Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580027864.01.T01 | AES98100.2 | 76.744 | 215 | 40 | 2 | 28 | 242 | 111 | 315 | 6.30E-107 | 321 |
| MsG0580027864.01.T01 | AES98100.2 | 72.072 | 111 | 30 | 1 | 1 | 111 | 1 | 110 | 3.26E-40 | 151 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580027864.01.T01 | O82161 | 84.106 | 151 | 24 | 0 | 92 | 242 | 163 | 313 | 3.45E-89 | 269 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580027864.01.T01 | A0A6A6KUE3 | 66.667 | 276 | 51 | 4 | 6 | 242 | 265 | 538 | 3.44e-119 | 359 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0580027860.01 | MsG0580027864.01 | 0.854640 | 1.075621e-61 | 2.418351e-58 |
| MsG0580027863.01 | MsG0580027864.01 | 0.887762 | 1.072784e-72 | 8.085454e-69 |
| MsG0580027864.01 | MsG0580027875.01 | 0.839452 | 1.571653e-57 | 2.171397e-54 |
| MsG0580027864.01 | MsG0580027876.01 | 0.860531 | 1.935685e-63 | 5.308124e-60 |
| MsG0580027864.01 | MsG0580028371.01 | 0.827307 | 1.682038e-54 | 1.617730e-51 |
| MsG0580027864.01 | MsG0580028377.01 | 0.816699 | 4.832641e-52 | 3.448797e-49 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580027864.01.T01 | MTR_5g464340 | 76.744 | 215 | 40 | 2 | 28 | 242 | 111 | 315 | 7.63e-111 | 321 |
| MsG0580027864.01.T01 | MTR_5g464340 | 72.072 | 111 | 30 | 1 | 1 | 111 | 1 | 110 | 3.94e-44 | 151 |
| MsG0580027864.01.T01 | MTR_5g064340 | 76.744 | 215 | 40 | 2 | 28 | 242 | 111 | 315 | 7.63e-111 | 321 |
| MsG0580027864.01.T01 | MTR_5g064340 | 72.072 | 111 | 30 | 1 | 1 | 111 | 1 | 110 | 3.94e-44 | 151 |
| MsG0580027864.01.T01 | MTR_5g064345 | 76.279 | 215 | 41 | 2 | 28 | 242 | 111 | 315 | 1.87e-109 | 318 |
| MsG0580027864.01.T01 | MTR_5g064345 | 73.874 | 111 | 28 | 1 | 1 | 111 | 1 | 110 | 2.30e-46 | 157 |
| MsG0580027864.01.T01 | MTR_5g064360 | 75.814 | 215 | 42 | 2 | 28 | 242 | 112 | 316 | 1.86e-108 | 315 |
| MsG0580027864.01.T01 | MTR_5g064360 | 94.505 | 91 | 5 | 0 | 1 | 91 | 1 | 91 | 4.07e-54 | 177 |
| MsG0580027864.01.T01 | MTR_3g074890 | 56.446 | 287 | 58 | 5 | 20 | 242 | 21 | 304 | 7.41e-98 | 288 |
| MsG0580027864.01.T01 | MTR_3g074830 | 62.719 | 228 | 70 | 3 | 20 | 242 | 128 | 345 | 1.52e-88 | 266 |
| MsG0580027864.01.T01 | MTR_3g074830 | 59.091 | 66 | 25 | 1 | 9 | 72 | 36 | 101 | 1.93e-17 | 80.5 |
| MsG0580027864.01.T01 | MTR_3g074860 | 63.913 | 230 | 65 | 4 | 14 | 242 | 92 | 304 | 1.59e-88 | 264 |
| MsG0580027864.01.T01 | MTR_3g074860 | 79.167 | 72 | 12 | 1 | 20 | 91 | 21 | 89 | 1.67e-31 | 117 |
