AlfalfaGEDB | MsG0180005082.01

M. sativa cultivar ZhongmuNo.1 / MsG0180005082.01

KEGG: -
GO: GO:0030246
PFAM: PF00139

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180005082.01.T01	XP_003599063.1	81.618	272	46	2	1	270	1	270	4.10E-152	436

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180005082.01.T01	Q40987	58.456	272	102	6	1	270	1	263	8.87E-95	283

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180005082.01.T01	G7J1U2	81.618	272	46	2	1	270	1	270	1.96e-152	436

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0180000942.01	MsG0180005082.01	-0.802502	5.442001e-49	2.670103e-46
MsG0180003320.01	MsG0180005082.01	0.805734	1.156856e-49	6.167642e-47
MsG0180005059.01	MsG0180005082.01	0.894393	2.571481e-75	2.551430e-71
MsG0180005060.01	MsG0180005082.01	0.927007	2.138256e-91	1.043536e-86
MsG0180005080.01	MsG0180005082.01	0.863177	2.998678e-64	9.008603e-61
MsG0180005082.01	MsG0180005130.01	0.839529	1.500414e-57	2.077715e-54
MsG0180005082.01	MsG0180005143.01	0.836208	1.070881e-56	1.340484e-53
MsG0180005082.01	MsG0180006195.01	0.800960	1.127561e-48	5.320543e-46
MsG0180005082.01	MsG0280006553.01	-0.803213	3.880417e-49	1.938744e-46
MsG0180005082.01	MsG0280007513.01	0.839704	1.350945e-57	1.880858e-54
MsG0180005082.01	MsG0280007689.01	0.840528	8.236212e-58	1.176508e-54
MsG0180005082.01	MsG0280007910.01	0.825215	5.291758e-54	4.793141e-51
MsG0180005082.01	MsG0280010425.01	0.825623	4.236835e-54	3.882284e-51
MsG0180005082.01	MsG0280011110.01	0.810713	1.005413e-50	6.105285e-48
MsG0180005082.01	MsG0380013212.01	0.833106	6.450113e-56	7.355484e-53
MsG0180005082.01	MsG0380013213.01	0.859264	4.664806e-63	1.224554e-59
MsG0180005082.01	MsG0380013239.01	0.805426	1.342470e-49	7.100196e-47
MsG0180005082.01	MsG0380017901.01	0.801847	7.421371e-49	3.581159e-46
MsG0180005082.01	MsG0480018617.01	0.847089	1.441807e-59	2.534495e-56
MsG0180005082.01	MsG0480018625.01	0.803216	3.875836e-49	1.936592e-46
MsG0180005082.01	MsG0480018692.01	0.823671	1.221576e-53	1.058880e-50
MsG0180005082.01	MsG0480018697.01	0.806851	6.730957e-50	3.692354e-47
MsG0180005082.01	MsG0480019322.01	0.803133	4.031301e-49	2.009975e-46
MsG0180005082.01	MsG0480020285.01	0.825718	4.024002e-54	3.697243e-51
MsG0180005082.01	MsG0480020904.01	0.835177	1.952784e-56	2.369320e-53
MsG0180005082.01	MsG0480021091.01	0.844246	8.511610e-59	1.365841e-55
MsG0180005082.01	MsG0480023406.01	-0.804578	2.020073e-49	1.045311e-46
MsG0180005082.01	MsG0480023432.01	0.806524	7.891170e-50	4.292446e-47
MsG0180005082.01	MsG0580024535.01	0.800376	1.483918e-48	6.898823e-46
MsG0180005082.01	MsG0580025024.01	0.818543	1.855650e-52	1.393090e-49
MsG0180005082.01	MsG0580026521.01	0.808126	3.610267e-50	2.047387e-47
MsG0180005082.01	MsG0580029937.01	0.814927	1.200431e-51	8.161345e-49
MsG0180005082.01	MsG0680030465.01	0.808362	3.214391e-50	1.834379e-47
MsG0180005082.01	MsG0680031200.01	0.805219	1.483928e-49	7.806520e-47
MsG0180005082.01	MsG0680032932.01	0.818657	1.748759e-52	1.316845e-49
MsG0180005082.01	MsG0680034238.01	0.838833	2.274059e-57	3.082638e-54
MsG0180005082.01	MsG0680034391.01	0.836997	6.738828e-57	8.636680e-54
MsG0180005082.01	MsG0680034974.01	0.814604	1.415411e-51	9.540109e-49
MsG0180005082.01	MsG0780036259.01	0.814232	1.711049e-51	1.141697e-48
MsG0180005082.01	MsG0780036260.01	0.876309	1.547149e-68	7.464777e-65
MsG0180005082.01	MsG0780036376.01	0.802944	4.410759e-49	2.188592e-46
MsG0180005082.01	MsG0780036835.01	0.842842	2.019642e-58	3.100987e-55
MsG0180005082.01	MsG0780038318.01	0.815689	8.130011e-52	5.644092e-49
MsG0180005082.01	MsG0780038657.01	0.805084	1.583166e-49	8.300037e-47
MsG0180005082.01	MsG0780039686.01	0.846260	2.429039e-59	4.156616e-56
MsG0180005082.01	MsG0780040716.01	0.812226	4.715984e-51	2.981590e-48
MsG0180005082.01	MsG0780041385.01	-0.801940	7.102611e-49	3.435270e-46
MsG0180005082.01	MsG0880042256.01	-0.810969	8.848325e-51	5.410306e-48
MsG0180005082.01	MsG0880042416.01	-0.809124	2.209056e-50	1.286230e-47
MsG0180005082.01	MsG0880042642.01	0.839084	1.957439e-57	2.673902e-54
MsG0180005082.01	MsG0880043107.01	-0.814043	1.883181e-51	1.250148e-48
MsG0180005082.01	MsG0880045801.01	0.824462	7.966677e-54	7.061050e-51
MsG0180005082.01	MsG0880046434.01	0.827283	1.703730e-54	1.637473e-51
MsG0180005082.01	MsG0880046946.01	0.864014	1.648621e-64	5.099452e-61
MsG0180005082.01	MsG0880047259.01	0.812224	4.722260e-51	2.985366e-48

