCCTTGGA+GGG - Chr4:88420353-88420372 None:intergenic 50.0%
CGAGTTCTCGGAAACGGATA+TGG - Chr4:88418241-88418260 None:intergenic 50.0%
GAAATGCGGTTCTGCACGAT+TGG - Chr4:88418814-88418833 None:intergenic 50.0%
GCCAAAGAAGGTCCATCATC+TGG - Chr4:88420707-88420726 None:intergenic 50.0%
GGCTACACCTTCCTTGTAGT+TGG + Chr4:88420204-88420223 MsG0480023673.01.T01:CDS 50.0%
GGTTCCAAGGAATAGTCCCT+TGG - Chr4:88420357-88420376 None:intergenic 50.0%
GTGTCGTAGGGAATGGAAAG+TGG - Chr4:88420154-88420173 None:intergenic 50.0%
GTTCTCGGAAACGGATATGG+CGG - Chr4:88418238-88418257 None:intergenic 50.0%
TCAACTCTTCGCAATCGGTC+TGG + Chr4:88420769-88420788 MsG0480023673.01.T01:CDS 50.0%
TCCAAGGAATAGTCCCTTGG+AGG - Chr4:88420354-88420373 None:intergenic 50.0%
TGGGTGCATTCTCGTCCATA+AGG + Chr4:88421352-88421371 MsG0480023673.01.T01:CDS 50.0%
! ACCCAAGTTGGAGCCAAAGA+AGG - Chr4:88420719-88420738 None:intergenic 50.0%
! CTGCTGCAGTTTCTGGGTAT+TGG + Chr4:88420636-88420655 MsG0480023673.01.T01:CDS 50.0%
! GACCTTCTTTGGCTCCAACT+TGG + Chr4:88420714-88420733 MsG0480023673.01.T01:CDS 50.0%
!! GCCAGATGATGGACCTTCTT+TGG + Chr4:88420703-88420722 MsG0480023673.01.T01:CDS 50.0%
!! GGTGTCACTATCATGGGAAG+TGG - Chr4:88419214-88419233 None:intergenic 50.0%
ACGGCAATCAATACCGGCGT+TGG + Chr4:88418925-88418944 MsG0480023673.01.T01:CDS 55.0%
ACTCTAGCACCTCCTGCAAC+TGG + Chr4:88420557-88420576 MsG0480023673.01.T01:CDS 55.0%
ATGGTGGCATTCACTGGTGC+AGG + Chr4:88421324-88421343 MsG0480023673.01.T01:CDS 55.0%
CCCTCCAAGGGACTATTCCT+TGG + Chr4:88420350-88420369 MsG0480023673.01.T01:CDS 55.0%
GGAGACATCAATGGCGTGGT+TGG + Chr4:88421195-88421214 MsG0480023673.01.T01:CDS 55.0%
TTGGCTCCAACTTGGGTCCT+TGG + Chr4:88420722-88420741 MsG0480023673.01.T01:CDS 55.0%
! CATTGATGACAGGGTCGGGT+TGG + Chr4:88418875-88418894 MsG0480023673.01.T01:intron 55.0%
!! AATGGCGTGGTTGGTGCTGT+TGG + Chr4:88421204-88421223 MsG0480023673.01.T01:CDS 55.0%
!! ATCAATACCGGCGTTGGCGT+AGG + Chr4:88418931-88418950 MsG0480023673.01.T01:CDS 55.0%
!! CGCCGGTATTGATTGCCGTT+TGG - Chr4:88418924-88418943 None:intergenic 55.0%
!! GAAGGCACTGAAGACCCTTG+AGG - Chr4:88420388-88420407 None:intergenic 55.0%
!! TCAATACCGGCGTTGGCGTA+GGG + Chr4:88418932-88418951 MsG0480023673.01.T01:CDS 55.0%
AGACATCGGCGGCGAGTTCT+CGG - Chr4:88418253-88418272 None:intergenic 60.0%
GAAACGGATATGGCGGCGAC+CGG - Chr4:88418231-88418250 None:intergenic 60.0%
GAACTCGCCGCCGATGTCTT+AGG + Chr4:88418254-88418273 MsG0480023673.01.T01:CDS 60.0%
GCGAGTCCAAGGACCCAAGT+TGG - Chr4:88420731-88420750 None:intergenic 60.0%
GTAGGGGCAATCCTGCTTGC+TGG + Chr4:88418949-88418968 MsG0480023673.01.T01:CDS 60.0%
! GCTTGCTGGTCAATGCCTCC+AGG + Chr4:88418963-88418982 MsG0480023673.01.T01:CDS 60.0%
!! CAATACCGGCGTTGGCGTAG+GGG + Chr4:88418933-88418952 MsG0480023673.01.T01:CDS 60.0%
!! GGAGGCATTGACCAGCAAGC+AGG - Chr4:88418963-88418982 None:intergenic 60.0%
CGGCGGCGAGTTCTCGGAAA+CGG - Chr4:88418247-88418266 None:intergenic 65.0%
GATTGCCCCTACGCCAACGC+CGG - Chr4:88418941-88418960 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr4 gene 88418164 88421431 88418164 ID=MsG0480023673.01;Name=MsG0480023673.01
Chr4 mRNA 88418164 88421431 88418164 ID=MsG0480023673.01.T01;Parent=MsG0480023673.01;Name=MsG0480023673.01.T01;_AED=0.49;_eAED=0.49;_QI=0|0|0|1|1|0.83|6|0|403
Chr4 exon 88418164 88418332 88418164 ID=MsG0480023673.01.T01:exon:12352;Parent=MsG0480023673.01.T01
Chr4 exon 88418887 88418984 88418887 ID=MsG0480023673.01.T01:exon:12353;Parent=MsG0480023673.01.T01
Chr4 exon 88420057 88420243 88420057 ID=MsG0480023673.01.T01:exon:12354;Parent=MsG0480023673.01.T01
Chr4 exon 88420334 88420464 88420334 ID=MsG0480023673.01.T01:exon:12355;Parent=MsG0480023673.01.T01
Chr4 exon 88420554 88420790 88420554 ID=MsG0480023673.01.T01:exon:12356;Parent=MsG0480023673.01.T01
Chr4 exon 88421042 88421431 88421042 ID=MsG0480023673.01.T01:exon:12357;Parent=MsG0480023673.01.T01
Chr4 CDS 88418164 88418332 88418164 ID=MsG0480023673.01.T01:cds;Parent=MsG0480023673.01.T01
Chr4 CDS 88418887 88418984 88418887 ID=MsG0480023673.01.T01:cds;Parent=MsG0480023673.01.T01
Chr4 CDS 88420057 88420243 88420057 ID=MsG0480023673.01.T01:cds;Parent=MsG0480023673.01.T01
Chr4 CDS 88420334 88420464 88420334 ID=MsG0480023673.01.T01:cds;Parent=MsG0480023673.01.T01
Chr4 CDS 88420554 88420790 88420554 ID=MsG0480023673.01.T01:cds;Parent=MsG0480023673.01.T01
Chr4 CDS 88421042 88421431 88421042 ID=MsG0480023673.01.T01:cds;Parent=MsG0480023673.01.T01
Gene Sequence

