Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0380013594.01.T01 | XP_003599808.2 | 75.801 | 281 | 36 | 2 | 1 | 249 | 1 | 281 | 6.19E-142 | 409 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0380013594.01.T01 | Q41160 | 49.219 | 256 | 95 | 4 | 13 | 235 | 8 | 261 | 5.21E-70 | 219 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0380013594.01.T01 | G7IXH3 | 75.801 | 281 | 36 | 2 | 1 | 249 | 1 | 281 | 2.96e-142 | 409 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0380013594.01 | MsG0380013595.01 | 0.888604 | 5.094562e-73 | 3.973684e-69 |
PPI
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0380013594.01.T01 | MTR_3g047140 | 75.801 | 281 | 36 | 2 | 1 | 249 | 1 | 281 | 7.49e-146 | 409 |
MsG0380013594.01.T01 | MTR_0684s0020 | 60.000 | 275 | 80 | 1 | 1 | 245 | 1 | 275 | 8.22e-100 | 292 |
MsG0380013594.01.T01 | MTR_0163s0020 | 60.000 | 275 | 80 | 1 | 1 | 245 | 2 | 276 | 8.22e-100 | 292 |
MsG0380013594.01.T01 | MTR_1g090973 | 49.425 | 261 | 99 | 3 | 1 | 229 | 1 | 260 | 1.66e-74 | 228 |
MsG0380013594.01.T01 | MTR_3g054170 | 49.597 | 248 | 96 | 1 | 11 | 229 | 7 | 254 | 4.58e-73 | 223 |
MsG0380013594.01.T01 | MTR_1g090960 | 49.430 | 263 | 85 | 5 | 1 | 237 | 1 | 241 | 2.37e-70 | 216 |
MsG0380013594.01.T01 | MTR_3g054200 | 48.178 | 247 | 99 | 1 | 12 | 229 | 8 | 254 | 6.51e-69 | 213 |
MsG0380013594.01.T01 | MTR_3g054180 | 49.398 | 249 | 95 | 2 | 12 | 229 | 12 | 260 | 7.51e-68 | 210 |
MsG0380013594.01.T01 | MTR_1g090943 | 54.592 | 196 | 83 | 3 | 46 | 237 | 78 | 271 | 1.38e-60 | 192 |
MsG0380013594.01.T01 | MTR_3g027280 | 45.357 | 280 | 101 | 9 | 1 | 235 | 1 | 273 | 2.26e-56 | 182 |
MsG0380013594.01.T01 | MTR_1g090930 | 42.857 | 273 | 115 | 7 | 1 | 235 | 1 | 270 | 4.29e-48 | 160 |
MsG0380013594.01.T01 | MTR_1g090937 | 41.264 | 269 | 121 | 7 | 1 | 235 | 1 | 266 | 1.96e-47 | 158 |
MsG0380013594.01.T01 | MTR_1g090957 | 40.925 | 281 | 104 | 9 | 1 | 237 | 1 | 263 | 5.89e-45 | 152 |
MsG0380013594.01.T01 | MTR_8g068050 | 43.069 | 202 | 104 | 4 | 46 | 237 | 81 | 281 | 6.91e-39 | 143 |
MsG0380013594.01.T01 | MTR_8g068030 | 41.089 | 202 | 99 | 6 | 44 | 227 | 64 | 263 | 7.24e-38 | 134 |
MsG0380013594.01.T01 | MTR_4g023810 | 40.517 | 232 | 125 | 9 | 12 | 235 | 34 | 260 | 2.08e-37 | 132 |
MsG0380013594.01.T01 | MTR_8g068040 | 40.500 | 200 | 105 | 5 | 44 | 230 | 64 | 262 | 1.08e-36 | 130 |
