AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580027863.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580027863.01.T01 MTR_5g464340 99.315 146 1 0 44 189 170 315 1.33e-105 306
MsG0580027863.01.T01 MTR_5g064340 99.315 146 1 0 44 189 170 315 1.33e-105 306
MsG0580027863.01.T01 MTR_5g064345 99.315 146 1 0 44 189 170 315 3.48e-105 305
MsG0580027863.01.T01 MTR_5g064360 98.630 146 2 0 44 189 171 316 2.26e-104 303
MsG0580027863.01.T01 MTR_3g074890 85.417 144 18 1 46 189 164 304 1.10e-86 257
MsG0580027863.01.T01 MTR_3g074830 82.237 152 26 1 38 189 195 345 3.09e-86 258
MsG0580027863.01.T01 MTR_3g074860 82.993 147 25 0 43 189 158 304 1.97e-85 254
MsG0580027863.01.T01 MTR_4g094240 78.626 131 28 0 59 189 170 300 2.44e-73 223
MsG0580027863.01.T01 MTR_2g009070 70.803 137 40 0 53 189 168 304 8.40e-72 219
MsG0580027863.01.T01 MTR_8g071310 70.588 68 20 0 122 189 18 85 2.77e-28 101
MsG0580027863.01.T01 MTR_8g088900 75.385 65 16 0 125 189 308 372 2.42e-26 103
MsG0580027863.01.T01 MTR_4g013230 74.242 66 14 1 124 189 78 140 7.77e-26 97.1
MsG0580027863.01.T01 MTR_4g033790 40.310 129 74 3 59 186 215 341 1.51e-18 82.0
MsG0580027863.01.T01 MTR_1g076470 40.458 131 74 3 59 186 212 341 1.15e-15 73.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580027863.01.T01 AT4G08950 81.818 143 25 1 48 189 172 314 7.47e-82 245
MsG0580027863.01.T01 AT1G35140 79.851 134 27 0 56 189 176 309 3.78e-78 236
MsG0580027863.01.T01 AT5G64260 60.112 178 66 1 12 189 133 305 1.62e-70 216
MsG0580027863.01.T01 AT5G09440 58.989 178 52 4 12 189 122 278 9.80e-61 190
MsG0580027863.01.T01 AT3G02970 34.615 156 86 1 48 187 175 330 1.39e-27 106
MsG0580027863.01.T01 AT5G51550 42.636 129 71 3 59 186 205 331 3.89e-20 86.3
MsG0580027863.01.T01 AT2G17230 40.458 131 74 3 59 186 228 357 1.03e-16 77.0
MsG0580027863.01.T01 AT2G35150 41.353 133 71 3 59 185 185 316 6.71e-16 74.7

Find 62 sgRNAs with CRISPR-Local

Find 386 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGGCTAGAGCCCAGGCTAGC+TGG 0.151458 5:+69859268 MsG0580027863.01.T01:CDS
CCATTTCACCAACCAATTTA+TGG 0.182864 5:+69859406 MsG0580027863.01.T01:CDS
TCAAGACCCACATCGTTATT+TGG 0.213136 5:-69859454 None:intergenic
GGCTAGAGCCCAGGCTAGCT+GGG 0.229723 5:+69859269 MsG0580027863.01.T01:CDS
TCTTATGGAGCACGCGTAAA+TGG 0.252501 5:+69859313 MsG0580027863.01.T01:CDS
TGGTTATGCTGGGGACCTTT+TGG 0.299405 5:+69859618 MsG0580027863.01.T01:CDS
GCACTTTGTGGACCATAAAT+TGG 0.307975 5:-69859418 None:intergenic
GCTTCCAAAGGAGCTTCTTT+TGG 0.308698 5:-69859553 None:intergenic
ACCGCCCCTAGTTCTTCTTA+TGG 0.345930 5:+69859298 MsG0580027863.01.T01:CDS
GAAACAAGTTCGCGTACATT+TGG 0.347338 5:+69859341 MsG0580027863.01.T01:CDS
AGCTCCTTTGGAAGCTGCTT+CGG 0.362716 5:+69859561 MsG0580027863.01.T01:CDS
AGGACCAAAAGAAGCTCCTT+TGG 0.376105 5:+69859549 MsG0580027863.01.T01:CDS
CCATAAATTGGTTGGTGAAA+TGG 0.381983 5:-69859406 None:intergenic
GCTAGCCTGGGCTCTAGCCC+AGG 0.391211 5:-69859265 None:intergenic
TATAACGCAAATGGTGATAA+TGG 0.393265 5:+69859664 MsG0580027863.01.T01:CDS
TAGAAAGTAGAAGCAGAGCC+TGG 0.398150 5:+69859247 MsG0580027863.01.T01:intron
CCGGTGCCGGAAGTTGTTAC+AGG 0.401644 5:+69854103 MsG0580027863.01.T01:CDS
AATAACGATGTGGGTCTTGA+TGG 0.403310 5:+69859457 MsG0580027863.01.T01:CDS
CAGAGCCTGGGCTAGAGCCC+AGG 0.408604 5:+69859260 MsG0580027863.01.T01:CDS
AAACAAGTTCGCGTACATTT+GGG 0.409022 5:+69859342 MsG0580027863.01.T01:CDS
GACGGTTATGACGGTGGAAA+AGG 0.411430 5:+69854055 None:intergenic
GGAGCTTATCCTGGTTATGC+TGG 0.426719 5:+69859607 MsG0580027863.01.T01:CDS
GGAACCGTGACCAATCCTTT+TGG 0.427628 5:+69859511 MsG0580027863.01.T01:CDS
CCGTCGCCTGTAACAACTTC+CGG 0.440508 5:-69854109 None:intergenic
GCTAGAGCCCAGGCTAGCTG+GGG 0.452682 5:+69859270 MsG0580027863.01.T01:CDS
TGAAAATATCCATTACCAAA+AGG 0.461381 5:-69859526 None:intergenic
GCAACCAATGGTGCACTTTG+TGG 0.466845 5:-69859430 None:intergenic
GAAGCTGCTTCGGCTTGTAC+CGG 0.475241 5:+69859571 MsG0580027863.01.T01:CDS
TGTACCGGTGTTTATGCTAA+AGG 0.481549 5:+69859586 MsG0580027863.01.T01:CDS
CGTGCTCCATAAGAAGAACT+AGG 0.484648 5:-69859304 None:intergenic
AAGTTGGTGAACGCCGGTGC+CGG 0.487077 5:+69854090 MsG0580027863.01.T01:CDS
TATGCTAAAGGAGCTTATCC+TGG 0.497752 5:+69859598 MsG0580027863.01.T01:CDS
TGGTCCACAAAGTGCACCAT+TGG 0.507521 5:+69859426 MsG0580027863.01.T01:CDS
ATATCCATTACCAAAAGGAT+TGG 0.518887 5:-69859521 None:intergenic
TCGTTATTTGGTGCAACCAA+TGG 0.521248 5:-69859442 None:intergenic
CCTGTAACAACTTCCGGCAC+CGG 0.522487 5:-69854103 None:intergenic
GAGCTTATCCTGGTTATGCT+GGG 0.526776 5:+69859608 MsG0580027863.01.T01:CDS
GGTGCTAGCTATAACGCAAA+TGG 0.528973 5:+69859655 MsG0580027863.01.T01:CDS
GTGCTCCATAAGAAGAACTA+GGG 0.529810 5:-69859303 None:intergenic
CTAGAGCCCAGGCTAGCTGG+GGG 0.537975 5:+69859271 MsG0580027863.01.T01:CDS
AATTCTGAAACTCAATGTGC+TGG 0.549654 5:+69859370 MsG0580027863.01.T01:CDS
