Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0380013595.01.T01 | XP_003599808.2 | 83.274 | 281 | 46 | 1 | 1 | 280 | 1 | 281 | 1.06E-165 | 470 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0380013595.01.T01 | Q41160 | 52.344 | 256 | 118 | 3 | 13 | 266 | 8 | 261 | 8.55E-79 | 242 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0380013594.01 | MsG0380013595.01 | 0.888604 | 5.094562e-73 | 3.973684e-69 |
PPI
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0380013595.01.T01 | MTR_3g047140 | 83.274 | 281 | 46 | 1 | 1 | 280 | 1 | 281 | 1.29e-169 | 470 |
MsG0380013595.01.T01 | MTR_0684s0020 | 63.768 | 276 | 99 | 1 | 1 | 276 | 1 | 275 | 3.33e-111 | 322 |
MsG0380013595.01.T01 | MTR_0163s0020 | 63.768 | 276 | 99 | 1 | 1 | 276 | 2 | 276 | 3.56e-111 | 322 |
MsG0380013595.01.T01 | MTR_1g090973 | 51.724 | 261 | 124 | 2 | 1 | 260 | 1 | 260 | 2.66e-84 | 254 |
MsG0380013595.01.T01 | MTR_3g054170 | 52.000 | 250 | 118 | 1 | 11 | 260 | 7 | 254 | 6.65e-81 | 244 |
MsG0380013595.01.T01 | MTR_3g054200 | 51.004 | 249 | 120 | 1 | 12 | 260 | 8 | 254 | 3.76e-77 | 235 |
MsG0380013595.01.T01 | MTR_3g054180 | 51.984 | 252 | 115 | 3 | 12 | 260 | 12 | 260 | 1.78e-75 | 231 |
MsG0380013595.01.T01 | MTR_1g090960 | 47.842 | 278 | 98 | 7 | 1 | 268 | 1 | 241 | 8.08e-71 | 218 |
MsG0380013595.01.T01 | MTR_1g090943 | 49.618 | 262 | 120 | 7 | 14 | 268 | 15 | 271 | 4.25e-66 | 207 |
MsG0380013595.01.T01 | MTR_3g027280 | 49.286 | 280 | 121 | 12 | 1 | 266 | 1 | 273 | 2.65e-62 | 198 |
MsG0380013595.01.T01 | MTR_1g090937 | 43.273 | 275 | 138 | 10 | 1 | 266 | 1 | 266 | 2.20e-52 | 172 |
MsG0380013595.01.T01 | MTR_1g090930 | 44.170 | 283 | 128 | 9 | 1 | 266 | 1 | 270 | 3.32e-51 | 170 |
MsG0380013595.01.T01 | MTR_1g090957 | 44.840 | 281 | 124 | 12 | 1 | 268 | 1 | 263 | 2.67e-50 | 167 |
MsG0380013595.01.T01 | MTR_8g068050 | 40.000 | 270 | 144 | 7 | 11 | 268 | 18 | 281 | 3.01e-46 | 165 |
MsG0380013595.01.T01 | MTR_8g068030 | 38.722 | 266 | 136 | 9 | 14 | 261 | 10 | 266 | 2.79e-45 | 154 |
MsG0380013595.01.T01 | MTR_8g068040 | 38.697 | 261 | 139 | 8 | 14 | 261 | 10 | 262 | 4.32e-44 | 150 |
MsG0380013595.01.T01 | MTR_4g023810 | 42.975 | 242 | 125 | 9 | 30 | 266 | 27 | 260 | 4.12e-43 | 148 |
MsG0380013595.01.T01 | MTR_8g023510 | 40.562 | 249 | 135 | 9 | 19 | 260 | 17 | 259 | 1.48e-41 | 144 |
MsG0380013595.01.T01 | MTR_5g031160 | 37.143 | 280 | 149 | 7 | 7 | 260 | 9 | 287 | 5.70e-41 | 143 |