MsG0380013594.01.T01 | MTR_5g031160 | 42.714 | 199 | 100 | 5 | 44 | 229 | 90 | 287 | 1.06e-35 | 128 |
MsG0380013594.01.T01 | MTR_5g031140 | 42.929 | 198 | 97 | 6 | 46 | 229 | 91 | 286 | 4.76e-35 | 127 |
MsG0380013594.01.T01 | MTR_5g031100 | 42.640 | 197 | 98 | 6 | 46 | 229 | 84 | 278 | 1.90e-34 | 125 |
MsG0380013594.01.T01 | MTR_8g023510 | 43.684 | 190 | 98 | 7 | 46 | 229 | 73 | 259 | 7.22e-34 | 123 |
MsG0380013594.01.T01 | MTR_5g031120 | 42.132 | 197 | 100 | 5 | 46 | 229 | 84 | 279 | 9.24e-34 | 123 |
MsG0380013594.01.T01 | MTR_8g067980 | 41.538 | 195 | 100 | 9 | 43 | 227 | 67 | 257 | 3.97e-32 | 118 |
MsG0380013594.01.T01 | MTR_8g067990 | 40.513 | 195 | 102 | 7 | 43 | 227 | 67 | 257 | 1.28e-31 | 117 |
MsG0380013594.01.T01 | MTR_4g093080 | 37.438 | 203 | 113 | 5 | 46 | 236 | 66 | 266 | 1.71e-30 | 119 |
MsG0380013594.01.T01 | MTR_5g031090 | 38.191 | 199 | 107 | 6 | 46 | 229 | 78 | 275 | 7.05e-29 | 110 |
MsG0380013594.01.T01 | MTR_8g067960 | 38.579 | 197 | 106 | 6 | 43 | 229 | 50 | 241 | 8.91e-29 | 109 |
MsG0380013594.01.T01 | MTR_4g093140 | 32.453 | 265 | 134 | 10 | 4 | 229 | 6 | 264 | 2.83e-28 | 113 |
MsG0380013594.01.T01 | MTR_8g067940 | 37.864 | 206 | 110 | 8 | 39 | 227 | 75 | 279 | 4.21e-28 | 108 |
MsG0380013594.01.T01 | MTR_7g115740 | 35.000 | 200 | 116 | 6 | 43 | 230 | 64 | 261 | 4.71e-28 | 112 |
MsG0380013594.01.T01 | MTR_5g031030 | 40.437 | 183 | 97 | 6 | 58 | 229 | 93 | 274 | 2.99e-27 | 106 |
MsG0380013594.01.T01 | MTR_1g014240 | 35.545 | 211 | 121 | 5 | 46 | 242 | 79 | 288 | 3.61e-27 | 110 |
MsG0380013594.01.T01 | MTR_8g067735 | 35.426 | 223 | 126 | 8 | 33 | 239 | 68 | 288 | 1.47e-26 | 108 |
MsG0380013594.01.T01 | MTR_7g116130 | 35.407 | 209 | 118 | 8 | 37 | 232 | 60 | 264 | 3.49e-26 | 107 |
MsG0380013594.01.T01 | MTR_4g093040 | 38.462 | 182 | 97 | 6 | 43 | 210 | 72 | 252 | 4.50e-25 | 103 |
MsG0380013594.01.T01 | MTR_4g093110 | 31.061 | 264 | 139 | 9 | 4 | 229 | 6 | 264 | 1.07e-24 | 102 |
MsG0380013594.01.T01 | MTR_4g093040 | 39.645 | 169 | 87 | 6 | 56 | 210 | 3 | 170 | 5.21e-24 | 100 |
MsG0380013594.01.T01 | MTR_3g463370 | 35.000 | 240 | 134 | 7 | 11 | 240 | 6 | 233 | 7.42e-24 | 96.3 |
MsG0380013594.01.T01 | MTR_4g093070 | 35.204 | 196 | 114 | 4 | 46 | 229 | 72 | 266 | 1.32e-23 | 99.8 |
MsG0380013594.01.T01 | MTR_4g056320 | 33.333 | 264 | 101 | 10 | 8 | 235 | 11 | 235 | 4.21e-23 | 94.7 |