AACGTCAGCTTGTTCTACAT+TGG 0.554070 5:+69859723 MsG0580027863.01.T01:CDS
AGAAAGTAGAAGCAGAGCCT+GGG 0.555058 5:+69859248 MsG0580027863.01.T01:intron
ACGCAAATGGTGATAATGGA+AGG 0.560708 5:+69859668 MsG0580027863.01.T01:CDS
AAGTTCGCGTACATTTGGGT+TGG 0.562836 5:+69859346 MsG0580027863.01.T01:CDS
AAAAGGTCCCCAGCATAACC+AGG 0.566674 5:-69859616 None:intergenic
AAGGACGACGGTGATGAAGT+TGG 0.581755 5:+69854074 MsG0580027863.01.T01:CDS
CGATGTGGGTCTTGATGGCA+TGG 0.592122 5:+69859462 MsG0580027863.01.T01:CDS
TTTGTGGACCATAAATTGGT+TGG 0.611426 5:-69859414 None:intergenic
CCGGAAGTTGTTACAGGCGA+CGG 0.621892 5:+69854109 MsG0580027863.01.T01:CDS
GGTTGCACCAAATAACGATG+TGG 0.628110 5:+69859447 MsG0580027863.01.T01:CDS
AGCTTATCCTGGTTATGCTG+GGG 0.628401 5:+69859609 MsG0580027863.01.T01:CDS
ATTACCAAAAGGATTGGTCA+CGG 0.640683 5:-69859515 None:intergenic
CAAGCCGAAGCAGCTTCCAA+AGG 0.645366 5:-69859565 None:intergenic
AACTATGACGGTTATGACGG+TGG 0.648032 5:+69854049 None:intergenic
GTTGCACCAAATAACGATGT+GGG 0.661869 5:+69859448 MsG0580027863.01.T01:CDS
TGCTCCATAAGAAGAACTAG+GGG 0.678183 5:-69859302 None:intergenic
TCCATAAGAAGAACTAGGGG+CGG 0.681684 5:-69859299 None:intergenic
AATGTGCTGGTCAATGCGCA+TGG 0.681885 5:+69859383 MsG0580027863.01.T01:CDS
AGCTCCTTTAGCATAAACAC+CGG 0.684494 5:-69859590 None:intergenic
GTGATGAAGTTGGTGAACGC+CGG 0.688449 5:+69854084 MsG0580027863.01.T01:CDS
ATGACGGTGGAAAAGGACGA+CGG 0.760396 5:+69854062 MsG0580027863.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAACAGATTTTATAATTTTA+GGG - Chr5:69856814-69856833 None:intergenic 10.0%
!!! TTAACAGATTTTATAATTTT+AGG - Chr5:69856815-69856834 None:intergenic 10.0%
!! AATTATACATAATTATCTGA+AGG + Chr5:69855188-69855207 MsG0580027863.01.T01:intron 15.0%
!! ACTTAAAAAAACCAAAAAAA+GGG - Chr5:69859194-69859213 None:intergenic 15.0%
!! ATATTGAGCTAATATTAAAT+TGG + Chr5:69854464-69854483 MsG0580027863.01.T01:intron 15.0%
!! ATTATCAGTAATATCTATAT+TGG + Chr5:69854845-69854864 MsG0580027863.01.T01:intron 15.0%
!! TACTTAAAAAAACCAAAAAA+AGG - Chr5:69859195-69859214 None:intergenic 15.0%
!!! CTTTTTATATAGTATTTTGA+TGG - Chr5:69854880-69854899 None:intergenic 15.0%
!!! GTTTTTTTAAGTAGAAAATA+TGG + Chr5:69859202-69859221 MsG0580027863.01.T01:intron 15.0%
!!! TATTATTCAAGTTATTACAT+TGG + Chr5:69858737-69858756 MsG0580027863.01.T01:intron 15.0%
!! AAAAAACTTCATTCATTCAA+AGG - Chr5:69856736-69856755 None:intergenic 20.0%
!! AAAGATTATAGACTATTATG+TGG + Chr5:69854760-69854779 MsG0580027863.01.T01:intron 20.0%
!! AAGATTATAGACTATTATGT+GGG + Chr5:69854761-69854780 MsG0580027863.01.T01:intron 20.0%
!! AATATTAGCTCAATATGTAT+TGG - Chr5:69854460-69854479 None:intergenic 20.0%
!! AATTAACGTGTAAAATAGAA+AGG - Chr5:69857334-69857353 None:intergenic 20.0%
!! AGAATCAACAATTCTAAATT+AGG + Chr5:69858831-69858850 MsG0580027863.01.T01:intron 20.0%
!! CAAATAACAAAGAAAAAACA+TGG + Chr5:69858970-69858989 MsG0580027863.01.T01:intron 20.0%
!! GAATCAACAATTCTAAATTA+GGG + Chr5:69858832-69858851 MsG0580027863.01.T01:intron 20.0%
!!! ACTTTATAATCATTTTGTTG+CGG - Chr5:69855022-69855041 None:intergenic 20.0%
!!! ATTTTTATCTTCACTAGTTT+TGG - Chr5:69855345-69855364 None:intergenic 20.0%
!!! TTGAAATTTAAGTTGTTGAT+CGG - Chr5:69857566-69857585 None:intergenic 20.0%
!!! TTTATATAGTATTTTGATGG+CGG - Chr5:69854877-69854896 None:intergenic 20.0%
! AAAACAAAACCAAATTCCAA+CGG - Chr5:69854169-69854188 None:intergenic 25.0%
! AACAATTCTAAATTAGGGTT+TGG + Chr5:69858837-69858856 MsG0580027863.01.T01:intron 25.0%
! AAGAAACATGAAAATTGTTG+AGG - Chr5:69855678-69855697 None:intergenic 25.0%
! AAGTAGAAAATATGGCTATT+GGG + Chr5:69859210-69859229 MsG0580027863.01.T01:intron 25.0%
! AATACAATCGATTAAGAGTT+GGG - Chr5:69856705-69856724 None:intergenic 25.0%
! ACTTGAATAATAAGCATGTA+AGG - Chr5:69858729-69858748 None:intergenic 25.0%
! AGCAAAGTTTCGAATTTATT+CGG + Chr5:69858626-69858645 MsG0580027863.01.T01:intron 25.0%
! ATAAGGTTCAGAAAACAAAA+GGG - Chr5:69856609-69856628 None:intergenic 25.0%
! ATAATGTACTTATGTTAACG+AGG - Chr5:69854694-69854713 None:intergenic 25.0%
! ATCAATACAGATTTGTCAAT+AGG - Chr5:69854524-69854543 None:intergenic 25.0%
! ATGATTATAAAGTCGATTGA+TGG + Chr5:69855029-69855048 MsG0580027863.01.T01:intron 25.0%
! CATATAAACAAAAGGACAAA+AGG + Chr5:69855163-69855182 MsG0580027863.01.T01:intron 25.0%
! CCAAAGACTCAATATTAAAT+TGG + Chr5:69855111-69855130 MsG0580027863.01.T01:intron 25.0%
! CCAATTTAATATTGAGTCTT+TGG - Chr5:69855114-69855133 None:intergenic 25.0%
! CTGAAATTAACAATTCTCTT+TGG + Chr5:69858795-69858814 MsG0580027863.01.T01:intron 25.0%
! CTTAAATTTCAATACCACAA+AGG + Chr5:69857574-69857593 MsG0580027863.01.T01:intron 25.0%
! CTTTATATACTCTCTATTTG+TGG - Chr5:69855315-69855334 None:intergenic 25.0%
! GAAGAATAATTTACCAACAT+AGG + Chr5:69854372-69854391 MsG0580027863.01.T01:intron 25.0%
! GATGAAATACAATAACAGAA+GGG - Chr5:69855985-69856004 None:intergenic 25.0%