MsG0380013595.01.T01 | MTR_5g031140 | 38.078 | 281 | 144 | 9 | 7 | 260 | 9 | 286 | 2.39e-39 | 139 |
MsG0380013595.01.T01 | MTR_5g031120 | 38.525 | 244 | 128 | 7 | 36 | 260 | 39 | 279 | 1.09e-36 | 132 |
MsG0380013595.01.T01 | MTR_5g031100 | 38.525 | 244 | 127 | 8 | 36 | 260 | 39 | 278 | 1.36e-36 | 131 |
MsG0380013595.01.T01 | MTR_8g067980 | 38.235 | 238 | 127 | 12 | 36 | 258 | 25 | 257 | 4.84e-36 | 129 |
MsG0380013595.01.T01 | MTR_8g067990 | 38.288 | 222 | 119 | 9 | 50 | 258 | 41 | 257 | 2.13e-33 | 123 |
MsG0380013595.01.T01 | MTR_4g093080 | 33.333 | 264 | 157 | 7 | 17 | 267 | 9 | 266 | 2.04e-32 | 126 |
MsG0380013595.01.T01 | MTR_8g067960 | 37.946 | 224 | 120 | 8 | 50 | 260 | 24 | 241 | 3.78e-32 | 119 |
MsG0380013595.01.T01 | MTR_4g056320 | 36.742 | 264 | 123 | 9 | 8 | 266 | 11 | 235 | 1.13e-31 | 118 |
MsG0380013595.01.T01 | MTR_5g031090 | 34.553 | 246 | 140 | 8 | 34 | 260 | 32 | 275 | 4.24e-31 | 117 |
MsG0380013595.01.T01 | MTR_7g115740 | 34.361 | 227 | 131 | 8 | 50 | 261 | 38 | 261 | 1.45e-30 | 120 |
MsG0380013595.01.T01 | MTR_8g067940 | 35.926 | 270 | 143 | 13 | 12 | 258 | 17 | 279 | 1.17e-29 | 113 |
MsG0380013595.01.T01 | MTR_5g031030 | 34.711 | 242 | 141 | 8 | 34 | 260 | 35 | 274 | 3.33e-29 | 112 |
MsG0380013595.01.T01 | MTR_4g093140 | 32.593 | 270 | 158 | 10 | 4 | 260 | 6 | 264 | 4.42e-29 | 116 |
MsG0380013595.01.T01 | MTR_7g116130 | 33.333 | 267 | 152 | 12 | 15 | 263 | 6 | 264 | 1.33e-28 | 115 |
MsG0380013595.01.T01 | MTR_1g014240 | 35.849 | 212 | 121 | 5 | 76 | 273 | 78 | 288 | 1.69e-27 | 112 |
MsG0380013595.01.T01 | MTR_8g067735 | 30.627 | 271 | 168 | 9 | 13 | 270 | 25 | 288 | 1.79e-27 | 112 |
MsG0380013595.01.T01 | MTR_4g093110 | 31.852 | 270 | 160 | 10 | 4 | 260 | 6 | 264 | 2.87e-27 | 111 |
MsG0380013595.01.T01 | MTR_4g093040 | 33.202 | 253 | 143 | 11 | 6 | 241 | 9 | 252 | 1.22e-25 | 106 |
MsG0380013595.01.T01 | MTR_4g093070 | 31.599 | 269 | 159 | 8 | 5 | 260 | 10 | 266 | 2.94e-25 | 105 |
MsG0380013595.01.T01 | MTR_3g463370 | 33.456 | 272 | 126 | 8 | 11 | 271 | 6 | 233 | 1.35e-24 | 99.4 |
MsG0380013595.01.T01 | MTR_8g067630 | 31.982 | 222 | 138 | 6 | 36 | 247 | 31 | 249 | 1.88e-24 | 102 |
MsG0380013595.01.T01 | MTR_8g067930 | 30.597 | 268 | 166 | 9 | 13 | 267 | 6 | 266 | 3.92e-24 | 102 |
MsG0380013595.01.T01 | MTR_4g093040 | 39.645 | 169 | 87 | 6 | 87 | 241 | 3 | 170 | 7.67e-24 | 101 |
MsG0380013595.01.T01 | MTR_8g067720 | 29.496 | 278 | 175 | 10 | 10 | 277 | 5 | 271 | 1.82e-23 | 100 |
