AlfalfaGEDB | MsG0580025592.01

M. sativa cultivar ZhongmuNo.1 / MsG0580025592.01

KEGG: -
GO: GO:0030246
PFAM: PF00139

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580025592.01.T01	XP_003612969.1	92.276	246	19	0	2	247	41	286	3.73E-164	465

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580025592.01.T01	Q2PP74	77.778	243	53	1	6	247	37	279	1.01E-138	393

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580025592.01.T01	A9YWS6	92.276	246	19	0	2	247	41	286	1.78e-164	465

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI

Gene1	Gene2	Type
MsG0580025592.01	MsG0180005082.01	PPI
MsG0580025592.01	MsG0880045214.01	PPI
MsG0580025591.01	MsG0580025592.01	PPI
MsG0180005059.01	MsG0580025592.01	PPI
MsG0380013594.01	MsG0580025592.01	PPI
MsG0880042846.01	MsG0580025592.01	PPI
MsG0580025592.01	MsG0380013593.01	PPI
MsG0580025592.01	MsG0880045217.01	PPI
MsG0180005082.01	MsG0580025592.01	PPI
MsG0380013595.01	MsG0580025592.01	PPI
MsG0180004091.01	MsG0580025592.01	PPI
MsG0880045216.01	MsG0580025592.01	PPI
MsG0580025592.01	MsG0180004091.01	PPI
MsG0580025592.01	MsG0180005059.01	PPI
MsG0580025592.01	MsG0180004091.01	PPI
MsG0180004091.01	MsG0580025592.01	PPI
MsG0380014748.01	MsG0580025592.01	PPI
MsG0380014272.01	MsG0580025592.01	PPI
MsG0380014275.01	MsG0580025592.01	PPI
MsG0580025592.01	MsG0180005080.01	PPI
MsG0580025592.01	MsG0380014275.01	PPI
MsG0580025592.01	MsG0380014744.01	PPI
MsG0180005060.01	MsG0580025592.01	PPI
MsG0180004091.01	MsG0580025592.01	PPI
MsG0580025592.01	MsG0880045216.01	PPI
MsG0580025592.01	MsG0580025598.01	PPI
MsG0180004091.01	MsG0580025592.01	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580025592.01.T01	MTR_5g031140	92.276	246	19	0	2	247	41	286	4.52e-168	465
MsG0580025592.01.T01	MTR_5g031120	77.366	243	54	1	6	247	37	279	1.42e-139	393
MsG0580025592.01.T01	MTR_5g031100	75.309	243	58	2	6	247	37	278	8.88e-134	378
MsG0580025592.01.T01	MTR_5g031160	74.089	247	63	1	2	247	41	287	4.08e-131	372
MsG0580025592.01.T01	MTR_5g031030	50.820	244	114	3	6	247	35	274	1.22e-76	233
MsG0580025592.01.T01	MTR_5g031090	48.361	244	124	2	6	247	32	275	1.59e-74	228
MsG0580025592.01.T01	MTR_8g068040	44.444	252	124	5	1	247	21	261	1.55e-65	204
MsG0580025592.01.T01	MTR_8g068030	43.750	256	124	5	1	247	21	265	1.92e-63	199
MsG0580025592.01.T01	MTR_8g068050	43.496	246	131	4	4	247	34	273	2.23e-62	207
MsG0580025592.01.T01	MTR_8g067980	47.639	233	107	9	18	246	37	258	5.60e-56	180
MsG0580025592.01.T01	MTR_8g067940	43.860	228	118	6	27	247	57	281	1.83e-55	179
MsG0580025592.01.T01	MTR_8g067990	45.852	229	113	7	19	245	38	257	2.39e-53	173
MsG0580025592.01.T01	MTR_8g023510	37.500	240	134	7	9	247	35	259	2.74e-43	148
MsG0580025592.01.T01	MTR_4g093080	36.066	244	141	4	7	247	28	259	4.43e-43	155
MsG0580025592.01.T01	MTR_0684s0020	39.004	241	129	8	8	247	36	259	3.82e-41	142
MsG0580025592.01.T01	MTR_0163s0020	39.004	241	129	8	8	247	37	260	4.50e-41	142
MsG0580025592.01.T01	MTR_8g067690	35.246	244	148	4	6	247	59	294	6.34e-41	149