! GATTCATGTGATTTAAGTAT+AGG + Chr5:69855635-69855654 MsG0580027863.01.T01:intron 25.0%
! GGTTTGGAAAATCAAAATTA+GGG + Chr5:69858853-69858872 MsG0580027863.01.T01:intron 25.0%
! TAAACAATAAACATCTCACA+AGG - Chr5:69855855-69855874 None:intergenic 25.0%
! TAAACAGACTAACTATTCTA+AGG - Chr5:69854641-69854660 None:intergenic 25.0%
! TAAGTAGAAAATATGGCTAT+TGG + Chr5:69859209-69859228 MsG0580027863.01.T01:intron 25.0%
! TAATACAATCGATTAAGAGT+TGG - Chr5:69856706-69856725 None:intergenic 25.0%
! TACTTAAATCACATGAATCA+AGG - Chr5:69855634-69855653 None:intergenic 25.0%
! TAGAACAAGTATGAAGTAAA+AGG - Chr5:69857434-69857453 None:intergenic 25.0%
! TAGGTCAAATCTCAATTTAT+GGG + Chr5:69856667-69856686 MsG0580027863.01.T01:intron 25.0%
! TAGTGAAATTGTGAGAAAAA+GGG - Chr5:69857506-69857525 None:intergenic 25.0%
! TAGTTGAAGTCAAATTATGT+AGG - Chr5:69857302-69857321 None:intergenic 25.0%
! TATAAGGTTCAGAAAACAAA+AGG - Chr5:69856610-69856629 None:intergenic 25.0%
! TCAATACAGATTTGTCAATA+GGG - Chr5:69854523-69854542 None:intergenic 25.0%
! TGAAAATATCCATTACCAAA+AGG - Chr5:69859529-69859548 None:intergenic 25.0%
! TGATGAAATACAATAACAGA+AGG - Chr5:69855986-69856005 None:intergenic 25.0%
! TTAACTTAAAAGATGCCATT+TGG - Chr5:69857471-69857490 None:intergenic 25.0%
! TTAGGTCAAATCTCAATTTA+TGG + Chr5:69856666-69856685 MsG0580027863.01.T01:intron 25.0%
! TTGTGTTCCATATAAACAAA+AGG + Chr5:69855155-69855174 MsG0580027863.01.T01:intron 25.0%
!! AACCACTTTGTAGTATTTTT+GGG - Chr5:69858563-69858582 None:intergenic 25.0%
!! AGAAATTGAAGTGTCAAATT+AGG - Chr5:69854320-69854339 None:intergenic 25.0%
!! ATTGACAAATCTGTATTGAT+TGG + Chr5:69854524-69854543 MsG0580027863.01.T01:intron 25.0%
!! GAAATTGAAGTGTCAAATTA+GGG - Chr5:69854319-69854338 None:intergenic 25.0%
!! TAACCACTTTGTAGTATTTT+TGG - Chr5:69858564-69858583 None:intergenic 25.0%
!! TAACTTAAAAGATGCCATTT+GGG - Chr5:69857470-69857489 None:intergenic 25.0%
!! TTTTCTGTGAAAAGTTAAAG+AGG - Chr5:69855946-69855965 None:intergenic 25.0%
!! TTTTGATAGAAGATTGAAAG+TGG + Chr5:69854340-69854359 MsG0580027863.01.T01:intron 25.0%
!!! ACCATGGAAAAGTTTTATTT+GGG + Chr5:69856165-69856184 MsG0580027863.01.T01:intron 25.0%
!!! CTTTTGTCCTTTTGTTTATA+TGG - Chr5:69855165-69855184 None:intergenic 25.0%
!!! TGTTTGCTTTTTGTTATTGT+TGG + Chr5:69856262-69856281 MsG0580027863.01.T01:intron 25.0%
!!! TTATATAGTATTTTGATGGC+GGG - Chr5:69854876-69854895 None:intergenic 25.0%
!!! TTGTTTTTTGGAAGAAGAAA+GGG - Chr5:69857692-69857711 None:intergenic 25.0%
!!! TTTGGTAATGGATATTTTCA+AGG + Chr5:69859529-69859548 MsG0580027863.01.T01:CDS 25.0%
!!! TTTGTTTTTTGGAAGAAGAA+AGG - Chr5:69857693-69857712 None:intergenic 25.0%
!!! TTTTGTTTATATGGAACACA+AGG - Chr5:69855156-69855175 None:intergenic 25.0%
AAACACGTGTTCAACAAATT+AGG + Chr5:69855588-69855607 MsG0580027863.01.T01:intron 30.0%
AAATCTCAATCAACCTCATT+TGG + Chr5:69857614-69857633 MsG0580027863.01.T01:intron 30.0%
AAATCTCAATTTATGGGTGT+GGG + Chr5:69856673-69856692 MsG0580027863.01.T01:intron 30.0%
AACCTTATAGATGTATCGTT+AGG + Chr5:69856621-69856640 MsG0580027863.01.T01:intron 30.0%
AAGAGGAGAAGAAATGAAAA+TGG + Chr5:69859012-69859031 MsG0580027863.01.T01:intron 30.0%
AATCAGTTATGATAGCTCTT+TGG - Chr5:69857660-69857679 None:intergenic 30.0%
AATTCTTAAACTCGCATCAA+AGG + Chr5:69857870-69857889 MsG0580027863.01.T01:intron 30.0%
ACAAAATATAACTTCCCACA+AGG - Chr5:69855885-69855904 None:intergenic 30.0%
ATACAATAACAGAAGGGTAA+AGG - Chr5:69855979-69855998 None:intergenic 30.0%
ATATACTCTACTGGTAGATA+AGG - Chr5:69854406-69854425 None:intergenic 30.0%
ATATCCATTACCAAAAGGAT+TGG - Chr5:69859524-69859543 None:intergenic 30.0%
ATCACATGAATCAAGGAAAA+AGG - Chr5:69855627-69855646 None:intergenic 30.0%
ATCAGTTATGATAGCTCTTT+GGG - Chr5:69857659-69857678 None:intergenic 30.0%
ATCCTAACGATACATCTATA+AGG - Chr5:69856626-69856645 None:intergenic 30.0%
ATCTATGAATTCATGCAAAC+TGG + Chr5:69857223-69857242 MsG0580027863.01.T01:intron 30.0%
ATTATTCTCGTAGTGATAAG+TGG + Chr5:69854917-69854936 MsG0580027863.01.T01:intron 30.0%
ATTGTTACGCTCTTCAATAA+TGG + Chr5:69857091-69857110 MsG0580027863.01.T01:intron 30.0%
CTTAGGATTATTACTTCAAG+AGG - Chr5:69858702-69858721 None:intergenic 30.0%
CTTATATTAAAGCTGGACTA+CGG - Chr5:69854728-69854747 None:intergenic 30.0%
CTTGATGAGAATTACTCTTT+AGG + Chr5:69857826-69857845 MsG0580027863.01.T01:intron 30.0%
GCCATGAAAAATGAAGAAAA+GGG - Chr5:69855917-69855936 None:intergenic 30.0%
GGGTTTGGAAAATCAAAATT+AGG + Chr5:69858852-69858871 MsG0580027863.01.T01:intron 30.0%
GTAGTGAAATTGTGAGAAAA+AGG - Chr5:69857507-69857526 None:intergenic 30.0%
GTTCTACTATCTTGATTGTT+AGG + Chr5:69856648-69856667 MsG0580027863.01.T01:intron 30.0%
TAAGCATGTAAGGATTTCTT+AGG - Chr5:69858719-69858738 None:intergenic 30.0%
TACAATAACAGAAGGGTAAA+GGG - Chr5:69855978-69855997 None:intergenic 30.0%
TATAACGCAAATGGTGATAA+TGG + Chr5:69859664-69859683 MsG0580027863.01.T01:CDS 30.0%