MsG0380013595.01.T01 | MTR_4g093050 | 30.769 | 247 | 138 | 10 | 36 | 258 | 27 | 264 | 2.08e-22 | 97.1 |
MsG0380013595.01.T01 | MTR_8g067690 | 31.356 | 236 | 149 | 6 | 36 | 260 | 61 | 294 | 9.09e-21 | 92.4 |
MsG0380013595.01.T01 | MTR_5g025020 | 30.516 | 213 | 120 | 7 | 77 | 271 | 88 | 290 | 1.33e-18 | 85.9 |
MsG0380013595.01.T01 | MTR_1g048360 | 29.528 | 254 | 157 | 8 | 19 | 259 | 17 | 261 | 1.10e-16 | 80.1 |
MsG0380013595.01.T01 | MTR_8g068050 | 30.435 | 184 | 119 | 4 | 11 | 192 | 18 | 194 | 2.24e-16 | 79.3 |
MsG0380013595.01.T01 | MTR_7g115740 | 34.109 | 129 | 75 | 5 | 50 | 170 | 38 | 164 | 3.63e-15 | 75.5 |
MsG0380013595.01.T01 | MTR_2g013720 | 29.851 | 268 | 151 | 11 | 13 | 256 | 8 | 262 | 1.19e-14 | 74.3 |
MsG0380013595.01.T01 | MTR_7g063010 | 30.435 | 230 | 138 | 9 | 46 | 257 | 32 | 257 | 3.08e-14 | 73.2 |
MsG0380013595.01.T01 | MTR_7g062940 | 29.699 | 266 | 155 | 13 | 13 | 257 | 2 | 256 | 4.58e-14 | 72.4 |
MsG0380013595.01.T01 | MTR_2g090250 | 27.193 | 228 | 145 | 7 | 48 | 256 | 34 | 259 | 5.13e-14 | 72.4 |
MsG0380013595.01.T01 | MTR_2g090410 | 35.294 | 136 | 78 | 5 | 50 | 179 | 34 | 165 | 6.93e-14 | 72.0 |
MsG0380013595.01.T01 | MTR_3g068025 | 27.715 | 267 | 165 | 8 | 15 | 257 | 6 | 268 | 1.22e-13 | 71.2 |
MsG0380013595.01.T01 | MTR_5g068770 | 29.741 | 232 | 136 | 9 | 46 | 258 | 54 | 277 | 1.28e-13 | 71.2 |
MsG0380013595.01.T01 | MTR_5g077100 | 31.193 | 218 | 133 | 7 | 54 | 262 | 45 | 254 | 1.40e-13 | 70.9 |
MsG0380013595.01.T01 | MTR_7g062890 | 29.323 | 266 | 155 | 13 | 16 | 257 | 1 | 257 | 9.72e-11 | 62.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0380013595.01.T01 | AT5G10530 | 35.055 | 271 | 135 | 13 | 10 | 261 | 7 | 255 | 2.78e-26 | 108 |
MsG0380013595.01.T01 | AT5G65600 | 35.556 | 180 | 102 | 5 | 76 | 241 | 76 | 255 | 4.90e-22 | 96.3 |
MsG0380013595.01.T01 | AT5G55830 | 30.000 | 290 | 168 | 13 | 14 | 277 | 7 | 287 | 1.02e-16 | 80.5 |
MsG0380013595.01.T01 | AT5G03140 | 28.400 | 250 | 164 | 7 | 17 | 254 | 11 | 257 | 3.57e-16 | 79.0 |
MsG0380013595.01.T01 | AT4G29050 | 29.703 | 202 | 119 | 7 | 77 | 257 | 60 | 259 | 7.49e-14 | 72.0 |
MsG0380013595.01.T01 | AT4G29050 | 29.703 | 202 | 119 | 7 | 77 | 257 | 74 | 273 | 7.69e-14 | 72.0 |
MsG0380013595.01.T01 | AT4G04960 | 29.082 | 196 | 120 | 6 | 77 | 254 | 59 | 253 | 4.95e-12 | 66.2 |
MsG0380013595.01.T01 | AT4G04960 | 29.082 | 196 | 120 | 6 | 77 | 254 | 59 | 253 | 8.11e-12 | 65.9 |