PPI

Gene1	Gene2	Type
MsG0580025592.01	MsG0180005082.01	PPI
MsG0880042846.01	MsG0180005082.01	PPI
MsG0180005082.01	MsG0380014744.01	PPI
MsG0380014272.01	MsG0180005082.01	PPI
MsG0180005060.01	MsG0180005082.01	PPI
MsG0180005082.01	MsG0180005080.01	PPI
MsG0180005082.01	MsG0180004091.01	PPI
MsG0380014748.01	MsG0180005082.01	PPI
MsG0180005082.01	MsG0880045216.01	PPI
MsG0180004091.01	MsG0180005082.01	PPI
MsG0180005082.01	MsG0580025592.01	PPI
MsG0180005082.01	MsG0180004091.01	PPI
MsG0180005059.01	MsG0180005082.01	PPI
MsG0580025591.01	MsG0180005082.01	PPI
MsG0380013594.01	MsG0180005082.01	PPI
MsG0380014275.01	MsG0180005082.01	PPI
MsG0180005082.01	MsG0880045217.01	PPI
MsG0180005082.01	MsG0580025598.01	PPI
MsG0180004091.01	MsG0180005082.01	PPI
MsG0880045216.01	MsG0180005082.01	PPI
MsG0180005082.01	MsG0880045214.01	PPI
MsG0180004091.01	MsG0180005082.01	PPI
MsG0180005082.01	MsG0380013593.01	PPI
MsG0180005082.01	MsG0180005059.01	PPI
MsG0180004091.01	MsG0180005082.01	PPI
MsG0380013595.01	MsG0180005082.01	PPI
MsG0180005082.01	MsG0380014275.01	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180005082.01.T01	MTR_3g027280	81.618	272	46	2	1	270	1	270	4.97e-156	436
MsG0180005082.01.T01	MTR_1g090957	79.630	270	43	3	1	270	1	258	6.36e-148	415
MsG0180005082.01.T01	MTR_1g090937	72.694	271	65	5	1	270	1	263	5.48e-135	382
MsG0180005082.01.T01	MTR_1g090930	74.359	273	61	4	1	270	1	267	1.11e-134	382
MsG0180005082.01.T01	MTR_3g054170	49.813	267	111	10	6	265	3	253	1.52e-68	213
MsG0180005082.01.T01	MTR_3g054180	50.186	269	109	10	6	265	7	259	3.10e-67	210
MsG0180005082.01.T01	MTR_1g090973	47.292	277	121	13	1	268	1	261	3.42e-64	202
MsG0180005082.01.T01	MTR_0163s0020	47.826	276	126	8	1	271	2	264	7.76e-64	202
MsG0180005082.01.T01	MTR_0684s0020	47.826	276	126	8	1	271	1	263	8.86e-64	202
MsG0180005082.01.T01	MTR_3g054200	48.134	268	114	10	6	265	3	253	3.42e-61	194
MsG0180005082.01.T01	MTR_1g090943	45.149	268	133	8	1	264	1	258	2.20e-59	191
MsG0180005082.01.T01	MTR_3g047140	45.263	285	136	12	1	278	1	272	3.68e-58	187
MsG0180005082.01.T01	MTR_1g090960	42.908	282	100	10	1	270	1	233	2.00e-51	169
MsG0180005082.01.T01	MTR_8g023510	37.729	273	145	12	1	264	1	257	1.15e-35	129
MsG0180005082.01.T01	MTR_5g031120	39.130	276	124	17	23	265	14	278	1.95e-35	129
MsG0180005082.01.T01	MTR_5g031100	36.364	275	132	14	23	265	14	277	5.07e-33	122
MsG0180005082.01.T01	MTR_8g068040	38.314	261	125	14	23	265	18	260	1.59e-32	120
MsG0180005082.01.T01	MTR_8g068050	36.940	268	138	13	14	265	20	272	6.45e-32	124
MsG0180005082.01.T01	MTR_8g067980	39.823	226	114	11	54	265	41	258	9.57e-32	118