TATCCCACTTATATTAAAGC+TGG - Chr5:69854735-69854754 None:intergenic 30.0%
TGAAAAATGAAGAAAAGGGA+CGG - Chr5:69855913-69855932 None:intergenic 30.0%
TGAAGTCAAATTATGTAGGA+GGG - Chr5:69857298-69857317 None:intergenic 30.0%
TGCCATGAAAAATGAAGAAA+AGG - Chr5:69855918-69855937 None:intergenic 30.0%
TGTTATGAGTAAGGAATTCA+TGG + Chr5:69856352-69856371 MsG0580027863.01.T01:intron 30.0%
TTCTTTACAACCACGTATAA+AGG + Chr5:69858085-69858104 MsG0580027863.01.T01:intron 30.0%
TTGAAGTCAAATTATGTAGG+AGG - Chr5:69857299-69857318 None:intergenic 30.0%
TTGATGCGAGTTTAAGAATT+TGG - Chr5:69857870-69857889 None:intergenic 30.0%
TTGTATTTCATCACTTATGC+TGG + Chr5:69855993-69856012 MsG0580027863.01.T01:intron 30.0%
! AAAACTTGGTGAATGAATGA+AGG - Chr5:69855536-69855555 None:intergenic 30.0%
! AACTTAAAAGATGCCATTTG+GGG - Chr5:69857469-69857488 None:intergenic 30.0%
! AAGGAATTAGTTTGGTTGTT+AGG + Chr5:69856560-69856579 MsG0580027863.01.T01:intron 30.0%
! ACCCAAATAAAACTTTTCCA+TGG - Chr5:69856169-69856188 None:intergenic 30.0%
! AGGAATTAGTTTGGTTGTTA+GGG + Chr5:69856561-69856580 MsG0580027863.01.T01:intron 30.0%
! AGTCCAGCTTTAATATAAGT+GGG + Chr5:69854729-69854748 MsG0580027863.01.T01:intron 30.0%
! CAAATAAAACTTTTCCATGG+TGG - Chr5:69856166-69856185 None:intergenic 30.0%
! GAATGTTGATGCTTGTTAAT+GGG - Chr5:69858935-69858954 None:intergenic 30.0%
! TAGTCCAGCTTTAATATAAG+TGG + Chr5:69854728-69854747 MsG0580027863.01.T01:intron 30.0%
! TCTCAAAAGTTTGATGATCT+TGG + Chr5:69856526-69856545 MsG0580027863.01.T01:intron 30.0%
! TGAATCAAGGAAAAAGGTAT+TGG - Chr5:69855621-69855640 None:intergenic 30.0%
! TGAATGTTGATGCTTGTTAA+TGG - Chr5:69858936-69858955 None:intergenic 30.0%
! TGAATTTTCCATACCAAATG+AGG - Chr5:69857630-69857649 None:intergenic 30.0%
! TTTCTCCTGTTACTTCATTT+AGG - Chr5:69855088-69855107 None:intergenic 30.0%
!! TAAGGAACTTTTTCCTATGT+TGG - Chr5:69854388-69854407 None:intergenic 30.0%
!! TCCCTTTTCTTCATTTTTCA+TGG + Chr5:69855913-69855932 MsG0580027863.01.T01:intron 30.0%
!! TTGTTGAATCGATTTGGTTA+TGG - Chr5:69855735-69855754 None:intergenic 30.0%
!!! AAATTGGCTTTTAATGCTAG+TGG + Chr5:69854480-69854499 MsG0580027863.01.T01:intron 30.0%
!!! AATTGGCTTTTAATGCTAGT+GGG + Chr5:69854481-69854500 MsG0580027863.01.T01:intron 30.0%
!!! CAACAACACAATCTTTTTTC+CGG + Chr5:69856477-69856496 MsG0580027863.01.T01:intron 30.0%
!!! CACCATGGAAAAGTTTTATT+TGG + Chr5:69856164-69856183 MsG0580027863.01.T01:intron 30.0%
!!! CATTTTTTAGCTTGTCATGT+AGG - Chr5:69858480-69858499 None:intergenic 30.0%
!!! TTTGGTTTTGTTTTGCTCTT+AGG + Chr5:69854175-69854194 MsG0580027863.01.T01:intron 30.0%
AAACAAGTTCGCGTACATTT+GGG + Chr5:69859342-69859361 MsG0580027863.01.T01:CDS 35.0%
AAACTAATTCCTTCCACCTA+TGG - Chr5:69856553-69856572 None:intergenic 35.0%
AAATGAAAATGGAGACTGAG+AGG + Chr5:69859023-69859042 MsG0580027863.01.T01:intron 35.0%
AACTGTGTATCGTTTGTACA+AGG - Chr5:69857138-69857157 None:intergenic 35.0%
AAGAGAGAATACTTCTCACA+AGG - Chr5:69855825-69855844 None:intergenic 35.0%
AAGTCAAACCACTCTTAAAC+GGG - Chr5:69856206-69856225 None:intergenic 35.0%
AATCTCAATTTATGGGTGTG+GGG + Chr5:69856674-69856693 MsG0580027863.01.T01:intron 35.0%
ACAAGCATATATCAAGCTAC+AGG + Chr5:69856040-69856059 MsG0580027863.01.T01:intron 35.0%
AGGAATGTTGAAATGTTGTG+TGG - Chr5:69857414-69857433 None:intergenic 35.0%
ATAGGTGGAAGGAATTAGTT+TGG + Chr5:69856552-69856571 MsG0580027863.01.T01:intron 35.0%
ATCTCAATACATACCCCAAA+TGG + Chr5:69857453-69857472 MsG0580027863.01.T01:intron 35.0%
ATGGGGTTGTAGGTATATAT+AGG - Chr5:69857376-69857395 None:intergenic 35.0%
ATGTTTACGTGTGTTGAGTT+TGG - Chr5:69855271-69855290 None:intergenic 35.0%
ATTAAACAAAGACACGGACT+TGG - Chr5:69855798-69855817 None:intergenic 35.0%
ATTGTTTAAGTCTCTCCTTG+TGG + Chr5:69855867-69855886 MsG0580027863.01.T01:intron 35.0%
ATTTCTTGTTGCTAGTGAGT+TGG - Chr5:69857771-69857790 None:intergenic 35.0%
CAAAAAAAGGGCAGAATTGA+GGG - Chr5:69859182-69859201 None:intergenic 35.0%
CAAATCTCAATTTATGGGTG+TGG + Chr5:69856672-69856691 MsG0580027863.01.T01:intron 35.0%
CATATATCAAGCTACAGGAT+GGG + Chr5:69856045-69856064 MsG0580027863.01.T01:intron 35.0%
CCATTTCACCAACCAATTTA+TGG + Chr5:69859406-69859425 MsG0580027863.01.T01:CDS 35.0%
CTAGCATTTCAACAAACACA+TGG - Chr5:69856307-69856326 None:intergenic 35.0%
CTATGAGCAATATACTCTAC+TGG - Chr5:69854415-69854434 None:intergenic 35.0%
GAAAAAACATGGAACAAACC+TGG + Chr5:69858981-69859000 MsG0580027863.01.T01:intron 35.0%
GAAGTCAAACCACTCTTAAA+CGG - Chr5:69856207-69856226 None:intergenic 35.0%
GAATTAAATGCAGTTTCCGT+TGG + Chr5:69854150-69854169 MsG0580027863.01.T01:intron 35.0%
GAGAGAAACACAAATCATGA+AGG + Chr5:69858323-69858342 MsG0580027863.01.T01:intron 35.0%
GAGCTCATCAATGTTAAGAT+AGG - Chr5:69855248-69855267 None:intergenic 35.0%
GGAGAGATTAAACAAAGACA+CGG - Chr5:69855804-69855823 None:intergenic 35.0%
GGTTAAGGTTGTTGAAAACT+TGG - Chr5:69855550-69855569 None:intergenic 35.0%
