Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580027860.01.T01 | XP_013454048.2 | 97.46 | 315 | 8 | 0 | 1 | 315 | 25 | 339 | 0 | 631 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580027860.01.T01 | O82161 | 75 | 312 | 68 | 5 | 9 | 315 | 7 | 313 | 2.16E-164 | 462 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580027860.01.T01 | G7KBB9 | 97.460 | 315 | 8 | 0 | 1 | 315 | 1 | 315 | 0.0 | 629 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0580027860.01 | MsG0580027863.01 | 0.889635 | 2.031000e-73 | 1.652104e-69 |
| MsG0580027860.01 | MsG0580027864.01 | 0.854640 | 1.075621e-61 | 2.418351e-58 |
| MsG0580027860.01 | MsG0580027875.01 | 0.907947 | 2.917821e-81 | 5.295148e-77 |
| MsG0580027860.01 | MsG0580027876.01 | 0.938979 | 2.738819e-99 | 2.735308e-94 |
| MsG0580027860.01 | MsG0580027877.01 | 0.826332 | 2.875401e-54 | 2.688401e-51 |
| MsG0580027860.01 | MsG0580028371.01 | 0.914236 | 2.429904e-84 | 5.975891e-80 |
| MsG0580027860.01 | MsG0580028377.01 | 0.828750 | 7.556414e-55 | 7.578559e-52 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580027860.01.T01 | MTR_5g464340 | 97.460 | 315 | 8 | 0 | 1 | 315 | 1 | 315 | 0.0 | 629 |
| MsG0580027860.01.T01 | MTR_5g064340 | 97.460 | 315 | 8 | 0 | 1 | 315 | 1 | 315 | 0.0 | 629 |
| MsG0580027860.01.T01 | MTR_5g064345 | 96.190 | 315 | 12 | 0 | 1 | 315 | 1 | 315 | 0.0 | 620 |
| MsG0580027860.01.T01 | MTR_5g064360 | 94.937 | 316 | 15 | 1 | 1 | 315 | 1 | 316 | 0.0 | 612 |
| MsG0580027860.01.T01 | MTR_3g074860 | 79.252 | 294 | 48 | 3 | 22 | 315 | 24 | 304 | 7.47e-172 | 478 |
| MsG0580027860.01.T01 | MTR_3g074890 | 78.912 | 294 | 49 | 4 | 22 | 315 | 24 | 304 | 3.42e-170 | 474 |
| MsG0580027860.01.T01 | MTR_3g074830 | 72.115 | 312 | 82 | 4 | 8 | 315 | 35 | 345 | 1.28e-155 | 439 |
| MsG0580027860.01.T01 | MTR_4g094240 | 62.105 | 285 | 94 | 3 | 31 | 315 | 30 | 300 | 1.19e-123 | 356 |
| MsG0580027860.01.T01 | MTR_2g009070 | 54.248 | 306 | 124 | 6 | 11 | 315 | 14 | 304 | 9.72e-120 | 347 |
| MsG0580027860.01.T01 | MTR_4g033790 | 35.811 | 296 | 168 | 8 | 16 | 300 | 45 | 329 | 3.52e-48 | 165 |
| MsG0580027860.01.T01 | MTR_1g076470 | 34.967 | 306 | 178 | 7 | 18 | 312 | 46 | 341 | 3.64e-47 | 162 |
| MsG0580027860.01.T01 | MTR_8g071310 | 70.588 | 68 | 20 | 0 | 248 | 315 | 18 | 85 | 4.55e-27 | 102 |
| MsG0580027860.01.T01 | MTR_8g088900 | 75.385 | 65 | 16 | 0 | 251 | 315 | 308 | 372 | 1.52e-25 | 105 |
| MsG0580027860.01.T01 | MTR_4g013230 | 75.385 | 65 | 13 | 1 | 251 | 315 | 79 | 140 | 2.59e-25 | 99.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580027860.01.T01 | AT4G08950 | 73.579 | 299 | 69 | 6 | 23 | 315 | 20 | 314 | 1.94e-151 | 427 |
| MsG0580027860.01.T01 | AT1G35140 | 64.331 | 314 | 106 | 3 | 1 | 314 | 1 | 308 | 1.96e-144 | 409 |