MsG0380013594.01.T01 | MTR_8g067630 | 35.025 | 197 | 113 | 6 | 33 | 216 | 55 | 249 | 8.52e-23 | 97.4 |
MsG0380013594.01.T01 | MTR_8g067930 | 34.804 | 204 | 118 | 7 | 46 | 236 | 65 | 266 | 1.84e-22 | 96.3 |
MsG0380013594.01.T01 | MTR_8g067720 | 32.599 | 227 | 136 | 8 | 33 | 246 | 49 | 271 | 1.55e-21 | 93.6 |
MsG0380013594.01.T01 | MTR_8g067690 | 33.491 | 212 | 126 | 7 | 32 | 229 | 84 | 294 | 6.49e-20 | 89.0 |
MsG0380013594.01.T01 | MTR_5g025020 | 30.841 | 214 | 120 | 7 | 45 | 240 | 87 | 290 | 2.95e-19 | 87.0 |
MsG0380013594.01.T01 | MTR_4g093050 | 29.353 | 201 | 114 | 7 | 46 | 227 | 73 | 264 | 3.20e-17 | 80.9 |
MsG0380013594.01.T01 | MTR_1g048360 | 31.443 | 194 | 116 | 6 | 46 | 228 | 74 | 261 | 1.04e-15 | 76.6 |
MsG0380013594.01.T01 | MTR_5g068770 | 29.596 | 223 | 126 | 9 | 32 | 227 | 59 | 277 | 1.76e-13 | 70.1 |
MsG0380013594.01.T01 | MTR_7g062940 | 31.000 | 200 | 114 | 9 | 48 | 226 | 60 | 256 | 6.38e-13 | 68.2 |
MsG0380013594.01.T01 | MTR_7g115740 | 35.644 | 101 | 59 | 3 | 43 | 138 | 64 | 163 | 1.08e-12 | 67.8 |
MsG0380013594.01.T01 | MTR_5g077100 | 32.143 | 196 | 116 | 7 | 45 | 231 | 67 | 254 | 6.25e-12 | 65.5 |
MsG0380013594.01.T01 | MTR_2g090410 | 35.714 | 112 | 65 | 4 | 43 | 148 | 55 | 165 | 9.93e-12 | 65.1 |
MsG0380013594.01.T01 | MTR_7g062890 | 30.622 | 209 | 116 | 10 | 42 | 226 | 54 | 257 | 1.96e-11 | 63.9 |
MsG0380013594.01.T01 | MTR_2g090250 | 26.047 | 215 | 134 | 7 | 30 | 225 | 51 | 259 | 2.76e-11 | 63.5 |
MsG0380013594.01.T01 | MTR_7g063010 | 30.653 | 199 | 118 | 8 | 46 | 226 | 61 | 257 | 3.52e-11 | 63.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0380013594.01.T01 | AT5G65600 | 35.714 | 196 | 110 | 6 | 31 | 210 | 60 | 255 | 2.17e-23 | 99.0 |
MsG0380013594.01.T01 | AT5G10530 | 36.220 | 254 | 124 | 14 | 10 | 230 | 7 | 255 | 5.87e-23 | 97.8 |
MsG0380013594.01.T01 | AT4G29050 | 29.469 | 207 | 123 | 7 | 41 | 226 | 69 | 273 | 5.15e-15 | 74.7 |
MsG0380013594.01.T01 | AT4G29050 | 29.469 | 207 | 123 | 7 | 41 | 226 | 55 | 259 | 5.51e-15 | 74.3 |
MsG0380013594.01.T01 | AT5G55830 | 31.718 | 227 | 124 | 11 | 44 | 246 | 68 | 287 | 1.27e-14 | 73.6 |
MsG0380013594.01.T01 | AT5G03140 | 30.688 | 189 | 119 | 6 | 44 | 223 | 72 | 257 | 1.14e-13 | 70.5 |
MsG0380013594.01.T01 | AT4G04960 | 28.643 | 199 | 123 | 6 | 43 | 223 | 56 | 253 | 1.28e-12 | 67.4 |