MsG0180005082.01.T01	MTR_5g031160	35.458	251	133	14	34	265	46	286	7.84e-31	117
MsG0180005082.01.T01	MTR_8g068030	36.704	267	125	16	23	265	18	264	3.57e-30	114
MsG0180005082.01.T01	MTR_5g031140	36.364	253	131	14	31	265	45	285	3.76e-30	115
MsG0180005082.01.T01	MTR_8g067940	37.226	274	141	16	15	267	18	281	4.30e-30	114
MsG0180005082.01.T01	MTR_8g067990	37.333	225	119	11	54	264	41	257	2.52e-28	109
MsG0180005082.01.T01	MTR_4g023810	34.979	243	133	12	30	264	27	252	6.30e-28	108
MsG0180005082.01.T01	MTR_3g463370	32.812	256	116	6	18	264	12	220	1.70e-27	107
MsG0180005082.01.T01	MTR_5g031030	36.694	248	135	12	34	267	35	274	7.85e-27	105
MsG0180005082.01.T01	MTR_5g031090	35.200	250	140	11	34	267	32	275	8.34e-27	105
MsG0180005082.01.T01	MTR_8g067960	36.726	226	123	10	54	267	24	241	1.25e-24	99.4
MsG0180005082.01.T01	MTR_4g093080	32.955	264	147	13	18	265	9	258	1.93e-23	100
MsG0180005082.01.T01	MTR_1g014240	33.333	255	138	14	35	270	37	278	2.03e-20	91.3
MsG0180005082.01.T01	MTR_7g115740	32.819	259	144	13	24	265	14	259	2.06e-20	91.3
MsG0180005082.01.T01	MTR_4g093040	32.130	277	153	12	1	259	1	260	1.79e-19	88.6
MsG0180005082.01.T01	MTR_8g067720	31.474	251	144	11	36	265	13	256	8.64e-19	86.7
MsG0180005082.01.T01	MTR_4g093040	35.000	180	102	6	93	259	1	178	1.23e-17	83.2
MsG0180005082.01.T01	MTR_4g056360	28.881	277	138	12	1	264	1	231	5.69e-17	79.0
MsG0180005082.01.T01	MTR_4g056320	33.577	274	125	13	1	264	1	227	6.08e-17	79.0
MsG0180005082.01.T01	MTR_8g067735	30.303	264	156	14	18	265	26	277	7.34e-17	80.9
MsG0180005082.01.T01	MTR_8g067930	30.943	265	154	12	22	270	11	262	1.31e-16	80.1
MsG0180005082.01.T01	MTR_8g067630	32.159	227	129	11	35	248	30	244	1.63e-16	79.7
MsG0180005082.01.T01	MTR_4g093110	31.387	274	144	18	14	265	12	263	5.43e-15	75.5
MsG0180005082.01.T01	MTR_4g093140	30.070	286	156	17	1	265	1	263	1.90e-14	73.6
MsG0180005082.01.T01	MTR_4g093070	29.719	249	140	13	36	265	33	265	6.64e-14	72.0
MsG0180005082.01.T01	MTR_8g067690	32.821	195	114	9	86	265	101	293	3.75e-13	69.7
MsG0180005082.01.T01	MTR_4g056380	38.835	103	59	3	176	275	105	206	1.98e-12	65.5
MsG0180005082.01.T01	MTR_7g115740	33.117	154	87	7	24	170	14	158	2.20e-11	64.3
MsG0180005082.01.T01	MTR_3g007870	28.571	280	164	12	11	277	2	258	9.13e-11	62.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180005082.01.T01	AT5G10530	34.866	261	135	14	23	265	10	253	1.84e-21	94.4
MsG0180005082.01.T01	AT5G65600	32.627	236	135	9	33	253	33	259	7.27e-21	92.8
MsG0180005082.01.T01	AT5G55830	31.496	254	133	13	36	265	31	267	1.02e-13	71.6
MsG0180005082.01.T01	AT4G02410	29.344	259	139	14	31	262	22	263	6.57e-12	66.2