MsG0580025592.01.T01	MTR_8g067960	38.793	232	130	8	18	247	20	241	1.20e-39	137
MsG0580025592.01.T01	MTR_8g067735	35.081	248	148	6	4	247	40	278	2.62e-38	141
MsG0580025592.01.T01	MTR_4g023810	36.515	241	131	9	9	247	34	254	1.03e-37	133
MsG0580025592.01.T01	MTR_8g067930	34.553	246	146	7	7	247	24	259	3.87e-37	138
MsG0580025592.01.T01	MTR_7g115740	38.627	233	128	7	21	247	37	260	1.23e-36	137
MsG0580025592.01.T01	MTR_1g090973	38.400	250	133	11	1	247	29	260	1.29e-36	130
MsG0580025592.01.T01	MTR_4g093110	34.649	228	132	6	24	247	50	264	3.07e-36	135
MsG0580025592.01.T01	MTR_4g093140	35.088	228	131	6	24	247	50	264	3.72e-36	135
MsG0580025592.01.T01	MTR_8g067720	33.603	247	151	6	4	247	21	257	8.55e-36	134
MsG0580025592.01.T01	MTR_1g014240	34.263	251	145	6	6	247	36	275	1.56e-35	134
MsG0580025592.01.T01	MTR_8g067630	33.766	231	140	7	4	231	27	247	2.55e-35	132
MsG0580025592.01.T01	MTR_7g116130	37.339	233	130	8	21	247	39	261	5.15e-35	132
MsG0580025592.01.T01	MTR_3g054170	33.603	247	139	8	5	247	29	254	3.01e-34	124
MsG0580025592.01.T01	MTR_3g047140	36.800	250	138	9	1	247	29	261	2.47e-33	122
MsG0580025592.01.T01	MTR_4g093040	37.447	235	136	8	6	236	32	259	1.01e-32	125
MsG0580025592.01.T01	MTR_3g054180	33.858	254	139	9	1	247	29	260	1.37e-31	117
MsG0580025592.01.T01	MTR_3g054200	32.245	245	145	7	5	247	29	254	3.33e-31	116
MsG0580025592.01.T01	MTR_4g093070	32.301	226	138	5	26	247	52	266	4.11e-29	115
MsG0580025592.01.T01	MTR_1g090943	33.466	251	136	11	5	247	33	260	1.14e-28	110
MsG0580025592.01.T01	MTR_3g463370	40.994	161	84	5	91	247	69	222	2.45e-28	108
MsG0580025592.01.T01	MTR_3g027280	34.387	253	136	13	6	246	31	265	2.26e-27	106
MsG0580025592.01.T01	MTR_4g093040	38.674	181	103	6	60	236	1	177	7.24e-27	108
MsG0580025592.01.T01	MTR_4g093050	32.627	236	144	9	17	246	39	265	1.11e-24	102
MsG0580025592.01.T01	MTR_1g090960	30.588	255	116	7	1	247	29	230	8.88e-24	96.3
MsG0580025592.01.T01	MTR_1g090930	33.624	229	132	9	20	246	52	262	2.27e-22	93.6
MsG0580025592.01.T01	MTR_1g090957	32.143	252	131	13	6	246	31	253	1.22e-21	91.3
MsG0580025592.01.T01	MTR_1g090937	32.159	227	132	9	22	246	52	258	1.52e-21	90.9
MsG0580025592.01.T01	MTR_8g068050	40.708	113	66	1	4	116	34	145	2.26e-21	93.2
MsG0580025592.01.T01	MTR_7g115740	41.600	125	68	4	21	143	37	158	4.96e-20	89.0
MsG0580025592.01.T01	MTR_5g025020	31.250	208	127	7	46	243	82	283	5.83e-19	86.3
MsG0580025592.01.T01	MTR_7g063030	31.224	237	137	9	21	244	32	255	2.80e-15	75.1
MsG0580025592.01.T01	MTR_7g063030	31.224	237	137	9	21	244	38	261	3.21e-15	75.1
MsG0580025592.01.T01	MTR_7g062940	27.843	255	155	11	4	244	17	256	7.28e-15	73.9
MsG0580025592.01.T01	MTR_5g068770	30.833	240	142	10	21	246	49	278	3.07e-14	72.0
MsG0580025592.01.T01	MTR_1g099260	29.832	238	138	10	21	245	28	249	9.53e-14	70.9
MsG0580025592.01.T01	MTR_3g068025	30.522	249	140	8	15	244	34	268	4.53e-13	68.9
MsG0580025592.01.T01	MTR_2g013720	28.926	242	142	9	21	246	38	265	1.49e-12	67.4
MsG0580025592.01.T01	MTR_5g035910	28.926	242	138	10	21	244	39	264	6.37e-11	62.4