MsG0380013594.01.T01 | AT4G04960 | 28.643 | 199 | 123 | 6 | 43 | 223 | 56 | 253 | 1.95e-12 | 67.0 |
MsG0380013594.01.T01 | AT4G02410 | 30.000 | 210 | 121 | 9 | 44 | 231 | 64 | 269 | 8.90e-11 | 62.0 |
Find 40 sgRNAs with CRISPR-Local
Find 59 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTCTTAGGAATCACACTATT+TGG | 0.202064 | 3:-41374617 | None:intergenic |
ATACCAACGCTAACTGTTTC+TGG | 0.220985 | 3:-41374932 | None:intergenic |
GATCCTAACAATGCACATAT+TGG | 0.297717 | 3:+41374731 | MsG0380013594.01.T01:CDS |
GGGACATGGAAAACAGAAAT+TGG | 0.305299 | 3:+41374788 | MsG0380013594.01.T01:CDS |
ACACAAAGGAAAATAGTTTC+TGG | 0.315222 | 3:-41374266 | None:intergenic |
TCTCCACCATGTGTGTTCTT+AGG | 0.322895 | 3:-41374632 | None:intergenic |
GGGAACGGGTGTTGGATATA+AGG | 0.323393 | 3:-41374480 | None:intergenic |
ATCCAACACCCGTTCCCATT+TGG | 0.326894 | 3:+41374486 | MsG0380013594.01.T01:CDS |
TCTTTAATTTCATCCAAGAT+AGG | 0.332334 | 3:+41374767 | MsG0380013594.01.T01:CDS |
TTGATAATTATCACAATGAA+TGG | 0.357039 | 3:+41374708 | MsG0380013594.01.T01:CDS |
GAACACACATGGTGGAGATC+TGG | 0.367028 | 3:+41374637 | MsG0380013594.01.T01:CDS |
TCCAACACCCGTTCCCATTT+GGG | 0.369296 | 3:+41374487 | MsG0380013594.01.T01:CDS |
ACCGCTTTCAATCAATTTGT+TGG | 0.409746 | 3:+41374677 | MsG0380013594.01.T01:CDS |
ATCCTAACAATGCACATATT+GGG | 0.411998 | 3:+41374732 | MsG0380013594.01.T01:CDS |
TCCCAAATGGGAACGGGTGT+TGG | 0.421568 | 3:-41374488 | None:intergenic |
CCCATTTGGGATAAAACAAC+TGG | 0.423041 | 3:+41374500 | MsG0380013594.01.T01:CDS |
GAAAATAGTTTCTGGTTATG+TGG | 0.433314 | 3:-41374258 | None:intergenic |
GTTTCTCTCATTGATGAGCT+TGG | 0.446561 | 3:+41374863 | MsG0380013594.01.T01:CDS |
ATCCCAATATGTGCATTGTT+AGG | 0.450564 | 3:-41374734 | None:intergenic |
CTCAGTTGCAAGCAAGAGAA+AGG | 0.475267 | 3:-41374307 | None:intergenic |
GGTGGTCTTCAACCAGCTGA+TGG | 0.478343 | 3:+41374572 | MsG0380013594.01.T01:CDS |
TGATAATTATCACAATGAAT+GGG | 0.484393 | 3:+41374709 | MsG0380013594.01.T01:CDS |
AACACACATGGTGGAGATCT+GGG | 0.502642 | 3:+41374638 | MsG0380013594.01.T01:CDS |
CTTTAATTTCATCCAAGATA+GGG | 0.502694 | 3:+41374768 | MsG0380013594.01.T01:CDS |
TTAGGAATCACACTATTTGG+TGG | 0.526107 | 3:-41374614 | None:intergenic |
GCTGGTTGAAGACCACCAAC+CGG | 0.528758 | 3:-41374566 | None:intergenic |
GACTTAGCTGAGTACACCTC+TGG | 0.546275 | 3:+41374360 | MsG0380013594.01.T01:CDS |
GTGGTGCAAGAAAGAAGATA+AGG | 0.570237 | 3:-41374595 | None:intergenic |
