AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280007201.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280007201.01.T01 MTR_2g022490 95.227 419 15 1 1 419 1 414 0.0 795
MsG0280007201.01.T01 MTR_2g022490 81.658 398 70 1 425 819 27 424 0.0 646
MsG0280007201.01.T01 MTR_2g022480 87.073 410 52 1 1 409 1 410 0.0 730
MsG0280007201.01.T01 MTR_2g022480 81.220 410 74 1 413 819 21 430 0.0 651
MsG0280007201.01.T01 MTR_2g022320 58.000 400 152 6 429 819 24 416 4.59e-148 441
MsG0280007201.01.T01 MTR_2g022320 56.057 421 154 9 10 420 8 407 7.21e-135 407
MsG0280007201.01.T01 MTR_2g022430 53.431 408 163 11 427 819 25 420 2.50e-131 398
MsG0280007201.01.T01 MTR_2g022430 51.972 431 175 11 1 419 1 411 1.58e-128 391
MsG0280007201.01.T01 MTR_2g022380 55.528 407 156 10 427 819 25 420 3.08e-130 396
MsG0280007201.01.T01 MTR_2g022380 52.204 431 175 10 1 420 1 411 9.86e-123 377
MsG0280007201.01.T01 MTR_2g022370 55.721 402 155 10 429 819 27 416 1.52e-129 394
MsG0280007201.01.T01 MTR_2g022370 51.740 431 173 12 1 420 1 407 6.17e-120 369
MsG0280007201.01.T01 MTR_2g022350 55.283 407 157 10 427 819 25 420 4.18e-129 393
MsG0280007201.01.T01 MTR_2g022350 53.132 431 171 10 1 420 1 411 1.03e-123 379
MsG0280007201.01.T01 MTR_4g117090 49.409 423 180 9 425 819 33 449 4.50e-118 365
MsG0280007201.01.T01 MTR_4g117090 47.229 415 184 9 32 419 33 439 5.41e-112 349
MsG0280007201.01.T01 MTR_0252s0030 82.775 209 35 1 191 399 140 347 9.13e-116 355
MsG0280007201.01.T01 MTR_0252s0030 80.383 209 40 1 581 789 140 347 1.44e-112 347
MsG0280007201.01.T01 MTR_1g072420 41.492 429 214 11 9 419 8 417 4.51e-84 275
MsG0280007201.01.T01 MTR_1g072420 40.670 418 206 9 425 819 29 427 7.57e-82 269
MsG0280007201.01.T01 MTR_1g072450 40.559 429 217 11 9 419 8 416 1.83e-79 263
MsG0280007201.01.T01 MTR_1g072450 40.909 418 204 10 425 819 29 426 2.68e-79 262
MsG0280007201.01.T01 MTR_1g072380 39.379 419 228 9 18 418 22 432 3.10e-75 252
MsG0280007201.01.T01 MTR_1g072380 37.838 444 220 10 408 818 22 442 1.08e-74 251
MsG0280007201.01.T01 MTR_2g022450 38.462 416 218 11 425 819 24 422 1.56e-72 244
MsG0280007201.01.T01 MTR_2g022450 36.124 418 250 7 17 425 9 418 4.02e-70 238
MsG0280007201.01.T01 MTR_1g093100 37.472 443 228 14 2 419 1 419 1.67e-63 220
MsG0280007201.01.T01 MTR_1g093100 36.386 415 223 11 425 815 28 425 1.16e-57 204
MsG0280007201.01.T01 MTR_7g113790 33.559 444 243 17 2 419 1 418 1.87e-58 206
MsG0280007201.01.T01 MTR_7g113790 33.875 431 246 15 408 819 18 428 8.86e-56 198
MsG0280007201.01.T01 MTR_2g022460 35.381 407 215 12 431 819 29 405 4.12e-51 185
MsG0280007201.01.T01 MTR_2g022460 35.176 398 217 11 35 419 26 395 5.27e-51 184
MsG0280007201.01.T01 MTR_7g105850 27.725 422 222 20 434 807 74 460 2.08e-21 99.0
MsG0280007201.01.T01 MTR_7g105850 24.648 426 239 17 41 420 74 463 1.04e-17 87.4
MsG0280007201.01.T01 MTR_7g062360 25.954 393 225 13 52 415 63 418 2.34e-16 82.8
MsG0280007201.01.T01 MTR_3g046300 24.935 385 243 12 442 808 98 454 6.51e-16 81.6
MsG0280007201.01.T01 MTR_3g046300 24.745 392 238 16 49 418 98 454 1.04e-12 71.6
MsG0280007201.01.T01 MTR_2g028190 23.410 393 227 18 442 808 103 447 2.96e-15 79.7
MsG0280007201.01.T01 MTR_2g028190 24.619 394 222 18 49 417 103 446 4.56e-15 79.0
MsG0280007201.01.T01 MTR_7g021510 23.457 405 235 16 45 418 69 429 1.04e-14 78.2
MsG0280007201.01.T01 MTR_7g021510 22.622 389 237 14 438 799 69 420 1.06e-14 78.2
MsG0280007201.01.T01 MTR_2g022330 64.912 57 15 1 763 819 32 83 2.58e-14 69.3
MsG0280007201.01.T01 MTR_2g022330 66.000 50 12 1 373 422 32 76 8.62e-13 65.1
MsG0280007201.01.T01 MTR_1g078240 23.929 397 242 16 46 419 67 426 3.72e-14 76.3
MsG0280007201.01.T01 MTR_1g078240 23.472 409 247 15 439 817 67 439 2.52e-12 70.5
MsG0280007201.01.T01 MTR_3g068000 24.194 434 248 18 425 810 39 439 4.05e-14 76.3
MsG0280007201.01.T01 MTR_5g091130 23.058 399 234 14 442 808 192 549 8.83e-14 75.5
MsG0280007201.01.T01 MTR_5g091130 23.980 392 242 13 49 418 192 549 3.45e-13 73.6
MsG0280007201.01.T01 MTR_5g016260 24.000 425 223 22 420 807 65 426 1.73e-13 74.7
MsG0280007201.01.T01 MTR_1g093130 32.468 154 88 4 622 774 6 144 2.23e-13 69.7
MsG0280007201.01.T01 MTR_1g093130 35.135 148 80 4 238 384 12 144 5.54e-13 68.6
MsG0280007201.01.T01 MTR_5g016260 24.000 425 223 22 420 807 65 426 2.43e-13 74.3
MsG0280007201.01.T01 MTR_8g103880 24.286 350 203 16 439 769 114 420 3.27e-13 73.2
MsG0280007201.01.T01 MTR_8g103880 24.165 389 218 18 46 413 114 446 1.65e-12 70.9
MsG0280007201.01.T01 MTR_7g080230 24.812 399 237 16 45 419 68 427 5.75e-13 72.4
MsG0280007201.01.T01 MTR_7g080230 23.834 386 234 13 438 799 68 417 1.11e-12 71.6
MsG0280007201.01.T01 MTR_1g078240 23.869 398 242 17 46 419 67 427 1.06e-12 71.6
MsG0280007201.01.T01 MTR_1g078240 23.415 410 247 16 439 817 67 440 7.14e-11 65.9
MsG0280007201.01.T01 MTR_1g061940 23.245 413 230 16 436 808 75 440 1.79e-12 70.9
MsG0280007201.01.T01 MTR_1g061940 22.439 410 240 15 43 418 75 440 5.35e-11 66.2
MsG0280007201.01.T01 MTR_3g097150 24.557 395 230 16 49 424 103 448 4.73e-12 69.3
MsG0280007201.01.T01 MTR_7g117430 24.219 384 229 16 442 808 142 480 6.43e-12 69.3
MsG0280007201.01.T01 MTR_5g077850 23.790 248 163 7 175 417 206 432 8.08e-12 68.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280007201.01.T01 AT1G03220 38.128 438 223 11 405 819 13 425 7.14e-78 259
MsG0280007201.01.T01 AT1G03220 39.394 429 224 12 8 419 6 415 2.63e-77 257
MsG0280007201.01.T01 AT1G03230 38.005 421 219 9 422 819 25 426 6.32e-77 256
MsG0280007201.01.T01 AT1G03230 38.647 414 209 9 29 419 25 416 1.40e-75 253
MsG0280007201.01.T01 AT5G19110 33.562 438 224 15 404 819 7 399 3.86e-52 187
MsG0280007201.01.T01 AT5G19110 32.009 428 224 14 11 418 8 388 5.00e-47 173
MsG0280007201.01.T01 AT5G19110 33.551 459 233 17 387 819 23 435 6.44e-52 188
MsG0280007201.01.T01 AT5G19110 32.009 428 224 14 11 418 44 424 7.42e-47 174
MsG0280007201.01.T01 AT5G19100 34.375 416 197 14 424 819 25 384 3.38e-46 170
MsG0280007201.01.T01 AT5G19100 33.250 400 190 14 32 412 26 367 3.81e-45 167
MsG0280007201.01.T01 AT5G19120 30.769 429 239 15 1 421 1 379 2.67e-37 144
MsG0280007201.01.T01 AT5G19120 30.361 415 231 14 404 807 8 375 4.90e-31 126
MsG0280007201.01.T01 AT5G48430 35.294 255 136 8 172 419 158 390 1.73e-34 137
MsG0280007201.01.T01 AT5G48430 35.472 265 140 9 562 818 158 399 1.27e-33 134
MsG0280007201.01.T01 AT5G36260 24.129 402 252 16 38 420 64 431 1.64e-15 80.5
MsG0280007201.01.T01 AT5G36260 22.628 411 258 16 431 819 64 436 4.68e-13 72.8
MsG0280007201.01.T01 AT3G12700 25.765 392 238 16 43 417 100 455 1.89e-15 80.5