MsG0380013595.01.T01 | AT4G02420 | 29.259 | 270 | 154 | 14 | 13 | 256 | 2 | 260 | 6.42e-11 | 63.2 |
MsG0380013595.01.T01 | AT2G29250 | 28.440 | 218 | 125 | 10 | 62 | 256 | 52 | 261 | 7.31e-11 | 62.8 |
Find 47 sgRNAs with CRISPR-Local
Find 59 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTCTTAGGAATCACACTATT+TGG | 0.202064 | 3:-41381499 | None:intergenic |
ATACCAACGCTAACTGTTTC+TGG | 0.220985 | 3:-41381814 | None:intergenic |
GATCCTAACAATGCACATAT+TGG | 0.297717 | 3:+41381613 | MsG0380013595.01.T01:CDS |
GGGACATGGAAAACAGAAAT+TGG | 0.305299 | 3:+41381670 | MsG0380013595.01.T01:CDS |
GCACGGCCTACAATCGTATA+AGG | 0.309184 | 3:-41381340 | None:intergenic |
ACACAAAGGAAAATAGTTTC+TGG | 0.315222 | 3:-41381147 | None:intergenic |
TCTCCACCATGTGTGTTCTT+AGG | 0.322895 | 3:-41381514 | None:intergenic |
GGGAACGGGTGTTGGATATA+AGG | 0.323393 | 3:-41381362 | None:intergenic |
ATCCAACACCCGTTCCCATT+TGG | 0.326894 | 3:+41381368 | MsG0380013595.01.T01:CDS |
TCTTTAATTTCATCCAAGAT+AGG | 0.332334 | 3:+41381649 | MsG0380013595.01.T01:CDS |
TTGATAATTATCACAATGAA+TGG | 0.357039 | 3:+41381590 | MsG0380013595.01.T01:CDS |
GAACACACATGGTGGAGATC+TGG | 0.367028 | 3:+41381519 | MsG0380013595.01.T01:CDS |
TCCAACACCCGTTCCCATTT+GGG | 0.369296 | 3:+41381369 | MsG0380013595.01.T01:CDS |
ACCGCTTTCAATCAATTTGT+TGG | 0.409746 | 3:+41381559 | MsG0380013595.01.T01:CDS |
ATCCTAACAATGCACATATT+GGG | 0.411998 | 3:+41381614 | MsG0380013595.01.T01:CDS |
GATGACCCTTATACGATTGT+AGG | 0.417516 | 3:+41381334 | MsG0380013595.01.T01:CDS |
TCCCAAATGGGAACGGGTGT+TGG | 0.421568 | 3:-41381370 | None:intergenic |
CCCATTTGGGATAAAACAAC+TGG | 0.423041 | 3:+41381382 | MsG0380013595.01.T01:CDS |
TAATGAGTGCATTCCCTTGA+AGG | 0.425484 | 3:-41381279 | None:intergenic |
GAAAATAGTTTCTGGTTATG+TGG | 0.433314 | 3:-41381139 | None:intergenic |
GTTTCTCTCATTGATGAGCT+TGG | 0.446561 | 3:+41381745 | MsG0380013595.01.T01:CDS |
ATCCCAATATGTGCATTGTT+AGG | 0.450564 | 3:-41381616 | None:intergenic |
CTCAGTTGCAAGCAAGAGAA+AGG | 0.475267 | 3:-41381188 | None:intergenic |
GGTGGTCTTCAACCAGCTGA+TGG | 0.478343 | 3:+41381454 | MsG0380013595.01.T01:CDS |
TGATAATTATCACAATGAAT+GGG | 0.484393 | 3:+41381591 | MsG0380013595.01.T01:CDS |
AACACACATGGTGGAGATCT+GGG | 0.502642 | 3:+41381520 | MsG0380013595.01.T01:CDS |
CTTTAATTTCATCCAAGATA+GGG | 0.502694 | 3:+41381650 | MsG0380013595.01.T01:CDS |
AATGAGTGCATTCCCTTGAA+GGG | 0.508832 | 3:-41381278 | None:intergenic |