Find 75 sgRNAs with CRISPR-Local

Find 76 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TCCATCAGTTGGAGCGTTTC+CGG	0.208844	1:+86689815	None:intergenic
AATATGGTACCTCATAGATT+TGG	0.272536	1:+86689653	None:intergenic
ATACCAAACCTAACCGTGTT+AGG	0.322699	1:+86689450	None:intergenic
TAACCCCACCCGTGTCCCTT+TGG	0.331370	1:-86689896	MsG0180005082.01.T01:CDS
GAAGGAAATGTCAGAGCATT+AGG	0.331482	1:+86690029	None:intergenic
AATGCTTACAATCAATTTGT+TGG	0.337940	1:-86689711	MsG0180005082.01.T01:CDS
ATATCTGGTGCTTCAGTAAC+TGG	0.354584	1:-86689429	MsG0180005082.01.T01:CDS
AACCCCACCCGTGTCCCTTT+GGG	0.358018	1:-86689895	MsG0180005082.01.T01:CDS
CTCATAGATTTGGGATCATA+AGG	0.359980	1:+86689663	None:intergenic
AACAACACTCAATGTGTTAG+AGG	0.369181	1:+86689536	None:intergenic
AGTTGACGTTGGTTCCAATA+TGG	0.371704	1:+86689637	None:intergenic
AATGCTCTGACATTTCCTTC+TGG	0.381773	1:-86690026	MsG0180005082.01.T01:CDS
TTTCTCTCAAGGTCATGAAA+TGG	0.388433	1:-86689608	MsG0180005082.01.T01:CDS
ACGGTTAGGTTTGGTATATC+TGG	0.392313	1:-86689444	MsG0180005082.01.T01:CDS
AAATCTATGAGGTACCATAT+TGG	0.393883	1:-86689651	MsG0180005082.01.T01:CDS
GATCATAAGGATTGGTATAA+AGG	0.401771	1:+86689676	None:intergenic
AACTCAGAAAGTGCACGTTT+TGG	0.408486	1:-86689750	MsG0180005082.01.T01:CDS
ATATGGTACCTCATAGATTT+GGG	0.415491	1:+86689654	None:intergenic
ATGGTAGAAAATTTGCCATT+GGG	0.420085	1:+86689504	None:intergenic
CTGTACTCCCTAACACGGTT+AGG	0.428279	1:-86689458	MsG0180005082.01.T01:CDS
CTCCCTAACACGGTTAGGTT+TGG	0.429073	1:-86689453	MsG0180005082.01.T01:CDS
TTCTCTCAAGGTCATGAAAT+GGG	0.430289	1:-86689607	MsG0180005082.01.T01:CDS
GACAAAGCTAGCATCATTGC+CGG	0.437316	1:+86689866	None:intergenic
AAGCGTGAGAAAACTCCTTC+AGG	0.438172	1:-86689948	MsG0180005082.01.T01:CDS
ATGCTCAAACGTTAAACAAT+GGG	0.443162	1:-86689986	MsG0180005082.01.T01:CDS
GTCCCAAAGGGACACGGGTG+GGG	0.450544	1:+86689893	None:intergenic
AAACGTGCACTTTCTGAGTT+GGG	0.453097	1:+86689753	None:intergenic
ACTTGGTGAAATTGAAAGAA+AGG	0.469933	1:+86690057	None:intergenic
CAGAGCATTAGGAGTGAACT+TGG	0.474972	1:+86690040	None:intergenic
CTTGGTGAAATTGAAAGAAA+GGG	0.478623	1:+86690058	None:intergenic
AAAACGTGCACTTTCTGAGT+TGG	0.481047	1:+86689752	None:intergenic
ACCGGAAACGCTCCAACTGA+TGG	0.487866	1:-86689816	MsG0180005082.01.T01:CDS
CAAATCAACGATTTGAGCAA+TGG	0.492987	1:+86689485	None:intergenic
GTTAAGATACGACCTGTACT+TGG	0.493996	1:+86689915	None:intergenic
CCTTCTGGTATAACCTTCCA+AGG	0.495247	1:-86690011	MsG0180005082.01.T01:CDS
AATGGTAGAAAATTTGCCAT+TGG	0.495781	1:+86689503	None:intergenic
TCAAGGTCATGAAATGGGAA+TGG	0.510357	1:-86689602	MsG0180005082.01.T01:CDS
AAGTGCTGAATGACCATGAA+TGG	0.510801	1:+86689391	None:intergenic
CAGCACATGACATCCATTCA+TGG	0.511954	1:-86689404	MsG0180005082.01.T01:CDS
TGTCCCAAAGGGACACGGGT+GGG	0.512215	1:+86689892	None:intergenic
TGTGTTAGAGGGAGAGTCAT+AGG	0.513568	1:+86689548	None:intergenic
CAAGGTCATGAAATGGGAAT+GGG	0.518239	1:-86689601	MsG0180005082.01.T01:CDS