| MsG0580027860.01.T01 | AT5G64260 | 58.044 | 317 | 119 | 6 | 1 | 315 | 1 | 305 | 2.25e-122 | 353 |
| MsG0580027860.01.T01 | AT5G09440 | 59.489 | 274 | 82 | 7 | 44 | 315 | 32 | 278 | 5.22e-103 | 303 |
| MsG0580027860.01.T01 | AT5G51550 | 35.974 | 303 | 172 | 8 | 21 | 312 | 40 | 331 | 3.82e-49 | 167 |
| MsG0580027860.01.T01 | AT3G02970 | 31.773 | 299 | 168 | 7 | 46 | 313 | 37 | 330 | 3.24e-46 | 159 |
| MsG0580027860.01.T01 | AT2G35150 | 34.877 | 324 | 182 | 11 | 8 | 311 | 2 | 316 | 2.65e-44 | 154 |
| MsG0580027860.01.T01 | AT2G17230 | 33.007 | 306 | 183 | 9 | 19 | 312 | 62 | 357 | 4.50e-43 | 152 |
Find 67 sgRNAs with CRISPR-Local
Find 83 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCATTTCACCAACCAATTTA+TGG | 0.182864 | 5:+69814979 | MsG0580027860.01.T01:CDS |
| TTGATGCGAGTTTAAGAATT+TGG | 0.184159 | 5:-69814768 | None:intergenic |
| TCAAGACCCACATCGTTATT+TGG | 0.213136 | 5:-69815027 | None:intergenic |
| TCTTATGGAGCACGCGTAAA+TGG | 0.252501 | 5:+69814886 | MsG0580027860.01.T01:CDS |
| GGAACCCATGGTTCTTCTTA+TGG | 0.253396 | 5:+69814871 | MsG0580027860.01.T01:CDS |
| CTTGACGAGAATTACTCTTT+AGG | 0.286620 | 5:+69814727 | MsG0580027860.01.T01:CDS |
| TGGTTATGCTGGGGACCTTT+TGG | 0.299405 | 5:+69815191 | MsG0580027860.01.T01:CDS |
| GCACTTTGTGGACCATAAAT+TGG | 0.307975 | 5:-69814991 | None:intergenic |
| GCTTCCAAAGGAGCTTCTTT+TGG | 0.308698 | 5:-69815126 | None:intergenic |
| GAAACAAGTTCGCGTACATT+TGG | 0.347338 | 5:+69814914 | MsG0580027860.01.T01:CDS |
| AAATTTCCGTAAACCTCATT+TGG | 0.349271 | 5:+69814515 | MsG0580027860.01.T01:CDS |
| TCCATACCAAATGAGGTTTA+CGG | 0.350588 | 5:-69814521 | None:intergenic |
| GTTAACTGATTTCTTGTTGT+TGG | 0.351760 | 5:-69814677 | None:intergenic |
| AGCTCCTTTGGAAGCTGCTT+CGG | 0.362716 | 5:+69815134 | MsG0580027860.01.T01:CDS |
| AGGACCAAAAGAAGCTCCTT+TGG | 0.376105 | 5:+69815122 | MsG0580027860.01.T01:CDS |
| CCATAAATTGGTTGGTGAAA+TGG | 0.381983 | 5:-69814979 | None:intergenic |
| AATAACGATGTGGGTCTTGA+TGG | 0.390121 | 5:+69815030 | MsG0580027860.01.T01:CDS |
| TATAACGCAAATGGTGATAA+TGG | 0.393265 | 5:+69815237 | MsG0580027860.01.T01:CDS |
| AAACAAGTTCGCGTACATTT+GGG | 0.409022 | 5:+69814915 | MsG0580027860.01.T01:CDS |
| GGAGCTTATCCTGGTTATGC+TGG | 0.426719 | 5:+69815180 | MsG0580027860.01.T01:CDS |
| GGAACCGTGACCAATCCTTT+TGG | 0.427628 | 5:+69815084 | MsG0580027860.01.T01:CDS |
| GGTATTGAAATTTAAGTTGT+TGG | 0.428857 | 5:-69814468 | None:intergenic |
| TCCGTAAACCTCATTTGGTA+TGG | 0.445565 | 5:+69814520 | MsG0580027860.01.T01:CDS |
| CTAACACATCAGCAGCTGTT+AGG | 0.451358 | 5:-69814822 | None:intergenic |
| TGAAAATATCCATTACCAAA+AGG | 0.461381 | 5:-69815099 | None:intergenic |
| ATTTCTTGTTGTTGGTGAGT+TGG | 0.466156 | 5:-69814669 | None:intergenic |
| GCAACCAATGGTGCACTTTG+TGG | 0.466845 | 5:-69815003 | None:intergenic |