MsG0280007201.01.T01 AT3G25700 24.299 428 262 18 410 808 51 445 2.86e-15 79.7
MsG0280007201.01.T01 AT3G25700 23.664 393 250 13 49 420 84 447 7.12e-15 78.6
MsG0280007201.01.T01 AT2G39710 23.661 448 272 17 405 817 23 435 1.35e-14 77.4
MsG0280007201.01.T01 AT2G39710 23.797 395 235 15 52 417 68 425 2.21e-13 73.6
MsG0280007201.01.T01 AT3G02740 20.551 399 255 11 440 817 8 365 1.92e-14 76.6
MsG0280007201.01.T01 AT3G02740 20.681 411 261 12 431 817 71 440 2.28e-14 77.0
MsG0280007201.01.T01 AT2G36670 25.495 404 225 16 46 419 102 459 1.25e-13 74.7
MsG0280007201.01.T01 AT2G36670 25.310 403 225 16 47 419 32 388 2.77e-13 73.6
MsG0280007201.01.T01 AT2G36670 25.310 403 225 16 47 419 32 388 2.77e-13 73.6
MsG0280007201.01.T01 AT5G10770 22.513 382 231 16 445 808 135 469 3.32e-13 73.2
MsG0280007201.01.T01 AT2G36670 25.310 403 225 16 47 419 98 454 3.47e-13 73.6
MsG0280007201.01.T01 AT1G08210 24.685 397 234 18 46 418 81 436 4.09e-13 73.2
MsG0280007201.01.T01 AT1G08210 23.116 398 236 19 439 808 81 436 1.85e-12 70.9
MsG0280007201.01.T01 AT1G08210 24.685 397 234 18 46 418 115 470 4.46e-13 73.2
MsG0280007201.01.T01 AT1G08210 23.116 398 236 19 439 808 115 470 1.82e-12 71.2
MsG0280007201.01.T01 AT1G08210 24.685 397 234 18 46 418 129 484 6.58e-13 72.8
MsG0280007201.01.T01 AT1G08210 23.116 398 236 19 439 808 129 484 2.57e-12 70.9
MsG0280007201.01.T01 AT5G37540 24.490 441 262 19 9 418 34 434 7.40e-13 72.0
MsG0280007201.01.T01 AT5G37540 24.235 425 255 15 412 810 53 436 4.45e-11 66.6
MsG0280007201.01.T01 AT5G02190 24.427 393 223 12 58 415 82 435 1.04e-12 71.6
MsG0280007201.01.T01 AT3G59080 21.717 396 244 16 442 808 170 528 4.36e-12 70.1
MsG0280007201.01.T01 AT3G59080 23.590 390 245 14 49 417 170 527 3.84e-11 67.0
MsG0280007201.01.T01 AT1G79720 23.832 428 255 17 403 805 94 475 1.83e-11 67.8
MsG0280007201.01.T01 AT2G42980 24.810 395 238 16 49 418 160 520 4.78e-11 66.6
MsG0280007201.01.T01 AT1G66180 23.934 422 256 19 18 417 43 421 5.75e-11 65.9

Find 160 sgRNAs with CRISPR-Local

Find 362 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGGAATTATGGTACTAATTT+TGG 0.097837 2:+11864787 None:intergenic
AATTTGGACAATTCCTTAAA+AGG 0.148678 2:+11864980 None:intergenic
GGTTGATGGGTCCTTCTTTA+TGG 0.173967 2:+11861120 None:intergenic
CGTTGTAGTTTGAACAAATT+TGG 0.188560 2:+11864964 None:intergenic
GGAATCTGTGGCACCATTTA+AGG 0.197944 2:-11860267 MsG0280007201.01.T01:CDS
TTGAGGAAATCACGAATAAA+TGG 0.233059 2:+11864734 None:intergenic
GAGCTTTAGTTCCTCACTTT+TGG 0.244667 2:-11860000 MsG0280007201.01.T01:CDS
AGGTAAACAAAGAGAGAATT+TGG 0.245088 2:+11865057 None:intergenic
ACAAAAGCATCAATTGTTAT+TGG 0.247297 2:-11864491 MsG0280007201.01.T01:CDS
CAATTCAGTGAAAGGAATTA+TGG 0.259910 2:+11864775 None:intergenic
TTTGTTGTCTATTGACAAAA+AGG 0.271056 2:-11860408 MsG0280007201.01.T01:CDS
TGGTGTGGTTTGAAGAAATT+TGG 0.277077 2:+11860550 None:intergenic
GCTAGATTGAAATTTGTTCT+AGG 0.282741 2:+11865487 None:intergenic
ACAAAAGCTTCAATTGTTAT+TGG 0.287512 2:-11860077 MsG0280007201.01.T01:CDS
TTGAGGAAATCACGAATAAA+TGG 0.287695 2:+11860320 None:intergenic
CTTTACACTAACCATCAAAT+TGG 0.297149 2:+11864571 None:intergenic
AATGAGTTTGTTGCAGTTGC+TGG 0.302169 2:+11865307 None:intergenic
AACCTAGTCATTGATCTTGC+TGG 0.304622 2:-11861049 MsG0280007201.01.T01:CDS
GAGTCAAAACATGCCTTAAA+TGG 0.306128 2:+11860254 None:intergenic
AATCTAGCCATTGATCTTGC+TGG 0.314723 2:-11865472 MsG0280007201.01.T01:CDS
GCCACCACTGAAAATGAAAT+TGG 0.315786 2:+11860859 None:intergenic
GTTGATGGGTCCTTCTTTAT+GGG 0.318101 2:+11861121 None:intergenic
TCAATTGGAGGACAATCTTT+TGG 0.329783 2:-11864462 MsG0280007201.01.T01:CDS
TGAGGAACTGAAGCTCAATT+TGG 0.334065 2:+11864421 None:intergenic
CAACAGGTGCTATCTTTGTT+CGG 0.342402 2:-11860508 MsG0280007201.01.T01:CDS
ATCTTGCTGGAGAGAACTTA+TGG 0.347344 2:-11865459 MsG0280007201.01.T01:CDS
TGAGGAACTAAAGCTCAATT+TGG 0.348577 2:+11860007 None:intergenic
AACAGGTGCTATCTTTGTTC+GGG 0.348995 2:-11860507 MsG0280007201.01.T01:CDS
TATTCATGAAAGCAATTTGA+TGG 0.358099 2:-11860168 MsG0280007201.01.T01:CDS
TGTCCAGATATTACATGTAT+TGG 0.358276 2:-11860950 MsG0280007201.01.T01:CDS
TGAAAGCAATTTGATGGTTA+TGG 0.359944 2:-11860162 MsG0280007201.01.T01:CDS
TATTCATGAAGCCAATTTGA+TGG 0.363709 2:-11864582 MsG0280007201.01.T01:CDS
CTGAAAATGAAATTGGCAAA+TGG 0.365428 2:+11860866 None:intergenic
TGCAAGACCAATAATTCCTT+TGG 0.365460 2:+11860718 None:intergenic
TGTTATTGGTGGACATCAAT+TGG 0.365921 2:-11864477 MsG0280007201.01.T01:CDS
TCAATTGGAAGACAATCTTT+TGG 0.368615 2:-11860048 MsG0280007201.01.T01:CDS
CAACCAATACATGTAATATC+TGG 0.373921 2:+11860947 None:intergenic
ACCGGTGCAGTTTCTGTTCA+AGG 0.386574 2:-11864920 MsG0280007201.01.T01:CDS
ATAGTGAGAGGAGGAAGAAA+TGG 0.388910 2:+11865635 None:intergenic
AACTTGCTTGCTGGATCAAT+TGG 0.389806 2:-11865010 MsG0280007201.01.T01:CDS
TGTTATTGGTGGACATCAAT+TGG 0.392955 2:-11860063 MsG0280007201.01.T01:CDS
ATCTTGCTGGAGATAACCTT+TGG 0.397661 2:-11861036 MsG0280007201.01.T01:CDS
CTTCTTTATGGGAAGGATGA+AGG 0.402418 2:+11861132 None:intergenic
GTTTGTGCAACCTGGTTTGA+AGG 0.406745 2:+11860916 None:intergenic
AACTTGTTTGTTCGATCAGT+TGG 0.411546 2:-11860596 MsG0280007201.01.T01:CDS
TCAATAAAATATTCATTTGA+AGG 0.412304 2:+11860479 None:intergenic
AGTGAATCCTTGTTTATTTG+AGG 0.412448 2:+11865033 None:intergenic
ATTTGGACAATTCCTTAAAA+GGG 0.413986 2:+11864981 None:intergenic
GGATTCACTAACTTGCTTGC+TGG 0.416328 2:-11865019 MsG0280007201.01.T01:CDS
TCCATCGGTGTCAATACAAC+TGG 0.423645 2:+11860784 None:intergenic
AGAAACTGCACCGGTTGAAA+CGG 0.428011 2:+11864928 None:intergenic
AATCTATTCTACTCATCAAT+TGG 0.428026 2:-11861097 MsG0280007201.01.T01:CDS
AAGATAGCACCTGTTGAAAC+AGG 0.428528 2:+11860515 None:intergenic
GCATGTTTGGCATTTGTTGA+TGG 0.428754 2:-11860125 MsG0280007201.01.T01:CDS
AATCCTTGTTTGTTTGAAGA+AGG 0.430489 2:+11860623 None:intergenic
TGTTCAGATGTTGCATGTAT+TGG 0.435645 2:-11865373 MsG0280007201.01.T01:CDS
GAAACTGCACCGGTTGAAAC+GGG 0.436100 2:+11864929 None:intergenic
GAGTTGATCTTGTGCTTCAA+GGG 0.437076 2:-11860205 MsG0280007201.01.T01:CDS
ATTGTCAATCCTGTTTCAAC+AGG 0.441741 2:-11860524 MsG0280007201.01.T01:CDS
AGAGTTGACCTTGTTCTTCA+AGG 0.449400 2:-11864620 MsG0280007201.01.T01:CDS
GCATGTCTTGGAATTGTTGA+TGG 0.450249 2:-11864539 MsG0280007201.01.T01:CDS
ATAAGCATGAAAGTGAGAAA+AGG 0.452237 2:+11865611 None:intergenic
ATTGTCAATCCCGTTTCAAC+CGG 0.453852 2:-11864938 MsG0280007201.01.T01:CDS
CATGTGTTGTTTGTGCAACC+TGG 0.457876 2:+11860908 None:intergenic
GTCAAAGAGGTGAAGGTTGA+TGG 0.459292 2:-11864869 MsG0280007201.01.T01:CDS
TTTGTGCAACCTGGTTTGAA+TGG 0.459577 2:+11865340 None:intergenic