GGCAGTGTCCCAAAGGGACA+CGG	0.518402	1:+86689887	None:intergenic
CAACTCTTTAATTTCTCTCA+AGG	0.521126	1:-86689619	MsG0180005082.01.T01:CDS
AAGAACATCAATCCATCAGT+TGG	0.521731	1:+86689804	None:intergenic
GTGTCCCTTTGGGACACTGC+CGG	0.527921	1:-86689885	MsG0180005082.01.T01:CDS
TACCAAACCTAACCGTGTTA+GGG	0.529661	1:+86689451	None:intergenic
GGTCTCTACTACGAATGAAA+AGG	0.540214	1:+86689839	None:intergenic
CGTTTGAGCATCCCCTTGGA+AGG	0.543808	1:+86689998	None:intergenic
AGATTTGGGATCATAAGGAT+TGG	0.548372	1:+86689668	None:intergenic
CTTATGATCCCAAATCTATG+AGG	0.558220	1:-86689662	MsG0180005082.01.T01:CDS
TTAACGTTTGAGCATCCCCT+TGG	0.561443	1:+86689994	None:intergenic
CTTCTGGTATAACCTTCCAA+GGG	0.561608	1:-86690010	MsG0180005082.01.T01:CDS
CATTGCCGGCAGTGTCCCAA+AGG	0.569263	1:+86689880	None:intergenic
GTGTCCCAAAGGGACACGGG+TGG	0.577507	1:+86689891	None:intergenic
GATGCTCAAACGTTAAACAA+TGG	0.578620	1:-86689987	MsG0180005082.01.T01:CDS
TCATTCGTAGTAGAGACCAC+CGG	0.586383	1:-86689834	MsG0180005082.01.T01:CDS
GTTGTTGTCACTTACCCCAA+TGG	0.586471	1:-86689519	MsG0180005082.01.T01:CDS
CCTAAAACGAGTTCATGAGT+TGG	0.586963	1:+86690137	None:intergenic
AGAAATTAAAGAGTTGACGT+TGG	0.590878	1:+86689626	None:intergenic
ATGAAATGGGAATGGGTGAG+TGG	0.593464	1:-86689594	MsG0180005082.01.T01:CDS
TGGTAGAAAATTTGCCATTG+GGG	0.595930	1:+86689505	None:intergenic
GGTACACTTAAACCAAGTAC+AGG	0.597115	1:-86689927	MsG0180005082.01.T01:CDS
CCTTGGAAGGTTATACCAGA+AGG	0.602083	1:+86690011	None:intergenic
GCAGTGTCCCAAAGGGACAC+GGG	0.602408	1:+86689888	None:intergenic
GGTGGAATCACAGTGTCTTG+TGG	0.603572	1:+86689774	None:intergenic
ATCAGTTGGAGCGTTTCCGG+TGG	0.608436	1:+86689818	None:intergenic
CGTGCACTTTCTGAGTTGGG+TGG	0.613896	1:+86689756	None:intergenic
ACAACACTCAATGTGTTAGA+GGG	0.619552	1:+86689537	None:intergenic
ATTGCCGGCAGTGTCCCAAA+GGG	0.621107	1:+86689881	None:intergenic
TATAGCTTGTAACTTGTCTG+AGG	0.638098	1:+86689337	None:intergenic
CTTGGTTTAAGTGTACCTGA+AGG	0.657510	1:+86689933	None:intergenic
GAAAACTGTACTCCCTAACA+CGG	0.659450	1:-86689463	MsG0180005082.01.T01:CDS
TTCTGGTATAACCTTCCAAG+GGG	0.688779	1:-86690009	MsG0180005082.01.T01:CDS
TGCTCAAACGTTAAACAATG+GGG	0.705167	1:-86689985	MsG0180005082.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	AATGCTTACAATCAATTTGT+TGG	-	Chr1:86689782-86689801	MsG0180005082.01.T01:CDS	25.0%
	AATATGGTACCTCATAGATT+TGG	+	Chr1:86689843-86689862	None:intergenic	30.0%
	AATGGTAGAAAATTTGCCAT+TGG	+	Chr1:86689993-86690012	None:intergenic	30.0%
	AGAAATTAAAGAGTTGACGT+TGG	+	Chr1:86689870-86689889	None:intergenic	30.0%
	ATATGGTACCTCATAGATTT+GGG	+	Chr1:86689842-86689861	None:intergenic	30.0%
	ATGCTCAAACGTTAAACAAT+GGG	-	Chr1:86689507-86689526	MsG0180005082.01.T01:CDS	30.0%
	ATGGTAGAAAATTTGCCATT+GGG	+	Chr1:86689992-86690011	None:intergenic	30.0%
	CTTGGTGAAATTGAAAGAAA+GGG	+	Chr1:86689438-86689457	None:intergenic	30.0%