TTAGGAATCACACTATTTGG+TGG | 0.526107 | 3:-41381496 | None:intergenic |
GCTGGTTGAAGACCACCAAC+CGG | 0.528758 | 3:-41381448 | None:intergenic |
ATAAGGGTCATCTTGAATGC+TGG | 0.538954 | 3:-41381323 | None:intergenic |
CACGGCCTACAATCGTATAA+GGG | 0.543736 | 3:-41381339 | None:intergenic |
GACTTAGCTGAGTACACCTC+TGG | 0.546275 | 3:+41381241 | MsG0380013595.01.T01:CDS |
GTGGTGCAAGAAAGAAGATA+AGG | 0.570237 | 3:-41381477 | None:intergenic |
GTGGACCATATCAACTCATA+CGG | 0.574991 | 3:-41381957 | None:intergenic |
ACCAACAAATTGATTGAAAG+CGG | 0.579038 | 3:-41381560 | None:intergenic |
CTTCCAGAAACAGTTAGCGT+TGG | 0.583927 | 3:+41381811 | MsG0380013595.01.T01:CDS |
AAGAAGATAAGGCCATCAGC+TGG | 0.583975 | 3:-41381466 | None:intergenic |
TTGACGTTGTTCAAATGATG+TGG | 0.619970 | 3:-41381845 | None:intergenic |
TTTCATCCAAGATAGGGACA+TGG | 0.631840 | 3:+41381656 | MsG0380013595.01.T01:CDS |
AAATACATGTCATTGAAACA+TGG | 0.641886 | 3:+41381866 | MsG0380013595.01.T01:CDS |
CGGGTGTTGGATATAAGGCA+CGG | 0.656236 | 3:-41381357 | None:intergenic |
GGTGTACTCAGCTAAGTCGA+AGG | 0.656926 | 3:-41381236 | None:intergenic |
ACTCATTAAAGAAAATCACT+TGG | 0.669916 | 3:+41381294 | MsG0380013595.01.T01:CDS |
TGTAAAGATGACCAACACAA+AGG | 0.670119 | 3:-41381161 | None:intergenic |
ATTCCTAAGAACACACATGG+TGG | 0.680802 | 3:+41381511 | MsG0380013595.01.T01:CDS |
GTGATTCCTAAGAACACACA+TGG | 0.690560 | 3:+41381508 | MsG0380013595.01.T01:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TGATAATTATCACAATGAAT+GGG | + | Chr3:41381591-41381610 | MsG0380013595.01.T01:CDS | 20.0% |
!!! | TTGATAATTATCACAATGAA+TGG | + | Chr3:41381590-41381609 | MsG0380013595.01.T01:CDS | 20.0% |
! | AAAAAAAAACTAACCCTTCA+AGG | + | Chr3:41381265-41381284 | MsG0380013595.01.T01:CDS | 25.0% |
! | AAAAAAAACTAACCCTTCAA+GGG | + | Chr3:41381266-41381285 | MsG0380013595.01.T01:CDS | 25.0% |
! | AAATACATGTCATTGAAACA+TGG | + | Chr3:41381866-41381885 | MsG0380013595.01.T01:CDS | 25.0% |
! | ACTCATTAAAGAAAATCACT+TGG | + | Chr3:41381294-41381313 | MsG0380013595.01.T01:CDS | 25.0% |
!! | CTTTAATTTCATCCAAGATA+GGG | + | Chr3:41381650-41381669 | MsG0380013595.01.T01:CDS | 25.0% |
!! | TCTTTAATTTCATCCAAGAT+AGG | + | Chr3:41381649-41381668 | MsG0380013595.01.T01:CDS | 25.0% |
ACACAAAGGAAAATAGTTTC+TGG | - | Chr3:41381150-41381169 | None:intergenic | 30.0% | |
ACCAACAAATTGATTGAAAG+CGG | - | Chr3:41381563-41381582 | None:intergenic | 30.0% | |
ATCCTAACAATGCACATATT+GGG | + | Chr3:41381614-41381633 | MsG0380013595.01.T01:CDS | 30.0% | |