AGAGTTGATCTTGTGCTTCA+AGG 0.461452 2:-11860206 MsG0280007201.01.T01:CDS
TAAGCATGAAAGTGAGAAAA+GGG 0.461606 2:+11865612 None:intergenic
AAAGCTTCAATTGTTATTGG+TGG 0.463122 2:-11860074 MsG0280007201.01.T01:CDS
AATTTGGACAATGCATGAAA+AGG 0.466078 2:+11860566 None:intergenic
GTGAAAGCGGTTAAGATTGA+TGG 0.469456 2:-11860455 MsG0280007201.01.T01:CDS
GTTGCATGTATTGGTTGTAA+TGG 0.472158 2:-11865364 MsG0280007201.01.T01:CDS
TGAAAATGAAATTGGCAAAT+GGG 0.473781 2:+11860867 None:intergenic
CATGTATTGTTTGTGCAACC+TGG 0.473788 2:+11865331 None:intergenic
ATTTGGACAATGCATGAAAA+GGG 0.473854 2:+11860567 None:intergenic
TTCTTTATGGGAAGGATGAA+GGG 0.480376 2:+11861133 None:intergenic
TTCTTCAAGGTGGAGTGCAA+TGG 0.481106 2:-11864607 MsG0280007201.01.T01:CDS
GGTAAACAAAGAGAGAATTT+GGG 0.483765 2:+11865058 None:intergenic
TGAAGAACAAGGTCAACTCT+TGG 0.484524 2:+11864623 None:intergenic
ATGGGAAGGATGAAGGGGTG+TGG 0.486044 2:+11861139 None:intergenic
GAAGAACAAGGTCAACTCTT+GGG 0.486591 2:+11864624 None:intergenic
TGCAATGGCCCCTTCAAACC+AGG 0.489280 2:-11860926 MsG0280007201.01.T01:CDS
AAAGCATCAATTGTTATTGG+TGG 0.492139 2:-11864488 MsG0280007201.01.T01:CDS
ATGGGTCCTTCTTTATGGGA+AGG 0.493904 2:+11861125 None:intergenic
TATTCGTGATTTCCTCAAGA+AGG 0.501598 2:-11860315 MsG0280007201.01.T01:CDS
TATTCGTGATTTCCTCAAGA+AGG 0.501598 2:-11864729 MsG0280007201.01.T01:CDS
TTGTCTATAGACAACAAAGA+AGG 0.504419 2:+11864827 None:intergenic
ATTACATGTATTGGTTGCAA+TGG 0.507765 2:-11860941 MsG0280007201.01.T01:CDS
CAATTCAGTGAAAGGACTCA+TGG 0.507792 2:+11860361 None:intergenic
GAGTCAAAACATGCTTCAAA+TGG 0.508055 2:+11864668 None:intergenic
GGAACTAAAGCTCAATTTGG+AGG 0.509955 2:+11860010 None:intergenic
TTTGTGCAACCTGGTTTGAA+GGG 0.512585 2:+11860917 None:intergenic
CAAGCTGAGTTGGTAATGAA+AGG 0.513852 2:+11860687 None:intergenic
GAACTTTGCAATTCAGTGAA+AGG 0.515239 2:+11864767 None:intergenic
AATCTATTCTACACATCAGT+TGG 0.520917 2:-11865520 MsG0280007201.01.T01:CDS
AATCCTTGTTTATTTGAGGA+AGG 0.521147 2:+11865037 None:intergenic
GATAGACTTCCATCATTCAC+TGG 0.521963 2:-11865190 MsG0280007201.01.T01:CDS
TATTGATGTCAAAGAGGTGA+AGG 0.524978 2:-11864876 MsG0280007201.01.T01:CDS
TTGCTTGCTGGATCAATTGG+TGG 0.529342 2:-11865007 MsG0280007201.01.T01:CDS
AATTGATGAGTAGAATAGAT+TGG 0.534848 2:+11861099 None:intergenic
AGTAGAATAGATTGGTTGAT+GGG 0.537198 2:+11861107 None:intergenic
ATAGGAAGAATGAAGGATTG+TGG 0.541111 2:+11865562 None:intergenic
GGAGAGGATTCACCACTCAA+TGG 0.542394 2:-11865169 MsG0280007201.01.T01:CDS
ACAGGTGCTATCTTTGTTCG+GGG 0.543235 2:-11860506 MsG0280007201.01.T01:CDS
CAAGTTGTGTTGGTAGTGAA+AGG 0.545446 2:+11865101 None:intergenic
GTTCTCTCCAGCAAGATCAA+TGG 0.552026 2:+11865465 None:intergenic
TCCAGTTGTATTGACACCGA+TGG 0.553190 2:-11860785 MsG0280007201.01.T01:CDS
GAATCCTCTCCAGTGAATGA+TGG 0.558095 2:+11865181 None:intergenic
GAGTAGAATAGATTGGTTGA+TGG 0.559559 2:+11861106 None:intergenic
GTGTAGAATAGATTGGTTGA+TGG 0.559559 2:+11865529 None:intergenic
TTCTATCTGAAGCCTTCTTG+AGG 0.560794 2:+11864717 None:intergenic
CTTCATCCTTCCCATAAAGA+AGG 0.562732 2:-11861131 MsG0280007201.01.T01:CDS
GTGAGAAAAGGGATAGTGAG+AGG 0.565891 2:+11865623 None:intergenic
AAACAAAGAGAGAATTTGTG+TGG 0.567678 2:+11860647 None:intergenic
TCAATAAAATATTCAACTGA+AGG 0.569468 2:+11864893 None:intergenic
TTCTATCTGAAGCCTTCTTG+AGG 0.570165 2:+11860303 None:intergenic
GCCACATTCAATTGGAATGT+AGG 0.571023 2:+11860982 None:intergenic
TGTAGAATAGATTGGTTGAT+GGG 0.573951 2:+11865530 None:intergenic
TGAAGCACAAGATCAACTCT+TGG 0.578393 2:+11860209 None:intergenic
AACTGATGTGTAGAATAGAT+TGG 0.584643 2:+11865522 None:intergenic
ATGGAAGTCTATCAATGTCA+AGG 0.586097 2:+11865200 None:intergenic
CTCCAGCAAGATCAATGACT+AGG 0.586177 2:+11861047 None:intergenic
TATTGGTGGACATCAATTGG+AGG 0.587141 2:-11864474 MsG0280007201.01.T01:CDS
TTGTCAATAGACAACAAAGA+GGG 0.589499 2:+11860413 None:intergenic
AGATAGAAGACTAAAGAGAG+TGG 0.592700 2:-11860288 MsG0280007201.01.T01:CDS
TTCTACTCATCAATTGGCAT+AGG 0.598098 2:-11861091 MsG0280007201.01.T01:CDS
GTCTTGGAATTGTTGATGGA+GGG 0.598231 2:-11864535 MsG0280007201.01.T01:CDS
AGAAAAGGGATAGTGAGAGG+AGG 0.600374 2:+11865626 None:intergenic
ATTAGGAACAACTTGCATTG+TGG 0.600479 2:+11859976 None:intergenic
ATCATATGATGAAAATCCAT+CGG 0.606840 2:+11860769 None:intergenic
GTTGACCTTGTTCTTCAAGG+TGG 0.607145 2:-11864617 MsG0280007201.01.T01:CDS
AGTTGATCTTGTGCTTCAAG+GGG 0.607368 2:-11860204 MsG0280007201.01.T01:CDS
AAACAAAGAGAGAATTTGGG+TGG 0.608993 2:+11865061 None:intergenic
TTACCTTCCTCAAATAAACA+AGG 0.611824 2:-11865040 MsG0280007201.01.T01:CDS
TTGTGCAACCTGGTTTGAAG+GGG 0.612755 2:+11860918 None:intergenic
AAGGCAACTTGAGAGCAAGC+CGG 0.615888 2:+11865219 None:intergenic
ACTTCCATCATTCACTGGAG+AGG 0.619134 2:-11865185 MsG0280007201.01.T01:CDS
TCATATGATTCACCACTCAA+CGG 0.621221 2:-11860755 MsG0280007201.01.T01:CDS
TTTGTCAATAGACAACAAAG+AGG 0.622903 2:+11860412 None:intergenic
TTACCTTCTTCAAACAAACA+AGG 0.624242 2:-11860626 MsG0280007201.01.T01:CDS
TCCTACATTCCAATTGAATG+TGG 0.627877 2:-11860983 MsG0280007201.01.T01:CDS
TCTTTATGGGAAGGATGAAG+GGG 0.628701 2:+11861134 None:intergenic
TGTAATGGTCCATTCAAACC+AGG 0.633054 2:-11865349 MsG0280007201.01.T01:CDS
TGCATTGTGGACCAAAAGTG+AGG 0.637111 2:+11859989 None:intergenic
TTCTACACATCAGTTGGCAT+AGG 0.638976 2:-11865514 MsG0280007201.01.T01:CDS
GCCTTGAACAGAAACTGCAC+CGG 0.640996 2:+11864919 None:intergenic
GAATGTCACAATCATACCAA+AGG 0.644192 2:+11861020 None:intergenic
ACAATGCATGAAAAGGGTCA+CGG 0.645491 2:+11860573 None:intergenic
TGTCTTGGAATTGTTGATGG+AGG 0.646313 2:-11864536 MsG0280007201.01.T01:CDS
TGAAAATGAAATCTTCACCA+AGG 0.649806 2:+11865260 None:intergenic
TGTTTGGCATTTGTTGATGG+AGG 0.651260 2:-11860122 MsG0280007201.01.T01:CDS
GCACTCCACCTTGAAGAACA+AGG 0.651442 2:+11864612 None:intergenic
TCCTACGTTCCAATTGCATG+TGG 0.656325 2:-11865406 MsG0280007201.01.T01:CDS
ACTAAAGAGAGTGGAATCTG+TGG 0.666431 2:-11860279 MsG0280007201.01.T01:CDS
GAAACAGGATTGACAATGAG+TGG 0.671495 2:+11860530 None:intergenic
ACTAAAGAGAGTGCAATCAG+TGG 0.679373 2:-11864693 MsG0280007201.01.T01:CDS
CAAATATGATATCTTCACCA+AGG 0.682574 2:+11860837 None:intergenic
GTTGATCTTGTGCTTCAAGG+GGG 0.697899 2:-11860203 MsG0280007201.01.T01:CDS
AGGATTGACAATGAGTGGTG+TGG 0.708267 2:+11860535 None:intergenic
GCCACATGCAATTGGAACGT+AGG 0.708323 2:+11865405 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATATTAAGTTTTTATTTTG+AGG + Chr2:11861477-11861496 None:intergenic 10.0%
!!! GATTTATATTTTTTTTCAAA+AGG - Chr2:11862960-11862979 MsG0280007201.01.T01:intron 10.0%
!! AATATTAAAAAAACTAACCA+AGG + Chr2:11863575-11863594 None:intergenic 15.0%