| MsG0580027864.01.T01 | MTR_4g094240 | 72.848 | 151 | 38 | 1 | 92 | 242 | 153 | 300 | 1.16e-75 | 231 |
| MsG0580027864.01.T01 | MTR_2g009070 | 68.874 | 151 | 44 | 1 | 92 | 242 | 157 | 304 | 6.28e-75 | 229 |
| MsG0580027864.01.T01 | MTR_2g009070 | 42.105 | 95 | 49 | 3 | 1 | 94 | 2 | 91 | 5.68e-14 | 70.5 |
| MsG0580027864.01.T01 | MTR_8g071310 | 69.118 | 68 | 21 | 0 | 175 | 242 | 18 | 85 | 1.84e-26 | 98.6 |
| MsG0580027864.01.T01 | MTR_8g088900 | 60.000 | 90 | 36 | 0 | 153 | 242 | 283 | 372 | 6.97e-25 | 101 |
| MsG0580027864.01.T01 | MTR_4g013230 | 73.846 | 65 | 14 | 1 | 178 | 242 | 79 | 140 | 2.42e-24 | 94.7 |
| MsG0580027864.01.T01 | MTR_4g033790 | 40.146 | 137 | 76 | 4 | 92 | 227 | 198 | 329 | 4.39e-19 | 85.1 |
| MsG0580027864.01.T01 | MTR_1g076470 | 37.748 | 151 | 87 | 4 | 92 | 239 | 195 | 341 | 2.52e-16 | 77.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580027864.01.T01 | AT4G08950 | 70.109 | 184 | 45 | 3 | 60 | 242 | 140 | 314 | 3.67e-83 | 251 |
| MsG0580027864.01.T01 | AT4G08950 | 61.250 | 80 | 26 | 3 | 24 | 99 | 20 | 98 | 2.76e-19 | 85.5 |
| MsG0580027864.01.T01 | AT1G35140 | 80.451 | 133 | 26 | 0 | 109 | 241 | 176 | 308 | 8.79e-78 | 237 |
| MsG0580027864.01.T01 | AT1G35140 | 50.980 | 102 | 45 | 2 | 1 | 102 | 1 | 97 | 3.62e-24 | 98.6 |
| MsG0580027864.01.T01 | AT5G64260 | 70.199 | 151 | 44 | 1 | 92 | 242 | 156 | 305 | 5.58e-74 | 227 |
| MsG0580027864.01.T01 | AT5G64260 | 48.235 | 85 | 43 | 1 | 10 | 94 | 7 | 90 | 1.13e-17 | 80.9 |
| MsG0580027864.01.T01 | AT5G09440 | 65.563 | 151 | 35 | 3 | 92 | 242 | 145 | 278 | 1.03e-62 | 197 |
| MsG0580027864.01.T01 | AT3G02970 | 34.615 | 156 | 86 | 1 | 101 | 240 | 175 | 330 | 4.33e-27 | 106 |
| MsG0580027864.01.T01 | AT5G51550 | 39.597 | 149 | 84 | 4 | 92 | 239 | 188 | 331 | 4.60e-20 | 87.8 |
| MsG0580027864.01.T01 | AT5G51550 | 37.333 | 75 | 43 | 1 | 20 | 94 | 38 | 108 | 8.18e-11 | 61.6 |
| MsG0580027864.01.T01 | AT2G35150 | 38.562 | 153 | 84 | 4 | 92 | 238 | 168 | 316 | 3.68e-17 | 79.7 |
| MsG0580027864.01.T01 | AT2G17230 | 37.748 | 151 | 87 | 4 | 92 | 239 | 211 | 357 | 3.76e-17 | 80.1 |
Find 57 sgRNAs with CRISPR-Local
Find 83 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAACAAGTTCGCGTATATT+TGG | 0.180098 | 5:+69867079 | MsG0580027864.01.T01:CDS |
| CCATTTCACCAACCAATTTA+TGG | 0.182864 | 5:+69867144 | MsG0580027864.01.T01:CDS |
| TCTTATGGTGCACGTGTAAA+TGG | 0.207934 | 5:+69867051 | MsG0580027864.01.T01:CDS |
| TCAAGACCTACATCGTTATT+TGG | 0.256091 | 5:-69867192 | None:intergenic |
| GGAACCCATGGTTCTTCTTA+TGG | 0.283880 | 5:+69867036 | MsG0580027864.01.T01:CDS |