GTAGCTTGATATATGCTTGT+TGG - Chr5:69856040-69856059 None:intergenic 35.0%
GTATAACACTCCTTTATACG+TGG - Chr5:69858098-69858117 None:intergenic 35.0%
TACTCCACAAATCATGCTAA+GGG + Chr5:69855052-69855071 MsG0580027863.01.T01:intron 35.0%
TAGTGAAGGATTCGTCTTAT+CGG + Chr5:69856324-69856343 MsG0580027863.01.T01:intron 35.0%
TCAATCAACCTCATTTGGTA+TGG + Chr5:69857619-69857638 MsG0580027863.01.T01:intron 35.0%
TCACATCTCAATATCATCGA+TGG + Chr5:69854795-69854814 MsG0580027863.01.T01:intron 35.0%
TCTGCTTCTACTTTCTATGT+TGG - Chr5:69859244-69859263 None:intergenic 35.0%
TGTTTACGTGTGTTGAGTTT+GGG - Chr5:69855270-69855289 None:intergenic 35.0%
TTAGCAATCGAAGTCTTAAG+CGG + Chr5:69855438-69855457 MsG0580027863.01.T01:intron 35.0%
TTATTTAGTGCGGCTAATTC+AGG - Chr5:69855493-69855512 None:intergenic 35.0%
TTGGATGACATCAAAGACTA+TGG + Chr5:69856502-69856521 MsG0580027863.01.T01:intron 35.0%
TTGTTTAAGTCTCTCCTTGT+GGG + Chr5:69855868-69855887 MsG0580027863.01.T01:intron 35.0%
TTTGAAGGTTCCAATGAAAG+CGG - Chr5:69855571-69855590 None:intergenic 35.0%
TTTGTGGACCATAAATTGGT+TGG - Chr5:69859417-69859436 None:intergenic 35.0%
TTTGTTGAACACGTGTTTGA+AGG - Chr5:69855586-69855605 None:intergenic 35.0%
! AATAATGGAGAATGGACACT+AGG + Chr5:69857106-69857125 MsG0580027863.01.T01:intron 35.0%
! ACATAGGACTTTTCAACGTA+TGG + Chr5:69856409-69856428 MsG0580027863.01.T01:intron 35.0%
! ACTTCAAGAGGCTCAAATTT+TGG - Chr5:69858690-69858709 None:intergenic 35.0%
! AGATTTTACCAGTGAGAAGA+GGG - Chr5:69857600-69857619 None:intergenic 35.0%
! ATAATGGAGAATGGACACTA+GGG + Chr5:69857107-69857126 MsG0580027863.01.T01:intron 35.0%
! CTTGATATATGCTTGTTGGA+GGG - Chr5:69856036-69856055 None:intergenic 35.0%
! CTTGTCATGTAGGTGTTTTT+GGG - Chr5:69858470-69858489 None:intergenic 35.0%
! GCGATATGGATTATTTAGTG+CGG - Chr5:69855503-69855522 None:intergenic 35.0%
! GTAGAAAGCAATTTTCGCTT+GGG + Chr5:69854220-69854239 MsG0580027863.01.T01:intron 35.0%
! GTTGTGTTGTTGAATCGATT+TGG - Chr5:69855741-69855760 None:intergenic 35.0%
! GTTTGTTGAAATGCTAGTGA+AGG + Chr5:69856310-69856329 MsG0580027863.01.T01:intron 35.0%
! TAGGTGGAAGTGTATTGAAA+AGG - Chr5:69857357-69857376 None:intergenic 35.0%
! TCGCGCATATTGACTATAAT+CGG - Chr5:69856456-69856475 None:intergenic 35.0%
! TCGGTACTTTGTTATGAGTA+AGG + Chr5:69856343-69856362 MsG0580027863.01.T01:intron 35.0%
! TGTAGAAAGCAATTTTCGCT+TGG + Chr5:69854219-69854238 MsG0580027863.01.T01:intron 35.0%
! TTGCGATTAAATTTTTGCCC+AGG - Chr5:69858020-69858039 None:intergenic 35.0%
!! AATTCTGAAACTCAATGTGC+TGG + Chr5:69859370-69859389 MsG0580027863.01.T01:CDS 35.0%
!! ACTGGTTAATTTGTGACTTG+GGG - Chr5:69856113-69856132 None:intergenic 35.0%
!! ATTACCAAAAGGATTGGTCA+CGG - Chr5:69859518-69859537 None:intergenic 35.0%
!! CACTGGTTAATTTGTGACTT+GGG - Chr5:69856114-69856133 None:intergenic 35.0%
!! CCATAAATTGGTTGGTGAAA+TGG - Chr5:69859409-69859428 None:intergenic 35.0%
!! TCACTGGTTAATTTGTGACT+TGG - Chr5:69856115-69856134 None:intergenic 35.0%
!! TGGTGATGGAAATGTAAGAT+GGG - Chr5:69857394-69857413 None:intergenic 35.0%
!! TTGAATCGATTTGGTTATGG+AGG - Chr5:69855732-69855751 None:intergenic 35.0%
!! TTGTCATGTAGGTGTTTTTG+GGG - Chr5:69858469-69858488 None:intergenic 35.0%
!!! GGTTGTTAGGGTATTGTTTT+TGG + Chr5:69856573-69856592 MsG0580027863.01.T01:intron 35.0%
!!! TGATGTGGCTGTTTGTTTTT+TGG - Chr5:69857704-69857723 None:intergenic 35.0%
!!! TTGACGGATTTTGTTCAAGT+AGG + Chr5:69857943-69857962 MsG0580027863.01.T01:intron 35.0%
!!! TTTTTTGGAAGAAGAAAGGG+AGG - Chr5:69857689-69857708 None:intergenic 35.0%
AAAACATGGAACAAACCTGG+AGG + Chr5:69858984-69859003 MsG0580027863.01.T01:intron 40.0%
AAATTATGTAGGAGGGTGAG+TGG - Chr5:69857291-69857310 None:intergenic 40.0%
AATAACGATGTGGGTCTTGA+TGG + Chr5:69859457-69859476 MsG0580027863.01.T01:CDS 40.0%
ACAACCTTAACCGCTTTCAT+TGG + Chr5:69855558-69855577 MsG0580027863.01.T01:intron 40.0%
ACGTTGAAAAGTCCTATGTG+AGG - Chr5:69856408-69856427 None:intergenic 40.0%
AGAAAATATGGCTATTGGGC+TGG + Chr5:69859214-69859233 MsG0580027863.01.T01:intron 40.0%
AGCTCCTTTAGCATAAACAC+CGG - Chr5:69859593-69859612 None:intergenic 40.0%
AGTACTTGACTCCTACATCT+AGG - Chr5:69854978-69854997 None:intergenic 40.0%
AGTGGCCTAAATGAAGTAAC+AGG + Chr5:69855080-69855099 MsG0580027863.01.T01:intron 40.0%
ATAACAACGCGTAATCTAGC+TGG + Chr5:69857255-69857274 MsG0580027863.01.T01:intron 40.0%
ATCGCTCAAAGGCTAAGATT+CGG - Chr5:69855418-69855437 None:intergenic 40.0%
ATGCAGTTTCCGTTGGAATT+TGG + Chr5:69854157-69854176 MsG0580027863.01.T01:intron 40.0%
ATGTCCCTTAGCATGATTTG+TGG - Chr5:69855059-69855078 None:intergenic 40.0%
CCAAAAAAAGGGCAGAATTG+AGG - Chr5:69859183-69859202 None:intergenic 40.0%
CGCCCAAAAATACTACAAAG+TGG + Chr5:69858558-69858577 MsG0580027863.01.T01:intron 40.0%
GAAAATATGGCTATTGGGCT+GGG + Chr5:69859215-69859234 MsG0580027863.01.T01:intron 40.0%
GAAACAAGTTCGCGTACATT+TGG + Chr5:69859341-69859360 MsG0580027863.01.T01:CDS 40.0%