GTGGACCATATCAACTCATA+CGG | 0.574991 | 3:-41375075 | None:intergenic |
ACCAACAAATTGATTGAAAG+CGG | 0.579038 | 3:-41374678 | None:intergenic |
CTTCCAGAAACAGTTAGCGT+TGG | 0.583927 | 3:+41374929 | MsG0380013594.01.T01:CDS |
AAGAAGATAAGGCCATCAGC+TGG | 0.583975 | 3:-41374584 | None:intergenic |
TTGACGTTGTTCAAATGATG+TGG | 0.619970 | 3:-41374963 | None:intergenic |
TTTCATCCAAGATAGGGACA+TGG | 0.631840 | 3:+41374774 | MsG0380013594.01.T01:CDS |
AAATACATGTCATTGAAACA+TGG | 0.641886 | 3:+41374984 | MsG0380013594.01.T01:CDS |
CGGGTGTTGGATATAAGGCA+CGG | 0.656236 | 3:-41374475 | None:intergenic |
GGTGTACTCAGCTAAGTCGA+AGG | 0.656926 | 3:-41374355 | None:intergenic |
TGTAAAGATGACCAACACAA+AGG | 0.670119 | 3:-41374280 | None:intergenic |
ATTCCTAAGAACACACATGG+TGG | 0.680802 | 3:+41374629 | MsG0380013594.01.T01:CDS |
GTGATTCCTAAGAACACACA+TGG | 0.690560 | 3:+41374626 | MsG0380013594.01.T01:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TGATAATTATCACAATGAAT+GGG | + | Chr3:41374709-41374728 | MsG0380013594.01.T01:CDS | 20.0% |
!!! | TTGATAATTATCACAATGAA+TGG | + | Chr3:41374708-41374727 | MsG0380013594.01.T01:CDS | 20.0% |
! | AAAAAAAACTAACCCTTCAA+GGG | + | Chr3:41374384-41374403 | MsG0380013594.01.T01:intron | 25.0% |
! | AAATACATGTCATTGAAACA+TGG | + | Chr3:41374984-41375003 | MsG0380013594.01.T01:CDS | 25.0% |
! | ACTCATTAAAGAAAATCACT+TGG | + | Chr3:41374412-41374431 | MsG0380013594.01.T01:intron | 25.0% |
! | TAAAAAAAACTAACCCTTCA+AGG | + | Chr3:41374383-41374402 | MsG0380013594.01.T01:intron | 25.0% |
!! | CTTTAATTTCATCCAAGATA+GGG | + | Chr3:41374768-41374787 | MsG0380013594.01.T01:CDS | 25.0% |
!! | TCTTTAATTTCATCCAAGAT+AGG | + | Chr3:41374767-41374786 | MsG0380013594.01.T01:CDS | 25.0% |
ACACAAAGGAAAATAGTTTC+TGG | - | Chr3:41374269-41374288 | None:intergenic | 30.0% | |
ACCAACAAATTGATTGAAAG+CGG | - | Chr3:41374681-41374700 | None:intergenic | 30.0% | |
ATCCTAACAATGCACATATT+GGG | + | Chr3:41374732-41374751 | MsG0380013594.01.T01:CDS | 30.0% | |
TTCTTAGGAATCACACTATT+TGG | - | Chr3:41374620-41374639 | None:intergenic | 30.0% | |
! | GAAACTATTTTCCTTTGTGT+TGG | + | Chr3:41374269-41374288 | MsG0380013594.01.T01:CDS | 30.0% |
!! | GAAAATAGTTTCTGGTTATG+TGG | - | Chr3:41374261-41374280 | None:intergenic | 30.0% |
ACCGCTTTCAATCAATTTGT+TGG | + | Chr3:41374677-41374696 | MsG0380013594.01.T01:CDS | 35.0% | |