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580025592.01.T01	AT5G10530	32.520	246	151	8	7	247	19	254	2.60e-31	121
MsG0580025592.01.T01	AT5G65600	31.933	238	146	8	6	236	34	262	1.61e-26	108
MsG0580025592.01.T01	AT5G55830	32.806	253	144	12	6	246	29	267	8.28e-20	88.6
MsG0580025592.01.T01	AT4G29050	31.579	228	129	10	31	244	59	273	3.06e-18	84.0
MsG0580025592.01.T01	AT4G29050	31.579	228	129	10	31	244	45	259	3.25e-18	84.0
MsG0580025592.01.T01	AT3G53810	30.859	256	144	12	6	244	23	262	1.01e-17	82.4
MsG0580025592.01.T01	AT2G37710	28.750	240	144	12	19	243	34	261	2.45e-15	75.5
MsG0580025592.01.T01	AT4G02420	30.651	261	144	10	1	243	19	260	2.61e-15	75.5
MsG0580025592.01.T01	AT5G06740	26.496	234	160	7	15	244	32	257	1.42e-14	73.2
MsG0580025592.01.T01	AT5G06740	26.496	234	160	7	15	244	44	269	1.51e-14	73.2
MsG0580025592.01.T01	AT4G02410	27.734	256	160	10	1	243	20	263	3.60e-14	72.0
MsG0580025592.01.T01	AT3G55550	29.084	251	149	8	10	246	26	261	4.10e-13	68.9
MsG0580025592.01.T01	AT5G03140	29.464	224	133	9	26	241	51	257	1.08e-12	67.8
MsG0580025592.01.T01	AT2G29250	32.035	231	117	12	33	243	51	261	2.35e-12	66.6
MsG0580025592.01.T01	AT3G08870	26.103	272	146	11	7	246	33	281	5.32e-12	65.5
MsG0580025592.01.T01	AT3G08870	26.103	272	146	11	7	246	54	302	5.63e-12	65.5
MsG0580025592.01.T01	AT2G29220	30.736	231	120	12	33	243	51	261	1.22e-11	64.7
MsG0580025592.01.T01	AT4G04960	27.668	253	152	8	4	241	17	253	1.78e-11	63.9
MsG0580025592.01.T01	AT5G01540	27.407	270	156	11	1	245	24	278	1.88e-11	63.9
MsG0580025592.01.T01	AT4G04960	27.668	253	152	8	4	241	17	253	2.76e-11	63.5