GAAATGTAAGATGGGGTTGT+AGG - Chr5:69857386-69857405 None:intergenic 40.0%
GAGTCACGATAAGTTAGAGA+AGG + Chr5:69859115-69859134 MsG0580027863.01.T01:intron 40.0%
GCACTTTGTGGACCATAAAT+TGG - Chr5:69859421-69859440 None:intergenic 40.0%
GCATATATCAAGCTACAGGA+TGG + Chr5:69856044-69856063 MsG0580027863.01.T01:intron 40.0%
GGGTTGTAGGTATATATAGG+TGG - Chr5:69857373-69857392 None:intergenic 40.0%
GGTGAAGAAAGCAATTTCAG+TGG + Chr5:69854196-69854215 MsG0580027863.01.T01:intron 40.0%
GTACTCCACAAATCATGCTA+AGG + Chr5:69855051-69855070 MsG0580027863.01.T01:intron 40.0%
GTCAAATTAGGGAGTGGTTA+TGG - Chr5:69854308-69854327 None:intergenic 40.0%
GTGCTCCATAAGAAGAACTA+GGG - Chr5:69859306-69859325 None:intergenic 40.0%
GTTGAAATGTTGTGTGGTGA+TGG - Chr5:69857408-69857427 None:intergenic 40.0%
GTTGCACCAAATAACGATGT+GGG + Chr5:69859448-69859467 MsG0580027863.01.T01:CDS 40.0%
TAATGCTAGTGGGAGATTGT+TGG + Chr5:69854491-69854510 MsG0580027863.01.T01:intron 40.0%
TAATGGAGAATGGACACTAG+GGG + Chr5:69857108-69857127 MsG0580027863.01.T01:intron 40.0%
TATGCTAAAGGAGCTTATCC+TGG + Chr5:69859598-69859617 MsG0580027863.01.T01:CDS 40.0%
TCAAGACCCACATCGTTATT+TGG - Chr5:69859457-69859476 None:intergenic 40.0%
TCGATTGCTAAATCGCTCAA+AGG - Chr5:69855429-69855448 None:intergenic 40.0%
TCTTTGATGTCATCCAACTC+CGG - Chr5:69856499-69856518 None:intergenic 40.0%
TGCTCCATAAGAAGAACTAG+GGG - Chr5:69859305-69859324 None:intergenic 40.0%
! AACGTCAGCTTGTTCTACAT+TGG + Chr5:69859723-69859742 MsG0580027863.01.T01:CDS 40.0%
! AAGAGGCACAAATTGAGAGA+GGG + Chr5:69859046-69859065 MsG0580027863.01.T01:intron 40.0%
! ACAAAGTGGTTTCAGGTCAA+AGG - Chr5:69854953-69854972 None:intergenic 40.0%
! CAAAGTGGTTTCAGGTCAAA+GGG - Chr5:69854952-69854971 None:intergenic 40.0%
! CGCTCTTCAATAATGGAGAA+TGG + Chr5:69857098-69857117 MsG0580027863.01.T01:intron 40.0%
! GAGATTTTACCAGTGAGAAG+AGG - Chr5:69857601-69857620 None:intergenic 40.0%
! GCTTGATATATGCTTGTTGG+AGG - Chr5:69856037-69856056 None:intergenic 40.0%
! GCTTGTCATGTAGGTGTTTT+TGG - Chr5:69858471-69858490 None:intergenic 40.0%
! GGATTTTGTTCAAGTAGGTG+TGG + Chr5:69857948-69857967 MsG0580027863.01.T01:intron 40.0%
! GTAGAACAAGCTGACGTTTT+AGG - Chr5:69859721-69859740 None:intergenic 40.0%
! GTGACCAATCCTTTTGGTAA+TGG + Chr5:69859517-69859536 MsG0580027863.01.T01:CDS 40.0%
! GTTATGATAGCTCTTTGGGA+TGG - Chr5:69857655-69857674 None:intergenic 40.0%
! GTTTGATGATCTTGGACCAT+AGG + Chr5:69856534-69856553 MsG0580027863.01.T01:intron 40.0%
! TAGCCAAATCAAAGCATCAC+AGG + Chr5:69858514-69858533 MsG0580027863.01.T01:intron 40.0%
! TGAAGTGTCAAATTAGGGAG+TGG - Chr5:69854314-69854333 None:intergenic 40.0%
! TGTACCGGTGTTTATGCTAA+AGG + Chr5:69859586-69859605 MsG0580027863.01.T01:CDS 40.0%
!! ACGCAAATGGTGATAATGGA+AGG + Chr5:69859668-69859687 MsG0580027863.01.T01:CDS 40.0%
!! CTGGTTAATTTGTGACTTGG+GGG - Chr5:69856112-69856131 None:intergenic 40.0%
!! CTTTTGGTGGACAAAACAAG+TGG + Chr5:69859634-69859653 MsG0580027863.01.T01:CDS 40.0%
!! GGTGATGGAAATGTAAGATG+GGG - Chr5:69857393-69857412 None:intergenic 40.0%
!! GTGGTGATGGAAATGTAAGA+TGG - Chr5:69857395-69857414 None:intergenic 40.0%
!! TCGTTATTTGGTGCAACCAA+TGG - Chr5:69859445-69859464 None:intergenic 40.0%
!!! AATGTCGCTAGTCTTTTAGC+TGG + Chr5:69859490-69859509 MsG0580027863.01.T01:CDS 40.0%
!!! CACAATCTTTTTTCCGGAGT+TGG + Chr5:69856483-69856502 MsG0580027863.01.T01:intron 40.0%
!!! CACTTGTTTTGTCCACCAAA+AGG - Chr5:69859636-69859655 None:intergenic 40.0%
!!! CCTCAATTCTGCCCTTTTTT+TGG + Chr5:69859180-69859199 MsG0580027863.01.T01:intron 40.0%
!!! GTTTTAGGATCAACAATCGC+AGG - Chr5:69859706-69859725 None:intergenic 40.0%
!!! TAGTATTTTTGGGCGCCTAT+TGG - Chr5:69858553-69858572 None:intergenic 40.0%
!!! TGTCATGTAGGTGTTTTTGG+GGG - Chr5:69858468-69858487 None:intergenic 40.0%
AAATGGAGACTGAGAGGAAG+AGG + Chr5:69859029-69859048 MsG0580027863.01.T01:intron 45.0%
AAGTAGGTGTGGAACCCATA+TGG + Chr5:69857959-69857978 MsG0580027863.01.T01:intron 45.0%
AAGTTCGCGTACATTTGGGT+TGG + Chr5:69859346-69859365 MsG0580027863.01.T01:CDS 45.0%
ACCCATATGGTTCTTCTCAG+TGG + Chr5:69857972-69857991 MsG0580027863.01.T01:intron 45.0%
AGAAAGTAGAAGCAGAGCCT+GGG + Chr5:69859248-69859267 MsG0580027863.01.T01:intron 45.0%
AGAGATTGAGTCACTGAGAG+AGG + Chr5:69859090-69859109 MsG0580027863.01.T01:intron 45.0%
AGCTGTTAGGACAACGTTGA+TGG - Chr5:69857910-69857929 None:intergenic 45.0%
AGCTTATCCTGGTTATGCTG+GGG + Chr5:69859609-69859628 MsG0580027863.01.T01:CDS 45.0%
AGGACCAAAAGAAGCTCCTT+TGG + Chr5:69859549-69859568 MsG0580027863.01.T01:CDS 45.0%
AGTGCGGCTAATTCAGGAAT+CGG - Chr5:69855487-69855506 None:intergenic 45.0%
ATCATGCTAAGGGACATGAG+TGG + Chr5:69855062-69855081 MsG0580027863.01.T01:intron 45.0%
CAATTTCATCGCTAGCTGTC+CGG + Chr5:69856071-69856090 MsG0580027863.01.T01:intron 45.0%
CATATGGTTCTTCTCAGTGG+CGG + Chr5:69857975-69857994 MsG0580027863.01.T01:intron 45.0%