!! ATATTAAAAAAACTAACCAA+GGG + Chr2:11863574-11863593 None:intergenic 15.0%
!! CTAAAAAATTGTGAAAAAAT+GGG - Chr2:11862309-11862328 MsG0280007201.01.T01:intron 15.0%
!! CTGTTACAAAATATATAAAT+TGG + Chr2:11862034-11862053 None:intergenic 15.0%
!! TCAATAAAATATTCATTTGA+AGG + Chr2:11865159-11865178 None:intergenic 15.0%
!! TCTAAAAAATTGTGAAAAAA+TGG - Chr2:11862308-11862327 MsG0280007201.01.T01:intron 15.0%
!!! AAAGTAATTTATTTGTTTTG+AGG + Chr2:11863148-11863167 None:intergenic 15.0%
!!! AAATCTTGAATTTAGTTTTA+CGG + Chr2:11863107-11863126 None:intergenic 15.0%
!!! AAGTAATTTATTTGTTTTGA+GGG + Chr2:11863147-11863166 None:intergenic 15.0%
!!! AATAATTTTTTGATTTGGTT+CGG + Chr2:11863307-11863326 None:intergenic 15.0%
!!! ATTGTAAATTAAGATTTTCT+AGG + Chr2:11862375-11862394 None:intergenic 15.0%
!!! ATTTTCATATTATAATGTGA+TGG + Chr2:11861909-11861928 None:intergenic 15.0%
!!! CACTTATATTTTTATGTTAT+AGG - Chr2:11862717-11862736 MsG0280007201.01.T01:intron 15.0%
!!! GAGAATATGATTTTTTTTAA+TGG - Chr2:11863701-11863720 MsG0280007201.01.T01:intron 15.0%
!!! TTATATATTTTGTAACAGTT+AGG - Chr2:11862036-11862055 MsG0280007201.01.T01:intron 15.0%
!!! TTTATAGATAAAAGTATGAT+AGG - Chr2:11863992-11864011 MsG0280007201.01.T01:intron 15.0%
!!! TTTTCATATTATAATGTGAT+GGG + Chr2:11861908-11861927 None:intergenic 15.0%
!! AAAAAAAAAAAAATTGTCCC+CGG + Chr2:11862398-11862417 None:intergenic 20.0%
!! AAAAACACAAAAGGAATTAT+TGG - Chr2:11860496-11860515 MsG0280007201.01.T01:CDS 20.0%
!! AAAACAATCACAAATTTACA+TGG + Chr2:11861433-11861452 None:intergenic 20.0%
!! AAAATCTTAATTTACAATCC+GGG - Chr2:11862377-11862396 MsG0280007201.01.T01:intron 20.0%
!! AAACAATCACAAATTTACAT+GGG + Chr2:11861432-11861451 None:intergenic 20.0%
!! AAATTCTACTCTTGAATTAA+TGG - Chr2:11861265-11861284 MsG0280007201.01.T01:intron 20.0%
!! AAGAATAAAATTTCCTAATG+TGG - Chr2:11864065-11864084 MsG0280007201.01.T01:intron 20.0%
!! AATGAAAAAGTTTAAGTGAT+AGG + Chr2:11863521-11863540 None:intergenic 20.0%
!! AGGAGTAAAATTTGTAAAAT+GGG + Chr2:11863410-11863429 None:intergenic 20.0%
!! ATGTTAGCAATTTATACAAT+TGG - Chr2:11862080-11862099 MsG0280007201.01.T01:intron 20.0%
!! CTAAATTTAATTACAAGTCA+TGG - Chr2:11861703-11861722 MsG0280007201.01.T01:intron 20.0%
!! GAAAATCTTAATTTACAATC+CGG - Chr2:11862376-11862395 MsG0280007201.01.T01:intron 20.0%
!! GATAAAATAAAATAAGGTGA+TGG + Chr2:11864309-11864328 None:intergenic 20.0%
!! TAAATTGCTAACATTTGTTT+AGG + Chr2:11862074-11862093 None:intergenic 20.0%
!! TAATTCAAAATAGTTGAAAG+AGG + Chr2:11863021-11863040 None:intergenic 20.0%
!! TATTAAAAAAACTAACCAAG+GGG + Chr2:11863573-11863592 None:intergenic 20.0%
!! TCAATAAAATATTCAACTGA+AGG + Chr2:11860745-11860764 None:intergenic 20.0%
!! TGATATAATTATAGCATAAG+TGG - Chr2:11864128-11864147 MsG0280007201.01.T01:intron 20.0%
!! TTAATTCAAGAGTAGAATTT+AGG + Chr2:11861265-11861284 None:intergenic 20.0%
!!! AAATCAAACACAAATTTGTT+TGG - Chr2:11862202-11862221 MsG0280007201.01.T01:intron 20.0%
!!! AAGTTTTTATGTGAGTTAAA+GGG - Chr2:11864103-11864122 MsG0280007201.01.T01:intron 20.0%
!!! AATCCTTATTTGCATTTTAT+AGG - Chr2:11862826-11862845 MsG0280007201.01.T01:intron 20.0%
!!! AATGACTGTAGTTATATTTT+TGG - Chr2:11861979-11861998 MsG0280007201.01.T01:intron 20.0%
!!! ACAAAAGGTTTTATAACAAA+AGG - Chr2:11862938-11862957 MsG0280007201.01.T01:intron 20.0%
!!! ACTTTTAATTAATATCCTCT+TGG - Chr2:11861771-11861790 MsG0280007201.01.T01:intron 20.0%
!!! AGTGAGATTTAAAATATCAA+AGG - Chr2:11864188-11864207 MsG0280007201.01.T01:intron 20.0%
!!! ATAATTCCTTTTGTGTTTTT+TGG + Chr2:11860496-11860515 None:intergenic 20.0%
!!! ATATTTTATTGATGTCAAAG+AGG - Chr2:11860753-11860772 MsG0280007201.01.T01:CDS 20.0%
!!! ATATTTTATTGATGTGAAAG+CGG - Chr2:11865167-11865186 MsG0280007201.01.T01:CDS 20.0%
!!! ATGACTGTAGTTATATTTTT+GGG - Chr2:11861980-11861999 MsG0280007201.01.T01:intron 20.0%
!!! CTTTTAAGAAAATGTCATTT+GGG + Chr2:11863062-11863081 None:intergenic 20.0%
!!! TCTTTTAAGAAAATGTCATT+TGG + Chr2:11863063-11863082 None:intergenic 20.0%
!!! TTGAATATCTTATTTTACAG+TGG - Chr2:11864257-11864276 MsG0280007201.01.T01:intron 20.0%
! AAAAACACCAAAGGAATTAT+TGG - Chr2:11864910-11864929 MsG0280007201.01.T01:CDS 25.0%
! AAACTCGTTCAATTTCATTT+GGG + Chr2:11861848-11861867 None:intergenic 25.0%
! AAATCTTAATTTACAATCCG+GGG - Chr2:11862378-11862397 MsG0280007201.01.T01:intron 25.0%
! AATCTATTCTACTCATCAAT+TGG - Chr2:11864538-11864557 MsG0280007201.01.T01:CDS 25.0%
! AATCTCATAAGTGTATAAAG+AGG + Chr2:11863430-11863449 None:intergenic 25.0%
! AATTGATGAGTAGAATAGAT+TGG + Chr2:11864539-11864558 None:intergenic 25.0%
! AATTTGGACAATTCCTTAAA+AGG + Chr2:11860658-11860677 None:intergenic 25.0%
! AATTTGTAAAATGGGGTTTA+TGG + Chr2:11863402-11863421 None:intergenic 25.0%
! ACAAAAGCTTCAATTGTTAT+TGG - Chr2:11865558-11865577 MsG0280007201.01.T01:CDS 25.0%
! AGAACATGGAAAACAAAATA+TGG - Chr2:11863622-11863641 MsG0280007201.01.T01:intron 25.0%
! ATCATATGATGAAAATCCAT+CGG + Chr2:11864869-11864888 None:intergenic 25.0%
! ATTTGGACAATTCCTTAAAA+GGG + Chr2:11860657-11860676 None:intergenic 25.0%
! GAGGAGTAAAATTTGTAAAA+TGG + Chr2:11863411-11863430 None:intergenic 25.0%
! GGAGTAAAATTTGTAAAATG+GGG + Chr2:11863409-11863428 None:intergenic 25.0%
! GTTAATCAACAAAAAGTTTC+TGG - Chr2:11864820-11864839 MsG0280007201.01.T01:CDS 25.0%
! GTTCCTATAAAATGCAAATA+AGG + Chr2:11862832-11862851 None:intergenic 25.0%
! TAAATCGATGAACATTTGTT+CGG - Chr2:11863795-11863814 MsG0280007201.01.T01:intron 25.0%
! TACAGTATTTCAGAGAATAA+AGG + Chr2:11863936-11863955 None:intergenic 25.0%
! TATTCATGAAAGCAATTTGA+TGG - Chr2:11865467-11865486 MsG0280007201.01.T01:CDS 25.0%
! TCTATAGACAAAAAAGGAAA+TGG - Chr2:11860820-11860839 MsG0280007201.01.T01:CDS 25.0%
! TGAAAATGAAATTGGCAAAT+GGG + Chr2:11864771-11864790 None:intergenic 25.0%
! TGACAATTATCTTCTTATGT+TGG + Chr2:11861648-11861667 None:intergenic 25.0%
! TGAGCAGGTATAAATAATTA+AGG - Chr2:11862644-11862663 MsG0280007201.01.T01:intron 25.0%
! TGTTTAAAAAACAGAGAACA+TGG - Chr2:11863608-11863627 MsG0280007201.01.T01:intron 25.0%
! TTAAGGAATATTGAATTGAG+AGG - Chr2:11862661-11862680 MsG0280007201.01.T01:intron 25.0%
! TTGTTGTCTATAGACAAAAA+AGG - Chr2:11860814-11860833 MsG0280007201.01.T01:CDS 25.0%
! TTGTTGTCTATTGACAAAAA+GGG - Chr2:11865228-11865247 MsG0280007201.01.T01:CDS 25.0%
! TTTCTAGGTGAGTAATATAA+AGG + Chr2:11862360-11862379 None:intergenic 25.0%
!! AGGAATTATGGTACTAATTT+TGG + Chr2:11860851-11860870 None:intergenic 25.0%
!! AGGACAAATTTTACAATTTG+TGG + Chr2:11862340-11862359 None:intergenic 25.0%
!! GAAGTTTTTATGTGAGTTAA+AGG - Chr2:11864102-11864121 MsG0280007201.01.T01:intron 25.0%