| TGGTTATGCTGGGGCCCTTT+TGG | 0.286824 | 5:+69867356 | MsG0580027864.01.T01:CDS |
| GAGGTTGATTGAGATATTTC+CGG | 0.297504 | 5:-69866675 | None:intergenic |
| GCACTTTGTGGACCATAAAT+TGG | 0.307975 | 5:-69867156 | None:intergenic |
| GCTTCCAAAGGAGCTTCTTT+TGG | 0.308698 | 5:-69867291 | None:intergenic |
| AGCTCCTTTGGAAGCTGCTT+CGG | 0.362716 | 5:+69867299 | MsG0580027864.01.T01:CDS |
| AAACAAGTTCGCGTATATTT+GGG | 0.369538 | 5:+69867080 | MsG0580027864.01.T01:CDS |
| AGGACCAAAAGAAGCTCCTT+TGG | 0.376105 | 5:+69867287 | MsG0580027864.01.T01:CDS |
| CCATAAATTGGTTGGTGAAA+TGG | 0.381983 | 5:-69867144 | None:intergenic |
| ATATCTCAATCAACCTCATT+TGG | 0.389685 | 5:+69866681 | MsG0580027864.01.T01:CDS |
| CGGTGAGAAGAGGGCCTTTG+TGG | 0.401444 | 5:-69866655 | None:intergenic |
| GGAGCTTATCCTGGTTATGC+TGG | 0.412712 | 5:+69867345 | MsG0580027864.01.T01:CDS |
| TACAACGCTAATGGTGATAA+TGG | 0.420824 | 5:+69867402 | MsG0580027864.01.T01:CDS |
| GGTATTGAAATTTAAGTTGT+TGG | 0.428857 | 5:-69866634 | None:intergenic |
| GGAACGGTAACGAATCCTTT+TGG | 0.438734 | 5:+69867249 | MsG0580027864.01.T01:CDS |
| GATGTGGTTGTTCCTTGTTT+AGG | 0.441091 | 5:-69866767 | None:intergenic |
| TGAAAATATCCATTACCAAA+AGG | 0.461381 | 5:-69867264 | None:intergenic |
| TACGCTAAAGGAGCTTATCC+TGG | 0.473884 | 5:+69867336 | MsG0580027864.01.T01:CDS |
| GAAGCTGCTTCGGCTTGTAC+CGG | 0.475241 | 5:+69867309 | MsG0580027864.01.T01:CDS |
| TGTACCGGTGTTTACGCTAA+AGG | 0.482677 | 5:+69867324 | MsG0580027864.01.T01:CDS |
| GCAACCAACGGTGCACTTTG+TGG | 0.494418 | 5:-69867168 | None:intergenic |
| TCAATCAACCTCATTTGGTA+TGG | 0.498550 | 5:+69866686 | MsG0580027864.01.T01:CDS |
| AATAACGATGTAGGTCTTGA+CGG | 0.500974 | 5:+69867195 | MsG0580027864.01.T01:CDS |
| AACTTCAGCTTGTTCTACAT+TGG | 0.507055 | 5:+69867461 | MsG0580027864.01.T01:CDS |
| GGTGCTAGCTACAACGCTAA+TGG | 0.508260 | 5:+69867393 | MsG0580027864.01.T01:CDS |
| GAGCTTATCCTGGTTATGCT+GGG | 0.517406 | 5:+69867346 | MsG0580027864.01.T01:CDS |
| GGTTATGAAATCAGTTATGA+TGG | 0.539205 | 5:-69866732 | None:intergenic |
| CGATGTAGGTCTTGACGGAA+TGG | 0.541134 | 5:+69867200 | MsG0580027864.01.T01:CDS |
| AGATATTTCCGGTGAGAAGA+GGG | 0.541503 | 5:-69866664 | None:intergenic |
| AAGTTCGCGTATATTTGGGT+TGG | 0.543691 | 5:+69867084 | MsG0580027864.01.T01:CDS |
| TCGTTATTTGGTGCAACCAA+CGG | 0.547290 | 5:-69867180 | None:intergenic |
| AATTCTGAAACTCAATGTGC+TGG | 0.549654 | 5:+69867108 | MsG0580027864.01.T01:CDS |
| GTTATGATGGCTCTTTGAGA+TGG | 0.551294 | 5:-69866719 | None:intergenic |