!	AAATCTATGAGGTACCATAT+TGG	-	Chr1:86689842-86689861	MsG0180005082.01.T01:CDS	30.0%
!	ACTTGGTGAAATTGAAAGAA+AGG	+	Chr1:86689439-86689458	None:intergenic	30.0%
!	CAACTCTTTAATTTCTCTCA+AGG	-	Chr1:86689874-86689893	MsG0180005082.01.T01:CDS	30.0%
!	GATCATAAGGATTGGTATAA+AGG	+	Chr1:86689820-86689839	None:intergenic	30.0%
	AACAACACTCAATGTGTTAG+AGG	+	Chr1:86689960-86689979	None:intergenic	35.0%
	AAGAACATCAATCCATCAGT+TGG	+	Chr1:86689692-86689711	None:intergenic	35.0%
	ACAACACTCAATGTGTTAGA+GGG	+	Chr1:86689959-86689978	None:intergenic	35.0%
	CAAATCAACGATTTGAGCAA+TGG	+	Chr1:86690011-86690030	None:intergenic	35.0%
	CTTATGATCCCAAATCTATG+AGG	-	Chr1:86689831-86689850	MsG0180005082.01.T01:CDS	35.0%
	GATGCTCAAACGTTAAACAA+TGG	-	Chr1:86689506-86689525	MsG0180005082.01.T01:CDS	35.0%
	TGCTCAAACGTTAAACAATG+GGG	-	Chr1:86689508-86689527	MsG0180005082.01.T01:CDS	35.0%
	TGGTAGAAAATTTGCCATTG+GGG	+	Chr1:86689991-86690010	None:intergenic	35.0%
	TTCTCTCAAGGTCATGAAAT+GGG	-	Chr1:86689886-86689905	MsG0180005082.01.T01:CDS	35.0%
	TTTCTCTCAAGGTCATGAAA+TGG	-	Chr1:86689885-86689904	MsG0180005082.01.T01:CDS	35.0%
!	AGATTTGGGATCATAAGGAT+TGG	+	Chr1:86689828-86689847	None:intergenic	35.0%
!	CTCATAGATTTGGGATCATA+AGG	+	Chr1:86689833-86689852	None:intergenic	35.0%
!	TATAGCTTGTAACTTGTCTG+AGG	+	Chr1:86690159-86690178	None:intergenic	35.0%
	AAAACGTGCACTTTCTGAGT+TGG	+	Chr1:86689744-86689763	None:intergenic	40.0%
	AAACGTGCACTTTCTGAGTT+GGG	+	Chr1:86689743-86689762	None:intergenic	40.0%
	AATGCTCTGACATTTCCTTC+TGG	-	Chr1:86689467-86689486	MsG0180005082.01.T01:CDS	40.0%
	ATACCAAACCTAACCGTGTT+AGG	+	Chr1:86690046-86690065	None:intergenic	40.0%
	ATATCTGGTGCTTCAGTAAC+TGG	-	Chr1:86690064-86690083	MsG0180005082.01.T01:CDS	40.0%
	CAAGGTCATGAAATGGGAAT+GGG	-	Chr1:86689892-86689911	MsG0180005082.01.T01:CDS	40.0%
	CCTAAAACGAGTTCATGAGT+TGG	+	Chr1:86689359-86689378	None:intergenic	40.0%
	CTTCTGGTATAACCTTCCAA+GGG	-	Chr1:86689483-86689502	MsG0180005082.01.T01:CDS	40.0%
	CTTGGTTTAAGTGTACCTGA+AGG	+	Chr1:86689563-86689582	None:intergenic	40.0%
	GAAAACTGTACTCCCTAACA+CGG	-	Chr1:86690030-86690049	MsG0180005082.01.T01:CDS	40.0%
	GGTACACTTAAACCAAGTAC+AGG	-	Chr1:86689566-86689585	MsG0180005082.01.T01:CDS	40.0%
	GGTCTCTACTACGAATGAAA+AGG	+	Chr1:86689657-86689676	None:intergenic	40.0%
	GTTAAGATACGACCTGTACT+TGG	+	Chr1:86689581-86689600	None:intergenic	40.0%
	TACCAAACCTAACCGTGTTA+GGG	+	Chr1:86690045-86690064	None:intergenic	40.0%
	TCAAGGTCATGAAATGGGAA+TGG	-	Chr1:86689891-86689910	MsG0180005082.01.T01:CDS	40.0%
	TTCTGGTATAACCTTCCAAG+GGG	-	Chr1:86689484-86689503	MsG0180005082.01.T01:CDS	40.0%
!	ACGGTTAGGTTTGGTATATC+TGG	-	Chr1:86690049-86690068	MsG0180005082.01.T01:CDS	40.0%
!	CCAACTCATGAACTCGTTTT+AGG	-	Chr1:86689356-86689375	MsG0180005082.01.T01:CDS	40.0%
!	GAAGGAAATGTCAGAGCATT+AGG	+	Chr1:86689467-86689486	None:intergenic	40.0%
!!	AACTCAGAAAGTGCACGTTT+TGG	-	Chr1:86689743-86689762	MsG0180005082.01.T01:CDS	40.0%