!! GAGATTTAAAATATCAAAGG+TGG - Chr2:11864191-11864210 MsG0280007201.01.T01:intron 25.0%
!! GTAAATTTTCCAATACAATC+TGG + Chr2:11863910-11863929 None:intergenic 25.0%
!! GTGACTTTTATTACCTTTTA+TGG + Chr2:11861536-11861555 None:intergenic 25.0%
!! TCATTAGCCAAATTCATTTT+TGG - Chr2:11860346-11860365 MsG0280007201.01.T01:CDS 25.0%
!! TTTGTTGTCTATTGACAAAA+AGG - Chr2:11865227-11865246 MsG0280007201.01.T01:CDS 25.0%
!!! AAGTTTTATTATTGGTTGAG+AGG + Chr2:11861755-11861774 None:intergenic 25.0%
!!! ACAAAAGCATCAATTGTTAT+TGG - Chr2:11861144-11861163 MsG0280007201.01.T01:CDS 25.0%
!!! ACTAGGTTGAAATTTTTTCT+AGG + Chr2:11864574-11864593 None:intergenic 25.0%
!!! AGTTTTTCTGAAAATCATAC+AGG - Chr2:11863185-11863204 MsG0280007201.01.T01:intron 25.0%
!!! ATAATTCCTTTGGTGTTTTT+TGG + Chr2:11864910-11864929 None:intergenic 25.0%
!!! ATTAAGGAGTATTTTATGCT+GGG + Chr2:11863469-11863488 None:intergenic 25.0%
!!! GAATTTTTCAATTCAGTGAA+AGG + Chr2:11865285-11865304 None:intergenic 25.0%
!!! GGTCGAATAATTTTTTGATT+TGG + Chr2:11863312-11863331 None:intergenic 25.0%
!!! TGTAGTTATATTTTTGGGTA+TGG - Chr2:11861985-11862004 MsG0280007201.01.T01:intron 25.0%
!!! TTTTTTGATAGGAAGAATGA+AGG + Chr2:11860083-11860102 None:intergenic 25.0%
AAAAATTATTCGACCTTGTC+TGG - Chr2:11863317-11863336 MsG0280007201.01.T01:intron 30.0%
AAACAAAGAGAGAATTTGTG+TGG + Chr2:11864991-11865010 None:intergenic 30.0%
AACTGATGTGTAGAATAGAT+TGG + Chr2:11860116-11860135 None:intergenic 30.0%
AAGAAAAATGTAGCATGTCT+TGG - Chr2:11861084-11861103 MsG0280007201.01.T01:CDS 30.0%
AATCTATTCTACACATCAGT+TGG - Chr2:11860115-11860134 MsG0280007201.01.T01:CDS 30.0%
AATTTGGACAATGCATGAAA+AGG + Chr2:11865072-11865091 None:intergenic 30.0%
AGGTAAACAAAGAGAGAATT+TGG + Chr2:11860581-11860600 None:intergenic 30.0%
AGTGAGACAAAATTGAATTG+AGG - Chr2:11862266-11862285 MsG0280007201.01.T01:intron 30.0%
ATAAGCATGAAAGTGAGAAA+AGG + Chr2:11860027-11860046 None:intergenic 30.0%
ATAGACAAAAAAGGAAATGG+TGG - Chr2:11860823-11860842 MsG0280007201.01.T01:CDS 30.0%
ATTTCGCAACAAAAAGTTTC+CGG - Chr2:11860397-11860416 MsG0280007201.01.T01:CDS 30.0%
ATTTGGACAATGCATGAAAA+GGG + Chr2:11865071-11865090 None:intergenic 30.0%
ATTTGGGAGTGAAATATTGT+TGG + Chr2:11863046-11863065 None:intergenic 30.0%
CAAACTCGTTCAATTTCATT+TGG + Chr2:11861849-11861868 None:intergenic 30.0%
CAAATATGATATCTTCACCA+AGG + Chr2:11864801-11864820 None:intergenic 30.0%
CAACCAATACATGTAATATC+TGG + Chr2:11864691-11864710 None:intergenic 30.0%
CAATTCAGTGAAAGGAATTA+TGG + Chr2:11860863-11860882 None:intergenic 30.0%
CGTTGTAGTTTGAACAAATT+TGG + Chr2:11860674-11860693 None:intergenic 30.0%
CTGAAAATGAAATTGGCAAA+TGG + Chr2:11864772-11864791 None:intergenic 30.0%
CTTTACACTAACCATCAAAT+TGG + Chr2:11861067-11861086 None:intergenic 30.0%
GAAGAAAAATGTAGCATGTT+TGG - Chr2:11865497-11865516 MsG0280007201.01.T01:CDS 30.0%
GGTAAACAAAGAGAGAATTT+GGG + Chr2:11860580-11860599 None:intergenic 30.0%
GTATTCGTGTGTAAAATCAT+TGG + Chr2:11861678-11861697 None:intergenic 30.0%
TAAGCATGAAAGTGAGAAAA+GGG + Chr2:11860026-11860045 None:intergenic 30.0%
TAAGTGCATGCAGATAAATT+AGG - Chr2:11862440-11862459 MsG0280007201.01.T01:intron 30.0%
TAAGTGGATATCATCATCAA+TGG - Chr2:11864144-11864163 MsG0280007201.01.T01:intron 30.0%
TAATTACAAGTCATGGTTTC+AGG - Chr2:11861710-11861729 MsG0280007201.01.T01:intron 30.0%
TATTAGTATGTATACCCACT+GGG - Chr2:11861313-11861332 MsG0280007201.01.T01:intron 30.0%
TATTCATGAAGCCAATTTGA+TGG - Chr2:11861053-11861072 MsG0280007201.01.T01:CDS 30.0%
TCTATTGACAAAAAGGGAAA+TGG - Chr2:11865234-11865253 MsG0280007201.01.T01:CDS 30.0%
TGAAAATGAAATCTTCACCA+AGG + Chr2:11860378-11860397 None:intergenic 30.0%
TGTCCAGATATTACATGTAT+TGG - Chr2:11864685-11864704 MsG0280007201.01.T01:CDS 30.0%
TTACCTTCCTCAAATAAACA+AGG - Chr2:11860595-11860614 MsG0280007201.01.T01:CDS 30.0%
TTACCTTCTTCAAACAAACA+AGG - Chr2:11865009-11865028 MsG0280007201.01.T01:CDS 30.0%
TTAGATCATGAGTCTGAAAA+TGG + Chr2:11862616-11862635 None:intergenic 30.0%
TTGAGGAAATCACGAATAAA+TGG + Chr2:11860904-11860923 None:intergenic 30.0%
TTGTCAATAGACAACAAAGA+GGG + Chr2:11865225-11865244 None:intergenic 30.0%
TTGTCTATAGACAACAAAGA+AGG + Chr2:11860811-11860830 None:intergenic 30.0%
TTTGTCAATAGACAACAAAG+AGG + Chr2:11865226-11865245 None:intergenic 30.0%
! AAAGCATCAATTGTTATTGG+TGG - Chr2:11861147-11861166 MsG0280007201.01.T01:CDS 30.0%
! AAAGCTTCAATTGTTATTGG+TGG - Chr2:11865561-11865580 MsG0280007201.01.T01:CDS 30.0%
! AAAGGTGGTATCTTTTTGAT+TGG - Chr2:11864206-11864225 MsG0280007201.01.T01:intron 30.0%
! AATCCTTGTTTATTTGAGGA+AGG + Chr2:11860601-11860620 None:intergenic 30.0%
! AATCCTTGTTTGTTTGAAGA+AGG + Chr2:11865015-11865034 None:intergenic 30.0%
! AGTAGAATAGATTGGTTGAT+GGG + Chr2:11864531-11864550 None:intergenic 30.0%
! AGTGAATCCTTGTTTATTTG+AGG + Chr2:11860605-11860624 None:intergenic 30.0%
! GAGGGTATAATCATAATCAT+TGG - Chr2:11864038-11864057 MsG0280007201.01.T01:intron 30.0%
! GCATTTTATAGGAACTACTT+TGG - Chr2:11862837-11862856 MsG0280007201.01.T01:intron 30.0%
! GCTAGATTGAAATTTGTTCT+AGG + Chr2:11860151-11860170 None:intergenic 30.0%
! GCTTTTGTAAATGACATTCT+TGG + Chr2:11861132-11861151 None:intergenic 30.0%
! TCAATTGGAAGACAATCTTT+TGG - Chr2:11865587-11865606 MsG0280007201.01.T01:CDS 30.0%
! TGAAAGCAATTTGATGGTTA+TGG - Chr2:11865473-11865492 MsG0280007201.01.T01:CDS 30.0%
! TGATGATGAAAGAAAGTGAA+CGG + Chr2:11863492-11863511 None:intergenic 30.0%
! TGTAGAATAGATTGGTTGAT+GGG + Chr2:11860108-11860127 None:intergenic 30.0%
! TTTCCATTGTAGTTGACTTA+CGG + Chr2:11862516-11862535 None:intergenic 30.0%
! TTTGCCAATTTCATTTTCAG+TGG - Chr2:11864772-11864791 MsG0280007201.01.T01:CDS 30.0%
! TTTTATAGGAACTACTTTGG+AGG - Chr2:11862840-11862859 MsG0280007201.01.T01:intron 30.0%
!! AAGGTGGTATCTTTTTGATT+GGG - Chr2:11864207-11864226 MsG0280007201.01.T01:intron 30.0%
!! AGTTGATTATTTTTCCCAGT+GGG + Chr2:11861330-11861349 None:intergenic 30.0%
!! ATTACATGTATTGGTTGCAA+TGG - Chr2:11864694-11864713 MsG0280007201.01.T01:CDS 30.0%
!! CATTAGTTATTTCTACCAAG+AGG + Chr2:11861789-11861808 None:intergenic 30.0%
!! TAGTTGATTATTTTTCCCAG+TGG + Chr2:11861331-11861350 None:intergenic 30.0%
!! TTAGCCAAATTCATTTTTGG+TGG - Chr2:11860349-11860368 MsG0280007201.01.T01:CDS 30.0%
!! TTTTTCAATGCAAGTTGTGT+TGG + Chr2:11860547-11860566 None:intergenic 30.0%
!!! AAGGATTGTGGTTTTGTATT+GGG + Chr2:11860064-11860083 None:intergenic 30.0%
!!! CAATCTTTTGGTGTTTGATT+TGG - Chr2:11861185-11861204 MsG0280007201.01.T01:intron 30.0%
!!! GATTAAGGAGTATTTTATGC+TGG + Chr2:11863470-11863489 None:intergenic 30.0%