| TTCCACCACGTGGCAACAGA+TGG | 0.552839 | 5:-69866794 | None:intergenic |
| GAGATATTTCCGGTGAGAAG+AGG | 0.553834 | 5:-69866665 | None:intergenic |
| CACAAAGGCCCTCTTCTCAC+CGG | 0.560896 | 5:+69866656 | MsG0580027864.01.T01:CDS |
| TCAAGTAGGTGTGGAACCCA+TGG | 0.564282 | 5:+69867024 | MsG0580027864.01.T01:intron |
| AAAAGGGCCCCAGCATAACC+AGG | 0.566264 | 5:-69867354 | None:intergenic |
| ACGCTAATGGTGATAATGGA+AGG | 0.567526 | 5:+69867406 | MsG0580027864.01.T01:CDS |
| AGCTTATCCTGGTTATGCTG+GGG | 0.590478 | 5:+69867347 | MsG0580027864.01.T01:CDS |
| TGGTCCACAAAGTGCACCGT+TGG | 0.596808 | 5:+69867164 | MsG0580027864.01.T01:CDS |
| GTTGCACCAAATAACGATGT+AGG | 0.601769 | 5:+69867186 | MsG0580027864.01.T01:CDS |
| TTGTTTAGGAGAAGAGAGTG+AGG | 0.609851 | 5:-69866753 | None:intergenic |
| TTTGTGGACCATAAATTGGT+TGG | 0.611426 | 5:-69867152 | None:intergenic |
| CTTAAATTTCAATACCACAA+AGG | 0.623830 | 5:+69866641 | MsG0580027864.01.T01:CDS |
| GTGCACCATAAGAAGAACCA+TGG | 0.635354 | 5:-69867041 | None:intergenic |
| CAAGCCGAAGCAGCTTCCAA+AGG | 0.645366 | 5:-69867303 | None:intergenic |
| TCACTCTCTTCTCCTAAACA+AGG | 0.648969 | 5:+69866755 | MsG0580027864.01.T01:CDS |
| TGCACCATAAGAAGAACCAT+GGG | 0.667974 | 5:-69867040 | None:intergenic |
| AATGTGCTGGTCAATGCGCA+TGG | 0.681885 | 5:+69867121 | MsG0580027864.01.T01:CDS |
| CACAACCATCTGTTGCCACG+TGG | 0.682786 | 5:+69866789 | MsG0580027864.01.T01:CDS |
| GGCAACAGATGGTTGTGATG+TGG | 0.684003 | 5:-69866783 | None:intergenic |
| AGCTCCTTTAGCGTAAACAC+CGG | 0.692829 | 5:-69867328 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTAGCTGATTTTTTATTGT+TGG | - | Chr5:69866846-69866865 | None:intergenic | 20.0% |
| ! | CTTAAATTTCAATACCACAA+AGG | + | Chr5:69866641-69866660 | MsG0580027864.01.T01:CDS | 25.0% |
| ! | TGAAAATATCCATTACCAAA+AGG | - | Chr5:69867267-69867286 | None:intergenic | 25.0% |
| !!! | ATTTTTTATTGTTGGTGAGT+TGG | - | Chr5:69866838-69866857 | None:intergenic | 25.0% |
| !!! | GGTATTGAAATTTAAGTTGT+TGG | - | Chr5:69866637-69866656 | None:intergenic | 25.0% |
| !!! | TTTGGTAATGGATATTTTCA+AGG | + | Chr5:69867267-69867286 | MsG0580027864.01.T01:CDS | 25.0% |
| AAACAAGTTCGCGTATATTT+GGG | + | Chr5:69867080-69867099 | MsG0580027864.01.T01:CDS | 30.0% | |
| ATATCTCAATCAACCTCATT+TGG | + | Chr5:69866681-69866700 | MsG0580027864.01.T01:CDS | 30.0% | |
| ATCCTTAAACTTGCATCAAA+AGG | + | Chr5:69866938-69866957 | MsG0580027864.01.T01:intron | 30.0% | |
| CAGTGAAATTGTGAGAAAAA+TGG | - | Chr5:69866573-69866592 | None:intergenic | 30.0% | |