CCACTTTGTAGCCTAGATGT+AGG + Chr5:69854964-69854983 MsG0580027863.01.T01:intron 45.0%
CCAGGAATTTCTTAGAGCCT+GGG + Chr5:69858000-69858019 MsG0580027863.01.T01:intron 45.0%
CCTACATCTAGGCTACAAAG+TGG - Chr5:69854967-69854986 None:intergenic 45.0%
CGCCTATTGGTGTGTTTGTT+TGG - Chr5:69858540-69858559 None:intergenic 45.0%
CGTGCTCCATAAGAAGAACT+AGG - Chr5:69859307-69859326 None:intergenic 45.0%
CTAACACATCAGCAGCTGTT+AGG - Chr5:69857923-69857942 None:intergenic 45.0%
CTAGGCTACAAAGTGGTTTC+AGG - Chr5:69854960-69854979 None:intergenic 45.0%
GAGATTGAGTCACTGAGAGA+GGG + Chr5:69859091-69859110 MsG0580027863.01.T01:intron 45.0%
GAGCTTATCCTGGTTATGCT+GGG + Chr5:69859608-69859627 MsG0580027863.01.T01:CDS 45.0%
GCCACTGAGAAGAACCATAT+GGG - Chr5:69857976-69857995 None:intergenic 45.0%
GCTATCTTCCCGTTTAAGAG+TGG + Chr5:69856195-69856214 MsG0580027863.01.T01:intron 45.0%
GCTGCTGATGTGTTAGTTGA+CGG + Chr5:69857927-69857946 MsG0580027863.01.T01:intron 45.0%
GGCCAAACAAACACACCAAT+AGG + Chr5:69858535-69858554 MsG0580027863.01.T01:intron 45.0%
GGTGCTAGCTATAACGCAAA+TGG + Chr5:69859655-69859674 MsG0580027863.01.T01:CDS 45.0%
GGTTCCAATGAAAGCGGTTA+AGG - Chr5:69855565-69855584 None:intergenic 45.0%
GGTTGCACCAAATAACGATG+TGG + Chr5:69859447-69859466 MsG0580027863.01.T01:CDS 45.0%
GTTATGGAGGAATCGCGATA+TGG - Chr5:69855719-69855738 None:intergenic 45.0%
TAGAAAGTAGAAGCAGAGCC+TGG + Chr5:69859247-69859266 MsG0580027863.01.T01:intron 45.0%
TCCATAAGAAGAACTAGGGG+CGG - Chr5:69859302-69859321 None:intergenic 45.0%
TCTTATGGAGCACGCGTAAA+TGG + Chr5:69859313-69859332 MsG0580027863.01.T01:CDS 45.0%
TGATGATCTTGGACCATAGG+TGG + Chr5:69856537-69856556 MsG0580027863.01.T01:intron 45.0%
TGGCCTGTGATGCTTTGATT+TGG - Chr5:69858520-69858539 None:intergenic 45.0%
! AAGCAATTTTCGCTTGGGCT+TGG + Chr5:69854225-69854244 MsG0580027863.01.T01:intron 45.0%
! AAGGACAGAAGCATGCGATA+TGG - Chr5:69855517-69855536 None:intergenic 45.0%
! GAAGAGGCACAAATTGAGAG+AGG + Chr5:69859045-69859064 MsG0580027863.01.T01:intron 45.0%
! GCTTCCAAAGGAGCTTCTTT+TGG - Chr5:69859556-69859575 None:intergenic 45.0%
! GCTTGTTGGAGGGACTTTAT+GGG - Chr5:69856026-69856045 None:intergenic 45.0%
! GTTAACCTAGCTCTCTCACT+AGG + Chr5:69857793-69857812 MsG0580027863.01.T01:intron 45.0%
! TGCTTGTTGGAGGGACTTTA+TGG - Chr5:69856027-69856046 None:intergenic 45.0%
! TTCAGTTGATTTCCACCACG+TGG - Chr5:69857740-69857759 None:intergenic 45.0%
! TTTTCCATGGTGGCTTTCGA+GGG - Chr5:69856156-69856175 None:intergenic 45.0%
!! GTTAATTTGTGACTTGGGGG+CGG - Chr5:69856109-69856128 None:intergenic 45.0%
!!! GTCATGTAGGTGTTTTTGGG+GGG - Chr5:69858467-69858486 None:intergenic 45.0%
AAAAGGTCCCCAGCATAACC+AGG - Chr5:69859619-69859638 None:intergenic 50.0%
AACAGAAGGGTAAAGGGTCG+TGG - Chr5:69855972-69855991 None:intergenic 50.0%
AAGGACGACGGTGATGAAGT+TGG + Chr5:69854074-69854093 MsG0580027863.01.T01:CDS 50.0%
AAGTCCTATGTGAGGCTGAG+AGG - Chr5:69856400-69856419 None:intergenic 50.0%
ACATCCTCTCAGCCTCACAT+AGG + Chr5:69856393-69856412 MsG0580027863.01.T01:intron 50.0%
ATGACGGTGGAAAAGGACGA+CGG + Chr5:69854062-69854081 MsG0580027863.01.T01:CDS 50.0%
CAAACCTGGAGGAAGTGAAG+AGG + Chr5:69858995-69859014 MsG0580027863.01.T01:intron 50.0%
CGCCACTGAGAAGAACCATA+TGG - Chr5:69857977-69857996 None:intergenic 50.0%
GAGTACCTAGTGAGAGAGCT+AGG - Chr5:69857801-69857820 None:intergenic 50.0%
GATCTTGGACCATAGGTGGA+AGG + Chr5:69856541-69856560 MsG0580027863.01.T01:intron 50.0%
GCAACCAATGGTGCACTTTG+TGG - Chr5:69859433-69859452 None:intergenic 50.0%
GCCAGGAATTTCTTAGAGCC+TGG + Chr5:69857999-69858018 MsG0580027863.01.T01:intron 50.0%
GGAGCTTATCCTGGTTATGC+TGG + Chr5:69859607-69859626 MsG0580027863.01.T01:CDS 50.0%
GGCAACTGATGGTTGTGATG+TGG - Chr5:69857719-69857738 None:intergenic 50.0%
TGGTCCACAAAGTGCACCAT+TGG + Chr5:69859426-69859445 MsG0580027863.01.T01:CDS 50.0%
TTCTCCTCTTCACTTCCTCC+AGG - Chr5:69859002-69859021 None:intergenic 50.0%
TTTCCATGGTGGCTTTCGAG+GGG - Chr5:69856155-69856174 None:intergenic 50.0%
! AATGTGCTGGTCAATGCGCA+TGG + Chr5:69859383-69859402 MsG0580027863.01.T01:CDS 50.0%
! ACCGCCCCTAGTTCTTCTTA+TGG + Chr5:69859298-69859317 MsG0580027863.01.T01:CDS 50.0%
! AGCTCCTTTGGAAGCTGCTT+CGG + Chr5:69859561-69859580 MsG0580027863.01.T01:CDS 50.0%
! CTTTTCCATGGTGGCTTTCG+AGG - Chr5:69856157-69856176 None:intergenic 50.0%
! GGAACCGTGACCAATCCTTT+TGG + Chr5:69859511-69859530 MsG0580027863.01.T01:CDS 50.0%
! TCGCTTGGGCTTGGTTTAGT+GGG + Chr5:69854234-69854253 MsG0580027863.01.T01:intron 50.0%
! TGGTTATGCTGGGGACCTTT+TGG + Chr5:69859618-69859637 MsG0580027863.01.T01:CDS 50.0%
! TTATGCTGGGGACCTTTTGG+TGG + Chr5:69859621-69859640 MsG0580027863.01.T01:CDS 50.0%
! TTCGCTTGGGCTTGGTTTAG+TGG + Chr5:69854233-69854252 MsG0580027863.01.T01:intron 50.0%
!! CCCAGGCTCTAAGAAATTCC+TGG - Chr5:69858003-69858022 None:intergenic 50.0%
!! GTGATGAAGTTGGTGAACGC+CGG + Chr5:69854084-69854103 MsG0580027863.01.T01:CDS 50.0%