AAACAAAGAGAGAATTTGGG+TGG + Chr2:11860577-11860596 None:intergenic 35.0%
AAGAACCGAACCAAACTAAT+CGG + Chr2:11863754-11863773 None:intergenic 35.0%
AGATAGAAGACTAAAGAGAG+TGG - Chr2:11865347-11865366 MsG0280007201.01.T01:CDS 35.0%
AGGAATATTGAATTGAGAGG+TGG - Chr2:11862664-11862683 MsG0280007201.01.T01:intron 35.0%
ATAGGAAGAATGAAGGATTG+TGG + Chr2:11860076-11860095 None:intergenic 35.0%
ATCATCAATGGAAGTAGTAC+TGG - Chr2:11864156-11864175 MsG0280007201.01.T01:intron 35.0%
ATGGAAGTCTATCAATGTCA+AGG + Chr2:11860438-11860457 None:intergenic 35.0%
ATTGACAAAAAGGGAAATGG+TGG - Chr2:11865237-11865256 MsG0280007201.01.T01:CDS 35.0%
ATTGTCAATCCTGTTTCAAC+AGG - Chr2:11865111-11865130 MsG0280007201.01.T01:CDS 35.0%
CACACAAAATTTAGAGGTGA+GGG - Chr2:11864020-11864039 MsG0280007201.01.T01:intron 35.0%
CATTGTGAATGAAGAGATGT+GGG + Chr2:11864383-11864402 None:intergenic 35.0%
GAACTTTGCAATTCAGTGAA+AGG + Chr2:11860871-11860890 None:intergenic 35.0%
GAATGTCACAATCATACCAA+AGG + Chr2:11864618-11864637 None:intergenic 35.0%
GACTTACAAGAGAGTTGAAA+CGG - Chr2:11862909-11862928 MsG0280007201.01.T01:intron 35.0%
GAGTCAAAACATGCCTTAAA+TGG + Chr2:11865384-11865403 None:intergenic 35.0%
GAGTCAAAACATGCTTCAAA+TGG + Chr2:11860970-11860989 None:intergenic 35.0%
GATAAGCAACCAGATTGTAT+TGG - Chr2:11863898-11863917 MsG0280007201.01.T01:intron 35.0%
GATCTAATTTGAATCTGAGC+AGG - Chr2:11862629-11862648 MsG0280007201.01.T01:intron 35.0%
GATGTGGGAAATAGTATTGT+TGG + Chr2:11864368-11864387 None:intergenic 35.0%
GCAGTTCACACAAAATTTAG+AGG - Chr2:11864014-11864033 MsG0280007201.01.T01:intron 35.0%
GCCTATAAAAAACCAAGACT+GGG - Chr2:11863874-11863893 MsG0280007201.01.T01:intron 35.0%
GGCTTACCAAAAAACACAAA+AGG - Chr2:11860487-11860506 MsG0280007201.01.T01:CDS 35.0%
GTATTAGTATGTATACCCAC+TGG - Chr2:11861312-11861331 MsG0280007201.01.T01:intron 35.0%
TATTCGTGATTTCCTCAAGA+AGG - Chr2:11860906-11860925 MsG0280007201.01.T01:CDS 35.0%
TATTGATGTCAAAGAGGTGA+AGG - Chr2:11860759-11860778 MsG0280007201.01.T01:CDS 35.0%
TCACACAAAATTTAGAGGTG+AGG - Chr2:11864019-11864038 MsG0280007201.01.T01:intron 35.0%
TCATATGATTCACCACTCAA+CGG - Chr2:11864880-11864899 MsG0280007201.01.T01:CDS 35.0%
TCCTACATTCCAATTGAATG+TGG - Chr2:11864652-11864671 MsG0280007201.01.T01:CDS 35.0%
TGAGGAACTAAAGCTCAATT+TGG + Chr2:11865631-11865650 None:intergenic 35.0%
TGCAAGACCAATAATTCCTT+TGG + Chr2:11864920-11864939 None:intergenic 35.0%
TGCATTGTGAATCAAAAGTG+AGG + Chr2:11861235-11861254 None:intergenic 35.0%
TGGTGTGGTTTGAAGAAATT+TGG + Chr2:11865088-11865107 None:intergenic 35.0%
TGTTCAGATGTTGCATGTAT+TGG - Chr2:11860262-11860281 MsG0280007201.01.T01:CDS 35.0%
TTAGCATCAGTTCAGTTCAT+CGG + Chr2:11863379-11863398 None:intergenic 35.0%
TTCTACTCATCAATTGGCAT+AGG - Chr2:11864544-11864563 MsG0280007201.01.T01:CDS 35.0%
TTCTTTATGGGAAGGATGAA+GGG + Chr2:11864505-11864524 None:intergenic 35.0%
TTTAGGAACAACTTGCATTG+TGG + Chr2:11861248-11861267 None:intergenic 35.0%
! AACTTGTTTGTTCGATCAGT+TGG - Chr2:11865039-11865058 MsG0280007201.01.T01:CDS 35.0%
! ATCAACCAAACCGATTAGTT+TGG - Chr2:11863741-11863760 MsG0280007201.01.T01:intron 35.0%
! GAGTAGAATAGATTGGTTGA+TGG + Chr2:11864532-11864551 None:intergenic 35.0%
! GCTTTTGTAAACGACATTCT+TGG + Chr2:11865546-11865565 None:intergenic 35.0%
! GTGTAGAATAGATTGGTTGA+TGG + Chr2:11860109-11860128 None:intergenic 35.0%
! TACTTTTATATTGTCCCTCG+TGG - Chr2:11863244-11863263 MsG0280007201.01.T01:intron 35.0%
! TATTACCTTTTATGGAGCAG+AGG + Chr2:11861528-11861547 None:intergenic 35.0%
! TCAATTGGAGGACAATCTTT+TGG - Chr2:11861173-11861192 MsG0280007201.01.T01:intron 35.0%
! TGTTATTGGTGGACATCAAT+TGG - Chr2:11861158-11861177 MsG0280007201.01.T01:CDS 35.0%
!! GAAAGAAAGTGAACGGATTA+AGG + Chr2:11863485-11863504 None:intergenic 35.0%
!! GGTGATGGAGCATATTATTT+AGG + Chr2:11864294-11864313 None:intergenic 35.0%
!! GTTGCATGTATTGGTTGTAA+TGG - Chr2:11860271-11860290 MsG0280007201.01.T01:CDS 35.0%
!! TATGCTGGGCTTTAACTTTT+GGG + Chr2:11863455-11863474 None:intergenic 35.0%
!! TTATGCTGGGCTTTAACTTT+TGG + Chr2:11863456-11863475 None:intergenic 35.0%
!! TTTCCCGCTTTTATAACCAA+CGG + Chr2:11862181-11862200 None:intergenic 35.0%
!! TTTGGTTCGGTTTGAATGTT+CGG + Chr2:11863294-11863313 None:intergenic 35.0%
!! TTTTTCAATGCAAGCTGAGT+TGG + Chr2:11864961-11864980 None:intergenic 35.0%
!!! AAGGGGTGTGGTTTTTTATT+GGG + Chr2:11864487-11864506 None:intergenic 35.0%
!!! ACCCAGTCTTGGTTTTTTAT+AGG + Chr2:11863878-11863897 None:intergenic 35.0%
!!! GAAGGATTGTGGTTTTGTAT+TGG + Chr2:11860065-11860084 None:intergenic 35.0%
!!! GTTGATGGGTCTTTTTTGAT+AGG + Chr2:11860094-11860113 None:intergenic 35.0%
!!! TGGTTTTTTATAGGCGAGTA+GGG + Chr2:11863869-11863888 None:intergenic 35.0%
!!! TTGGTTTTTTATAGGCGAGT+AGG + Chr2:11863870-11863889 None:intergenic 35.0%
!!! TTTTTCGAGCCACATTCAAT+TGG + Chr2:11864664-11864683 None:intergenic 35.0%
!!! TTTTTTGGTAAGCCATTGAG+TGG + Chr2:11860481-11860500 None:intergenic 35.0%
AACCTAGTCATTGATCTTGC+TGG - Chr2:11864586-11864605 MsG0280007201.01.T01:CDS 40.0%
AAGATAGCACCTGTTGAAAC+AGG + Chr2:11865123-11865142 None:intergenic 40.0%
AATCTAGCCATTGATCTTGC+TGG - Chr2:11860163-11860182 MsG0280007201.01.T01:CDS 40.0%
ACAATGCATGAAAAGGGTCA+CGG + Chr2:11865065-11865084 None:intergenic 40.0%
ACTAAAGAGAGTGGAATCTG+TGG - Chr2:11865356-11865375 MsG0280007201.01.T01:CDS 40.0%
AGAAAAGCAATAGTGAGAGG+AGG + Chr2:11864435-11864454 None:intergenic 40.0%
AGAGGAGGAAGAAATGAATG+AGG + Chr2:11864420-11864439 None:intergenic 40.0%
AGAGTTGACCTTGTTCTTCA+AGG - Chr2:11861015-11861034 MsG0280007201.01.T01:CDS 40.0%
AGTTGATCTTGTGCTTCAAG+GGG - Chr2:11865431-11865450 MsG0280007201.01.T01:CDS 40.0%
ATAGTGAGAGGAGGAAGAAA+TGG + Chr2:11860003-11860022 None:intergenic 40.0%
ATCAAGAACTGAACCAGACA+AGG + Chr2:11863333-11863352 None:intergenic 40.0%
ATCTTGCTGGAGAGAACTTA+TGG - Chr2:11860176-11860195 MsG0280007201.01.T01:CDS 40.0%
ATCTTGCTGGAGATAACCTT+TGG - Chr2:11864599-11864618 MsG0280007201.01.T01:CDS 40.0%
ATTGTCAATCCCGTTTCAAC+CGG - Chr2:11860697-11860716 MsG0280007201.01.T01:CDS 40.0%
CAATTCAGTGAAAGGACTCA+TGG + Chr2:11865277-11865296 None:intergenic 40.0%
CATGTATTGTTTGTGCAACC+TGG + Chr2:11860307-11860326 None:intergenic 40.0%
CCACATCTCTTCATTCACAA+TGG - Chr2:11864381-11864400 MsG0280007201.01.T01:intron 40.0%
CCATTGTGAATGAAGAGATG+TGG + Chr2:11864384-11864403 None:intergenic 40.0%
CGCCTATAAAAAACCAAGAC+TGG - Chr2:11863873-11863892 MsG0280007201.01.T01:intron 40.0%
CTTCATCCTTCCCATAAAGA+AGG - Chr2:11864504-11864523 MsG0280007201.01.T01:CDS 40.0%
CTTCTTTATGGGAAGGATGA+AGG + Chr2:11864506-11864525 None:intergenic 40.0%