| GGTTATGAAATCAGTTATGA+TGG | - | Chr5:69866735-69866754 | None:intergenic | 30.0% | |
| TTGATGCAAGTTTAAGGATT+TGG | - | Chr5:69866937-69866956 | None:intergenic | 30.0% | |
| ! | TGAATTTTCCATACCAAATG+AGG | - | Chr5:69866697-69866716 | None:intergenic | 30.0% |
| AATAACGATGTAGGTCTTGA+CGG | + | Chr5:69867195-69867214 | MsG0580027864.01.T01:CDS | 35.0% | |
| CCATTTCACCAACCAATTTA+TGG | + | Chr5:69867144-69867163 | MsG0580027864.01.T01:CDS | 35.0% | |
| CTCGATGAGAATTACTCTTT+AGG | + | Chr5:69866893-69866912 | MsG0580027864.01.T01:intron | 35.0% | |
| GAAACAAGTTCGCGTATATT+TGG | + | Chr5:69867079-69867098 | MsG0580027864.01.T01:CDS | 35.0% | |
| TACAACGCTAATGGTGATAA+TGG | + | Chr5:69867402-69867421 | MsG0580027864.01.T01:CDS | 35.0% | |
| TCAAGACCTACATCGTTATT+TGG | - | Chr5:69867195-69867214 | None:intergenic | 35.0% | |
| TCAATCAACCTCATTTGGTA+TGG | + | Chr5:69866686-69866705 | MsG0580027864.01.T01:CDS | 35.0% | |
| TTTGTGGACCATAAATTGGT+TGG | - | Chr5:69867155-69867174 | None:intergenic | 35.0% | |
| ! | AACTTCAGCTTGTTCTACAT+TGG | + | Chr5:69867461-69867480 | MsG0580027864.01.T01:CDS | 35.0% |
| ! | GAGGTTGATTGAGATATTTC+CGG | - | Chr5:69866678-69866697 | None:intergenic | 35.0% |
| ! | GTAACGAATCCTTTTGGTAA+TGG | + | Chr5:69867255-69867274 | MsG0580027864.01.T01:CDS | 35.0% |
| ! | GTAGAACAAGCTGAAGTTTT+AGG | - | Chr5:69867459-69867478 | None:intergenic | 35.0% |
| ! | GTCCTTTTGATGCAAGTTTA+AGG | - | Chr5:69866943-69866962 | None:intergenic | 35.0% |
| ! | TTGACGGTTTTTGTTCAAGT+AGG | + | Chr5:69867010-69867029 | MsG0580027864.01.T01:intron | 35.0% |
| !! | AATTCTGAAACTCAATGTGC+TGG | + | Chr5:69867108-69867127 | MsG0580027864.01.T01:CDS | 35.0% |
| !! | CCATAAATTGGTTGGTGAAA+TGG | - | Chr5:69867147-69867166 | None:intergenic | 35.0% |
| !!! | AATGTTGCTAGTCTTTTAGC+TGG | + | Chr5:69867228-69867247 | MsG0580027864.01.T01:CDS | 35.0% |
| !!! | ACTTGTTTTGTCCACCAAAA+GGG | - | Chr5:69867373-69867392 | None:intergenic | 35.0% |
| AAGTTCGCGTATATTTGGGT+TGG | + | Chr5:69867084-69867103 | MsG0580027864.01.T01:CDS | 40.0% | |
| AGATATTTCCGGTGAGAAGA+GGG | - | Chr5:69866667-69866686 | None:intergenic | 40.0% | |
| AGCTGTTAGAACAACGTTGA+TGG | - | Chr5:69866977-69866996 | None:intergenic | 40.0% | |
| GCACTTTGTGGACCATAAAT+TGG | - | Chr5:69867159-69867178 | None:intergenic | 40.0% | |
| GCTAAACTAACTCTCTCACT+AGG | + | Chr5:69866860-69866879 | MsG0580027864.01.T01:intron | 40.0% | |
| GTTGCACCAAATAACGATGT+AGG | + | Chr5:69867186-69867205 | MsG0580027864.01.T01:CDS | 40.0% | |