| CGGTTAGAAGAGGACCTTTG+TGG | 0.467173 | 5:-69814489 | None:intergenic |
| CACAAAGGTCCTCTTCTAAC+CGG | 0.469717 | 5:+69814490 | MsG0580027860.01.T01:CDS |
| GAAGCTGCTTCGGCTTGTAC+CGG | 0.475241 | 5:+69815144 | MsG0580027860.01.T01:CDS |
| TGTACCGGTGTTTATGCTAA+AGG | 0.481549 | 5:+69815159 | MsG0580027860.01.T01:CDS |
| ATTCTTAAACTCGCATCAAA+AGG | 0.483182 | 5:+69814772 | MsG0580027860.01.T01:CDS |
| AGCTGTTAGGACAACGTTGA+TGG | 0.491013 | 5:-69814809 | None:intergenic |
| GAGTACCTAGTGAGAGAGCT+AGG | 0.494212 | 5:-69814699 | None:intergenic |
| TATGCTAAAGGAGCTTATCC+TGG | 0.497752 | 5:+69815171 | MsG0580027860.01.T01:CDS |
| TGGTCCACAAAGTGCACCAT+TGG | 0.507521 | 5:+69814999 | MsG0580027860.01.T01:CDS |
| ATATCCATTACCAAAAGGAT+TGG | 0.518887 | 5:-69815094 | None:intergenic |
| TCGTTATTTGGTGCAACCAA+TGG | 0.521248 | 5:-69815015 | None:intergenic |
| GAGCTTATCCTGGTTATGCT+GGG | 0.526776 | 5:+69815181 | MsG0580027860.01.T01:CDS |
| GGTGCTAGCTATAACGCAAA+TGG | 0.528973 | 5:+69815228 | MsG0580027860.01.T01:CDS |
| AACCTCAGCTTGTTCTACAT+TGG | 0.544398 | 5:+69815296 | MsG0580027860.01.T01:CDS |
| AATTCTGAAACTCAATGTGC+TGG | 0.549654 | 5:+69814943 | MsG0580027860.01.T01:CDS |
| GTTATGATCGCTCGTTGAGA+TGG | 0.550978 | 5:-69814553 | None:intergenic |
| GCTGCTGATGTGTTAGTTGA+CGG | 0.552796 | 5:+69814829 | MsG0580027860.01.T01:CDS |
| CGATGTGGGTCTTGATGGAA+TGG | 0.552866 | 5:+69815035 | MsG0580027860.01.T01:CDS |
| ACGCAAATGGTGATAATGGA+AGG | 0.560708 | 5:+69815241 | MsG0580027860.01.T01:CDS |
| AAGTTCGCGTACATTTGGGT+TGG | 0.562836 | 5:+69814919 | MsG0580027860.01.T01:CDS |
| TCAAGTAGGTGTGGAACCCA+TGG | 0.564282 | 5:+69814859 | MsG0580027860.01.T01:CDS |
| AAAAGGTCCCCAGCATAACC+AGG | 0.566674 | 5:-69815189 | None:intergenic |
| GTTAACCTAGCTCTCTCACT+AGG | 0.568709 | 5:+69814694 | MsG0580027860.01.T01:CDS |
| TACCAATGTAGAACAAGCTG+AGG | 0.574594 | 5:-69815298 | None:intergenic |
| TTCCACCACGTGGCAACTGA+TGG | 0.582258 | 5:-69814628 | None:intergenic |
| TGCTCCATAAGAAGAACCAT+GGG | 0.584910 | 5:-69814875 | None:intergenic |
| AACCATCAGTTGCCACGTGG+TGG | 0.610757 | 5:+69814626 | MsG0580027860.01.T01:CDS |
| TTTGTGGACCATAAATTGGT+TGG | 0.611426 | 5:-69814987 | None:intergenic |
| GTGCTCCATAAGAAGAACCA+TGG | 0.622936 | 5:-69814876 | None:intergenic |
| GGTTGCACCAAATAACGATG+TGG | 0.628110 | 5:+69815020 | MsG0580027860.01.T01:CDS |
| CTTAAATTTCAATACCACAA+AGG | 0.628204 | 5:+69814475 | MsG0580027860.01.T01:CDS |
| AGCTTATCCTGGTTATGCTG+GGG | 0.628401 | 5:+69815182 | MsG0580027860.01.T01:CDS |
| ATTACCAAAAGGATTGGTCA+CGG | 0.640683 | 5:-69815088 | None:intergenic |
| CAAGCCGAAGCAGCTTCCAA+AGG | 0.645366 | 5:-69815138 | None:intergenic |
| TTCGGTTGATTTCCACCACG+TGG | 0.652662 | 5:-69814638 | None:intergenic |