Find 50 sgRNAs with CRISPR-Local

Find 67 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ATCTCACACCAATTCATATT+TGG	0.097582	5:+20971821	MsG0580025592.01.T01:CDS
AGCTTCTCCTAAAGCATTTC+TGG	0.122535	5:-20972172	None:intergenic
TCGAACTCAATAGCTATTAT+TGG	0.165082	5:-20972036	None:intergenic
TTGCTCGTCCAACGCTCTTT+TGG	0.226039	5:-20971795	None:intergenic
CCTCACATTGGAATTGATAT+TGG	0.267772	5:+20972102	MsG0580025592.01.T01:CDS
GTGAAAGAAACAGTATTTCT+TGG	0.271203	5:-20971664	None:intergenic
GATGGATTTGCTTTCTATAT+CGG	0.304082	5:+20971925	MsG0580025592.01.T01:CDS
AAATACATGATATCATTAAT+TGG	0.342487	5:+20972355	MsG0580025592.01.T01:CDS
AATTCAAGTGGCGGCTATCT+TGG	0.364845	5:+20971973	MsG0580025592.01.T01:CDS
TCTCACACCAATTCATATTT+GGG	0.378118	5:+20971822	MsG0580025592.01.T01:CDS
AATCCAACTCTATCCCATTC+AGG	0.383760	5:-20972306	None:intergenic
TTTGGAGTGGTTCACCGGAT+TGG	0.425850	5:-20971777	None:intergenic
TAAGAGATTGAGTGTGTTTG+TGG	0.427985	5:+20972218	MsG0580025592.01.T01:CDS
TGAGGAGTATTCTTCCTGAA+TGG	0.428682	5:+20972292	MsG0580025592.01.T01:CDS
GAGGAGTATTCTTCCTGAAT+GGG	0.431765	5:+20972293	MsG0580025592.01.T01:CDS
AGTGTGTTTGTGGATTATCC+TGG	0.441394	5:+20972228	MsG0580025592.01.T01:CDS
AAAATCCCGACATATTTCTC+AGG	0.449696	5:+20971707	MsG0580025592.01.T01:CDS
GAAGGATCAAATGCTGTCTC+CGG	0.466446	5:-20972006	None:intergenic
ATTCAGTTGCAACTGTGAAC+TGG	0.481680	5:+20972133	MsG0580025592.01.T01:CDS
GTTGCTTTCGTCCCGCTCCC+AGG	0.482406	5:-20972246	None:intergenic
GTTGGATTCTCGGCTGCAGC+AGG	0.484875	5:+20972321	MsG0580025592.01.T01:CDS
GGTTCAGAATTCCACGGAGA+TGG	0.488106	5:+20971907	MsG0580025592.01.T01:CDS
ATGGGATAGAGTTGGATTCT+CGG	0.494775	5:+20972311	MsG0580025592.01.T01:CDS
AGGGGAGATGCCTCAATCTC+CGG	0.497533	5:+20971727	MsG0580025592.01.T01:CDS
CTTCCTGAATGGGATAGAGT+TGG	0.499867	5:+20972303	MsG0580025592.01.T01:CDS
TTGTGGATTATCCTGGGAGC+GGG	0.510706	5:+20972235	MsG0580025592.01.T01:CDS
GGGAGCGGGACGAAAGCAAC+TGG	0.511327	5:+20972249	MsG0580025592.01.T01:CDS
CTCGGCTGCAGCAGGAGAGT+TGG	0.516087	5:+20972329	MsG0580025592.01.T01:CDS
TAAAATGCCACCGGAGATTG+AGG	0.521385	5:-20971737	None:intergenic
GAGTGGTTCACCGGATTGGT+TGG	0.527173	5:-20971773	None:intergenic
GTGTGTTTGTGGATTATCCT+GGG	0.527277	5:+20972229	MsG0580025592.01.T01:CDS
CATATTTGGGATAAAACTAG+TGG	0.531128	5:+20971835	MsG0580025592.01.T01:CDS
GTATTTCTTGGTTGTTGCAA+TGG	0.533361	5:-20971652	None:intergenic
TGTTAGCTTTAAAATGCCAC+CGG	0.538197	5:-20971746	None:intergenic
GGATATTGAGATGGTGAAGC+TGG	0.545088	5:-20972081	None:intergenic
TTCGGTACTTCAAAATGAAG+TGG	0.550729	5:-20971949	None:intergenic
AAATCCCGACATATTTCTCA+GGG	0.568484	5:+20971708	MsG0580025592.01.T01:CDS
AAGGATCAAATGCTGTCTCC+GGG	0.572192	5:-20972005	None:intergenic
ATCTCCCCTGAGAAATATGT+CGG	0.572753	5:-20971713	None:intergenic
CACACTCAATCTCTTAGACT+CGG	0.578432	5:-20972211	None:intergenic
GAACCACTCCAAAAGAGCGT+TGG	0.588595	5:+20971787	MsG0580025592.01.T01:CDS
TCTCCCCTGAGAAATATGTC+GGG	0.591905	5:-20971712	None:intergenic
CCATCTCAATATCCTCACAT+TGG	0.593308	5:+20972090	MsG0580025592.01.T01:CDS
TTTGTGGATTATCCTGGGAG+CGG	0.594000	5:+20972234	MsG0580025592.01.T01:CDS
CCAATATCAATTCCAATGTG+AGG	0.620605	5:-20972102	None:intergenic