| TCACTCTCTTCTCCTAAACA+AGG | + | Chr5:69866755-69866774 | MsG0580027864.01.T01:CDS | 40.0% | |
| TCTTATGGTGCACGTGTAAA+TGG | + | Chr5:69867051-69867070 | MsG0580027864.01.T01:CDS | 40.0% | |
| TGCACCATAAGAAGAACCAT+GGG | - | Chr5:69867043-69867062 | None:intergenic | 40.0% | |
| TTGTTTAGGAGAAGAGAGTG+AGG | - | Chr5:69866756-69866775 | None:intergenic | 40.0% | |
| ! | CGATTCAGTGAGTTTTCTAG+CGG | - | Chr5:69866612-69866631 | None:intergenic | 40.0% |
| ! | GATGTGGTTGTTCCTTGTTT+AGG | - | Chr5:69866770-69866789 | None:intergenic | 40.0% |
| ! | GGTTTTTGTTCAAGTAGGTG+TGG | + | Chr5:69867015-69867034 | MsG0580027864.01.T01:intron | 40.0% |
| ! | GTTATGATGGCTCTTTGAGA+TGG | - | Chr5:69866722-69866741 | None:intergenic | 40.0% |
| !! | ACGCTAATGGTGATAATGGA+AGG | + | Chr5:69867406-69867425 | MsG0580027864.01.T01:CDS | 40.0% |
| !! | CTTTTGGTGGACAAAACAAG+TGG | + | Chr5:69867372-69867391 | MsG0580027864.01.T01:CDS | 40.0% |
| !! | TCGTTATTTGGTGCAACCAA+CGG | - | Chr5:69867183-69867202 | None:intergenic | 40.0% |
| !!! | CACTTGTTTTGTCCACCAAA+AGG | - | Chr5:69867374-69867393 | None:intergenic | 40.0% |
| !!! | GTTTTAGGATCAACAATCGC+AGG | - | Chr5:69867444-69867463 | None:intergenic | 40.0% |
| !!! | TGCTAGTCTTTTAGCTGGAA+CGG | + | Chr5:69867233-69867252 | MsG0580027864.01.T01:CDS | 40.0% |
| AGCTCCTTTAGCGTAAACAC+CGG | - | Chr5:69867331-69867350 | None:intergenic | 45.0% | |
| AGCTTATCCTGGTTATGCTG+GGG | + | Chr5:69867347-69867366 | MsG0580027864.01.T01:CDS | 45.0% | |
| AGGACCAAAAGAAGCTCCTT+TGG | + | Chr5:69867287-69867306 | MsG0580027864.01.T01:CDS | 45.0% | |
| GAGATATTTCCGGTGAGAAG+AGG | - | Chr5:69866668-69866687 | None:intergenic | 45.0% | |
| GAGCTTATCCTGGTTATGCT+GGG | + | Chr5:69867346-69867365 | MsG0580027864.01.T01:CDS | 45.0% | |
| GCTGCTGATGTGTTAGTTGA+CGG | + | Chr5:69866994-69867013 | MsG0580027864.01.T01:intron | 45.0% | |
| GGAACCCATGGTTCTTCTTA+TGG | + | Chr5:69867036-69867055 | MsG0580027864.01.T01:CDS | 45.0% | |
| GTGCACCATAAGAAGAACCA+TGG | - | Chr5:69867044-69867063 | None:intergenic | 45.0% | |
| TACGCTAAAGGAGCTTATCC+TGG | + | Chr5:69867336-69867355 | MsG0580027864.01.T01:CDS | 45.0% | |
| ! | GCTTCCAAAGGAGCTTCTTT+TGG | - | Chr5:69867294-69867313 | None:intergenic | 45.0% |
| ! | GGAACGGTAACGAATCCTTT+TGG | + | Chr5:69867249-69867268 | MsG0580027864.01.T01:CDS | 45.0% |
| ! | TGTACCGGTGTTTACGCTAA+AGG | + | Chr5:69867324-69867343 | MsG0580027864.01.T01:CDS | 45.0% |
| ! | TTCAGTTGATTTCCACCACG+TGG | - | Chr5:69866807-69866826 | None:intergenic | 45.0% |