| GTTGCACCAAATAACGATGT+GGG | 0.661869 | 5:+69815021 | MsG0580027860.01.T01:CDS |
| GGCAACTGATGGTTGTGATG+TGG | 0.667076 | 5:-69814617 | None:intergenic |
| AATGTGCTGGTCAATGCGCA+TGG | 0.681885 | 5:+69814956 | MsG0580027860.01.T01:CDS |
| AGCTCCTTTAGCATAAACAC+CGG | 0.684494 | 5:-69815163 | None:intergenic |
| CACAACCATCAGTTGCCACG+TGG | 0.702852 | 5:+69814623 | MsG0580027860.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | CTTAAATTTCAATACCACAA+AGG | + | Chr5:69814475-69814494 | MsG0580027860.01.T01:CDS | 25.0% |
| ! | TGAAAATATCCATTACCAAA+AGG | - | Chr5:69815102-69815121 | None:intergenic | 25.0% |
| !!! | GGTATTGAAATTTAAGTTGT+TGG | - | Chr5:69814471-69814490 | None:intergenic | 25.0% |
| !!! | TTTGGTAATGGATATTTTCA+AGG | + | Chr5:69815102-69815121 | MsG0580027860.01.T01:CDS | 25.0% |
| AAATTTCCGTAAACCTCATT+TGG | + | Chr5:69814515-69814534 | MsG0580027860.01.T01:CDS | 30.0% | |
| ATATCCATTACCAAAAGGAT+TGG | - | Chr5:69815097-69815116 | None:intergenic | 30.0% | |
| ATTCTTAAACTCGCATCAAA+AGG | + | Chr5:69814772-69814791 | MsG0580027860.01.T01:CDS | 30.0% | |
| TATAACGCAAATGGTGATAA+TGG | + | Chr5:69815237-69815256 | MsG0580027860.01.T01:CDS | 30.0% | |
| TTGATGCGAGTTTAAGAATT+TGG | - | Chr5:69814771-69814790 | None:intergenic | 30.0% | |
| ! | GTTAACTGATTTCTTGTTGT+TGG | - | Chr5:69814680-69814699 | None:intergenic | 30.0% |
| ! | TGAATTTTCCATACCAAATG+AGG | - | Chr5:69814531-69814550 | None:intergenic | 30.0% |
| !!! | GATGTGGTTGTTTGTTTTTT+AGG | - | Chr5:69814604-69814623 | None:intergenic | 30.0% |
| !!! | GGTGAGTTGGTAATATTTTT+CGG | - | Chr5:69814659-69814678 | None:intergenic | 30.0% |
| !!! | TTTTTTAGGAGAAGAAAGTG+AGG | - | Chr5:69814590-69814609 | None:intergenic | 30.0% |
| AAACAAGTTCGCGTACATTT+GGG | + | Chr5:69814915-69814934 | MsG0580027860.01.T01:CDS | 35.0% | |
| CCATTTCACCAACCAATTTA+TGG | + | Chr5:69814979-69814998 | MsG0580027860.01.T01:CDS | 35.0% | |
| CTTGACGAGAATTACTCTTT+AGG | + | Chr5:69814727-69814746 | MsG0580027860.01.T01:CDS | 35.0% | |
| TCCATACCAAATGAGGTTTA+CGG | - | Chr5:69814524-69814543 | None:intergenic | 35.0% | |
| TTTGTGGACCATAAATTGGT+TGG | - | Chr5:69814990-69815009 | None:intergenic | 35.0% | |
| ! | GAGGTTTACGGAAATTTTAC+CGG | - | Chr5:69814512-69814531 | None:intergenic | 35.0% |
| !! | AATTCTGAAACTCAATGTGC+TGG | + | Chr5:69814943-69814962 | MsG0580027860.01.T01:CDS | 35.0% |
| !! | ATTACCAAAAGGATTGGTCA+CGG | - | Chr5:69815091-69815110 | None:intergenic | 35.0% |
| !! | ATTTCTTGTTGTTGGTGAGT+TGG | - | Chr5:69814672-69814691 | None:intergenic | 35.0% |
| !! | CCATAAATTGGTTGGTGAAA+TGG | - | Chr5:69814982-69815001 | None:intergenic | 35.0% |
| !! | GAAATTTTACCGGTTAGAAG+AGG | - | Chr5:69814502-69814521 | None:intergenic | 35.0% |
| !!! | TTGACGGATTTTGTTCAAGT+AGG | + | Chr5:69814845-69814864 | MsG0580027860.01.T01:CDS | 35.0% |