>MsG0480023673.01.T01

ATGGGTCTTGTAACCTTCTACTCTTACTGCCTCATGTCTAAAGTTCTTGATCATTGCGAAAATGCCGGTCGCCGCCATATCCGTTTCCGAGAACTCGCCGCCGATGTCTTAGGTGATGTAATCTTTACTTTGCACGTTTGCATTGTGTTCTTTTCTAATTCTTTTTCTGGGTCGGGTTGGATGTTCTATTTTGTAATCTTTATCCAAACGGCAATCAATACCGGCGTTGGCGTAGGGGCAATCCTGCTTGCTGGTCAATGCCTCCAGATCGTGTACTCCAATATTGCACCACATGGAGCATTGAAACTGTACGACTTCATAGCAATGGTGACAGTAGTCATGATAATTTTGTCTCAGCTTCCCACTTTCCATTCCCTACGACACATCAACTTGTGTTCCCTTTTTCTCAGCTTGGGCTACACCTTCCTTGTAGTTGGTGCTTGTATTCATGCAGGTACATCAAAAAATGCCCCTCCAAGGGACTATTCCTTGGAACCTAAGGAATCCTCAAGGGTCTTCAGTGCCTTCACTGCCATTTCCATAATTGCAGCAATTTTTGGGAATGGCATATTACCTGAGATACAAGCAACTCTAGCACCTCCTGCAACTGGAAAGATGATAAAAGGCCTTACTATGTGTTATGCCGTAATTTTGGTGACATTCTACTCTGCTGCAGTTTCTGGGTATTGGGTATTTGGAAACAAGTCCAACTCCAACATTTTGAAGAGTTTGATGCCAGATGATGGACCTTCTTTGGCTCCAACTTGGGTCCTTGGACTCGCTATCGTCTTTGTTCTTCTTCAACTCTTCGCAATCGGTCTGGTTTATTCTCAAGTTGCTTATGAGATAATGGAGAAGAAATCGGCAGATGTGAAGCAAGGGATGTTTTCCAAAAGAAATCTTCTTCCTCGCCTGATTCTTCGAACACTTTACATGATTTTCTGTGGATTTCTAGCAGCTATGTTGCCGTTTTTTGGAGACATCAATGGCGTGGTTGGTGCTGTTGGTTTCATTCCTCTGGATTTTGTCCTGCCTATGATTTTATACAACAAAACACACAAGCCTCCAAAATCATCATTGACTTATTGGATCAACATTTCAATCATGGTGGCATTCACTGGTGCAGGAATCATGGGTGCATTCTCGTCCATAAGGAAATTAGTTCTTGATGCTAACCAATTTAAGCTGTTTGATAGTGAAGTTGTGGATTGA
Protein sequence

>MsG0480023673.01.T01

MGLVTFYSYCLMSKVLDHCENAGRRHIRFRELAADVLGDVIFTLHVCIVFFSNSFSGSGWMFYFVIFIQTAINTGVGVGAILLAGQCLQIVYSNIAPHGALKLYDFIAMVTVVMIILSQLPTFHSLRHINLCSLFLSLGYTFLVVGACIHAGTSKNAPPRDYSLEPKESSRVFSAFTAISIIAAIFGNGILPEIQATLAPPATGKMIKGLTMCYAVILVTFYSAAVSGYWVFGNKSNSNILKSLMPDDGPSLAPTWVLGLAIVFVLLQLFAIGLVYSQVAYEIMEKKSADVKQGMFSKRNLLPRLILRTLYMIFCGFLAAMLPFFGDINGVVGAVGFIPLDFVLPMILYNKTHKPPKSSLTYWINISIMVAFTGAGIMGAFSSIRKLVLDANQFKLFDSEVVD*