GGAGATGCCTCAATCTCCGG+TGG	0.669380	5:+20971730	MsG0580025592.01.T01:CDS
CCAATGTGAGGATATTGAGA+TGG	0.671042	5:-20972090	None:intergenic
AGAAAGCAAATCCATCTCCG+TGG	0.678902	5:-20971918	None:intergenic
ACAAACGGTTCAGAATTCCA+CGG	0.693197	5:+20971901	MsG0580025592.01.T01:CDS
AATCCCGACATATTTCTCAG+GGG	0.779489	5:+20971709	MsG0580025592.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAATACATGATATCATTAAT+TGG	+	Chr5:20972355-20972374	MsG0580025592.01.T01:CDS	15.0%
!!!	AATAGCTATTATTGGATTTT+TGG	-	Chr5:20972031-20972050	None:intergenic	20.0%
!!	GTTTTATCCCAAATATGAAT+TGG	-	Chr5:20971832-20971851	None:intergenic	25.0%
!!!	AGTTCGATAGTTTTACAAAT+GGG	+	Chr5:20972052-20972071	MsG0580025592.01.T01:CDS	25.0%
	ATCTCACACCAATTCATATT+TGG	+	Chr5:20971821-20971840	MsG0580025592.01.T01:CDS	30.0%
	GTGAAAGAAACAGTATTTCT+TGG	-	Chr5:20971667-20971686	None:intergenic	30.0%
	TCGAACTCAATAGCTATTAT+TGG	-	Chr5:20972039-20972058	None:intergenic	30.0%
	TCTCACACCAATTCATATTT+GGG	+	Chr5:20971822-20971841	MsG0580025592.01.T01:CDS	30.0%
!	CATATTTGGGATAAAACTAG+TGG	+	Chr5:20971835-20971854	MsG0580025592.01.T01:CDS	30.0%
!	GATGGATTTGCTTTCTATAT+CGG	+	Chr5:20971925-20971944	MsG0580025592.01.T01:CDS	30.0%
!!	GAGTTCGATAGTTTTACAAA+TGG	+	Chr5:20972051-20972070	MsG0580025592.01.T01:CDS	30.0%
!!	GCTATTATTGGATTTTTGGA+AGG	-	Chr5:20972027-20972046	None:intergenic	30.0%
!!	TTCTTTTTCGTGAACACAAA+CGG	+	Chr5:20971886-20971905	MsG0580025592.01.T01:CDS	30.0%
!!!	TCTCTTTTGTTGTTGATTTG+AGG	+	Chr5:20972274-20972293	MsG0580025592.01.T01:CDS	30.0%
	AAAATCCCGACATATTTCTC+AGG	+	Chr5:20971707-20971726	MsG0580025592.01.T01:CDS	35.0%
	AAATCCCGACATATTTCTCA+GGG	+	Chr5:20971708-20971727	MsG0580025592.01.T01:CDS	35.0%
	CACGAAAAAGAAGAAATGAG+TGG	-	Chr5:20971878-20971897	None:intergenic	35.0%
	CCAATATCAATTCCAATGTG+AGG	-	Chr5:20972105-20972124	None:intergenic	35.0%
	CCTCACATTGGAATTGATAT+TGG	+	Chr5:20972102-20972121	MsG0580025592.01.T01:CDS	35.0%
	CTAACAAAAACCAACCAATC+CGG	+	Chr5:20971763-20971782	MsG0580025592.01.T01:CDS	35.0%
	TAAGAGATTGAGTGTGTTTG+TGG	+	Chr5:20972218-20972237	MsG0580025592.01.T01:CDS	35.0%
	TTCGGTACTTCAAAATGAAG+TGG	-	Chr5:20971952-20971971	None:intergenic	35.0%
!	GTTTTGTCCAGAAATGCTTT+AGG	+	Chr5:20972165-20972184	MsG0580025592.01.T01:CDS	35.0%
!!	CGATAGTTTTACAAATGGGT+GGG	+	Chr5:20972056-20972075	MsG0580025592.01.T01:CDS	35.0%
!!	GAAGTACCGAAAAATTCAAG+TGG	+	Chr5:20971961-20971980	MsG0580025592.01.T01:CDS	35.0%
!!	TCGATAGTTTTACAAATGGG+TGG	+	Chr5:20972055-20972074	MsG0580025592.01.T01:CDS	35.0%
!!	TGTTAGCTTTAAAATGCCAC+CGG	-	Chr5:20971749-20971768	None:intergenic	35.0%
	AATCCAACTCTATCCCATTC+AGG	-	Chr5:20972309-20972328	None:intergenic	40.0%
	AATCCCGACATATTTCTCAG+GGG	+	Chr5:20971709-20971728	MsG0580025592.01.T01:CDS	40.0%
	ACAAACGGTTCAGAATTCCA+CGG	+	Chr5:20971901-20971920	MsG0580025592.01.T01:CDS	40.0%
	ATCTCCCCTGAGAAATATGT+CGG	-	Chr5:20971716-20971735	None:intergenic	40.0%
	ATGGGATAGAGTTGGATTCT+CGG	+	Chr5:20972311-20972330	MsG0580025592.01.T01:CDS	40.0%
	ATTCAGTTGCAACTGTGAAC+TGG	+	Chr5:20972133-20972152	MsG0580025592.01.T01:CDS	40.0%
	CACACTCAATCTCTTAGACT+CGG	-	Chr5:20972214-20972233	None:intergenic	40.0%