!!	AAGTGCTGAATGACCATGAA+TGG	+	Chr1:86690105-86690124	None:intergenic	40.0%
!!	AGTTGACGTTGGTTCCAATA+TGG	+	Chr1:86689859-86689878	None:intergenic	40.0%
	AAGCGTGAGAAAACTCCTTC+AGG	-	Chr1:86689545-86689564	MsG0180005082.01.T01:CDS	45.0%
	ATGAAATGGGAATGGGTGAG+TGG	-	Chr1:86689899-86689918	MsG0180005082.01.T01:CDS	45.0%
	CAGCACATGACATCCATTCA+TGG	-	Chr1:86690089-86690108	MsG0180005082.01.T01:CDS	45.0%
	CCTTCTGGTATAACCTTCCA+AGG	-	Chr1:86689482-86689501	MsG0180005082.01.T01:CDS	45.0%
	CCTTGGAAGGTTATACCAGA+AGG	+	Chr1:86689485-86689504	None:intergenic	45.0%
	GACAAAGCTAGCATCATTGC+CGG	+	Chr1:86689630-86689649	None:intergenic	45.0%
	TCATTCGTAGTAGAGACCAC+CGG	-	Chr1:86689659-86689678	MsG0180005082.01.T01:CDS	45.0%
	TGTGTTAGAGGGAGAGTCAT+AGG	+	Chr1:86689948-86689967	None:intergenic	45.0%
	TTAACGTTTGAGCATCCCCT+TGG	+	Chr1:86689502-86689521	None:intergenic	45.0%
!	CAGAGCATTAGGAGTGAACT+TGG	+	Chr1:86689456-86689475	None:intergenic	45.0%
!	GTTGTTGTCACTTACCCCAA+TGG	-	Chr1:86689974-86689993	MsG0180005082.01.T01:CDS	45.0%
	CTCCCTAACACGGTTAGGTT+TGG	-	Chr1:86690040-86690059	MsG0180005082.01.T01:CDS	50.0%
	CTGTACTCCCTAACACGGTT+AGG	-	Chr1:86690035-86690054	MsG0180005082.01.T01:CDS	50.0%
	GGTGGAATCACAGTGTCTTG+TGG	+	Chr1:86689722-86689741	None:intergenic	50.0%
!	TCCATCAGTTGGAGCGTTTC+CGG	+	Chr1:86689681-86689700	None:intergenic	50.0%
	ACCGGAAACGCTCCAACTGA+TGG	-	Chr1:86689677-86689696	MsG0180005082.01.T01:CDS	55.0%
	ATTGCCGGCAGTGTCCCAAA+GGG	+	Chr1:86689615-86689634	None:intergenic	55.0%
	CGTTTGAGCATCCCCTTGGA+AGG	+	Chr1:86689498-86689517	None:intergenic	55.0%
!	ATCAGTTGGAGCGTTTCCGG+TGG	+	Chr1:86689678-86689697	None:intergenic	55.0%
!	CGTGCACTTTCTGAGTTGGG+TGG	+	Chr1:86689740-86689759	None:intergenic	55.0%
	AACCCCACCCGTGTCCCTTT+GGG	-	Chr1:86689598-86689617	MsG0180005082.01.T01:CDS	60.0%
	CATTGCCGGCAGTGTCCCAA+AGG	+	Chr1:86689616-86689635	None:intergenic	60.0%
	GCAGTGTCCCAAAGGGACAC+GGG	+	Chr1:86689608-86689627	None:intergenic	60.0%
	GGCAGTGTCCCAAAGGGACA+CGG	+	Chr1:86689609-86689628	None:intergenic	60.0%
	TAACCCCACCCGTGTCCCTT+TGG	-	Chr1:86689597-86689616	MsG0180005082.01.T01:CDS	60.0%
	TGTCCCAAAGGGACACGGGT+GGG	+	Chr1:86689604-86689623	None:intergenic	60.0%
!!	GTGTCCCTTTGGGACACTGC+CGG	-	Chr1:86689608-86689627	MsG0180005082.01.T01:CDS	60.0%
	GTCCCAAAGGGACACGGGTG+GGG	+	Chr1:86689603-86689622	None:intergenic	65.0%
	GTGTCCCAAAGGGACACGGG+TGG	+	Chr1:86689605-86689624	None:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
Chr1	gene	86689332	86690183	86689332	ID=MsG0180005082.01;Name=MsG0180005082.01
Chr1	mRNA	86689332	86690183	86689332	ID=MsG0180005082.01.T01;Parent=MsG0180005082.01;Name=MsG0180005082.01.T01;_AED=0.34;_eAED=0.34;_QI=0\|-1\|0\|1\|-1\|1\|1\|0\|283
Chr1	exon	86689332	86690183	86689332	ID=MsG0180005082.01.T01:exon:16895;Parent=MsG0180005082.01.T01
Chr1	CDS	86689332	86690183	86689332	ID=MsG0180005082.01.T01:cds;Parent=MsG0180005082.01.T01