TTCTTAGGAATCACACTATT+TGG | - | Chr3:41381502-41381521 | None:intergenic | 30.0% | |
! | GAAACTATTTTCCTTTGTGT+TGG | + | Chr3:41381150-41381169 | MsG0380013595.01.T01:CDS | 30.0% |
!! | GAAAATAGTTTCTGGTTATG+TGG | - | Chr3:41381142-41381161 | None:intergenic | 30.0% |
!!! | GGTTAGTTTTTTTTTACCAG+AGG | - | Chr3:41381260-41381279 | None:intergenic | 30.0% |
ACCGCTTTCAATCAATTTGT+TGG | + | Chr3:41381559-41381578 | MsG0380013595.01.T01:CDS | 35.0% | |
ATCCCAATATGTGCATTGTT+AGG | - | Chr3:41381619-41381638 | None:intergenic | 35.0% | |
GATCCTAACAATGCACATAT+TGG | + | Chr3:41381613-41381632 | MsG0380013595.01.T01:CDS | 35.0% | |
TGTAAAGATGACCAACACAA+AGG | - | Chr3:41381164-41381183 | None:intergenic | 35.0% | |
TTAGGAATCACACTATTTGG+TGG | - | Chr3:41381499-41381518 | None:intergenic | 35.0% | |
TTGACGTTGTTCAAATGATG+TGG | - | Chr3:41381848-41381867 | None:intergenic | 35.0% | |
! | TGTTTTATCCCAAATGGGAA+CGG | - | Chr3:41381380-41381399 | None:intergenic | 35.0% |
!! | CCAGTTGTTTTATCCCAAAT+GGG | - | Chr3:41381385-41381404 | None:intergenic | 35.0% |
AATGAGTGCATTCCCTTGAA+GGG | - | Chr3:41381281-41381300 | None:intergenic | 40.0% | |
ATAAGGGTCATCTTGAATGC+TGG | - | Chr3:41381326-41381345 | None:intergenic | 40.0% | |
ATACCAACGCTAACTGTTTC+TGG | - | Chr3:41381817-41381836 | None:intergenic | 40.0% | |
ATTCCTAAGAACACACATGG+TGG | + | Chr3:41381511-41381530 | MsG0380013595.01.T01:CDS | 40.0% | |
GATGACCCTTATACGATTGT+AGG | + | Chr3:41381334-41381353 | MsG0380013595.01.T01:CDS | 40.0% | |
GGGACATGGAAAACAGAAAT+TGG | + | Chr3:41381670-41381689 | MsG0380013595.01.T01:CDS | 40.0% | |
GTGATTCCTAAGAACACACA+TGG | + | Chr3:41381508-41381527 | MsG0380013595.01.T01:CDS | 40.0% | |
GTGGTGCAAGAAAGAAGATA+AGG | - | Chr3:41381480-41381499 | None:intergenic | 40.0% | |
GTTTCTCTCATTGATGAGCT+TGG | + | Chr3:41381745-41381764 | MsG0380013595.01.T01:CDS | 40.0% | |
TAATGAGTGCATTCCCTTGA+AGG | - | Chr3:41381282-41381301 | None:intergenic | 40.0% | |
TTTCATCCAAGATAGGGACA+TGG | + | Chr3:41381656-41381675 | MsG0380013595.01.T01:CDS | 40.0% | |
! | CCCATTTGGGATAAAACAAC+TGG | + | Chr3:41381382-41381401 | MsG0380013595.01.T01:CDS | 40.0% |
! | CTTCTCTTTTTCTCTTGTGC+CGG | + | Chr3:41381429-41381448 | MsG0380013595.01.T01:CDS | 40.0% |
! | GTTTTATCCCAAATGGGAAC+GGG | - | Chr3:41381379-41381398 | None:intergenic | 40.0% |
! | TGTTTTCCATGTCCCTATCT+TGG | - | Chr3:41381665-41381684 | None:intergenic | 40.0% |