GAAACAGGATTGACAATGAG+TGG + Chr2:11865108-11865127 None:intergenic 40.0%
GAACCGTAAGTCAACTACAA+TGG - Chr2:11862510-11862529 MsG0280007201.01.T01:intron 40.0%
GAAGAACAAGGTCAACTCTT+GGG + Chr2:11861014-11861033 None:intergenic 40.0%
GATAGACTTCCATCATTCAC+TGG - Chr2:11860445-11860464 MsG0280007201.01.T01:CDS 40.0%
GCATGTCTTGGAATTGTTGA+TGG - Chr2:11861096-11861115 MsG0280007201.01.T01:CDS 40.0%
GCCACATTCAATTGGAATGT+AGG + Chr2:11864656-11864675 None:intergenic 40.0%
GCCACCACCAAAAATGAATT+TGG + Chr2:11860356-11860375 None:intergenic 40.0%
GCCACCACTGAAAATGAAAT+TGG + Chr2:11864779-11864798 None:intergenic 40.0%
GGAACTAAAGCTCAATTTGG+AGG + Chr2:11865628-11865647 None:intergenic 40.0%
GGCTTACCAAAAAACACCAA+AGG - Chr2:11864901-11864920 MsG0280007201.01.T01:CDS 40.0%
GTGAAAGCGGTTAAGATTGA+TGG - Chr2:11865180-11865199 MsG0280007201.01.T01:CDS 40.0%
GTGAGAAAAGCAATAGTGAG+AGG + Chr2:11864438-11864457 None:intergenic 40.0%
TACATCCTCTGCTCCATAAA+AGG - Chr2:11861520-11861539 MsG0280007201.01.T01:intron 40.0%
TCTTTATGGGAAGGATGAAG+GGG + Chr2:11864504-11864523 None:intergenic 40.0%
TGAAGAACAAGGTCAACTCT+TGG + Chr2:11861015-11861034 None:intergenic 40.0%
TGAAGCACAAGATCAACTCT+TGG + Chr2:11865429-11865448 None:intergenic 40.0%
TGAGGAACTGAAGCTCAATT+TGG + Chr2:11861217-11861236 None:intergenic 40.0%
TGGTTACGAGTTGCTTCATA+CGG + Chr2:11862571-11862590 None:intergenic 40.0%
TGTAATGGTCCATTCAAACC+AGG - Chr2:11860286-11860305 MsG0280007201.01.T01:CDS 40.0%
TTCTACACATCAGTTGGCAT+AGG - Chr2:11860121-11860140 MsG0280007201.01.T01:CDS 40.0%
TTGTTGGTGTGCTTAGTTCA+AGG + Chr2:11864352-11864371 None:intergenic 40.0%
! AACAGGTGCTATCTTTGTTC+GGG - Chr2:11865128-11865147 MsG0280007201.01.T01:CDS 40.0%
! AACTTGCTTGCTGGATCAAT+TGG - Chr2:11860625-11860644 MsG0280007201.01.T01:CDS 40.0%
! ACTAAAGAGAGTGCAATCAG+TGG - Chr2:11860942-11860961 MsG0280007201.01.T01:CDS 40.0%
! AGAGTTGATCTTGTGCTTCA+AGG - Chr2:11865429-11865448 MsG0280007201.01.T01:CDS 40.0%
! ATCCCGTTGGTTATAAAAGC+GGG - Chr2:11862175-11862194 MsG0280007201.01.T01:intron 40.0%
! CAACAGGTGCTATCTTTGTT+CGG - Chr2:11865127-11865146 MsG0280007201.01.T01:CDS 40.0%
! CATCCCGTTGGTTATAAAAG+CGG - Chr2:11862174-11862193 MsG0280007201.01.T01:intron 40.0%
! GAGTTGATCTTGTGCTTCAA+GGG - Chr2:11865430-11865449 MsG0280007201.01.T01:CDS 40.0%
! GCATGTTTGGCATTTGTTGA+TGG - Chr2:11865510-11865529 MsG0280007201.01.T01:CDS 40.0%
! GCCAATTTCATTTTCAGTGG+TGG - Chr2:11864775-11864794 MsG0280007201.01.T01:CDS 40.0%
! GTCTTGGAATTGTTGATGGA+GGG - Chr2:11861100-11861119 MsG0280007201.01.T01:CDS 40.0%
! GTTGATGGGTCCTTCTTTAT+GGG + Chr2:11864517-11864536 None:intergenic 40.0%
! TATTGGTGGACATCAATTGG+AGG - Chr2:11861161-11861180 MsG0280007201.01.T01:CDS 40.0%
! TGTCTTGGAATTGTTGATGG+AGG - Chr2:11861099-11861118 MsG0280007201.01.T01:CDS 40.0%
! TGTTTGGCATTTGTTGATGG+AGG - Chr2:11865513-11865532 MsG0280007201.01.T01:CDS 40.0%
! TTCTATCTGAAGCCTTCTTG+AGG + Chr2:11860921-11860940 None:intergenic 40.0%
! TTGAAACGGAAGTGCACAAA+AGG - Chr2:11862923-11862942 MsG0280007201.01.T01:intron 40.0%
! TTTGTGCAACCTGGTTTGAA+GGG + Chr2:11860298-11860317 None:intergenic 40.0%
! TTTGTGCAACCTGGTTTGAA+TGG + Chr2:11860298-11860317 None:intergenic 40.0%
! TTTTATATTGTCCCTCGTGG+CGG - Chr2:11863247-11863266 MsG0280007201.01.T01:intron 40.0%
! TTTTCTGAGCCACATGCAAT+TGG + Chr2:11860241-11860260 None:intergenic 40.0%
!! AATGAGTTTGTTGCAGTTGC+TGG + Chr2:11860331-11860350 None:intergenic 40.0%
!! CAAGCTGAGTTGGTAATGAA+AGG + Chr2:11864951-11864970 None:intergenic 40.0%
!! CAAGTTGTGTTGGTAGTGAA+AGG + Chr2:11860537-11860556 None:intergenic 40.0%
!! CCAAACCGATTAGTTTGGTT+CGG - Chr2:11863746-11863765 MsG0280007201.01.T01:intron 40.0%
!! GAGCTTTAGTTCCTCACTTT+TGG - Chr2:11865635-11865654 MsG0280007201.01.T01:CDS 40.0%
!! TTCCCGCTTTTATAACCAAC+GGG + Chr2:11862180-11862199 None:intergenic 40.0%
!!! AATTGGTGGTGACCCTTTTA+AGG - Chr2:11860642-11860661 MsG0280007201.01.T01:CDS 40.0%
!!! GAAGGGGTGTGGTTTTTTAT+TGG + Chr2:11864488-11864507 None:intergenic 40.0%
!!! GATTGTGGTTTTGTATTGGG+AGG + Chr2:11860061-11860080 None:intergenic 40.0%
!!! GCCAAATTCATTTTTGGTGG+TGG - Chr2:11860352-11860371 MsG0280007201.01.T01:CDS 40.0%
!!! GGTTTTTTATAGGCGAGTAG+GGG + Chr2:11863868-11863887 None:intergenic 40.0%
!!! TTTTTTGGTAAGCCGTTGAG+TGG + Chr2:11864895-11864914 None:intergenic 40.0%
AAATTAGGTACGTGCATGCG+TGG - Chr2:11862455-11862474 MsG0280007201.01.T01:intron 45.0%
AACTAACCAAGGGGTGATTG+AGG + Chr2:11863564-11863583 None:intergenic 45.0%
ACTTCCATCATTCACTGGAG+AGG - Chr2:11860450-11860469 MsG0280007201.01.T01:CDS 45.0%
AGAAAAGGGATAGTGAGAGG+AGG + Chr2:11860012-11860031 None:intergenic 45.0%
AGGATTGACAATGAGTGGTG+TGG + Chr2:11865103-11865122 None:intergenic 45.0%
ATGGGTCCTTCTTTATGGGA+AGG + Chr2:11864513-11864532 None:intergenic 45.0%
CCGAACCAAACTAATCGGTT+TGG + Chr2:11863749-11863768 None:intergenic 45.0%
CCTAATGTGGTCTGCTAAGT+AGG - Chr2:11864078-11864097 MsG0280007201.01.T01:intron 45.0%
CCTACTTAGCAGACCACATT+AGG + Chr2:11864081-11864100 None:intergenic 45.0%
CGTTGTCTTTGTCATACAGC+TGG + Chr2:11862591-11862610 None:intergenic 45.0%
CTCCAGCAAGATCAATGACT+AGG + Chr2:11864591-11864610 None:intergenic 45.0%
GAATCCTCTCCAGTGAATGA+TGG + Chr2:11860457-11860476 None:intergenic 45.0%
GGAATCTGTGGCACCATTTA+AGG - Chr2:11865368-11865387 MsG0280007201.01.T01:CDS 45.0%
GTCAAAGAGGTGAAGGTTGA+TGG - Chr2:11860766-11860785 MsG0280007201.01.T01:CDS 45.0%
GTGAGAAAAGGGATAGTGAG+AGG + Chr2:11860015-11860034 None:intergenic 45.0%
GTGCTTAGTTCAAGGAGTTG+AGG + Chr2:11864344-11864363 None:intergenic 45.0%
GTTCTCTCCAGCAAGATCAA+TGG + Chr2:11860173-11860192 None:intergenic 45.0%
GTTGACCTTGTTCTTCAAGG+TGG - Chr2:11861018-11861037 MsG0280007201.01.T01:CDS 45.0%
GTTGATCTTGTGCTTCAAGG+GGG - Chr2:11865432-11865451 MsG0280007201.01.T01:CDS 45.0%
TACGTGCATGCGTGGAATAT+TGG - Chr2:11862463-11862482 MsG0280007201.01.T01:intron 45.0%
TCATAGCTTATCCATCCCGT+TGG - Chr2:11862162-11862181 MsG0280007201.01.T01:intron 45.0%
TCCTACGTTCCAATTGCATG+TGG - Chr2:11860229-11860248 MsG0280007201.01.T01:CDS 45.0%
TGCATTGTGGACCAAAAGTG+AGG + Chr2:11865649-11865668 None:intergenic 45.0%
TTCTTCAAGGTGGAGTGCAA+TGG - Chr2:11861028-11861047 MsG0280007201.01.T01:CDS 45.0%
TTGAATTGAGAGGTGGCATG+TGG - Chr2:11862671-11862690 MsG0280007201.01.T01:intron 45.0%
! ACAGGTGCTATCTTTGTTCG+GGG - Chr2:11865129-11865148 MsG0280007201.01.T01:CDS 45.0%
! CGCTTTTATAACCAACGGGA+TGG + Chr2:11862176-11862195 None:intergenic 45.0%
! GTTTGTGCAACCTGGTTTGA+AGG + Chr2:11860299-11860318 None:intergenic 45.0%
! TCCAGTTGTATTGACACCGA+TGG - Chr2:11864850-11864869 MsG0280007201.01.T01:CDS 45.0%