AACCATCAGTTGCCACGTGG+TGG + Chr5:69857725-69857744 MsG0580027863.01.T01:intron 55.0%
AGAAGGGTAAAGGGTCGTGG+TGG - Chr5:69855969-69855988 None:intergenic 55.0%
AGTTGTTACAGGCGACGGTG+AGG + Chr5:69854114-69854133 MsG0580027863.01.T01:intron 55.0%
ATCCGGTCTGGGCTTATGCA+TGG + Chr5:69854261-69854280 MsG0580027863.01.T01:intron 55.0%
CAAGCCGAAGCAGCTTCCAA+AGG - Chr5:69859568-69859587 None:intergenic 55.0%
CACAAAGGCCCTCTTCTCAC+TGG + Chr5:69857589-69857608 MsG0580027863.01.T01:intron 55.0%
CACAACCATCAGTTGCCACG+TGG + Chr5:69857722-69857741 MsG0580027863.01.T01:intron 55.0%
CACCATGCATAAGCCCAGAC+CGG - Chr5:69854266-69854285 None:intergenic 55.0%
CAGTGAGAAGAGGGCCTTTG+TGG - Chr5:69857591-69857610 None:intergenic 55.0%
CCAGTGATCTGATCCCGACA+CGG + Chr5:69856128-69856147 MsG0580027863.01.T01:intron 55.0%
CCGGAAGTTGTTACAGGCGA+CGG + Chr5:69854109-69854128 MsG0580027863.01.T01:CDS 55.0%
CCGTCGCCTGTAACAACTTC+CGG - Chr5:69854112-69854131 None:intergenic 55.0%
CCTGTAACAACTTCCGGCAC+CGG - Chr5:69854106-69854125 None:intergenic 55.0%
TTCCACCACGTGGCAACTGA+TGG - Chr5:69857730-69857749 None:intergenic 55.0%
TTCCATGGTGGCTTTCGAGG+GGG - Chr5:69856154-69856173 None:intergenic 55.0%
! CGATGTGGGTCTTGATGGCA+TGG + Chr5:69859462-69859481 MsG0580027863.01.T01:CDS 55.0%
! GAAGCTGCTTCGGCTTGTAC+CGG + Chr5:69859571-69859590 MsG0580027863.01.T01:CDS 55.0%
! TTGGGCTTGGTTTAGTGGGC+CGG + Chr5:69854238-69854257 MsG0580027863.01.T01:intron 55.0%
! TTGGTTTAGTGGGCCGGATC+CGG + Chr5:69854244-69854263 MsG0580027863.01.T01:intron 55.0%
! TTGTGACTTGGGGGCGGTTT+AGG - Chr5:69856103-69856122 None:intergenic 55.0%
CCGTGTCGGGATCAGATCAC+TGG - Chr5:69856131-69856150 None:intergenic 60.0%
CTTGGGGGCGGTTTAGGAAG+TGG - Chr5:69856097-69856116 None:intergenic 60.0%
GCATAAGCCCAGACCGGATC+CGG - Chr5:69854260-69854279 None:intergenic 60.0%
GGCGACGGTGAGGTTGTTAC+AGG + Chr5:69854124-69854143 MsG0580027863.01.T01:intron 60.0%
! CCGGTGCCGGAAGTTGTTAC+AGG + Chr5:69854103-69854122 MsG0580027863.01.T01:CDS 60.0%
! GTTACACCCCCAGCTAGCCT+GGG - Chr5:69859280-69859299 None:intergenic 60.0%
! TTCTTCTCAGTGGCGGAGCC+AGG + Chr5:69857982-69858001 MsG0580027863.01.T01:intron 60.0%
!! AAGTTGGTGAACGCCGGTGC+CGG + Chr5:69854090-69854109 MsG0580027863.01.T01:CDS 60.0%
GGGGCGGTTTAGGAAGTGGC+CGG - Chr5:69856093-69856112 None:intergenic 65.0%
GGTTACACCCCCAGCTAGCC+TGG - Chr5:69859281-69859300 None:intergenic 65.0%
! CTAGAGCCCAGGCTAGCTGG+GGG + Chr5:69859271-69859290 MsG0580027863.01.T01:CDS 65.0%
! GCTAGAGCCCAGGCTAGCTG+GGG + Chr5:69859270-69859289 MsG0580027863.01.T01:CDS 65.0%
! GGCTAGAGCCCAGGCTAGCT+GGG + Chr5:69859269-69859288 MsG0580027863.01.T01:CDS 65.0%
! TAGTGGGCCGGATCCGGTCT+GGG + Chr5:69854250-69854269 MsG0580027863.01.T01:intron 65.0%
! TTAGTGGGCCGGATCCGGTC+TGG + Chr5:69854249-69854268 MsG0580027863.01.T01:intron 65.0%
GCTTTCGAGGGGGCCGTGTC+GGG - Chr5:69856144-69856163 None:intergenic 70.0%
GGCCCCCTCGAAAGCCACCA+TGG + Chr5:69856149-69856168 MsG0580027863.01.T01:intron 70.0%
GGCTTTCGAGGGGGCCGTGT+CGG - Chr5:69856145-69856164 None:intergenic 70.0%
GGGCTAGAGCCCAGGCTAGC+TGG + Chr5:69859268-69859287 MsG0580027863.01.T01:CDS 70.0%
! CAGAGCCTGGGCTAGAGCCC+AGG + Chr5:69859260-69859279 MsG0580027863.01.T01:CDS 70.0%
! GCTAGCCTGGGCTCTAGCCC+AGG - Chr5:69859268-69859287 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr5 gene 69854062 69859750 69854062 ID=MsG0580027863.01;Name=MsG0580027863.01
Chr5 mRNA 69854062 69859750 69854062 ID=MsG0580027863.01.T01;Parent=MsG0580027863.01;Name=MsG0580027863.01.T01;_AED=0.50;_eAED=0.57;_QI=0|0|0|1|1|1|2|0|189
Chr5 exon 69854062 69854130 69854062 ID=MsG0580027863.01.T01:exon:25480;Parent=MsG0580027863.01.T01
Chr5 exon 69859250 69859750 69859250 ID=MsG0580027863.01.T01:exon:25481;Parent=MsG0580027863.01.T01
Chr5 CDS 69854062 69854130 69854062 ID=MsG0580027863.01.T01:cds;Parent=MsG0580027863.01.T01
Chr5 CDS 69859250 69859750 69859250 ID=MsG0580027863.01.T01:cds;Parent=MsG0580027863.01.T01
Gene Sequence

>MsG0580027863.01.T01

ATGACGGTGGAAAAGGACGACGGTGATGAAGTTGGTGAACGCCGGTGCCGGAAGTTGTTACAGGCGACGAAAGTAGAAGCAGAGCCTGGGCTAGAGCCCAGGCTAGCTGGGGGTGTAACCGCCCCTAGTTCTTCTTATGGAGCACGCGTAAATGGAAAGAGAAACAAGTTCGCGTACATTTGGGTTGGAAATTCTGAAACTCAATGTGCTGGTCAATGCGCATGGCCATTTCACCAACCAATTTATGGTCCACAAAGTGCACCATTGGTTGCACCAAATAACGATGTGGGTCTTGATGGCATGGTTATAAATGTCGCTAGTCTTTTAGCTGGAACCGTGACCAATCCTTTTGGTAATGGATATTTTCAAGGACCAAAAGAAGCTCCTTTGGAAGCTGCTTCGGCTTGTACCGGTGTTTATGCTAAAGGAGCTTATCCTGGTTATGCTGGGGACCTTTTGGTGGACAAAACAAGTGGTGCTAGCTATAACGCAAATGGTGATAATGGAAGGAAGTATTTGTTGCCTGCGATTGTTGATCCTAAAACGTCAGCTTGTTCTACATTGGTATAA
Protein sequence

>MsG0580027863.01.T01

MTVEKDDGDEVGERRCRKLLQATKVEAEPGLEPRLAGGVTAPSSSYGARVNGKRNKFAYIWVGNSETQCAGQCAWPFHQPIYGPQSAPLVAPNNDVGLDGMVINVASLLAGTVTNPFGNGYFQGPKEAPLEAASACTGVYAKGAYPGYAGDLLVDKTSGASYNANGDNGRKYLLPAIVDPKTSACSTLV*