!! | GCCAGTTGTTTTATCCCAAA+TGG | - | Chr3:41381386-41381405 | None:intergenic | 40.0% |
AAGAAGATAAGGCCATCAGC+TGG | - | Chr3:41381469-41381488 | None:intergenic | 45.0% | |
CACGGCCTACAATCGTATAA+GGG | - | Chr3:41381342-41381361 | None:intergenic | 45.0% | |
CGGCACAAGAGAAAAAGAGA+AGG | - | Chr3:41381431-41381450 | None:intergenic | 45.0% | |
CTCAGTTGCAAGCAAGAGAA+AGG | - | Chr3:41381191-41381210 | None:intergenic | 45.0% | |
CTTCCAGAAACAGTTAGCGT+TGG | + | Chr3:41381811-41381830 | MsG0380013595.01.T01:CDS | 45.0% | |
TCTCCACCATGTGTGTTCTT+AGG | - | Chr3:41381517-41381536 | None:intergenic | 45.0% | |
! | AACACACATGGTGGAGATCT+GGG | + | Chr3:41381520-41381539 | MsG0380013595.01.T01:CDS | 45.0% |
!! | TCTTTTTCTCTTGTGCCGGT+TGG | + | Chr3:41381433-41381452 | MsG0380013595.01.T01:CDS | 45.0% |
ATCCAACACCCGTTCCCATT+TGG | + | Chr3:41381368-41381387 | MsG0380013595.01.T01:CDS | 50.0% | |
GACTTAGCTGAGTACACCTC+TGG | + | Chr3:41381241-41381260 | MsG0380013595.01.T01:CDS | 50.0% | |
GCACGGCCTACAATCGTATA+AGG | - | Chr3:41381343-41381362 | None:intergenic | 50.0% | |
GGTGTACTCAGCTAAGTCGA+AGG | - | Chr3:41381239-41381258 | None:intergenic | 50.0% | |
TCCAACACCCGTTCCCATTT+GGG | + | Chr3:41381369-41381388 | MsG0380013595.01.T01:CDS | 50.0% | |
! | GAACACACATGGTGGAGATC+TGG | + | Chr3:41381519-41381538 | MsG0380013595.01.T01:CDS | 50.0% |
!! | CGGGTGTTGGATATAAGGCA+CGG | - | Chr3:41381360-41381379 | None:intergenic | 50.0% |
!! | GGGAACGGGTGTTGGATATA+AGG | - | Chr3:41381365-41381384 | None:intergenic | 50.0% |
!!! | TTTTCTCTTGTGCCGGTTGG+TGG | + | Chr3:41381436-41381455 | MsG0380013595.01.T01:CDS | 50.0% |
GCTGGTTGAAGACCACCAAC+CGG | - | Chr3:41381451-41381470 | None:intergenic | 55.0% | |
GGTGGTCTTCAACCAGCTGA+TGG | + | Chr3:41381454-41381473 | MsG0380013595.01.T01:CDS | 55.0% | |
TCCCAAATGGGAACGGGTGT+TGG | - | Chr3:41381373-41381392 | None:intergenic | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr3 | gene | 41381127 | 41381969 | 41381127 | ID=MsG0380013595.01;Name=MsG0380013595.01 |
Chr3 | mRNA | 41381127 | 41381969 | 41381127 | ID=MsG0380013595.01.T01;Parent=MsG0380013595.01;Name=MsG0380013595.01.T01;_AED=0.50;_eAED=0.50;_QI=0|-1|0|1|-1|1|1|0|280 |
Chr3 | exon | 41381127 | 41381969 | 41381127 | ID=MsG0380013595.01.T01:exon:22510;Parent=MsG0380013595.01.T01 |
Chr3 | CDS | 41381127 | 41381969 | 41381127 | ID=MsG0380013595.01.T01:cds;Parent=MsG0380013595.01.T01 |
Gene Sequence |
Protein sequence |