! TTCATTTTCAGTGGTGGCCT+TGG - Chr2:11864781-11864800 MsG0280007201.01.T01:CDS 45.0%
! TTGCTTGCTGGATCAATTGG+TGG - Chr2:11860628-11860647 MsG0280007201.01.T01:CDS 45.0%
! TTGTGCAACCTGGTTTGAAG+GGG + Chr2:11864720-11864739 None:intergenic 45.0%
!! AGAAACTGCACCGGTTGAAA+CGG + Chr2:11860710-11860729 None:intergenic 45.0%
!! CATGTGTTGTTTGTGCAACC+TGG + Chr2:11864730-11864749 None:intergenic 45.0%
!! GGATTCACTAACTTGCTTGC+TGG - Chr2:11860616-11860635 MsG0280007201.01.T01:CDS 45.0%
!! GGTTGATGGGTCCTTCTTTA+TGG + Chr2:11864518-11864537 None:intergenic 45.0%
!! TCCATCGGTGTCAATACAAC+TGG + Chr2:11864854-11864873 None:intergenic 45.0%
!!! TTCATTTTTGGTGGTGGCCT+TGG - Chr2:11860358-11860377 MsG0280007201.01.T01:CDS 45.0%
!! TTTATAGATAAAATAAAATA+AGG + Chr2:11864315-11864334 None:intergenic 5.0%
!!! ACAATTTTTTTTTTTTTTTA+CGG - Chr2:11862401-11862420 MsG0280007201.01.T01:intron 5.0%
!!! TTAATTAAAAGTTTTATTAT+TGG + Chr2:11861763-11861782 None:intergenic 5.0%
AAGGCAACTTGAGAGCAAGC+CGG + Chr2:11860419-11860438 None:intergenic 50.0%
ACCGGTGCAGTTTCTGTTCA+AGG - Chr2:11860715-11860734 MsG0280007201.01.T01:CDS 50.0%
GCACTCCACCTTGAAGAACA+AGG + Chr2:11861026-11861045 None:intergenic 50.0%
GCCACATGCAATTGGAACGT+AGG + Chr2:11860233-11860252 None:intergenic 50.0%
GCCTTGAACAGAAACTGCAC+CGG + Chr2:11860719-11860738 None:intergenic 50.0%
GGAGAGGATTCACCACTCAA+TGG - Chr2:11860466-11860485 MsG0280007201.01.T01:CDS 50.0%
GGTTGCTTATCACCCAGTCT+TGG + Chr2:11863889-11863908 None:intergenic 50.0%
! AGGGGTGTAACAGTTCGGTT+TGG + Chr2:11863850-11863869 None:intergenic 50.0%
! CGAGTAGGGGTGTAACAGTT+CGG + Chr2:11863855-11863874 None:intergenic 50.0%
!! GAAACTGCACCGGTTGAAAC+GGG + Chr2:11860709-11860728 None:intergenic 50.0%
ATGGGAAGGATGAAGGGGTG+TGG + Chr2:11864499-11864518 None:intergenic 55.0%
CCAAGGGGTGATTGAGGCTA+AGG + Chr2:11863558-11863577 None:intergenic 55.0%
CCTTAGCCTCAATCACCCCT+TGG - Chr2:11863555-11863574 MsG0280007201.01.T01:intron 55.0%
GTGGCGGTGTGTAAGTGGTT+CGG - Chr2:11863263-11863282 MsG0280007201.01.T01:intron 55.0%
TGCAATGGCCCCTTCAAACC+AGG - Chr2:11864709-11864728 MsG0280007201.01.T01:CDS 55.0%
ACCACTTACACACCGCCACG+AGG + Chr2:11863262-11863281 None:intergenic 60.0%
CCACTTACACACCGCCACGA+GGG + Chr2:11863261-11863280 None:intergenic 60.0%
TGCTTCAAGGGGGAGAGCAG+TGG - Chr2:11865442-11865461 MsG0280007201.01.T01:CDS 60.0%
CCCTCGTGGCGGTGTGTAAG+TGG - Chr2:11863258-11863277 MsG0280007201.01.T01:intron 65.0%
Chromosome Type Strat End Strand Name
Chr2 gene 11859977 11865680 11859977 ID=MsG0280007201.01;Name=MsG0280007201.01
Chr2 mRNA 11859977 11865680 11859977 ID=MsG0280007201.01.T01;Parent=MsG0280007201.01;Name=MsG0280007201.01.T01;_AED=0.09;_eAED=0.09;_QI=0|0|0|1|1|1|2|0|819
Chr2 exon 11864429 11865680 11864429 ID=MsG0280007201.01.T01:exon:3628;Parent=MsG0280007201.01.T01
Chr2 exon 11859977 11861184 11859977 ID=MsG0280007201.01.T01:exon:3627;Parent=MsG0280007201.01.T01
Chr2 CDS 11864429 11865680 11864429 ID=MsG0280007201.01.T01:cds;Parent=MsG0280007201.01.T01
Chr2 CDS 11859977 11861184 11859977 ID=MsG0280007201.01.T01:cds;Parent=MsG0280007201.01.T01
Gene Sequence

>MsG0280007201.01.T01

ATGGTTTCTTCTTCAGTTATCATCCATTTCTTCCTCCTCTCACTATCCCTTTTCTCACTTTCATGCTTATCAACATCTCAACCTCCCAATACAAAACCACAATCCTTCATTCTTCCTATCAAAAAAGACCCATCAACCAATCTATTCTACACATCAGTTGGCATAGGAACTCCTAGAACAAATTTCAATCTAGCCATTGATCTTGCTGGAGAGAACTTATGGTATGATTGTGACACTCATTACAATTCATCATCCTACGTTCCAATTGCATGTGGCTCAGAAAAATGTTCAGATGTTGCATGTATTGGTTGTAATGGTCCATTCAAACCAGGTTGCACAAACAATACATGTCCAGCAACTGCAACAAACTCATTAGCCAAATTCATTTTTGGTGGTGGCCTTGGTGAAGATTTCATTTTCATTTCGCAACAAAAAGTTTCCGGCTTGCTCTCAAGTTGCCTTGACATTGATAGACTTCCATCATTCACTGGAGAGGATTCACCACTCAATGGCTTACCAAAAAACACAAAAGGAATTATTGGTCTTTCAAGATCAAACCTTTCACTACCAACACAACTTGCATTGAAAAACAAGCTTCCACCCAAATTCTCTCTTTGTTTACCTTCCTCAAATAAACAAGGATTCACTAACTTGCTTGCTGGATCAATTGGTGGTGACCCTTTTAAGGAATTGTCCAAATTTGTTCAAACTACAACGCTCATTGTCAATCCCGTTTCAACCGGTGCAGTTTCTGTTCAAGGCGTTCCTTCAGTTGAATATTTTATTGATGTCAAAGAGGTGAAGGTTGATGGAAATGTTTTGAACTTAAAGCCTTCTTTGTTGTCTATAGACAAAAAAGGAAATGGTGGCACCAAAATTAGTACCATAATTCCTTTCACTGAATTGCAAAGTTCTGTGTACAAACCATTTATTCGTGATTTCCTCAAGAAGGCTTCAGATAGAAAACTAAAGAGAGTGCAATCAGTGGCACCATTTGAAGCATGTTTTGACTCATCTAGCATTAAAAATTCTGTCCCAAGAGTTGACCTTGTTCTTCAAGGTGGAGTGCAATGGACTATTCATGAAGCCAATTTGATGGTTAGTGTAAAGAAAAATGTAGCATGTCTTGGAATTGTTGATGGAGGGACAGAGCCAAGAATGTCATTTACAAAAGCATCAATTGTTATTGGTGGACATCAATTGGAGGACAATCTTTTGGTGTTTGATTTGGCTTCTTCCAAATTGAGCTTCACATCTCAAACTCCCAATAAAAAACCACACCCCTTCATCCTTCCCATAAAGAAGGACCCATCAACCAATCTATTCTACTCATCAATTGGCATAGGAACTCCTAGAAAAAATTTCAACCTAGTCATTGATCTTGCTGGAGATAACCTTTGGTATGATTGTGACATTCACTACAATTCATCATCCTACATTCCAATTGAATGTGGCTCGAAAAAATGTCCAGATATTACATGTATTGGTTGCAATGGCCCCTTCAAACCAGGTTGCACAAACAACACATGCGCTAGTTATATAATCAACCCATTTGCCAATTTCATTTTCAGTGGTGGCCTTGGTGAAGATATCATATTTGTTAATCAACAAAAAGTTTCTGGCTTGCTTTCCAGTTGTATTGACACCGATGGATTTTCATCATATGATTCACCACTCAACGGCTTACCAAAAAACACCAAAGGAATTATTGGTCTTGCAAGATCAAACCTTTCATTACCAACTCAGCTTGCATTGAAAAACAAGCTTCCACACAAATTCTCTCTTTGTTTACCTTCTTCAAACAAACAAGGATTCGCTAACTTGTTTGTTCGATCAGTTGGCCGTGACCCTTTTCATGCATTGTCCAAATTTCTTCAAACCACACCACTCATTGTCAATCCTGTTTCAACAGGTGCTATCTTTGTTCGGGGTGTTCCTTCAAATGAATATTTTATTGATGTGAAAGCGGTTAAGATTGATGGACATGTTTTGAACTTAAAGCCCTCTTTGTTGTCTATTGACAAAAAGGGAAATGGTGGAACTAAACTTAGTACCATGAGTCCTTTCACTGAATTGAAAAATTCTGTGTATATGCCATTTATTCGTGATTTCCTCAAGAAGGCTTCAGATAGAAGACTAAAGAGAGTGGAATCTGTGGCACCATTTAAGGCATGTTTTGACTCTACAAGCTTTGAAAATTCTGTACCAAGAGTTGATCTTGTGCTTCAAGGGGGAGAGCAGTGGACTATTCATGAAAGCAATTTGATGGTTATGGTGAAGAAAAATGTAGCATGTTTGGCATTTGTTGATGGAGGAAAAGAGCCAAGAATGTCGTTTACAAAAGCTTCAATTGTTATTGGTGGACATCAATTGGAAGACAATCTTTTGGTGTTTGATCAAACTTCCTCCAAATTGAGCTTTAGTTCCTCACTTTTGGTCCACAATGCAAGTTGTTCCTAA

Protein sequence

>MsG0280007201.01.T01

MVSSSVIIHFFLLSLSLFSLSCLSTSQPPNTKPQSFILPIKKDPSTNLFYTSVGIGTPRTNFNLAIDLAGENLWYDCDTHYNSSSYVPIACGSEKCSDVACIGCNGPFKPGCTNNTCPATATNSLAKFIFGGGLGEDFIFISQQKVSGLLSSCLDIDRLPSFTGEDSPLNGLPKNTKGIIGLSRSNLSLPTQLALKNKLPPKFSLCLPSSNKQGFTNLLAGSIGGDPFKELSKFVQTTTLIVNPVSTGAVSVQGVPSVEYFIDVKEVKVDGNVLNLKPSLLSIDKKGNGGTKISTIIPFTELQSSVYKPFIRDFLKKASDRKLKRVQSVAPFEACFDSSSIKNSVPRVDLVLQGGVQWTIHEANLMVSVKKNVACLGIVDGGTEPRMSFTKASIVIGGHQLEDNLLVFDLASSKLSFTSQTPNKKPHPFILPIKKDPSTNLFYSSIGIGTPRKNFNLVIDLAGDNLWYDCDIHYNSSSYIPIECGSKKCPDITCIGCNGPFKPGCTNNTCASYIINPFANFIFSGGLGEDIIFVNQQKVSGLLSSCIDTDGFSSYDSPLNGLPKNTKGIIGLARSNLSLPTQLALKNKLPHKFSLCLPSSNKQGFANLFVRSVGRDPFHALSKFLQTTPLIVNPVSTGAIFVRGVPSNEYFIDVKAVKIDGHVLNLKPSLLSIDKKGNGGTKLSTMSPFTELKNSVYMPFIRDFLKKASDRRLKRVESVAPFKACFDSTSFENSVPRVDLVLQGGEQWTIHESNLMVMVKKNVACLAFVDGGKEPRMSFTKASIVIGGHQLEDNLLVFDQTSSKLSFSSSLLVHNASCS*