	CCAATGTGAGGATATTGAGA+TGG	-	Chr5:20972093-20972112	None:intergenic	40.0%
	CCATCTCAATATCCTCACAT+TGG	+	Chr5:20972090-20972109	MsG0580025592.01.T01:CDS	40.0%
	GTACCGAAAAATTCAAGTGG+CGG	+	Chr5:20971964-20971983	MsG0580025592.01.T01:CDS	40.0%
!	AGCTTCTCCTAAAGCATTTC+TGG	-	Chr5:20972175-20972194	None:intergenic	40.0%
!	AGTGTGTTTGTGGATTATCC+TGG	+	Chr5:20972228-20972247	MsG0580025592.01.T01:CDS	40.0%
!	GTGTGTTTGTGGATTATCCT+GGG	+	Chr5:20972229-20972248	MsG0580025592.01.T01:CDS	40.0%
!	TAGCCGCCACTTGAATTTTT+CGG	-	Chr5:20971970-20971989	None:intergenic	40.0%
!!	GAGGAGTATTCTTCCTGAAT+GGG	+	Chr5:20972293-20972312	MsG0580025592.01.T01:CDS	40.0%
!!	TGAGGAGTATTCTTCCTGAA+TGG	+	Chr5:20972292-20972311	MsG0580025592.01.T01:CDS	40.0%
	AAGGATCAAATGCTGTCTCC+GGG	-	Chr5:20972008-20972027	None:intergenic	45.0%
	AATTCAAGTGGCGGCTATCT+TGG	+	Chr5:20971973-20971992	MsG0580025592.01.T01:CDS	45.0%
	AGAAAGCAAATCCATCTCCG+TGG	-	Chr5:20971921-20971940	None:intergenic	45.0%
	CTTCCTGAATGGGATAGAGT+TGG	+	Chr5:20972303-20972322	MsG0580025592.01.T01:CDS	45.0%
	GAAGGATCAAATGCTGTCTC+CGG	-	Chr5:20972009-20972028	None:intergenic	45.0%
	GGATATTGAGATGGTGAAGC+TGG	-	Chr5:20972084-20972103	None:intergenic	45.0%
	TAAAATGCCACCGGAGATTG+AGG	-	Chr5:20971740-20971759	None:intergenic	45.0%
	TCTCCCCTGAGAAATATGTC+GGG	-	Chr5:20971715-20971734	None:intergenic	45.0%
!	TTTGTGGATTATCCTGGGAG+CGG	+	Chr5:20972234-20972253	MsG0580025592.01.T01:CDS	45.0%
!!	CTATCTTGGTCTTTTCGACC+CGG	+	Chr5:20971987-20972006	MsG0580025592.01.T01:CDS	45.0%
	GGTTCAGAATTCCACGGAGA+TGG	+	Chr5:20971907-20971926	MsG0580025592.01.T01:CDS	50.0%
!	GAACCACTCCAAAAGAGCGT+TGG	+	Chr5:20971787-20971806	MsG0580025592.01.T01:CDS	50.0%
!	TTGCTCGTCCAACGCTCTTT+TGG	-	Chr5:20971798-20971817	None:intergenic	50.0%
!	TTGTGGATTATCCTGGGAGC+GGG	+	Chr5:20972235-20972254	MsG0580025592.01.T01:CDS	50.0%
!	TTTGGAGTGGTTCACCGGAT+TGG	-	Chr5:20971780-20971799	None:intergenic	50.0%
!!!	GCTCTTTTGGAGTGGTTCAC+CGG	-	Chr5:20971785-20971804	None:intergenic	50.0%
	AGGGGAGATGCCTCAATCTC+CGG	+	Chr5:20971727-20971746	MsG0580025592.01.T01:CDS	55.0%
!!	CGTCCAACGCTCTTTTGGAG+TGG	-	Chr5:20971793-20971812	None:intergenic	55.0%
!!	GAGTGGTTCACCGGATTGGT+TGG	-	Chr5:20971776-20971795	None:intergenic	55.0%
	GGAGATGCCTCAATCTCCGG+TGG	+	Chr5:20971730-20971749	MsG0580025592.01.T01:CDS	60.0%
	GTTGGATTCTCGGCTGCAGC+AGG	+	Chr5:20972321-20972340	MsG0580025592.01.T01:CDS	60.0%
	CTCGGCTGCAGCAGGAGAGT+TGG	+	Chr5:20972329-20972348	MsG0580025592.01.T01:CDS	65.0%
	GGGAGCGGGACGAAAGCAAC+TGG	+	Chr5:20972249-20972268	MsG0580025592.01.T01:CDS	65.0%
!	GTTGCTTTCGTCCCGCTCCC+AGG	-	Chr5:20972249-20972268	None:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
Chr5	gene	20971655	20972398	20971655	ID=MsG0580025592.01;Name=MsG0580025592.01
Chr5	mRNA	20971655	20972398	20971655	ID=MsG0580025592.01.T01;Parent=MsG0580025592.01;Name=MsG0580025592.01.T01;_AED=0.43;_eAED=0.43;_QI=0\|-1\|0\|1\|-1\|1\|1\|0\|247
Chr5	exon	20971655	20972398	20971655	ID=MsG0580025592.01.T01:exon:23440;Parent=MsG0580025592.01.T01
Chr5	CDS	20971655	20972398	20971655	ID=MsG0580025592.01.T01:cds;Parent=MsG0580025592.01.T01