ATCCCAATATGTGCATTGTT+AGG | - | Chr3:41374737-41374756 | None:intergenic | 35.0% | |
GATCCTAACAATGCACATAT+TGG | + | Chr3:41374731-41374750 | MsG0380013594.01.T01:CDS | 35.0% | |
TGTAAAGATGACCAACACAA+AGG | - | Chr3:41374283-41374302 | None:intergenic | 35.0% | |
TTAGGAATCACACTATTTGG+TGG | - | Chr3:41374617-41374636 | None:intergenic | 35.0% | |
TTGACGTTGTTCAAATGATG+TGG | - | Chr3:41374966-41374985 | None:intergenic | 35.0% | |
! | TGTTTTATCCCAAATGGGAA+CGG | - | Chr3:41374498-41374517 | None:intergenic | 35.0% |
!! | CCAGTTGTTTTATCCCAAAT+GGG | - | Chr3:41374503-41374522 | None:intergenic | 35.0% |
!!! | GGGTTAGTTTTTTTTACCAG+AGG | - | Chr3:41374379-41374398 | None:intergenic | 35.0% |
AATGAGTGCATTCCCTTGAA+GGG | - | Chr3:41374399-41374418 | None:intergenic | 40.0% | |
ATAAGGGTCATCTTGAATGC+TGG | - | Chr3:41374444-41374463 | None:intergenic | 40.0% | |
ATACCAACGCTAACTGTTTC+TGG | - | Chr3:41374935-41374954 | None:intergenic | 40.0% | |
ATTCCTAAGAACACACATGG+TGG | + | Chr3:41374629-41374648 | MsG0380013594.01.T01:CDS | 40.0% | |
GATGACCCTTATACGATTGT+AGG | + | Chr3:41374452-41374471 | MsG0380013594.01.T01:intron | 40.0% | |
GGGACATGGAAAACAGAAAT+TGG | + | Chr3:41374788-41374807 | MsG0380013594.01.T01:CDS | 40.0% | |
GTGATTCCTAAGAACACACA+TGG | + | Chr3:41374626-41374645 | MsG0380013594.01.T01:CDS | 40.0% | |
GTGGTGCAAGAAAGAAGATA+AGG | - | Chr3:41374598-41374617 | None:intergenic | 40.0% | |
GTTTCTCTCATTGATGAGCT+TGG | + | Chr3:41374863-41374882 | MsG0380013594.01.T01:CDS | 40.0% | |
TAATGAGTGCATTCCCTTGA+AGG | - | Chr3:41374400-41374419 | None:intergenic | 40.0% | |
TTTCATCCAAGATAGGGACA+TGG | + | Chr3:41374774-41374793 | MsG0380013594.01.T01:CDS | 40.0% | |
! | CCCATTTGGGATAAAACAAC+TGG | + | Chr3:41374500-41374519 | MsG0380013594.01.T01:CDS | 40.0% |
! | CTTCTCTTTTTCTCTTGTGC+CGG | + | Chr3:41374547-41374566 | MsG0380013594.01.T01:CDS | 40.0% |
! | GTTTTATCCCAAATGGGAAC+GGG | - | Chr3:41374497-41374516 | None:intergenic | 40.0% |
! | TGTTTTCCATGTCCCTATCT+TGG | - | Chr3:41374783-41374802 | None:intergenic | 40.0% |
!! | GCCAGTTGTTTTATCCCAAA+TGG | - | Chr3:41374504-41374523 | None:intergenic | 40.0% |
AAGAAGATAAGGCCATCAGC+TGG | - | Chr3:41374587-41374606 | None:intergenic | 45.0% | |
CACGGCCTACAATCGTATAA+GGG | - | Chr3:41374460-41374479 | None:intergenic | 45.0% | |