| CGATGTAGGTCTTGACGGAA+TGG | + | Chr5:69867200-69867219 | MsG0580027864.01.T01:CDS | 50.0% | |
| GGAGCTTATCCTGGTTATGC+TGG | + | Chr5:69867345-69867364 | MsG0580027864.01.T01:CDS | 50.0% | |
| GGCAACAGATGGTTGTGATG+TGG | - | Chr5:69866786-69866805 | None:intergenic | 50.0% | |
| GGTGCTAGCTACAACGCTAA+TGG | + | Chr5:69867393-69867412 | MsG0580027864.01.T01:CDS | 50.0% | |
| TCAAGTAGGTGTGGAACCCA+TGG | + | Chr5:69867024-69867043 | MsG0580027864.01.T01:intron | 50.0% | |
| ! | AATGTGCTGGTCAATGCGCA+TGG | + | Chr5:69867121-69867140 | MsG0580027864.01.T01:CDS | 50.0% |
| ! | AGCTCCTTTGGAAGCTGCTT+CGG | + | Chr5:69867299-69867318 | MsG0580027864.01.T01:CDS | 50.0% |
| AAAAGGGCCCCAGCATAACC+AGG | - | Chr5:69867357-69867376 | None:intergenic | 55.0% | |
| AACCATCTGTTGCCACGTGG+TGG | + | Chr5:69866792-69866811 | MsG0580027864.01.T01:intron | 55.0% | |
| CAAGCCGAAGCAGCTTCCAA+AGG | - | Chr5:69867306-69867325 | None:intergenic | 55.0% | |
| CACAAAGGCCCTCTTCTCAC+CGG | + | Chr5:69866656-69866675 | MsG0580027864.01.T01:CDS | 55.0% | |
| CACAACCATCTGTTGCCACG+TGG | + | Chr5:69866789-69866808 | MsG0580027864.01.T01:CDS | 55.0% | |
| GCAACCAACGGTGCACTTTG+TGG | - | Chr5:69867171-69867190 | None:intergenic | 55.0% | |
| TGGTCCACAAAGTGCACCGT+TGG | + | Chr5:69867164-69867183 | MsG0580027864.01.T01:CDS | 55.0% | |
| TTCCACCACGTGGCAACAGA+TGG | - | Chr5:69866797-69866816 | None:intergenic | 55.0% | |
| ! | GAAGCTGCTTCGGCTTGTAC+CGG | + | Chr5:69867309-69867328 | MsG0580027864.01.T01:CDS | 55.0% |
| ! | TGGTTATGCTGGGGCCCTTT+TGG | + | Chr5:69867356-69867375 | MsG0580027864.01.T01:CDS | 55.0% |
| ! | TTATGCTGGGGCCCTTTTGG+TGG | + | Chr5:69867359-69867378 | MsG0580027864.01.T01:CDS | 55.0% |
| CGGTGAGAAGAGGGCCTTTG+TGG | - | Chr5:69866658-69866677 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr5 | gene | 69866539 | 69867488 | 69866539 | ID=MsG0580027864.01;Name=MsG0580027864.01 |
| Chr5 | mRNA | 69866539 | 69867488 | 69866539 | ID=MsG0580027864.01.T01;Parent=MsG0580027864.01;Name=MsG0580027864.01.T01;_AED=0.50;_eAED=0.50;_QI=0|0|0|1|1|1|2|0|242 |
| Chr5 | exon | 69866539 | 69866810 | 69866539 | ID=MsG0580027864.01.T01:exon:25482;Parent=MsG0580027864.01.T01 |
| Chr5 | exon | 69867032 | 69867488 | 69867032 | ID=MsG0580027864.01.T01:exon:25483;Parent=MsG0580027864.01.T01 |
| Chr5 | CDS | 69866539 | 69866810 | 69866539 | ID=MsG0580027864.01.T01:cds;Parent=MsG0580027864.01.T01 |
| Chr5 | CDS | 69867032 | 69867488 | 69867032 | ID=MsG0580027864.01.T01:cds;Parent=MsG0580027864.01.T01 |
| Gene Sequence |
| Protein sequence |