Gene Sequence

>MsG0580025592.01.T01

TTGCAACAACCAAGAAATACTGTTTCTTTCACTATATTAGAATTCGAGAAAGAAAATCCCGACATATTTCTCAGGGGAGATGCCTCAATCTCCGGTGGCATTTTAAAGCTAACAAAAACCAACCAATCCGGTGAACCACTCCAAAAGAGCGTTGGACGAGCAACACATCTCACACCAATTCATATTTGGGATAAAACTAGTGGAAAACTAGCAGATTTCTCCACTCATTTCTTCTTTTTCGTGAACACAAACGGTTCAGAATTCCACGGAGATGGATTTGCTTTCTATATCGGACCACTTCATTTTGAAGTACCGAAAAATTCAAGTGGCGGCTATCTTGGTCTTTTCGACCCGGAGACAGCATTTGATCCTTCCAAAAATCCAATAATAGCTATTGAGTTCGATAGTTTTACAAATGGGTGGGATCCAGCTTCACCATCTCAATATCCTCACATTGGAATTGATATTGGTTCTATTGATTCAGTTGCAACTGTGAACTGGCATGTTGATGTTTTGTCCAGAAATGCTTTAGGAGAAGCTATTATAAACTATAACTCCGAGTCTAAGAGATTGAGTGTGTTTGTGGATTATCCTGGGAGCGGGACGAAAGCAACTGGTATCTCTTTTGTTGTTGATTTGAGGAGTATTCTTCCTGAATGGGATAGAGTTGGATTCTCGGCTGCAGCAGGAGAGTTGGTTGAAATACATGATATCATTAATTGGTCTTTCGAATCATCTTTGTAA

Protein sequence

>MsG0580025592.01.T01

LQQPRNTVSFTILEFEKENPDIFLRGDASISGGILKLTKTNQSGEPLQKSVGRATHLTPIHIWDKTSGKLADFSTHFFFFVNTNGSEFHGDGFAFYIGPLHFEVPKNSSGGYLGLFDPETAFDPSKNPIIAIEFDSFTNGWDPASPSQYPHIGIDIGSIDSVATVNWHVDVLSRNALGEAIINYNSESKRLSVFVDYPGSGTKATGISFVVDLRSILPEWDRVGFSAAAGELVEIHDIINWSFESSL*