Gene Sequence

>MsG0180005082.01.T01

ATGGCTTTTTATCGCACAAATCTTCCAACTCATGAACTCGTTTTAGGCATAATATACACAACTTTCTTTCTCTTGCTAGCTACAAATATAAACTCAGTACAAGCCCTTTCTTTCAATTTCACCAAGTTCACTCCTAATGCTCTGACATTTCCTTCTGGTATAACCTTCCAAGGGGATGCTCAAACGTTAAACAATGGGGTCATCGCACTGACTAAGCGTGAGAAAACTCCTTCAGGTACACTTAAACCAAGTACAGGTCGTATCTTAACCCCACCCGTGTCCCTTTGGGACACTGCCGGCAATGATGCTAGCTTTGTCACTTCCTTTTCATTCGTAGTAGAGACCACCGGAAACGCTCCAACTGATGGATTGATGTTCTTTATTGCACCACAAGACACTGTGATTCCACCCAACTCAGAAAGTGCACGTTTTGGAGTAGTTGATTCAAAAAATGCTTACAATCAATTTGTTGGTGTAGAGTTTGACCTTTATACCAATCCTTATGATCCCAAATCTATGAGGTACCATATTGGAACCAACGTCAACTCTTTAATTTCTCTCAAGGTCATGAAATGGGAATGGGTGAGTGGATCATTGAATGAAGTAAGTATAGCCTATGACTCTCCCTCTAACACATTGAGTGTTGTTGTCACTTACCCCAATGGCAAATTTTCTACCATTGCTCAAATCGTTGATTTGAAAACTGTACTCCCTAACACGGTTAGGTTTGGTATATCTGGTGCTTCAGTAACTGGTACAGCACATGACATCCATTCATGGTCATTCAGCACTTCAAACTTGAAAACAACTATATATAAGCAGCGCCTCAGACAAGTTACAAGCTATATATGA

Protein sequence

>MsG0180005082.01.T01

MAFYRTNLPTHELVLGIIYTTFFLLLATNINSVQALSFNFTKFTPNALTFPSGITFQGDAQTLNNGVIALTKREKTPSGTLKPSTGRILTPPVSLWDTAGNDASFVTSFSFVVETTGNAPTDGLMFFIAPQDTVIPPNSESARFGVVDSKNAYNQFVGVEFDLYTNPYDPKSMRYHIGTNVNSLISLKVMKWEWVSGSLNEVSIAYDSPSNTLSVVVTYPNGKFSTIAQIVDLKTVLPNTVRFGISGASVTGTAHDIHSWSFSTSNLKTTIYKQRLRQVTSYI*