CGGCACAAGAGAAAAAGAGA+AGG | - | Chr3:41374549-41374568 | None:intergenic | 45.0% | |
CTCAGTTGCAAGCAAGAGAA+AGG | - | Chr3:41374310-41374329 | None:intergenic | 45.0% | |
CTTCCAGAAACAGTTAGCGT+TGG | + | Chr3:41374929-41374948 | MsG0380013594.01.T01:CDS | 45.0% | |
TCTCCACCATGTGTGTTCTT+AGG | - | Chr3:41374635-41374654 | None:intergenic | 45.0% | |
! | AACACACATGGTGGAGATCT+GGG | + | Chr3:41374638-41374657 | MsG0380013594.01.T01:CDS | 45.0% |
!! | TCTTTTTCTCTTGTGCCGGT+TGG | + | Chr3:41374551-41374570 | MsG0380013594.01.T01:CDS | 45.0% |
ATCCAACACCCGTTCCCATT+TGG | + | Chr3:41374486-41374505 | MsG0380013594.01.T01:CDS | 50.0% | |
GACTTAGCTGAGTACACCTC+TGG | + | Chr3:41374360-41374379 | MsG0380013594.01.T01:CDS | 50.0% | |
GCACGGCCTACAATCGTATA+AGG | - | Chr3:41374461-41374480 | None:intergenic | 50.0% | |
GGTGTACTCAGCTAAGTCGA+AGG | - | Chr3:41374358-41374377 | None:intergenic | 50.0% | |
TCCAACACCCGTTCCCATTT+GGG | + | Chr3:41374487-41374506 | MsG0380013594.01.T01:CDS | 50.0% | |
! | GAACACACATGGTGGAGATC+TGG | + | Chr3:41374637-41374656 | MsG0380013594.01.T01:CDS | 50.0% |
!! | CGGGTGTTGGATATAAGGCA+CGG | - | Chr3:41374478-41374497 | None:intergenic | 50.0% |
!! | GGGAACGGGTGTTGGATATA+AGG | - | Chr3:41374483-41374502 | None:intergenic | 50.0% |
!!! | TTTTCTCTTGTGCCGGTTGG+TGG | + | Chr3:41374554-41374573 | MsG0380013594.01.T01:CDS | 50.0% |
GCTGGTTGAAGACCACCAAC+CGG | - | Chr3:41374569-41374588 | None:intergenic | 55.0% | |
GGTGGTCTTCAACCAGCTGA+TGG | + | Chr3:41374572-41374591 | MsG0380013594.01.T01:CDS | 55.0% | |
TCCCAAATGGGAACGGGTGT+TGG | - | Chr3:41374491-41374510 | None:intergenic | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr3 | gene | 41374246 | 41375087 | 41374246 | ID=MsG0380013594.01;Name=MsG0380013594.01 |
Chr3 | mRNA | 41374246 | 41375087 | 41374246 | ID=MsG0380013594.01.T01;Parent=MsG0380013594.01;Name=MsG0380013594.01.T01;_AED=0.50;_eAED=0.50;_QI=0|0|0|1|1|1|2|0|249 |
Chr3 | exon | 41374246 | 41374381 | 41374246 | ID=MsG0380013594.01.T01:exon:22508;Parent=MsG0380013594.01.T01 |
Chr3 | exon | 41374474 | 41375087 | 41374474 | ID=MsG0380013594.01.T01:exon:22509;Parent=MsG0380013594.01.T01 |
Chr3 | CDS | 41374246 | 41374381 | 41374246 | ID=MsG0380013594.01.T01:cds;Parent=MsG0380013594.01.T01 |
Chr3 | CDS | 41374474 | 41375087 | 41374474 | ID=MsG0380013594.01.T01:cds;Parent=MsG0380013594.01.T01 |
Gene Sequence |
Protein sequence |