| AATAACGATGTGGGTCTTGA+TGG | + | Chr5:69815030-69815049 | MsG0580027860.01.T01:CDS | 40.0% | |
| AGCTCCTTTAGCATAAACAC+CGG | - | Chr5:69815166-69815185 | None:intergenic | 40.0% | |
| GAAACAAGTTCGCGTACATT+TGG | + | Chr5:69814914-69814933 | MsG0580027860.01.T01:CDS | 40.0% | |
| GCACTTTGTGGACCATAAAT+TGG | - | Chr5:69814994-69815013 | None:intergenic | 40.0% | |
| GTTGCACCAAATAACGATGT+GGG | + | Chr5:69815021-69815040 | MsG0580027860.01.T01:CDS | 40.0% | |
| TACCAATGTAGAACAAGCTG+AGG | - | Chr5:69815301-69815320 | None:intergenic | 40.0% | |
| TATGCTAAAGGAGCTTATCC+TGG | + | Chr5:69815171-69815190 | MsG0580027860.01.T01:CDS | 40.0% | |
| TCAAGACCCACATCGTTATT+TGG | - | Chr5:69815030-69815049 | None:intergenic | 40.0% | |
| TCCGTAAACCTCATTTGGTA+TGG | + | Chr5:69814520-69814539 | MsG0580027860.01.T01:CDS | 40.0% | |
| TGCTCCATAAGAAGAACCAT+GGG | - | Chr5:69814878-69814897 | None:intergenic | 40.0% | |
| ! | AACCTCAGCTTGTTCTACAT+TGG | + | Chr5:69815296-69815315 | MsG0580027860.01.T01:CDS | 40.0% |
| ! | GGATTTTGTTCAAGTAGGTG+TGG | + | Chr5:69814850-69814869 | MsG0580027860.01.T01:CDS | 40.0% |
| ! | GTAGAACAAGCTGAGGTTTT+AGG | - | Chr5:69815294-69815313 | None:intergenic | 40.0% |
| ! | GTGACCAATCCTTTTGGTAA+TGG | + | Chr5:69815090-69815109 | MsG0580027860.01.T01:CDS | 40.0% |
| ! | TGTACCGGTGTTTATGCTAA+AGG | + | Chr5:69815159-69815178 | MsG0580027860.01.T01:CDS | 40.0% |
| !! | ACGCAAATGGTGATAATGGA+AGG | + | Chr5:69815241-69815260 | MsG0580027860.01.T01:CDS | 40.0% |
| !! | CTTTTGGTGGACAAAACAAG+TGG | + | Chr5:69815207-69815226 | MsG0580027860.01.T01:CDS | 40.0% |
| !! | TCGTTATTTGGTGCAACCAA+TGG | - | Chr5:69815018-69815037 | None:intergenic | 40.0% |
| !!! | AATGTCGCTAGTCTTTTAGC+TGG | + | Chr5:69815063-69815082 | MsG0580027860.01.T01:CDS | 40.0% |
| !!! | CACTTGTTTTGTCCACCAAA+AGG | - | Chr5:69815209-69815228 | None:intergenic | 40.0% |
| AAGTTCGCGTACATTTGGGT+TGG | + | Chr5:69814919-69814938 | MsG0580027860.01.T01:CDS | 45.0% | |
| AGCTGTTAGGACAACGTTGA+TGG | - | Chr5:69814812-69814831 | None:intergenic | 45.0% | |
| AGCTTATCCTGGTTATGCTG+GGG | + | Chr5:69815182-69815201 | MsG0580027860.01.T01:CDS | 45.0% | |
| AGGACCAAAAGAAGCTCCTT+TGG | + | Chr5:69815122-69815141 | MsG0580027860.01.T01:CDS | 45.0% | |
| CACAAAGGTCCTCTTCTAAC+CGG | + | Chr5:69814490-69814509 | MsG0580027860.01.T01:CDS | 45.0% | |
| CTAACACATCAGCAGCTGTT+AGG | - | Chr5:69814825-69814844 | None:intergenic | 45.0% | |
| GAGCTTATCCTGGTTATGCT+GGG | + | Chr5:69815181-69815200 | MsG0580027860.01.T01:CDS | 45.0% | |
| GCTGCTGATGTGTTAGTTGA+CGG | + | Chr5:69814829-69814848 | MsG0580027860.01.T01:CDS | 45.0% | |
| GGAACCCATGGTTCTTCTTA+TGG | + | Chr5:69814871-69814890 | MsG0580027860.01.T01:CDS | 45.0% | |
| GGTGCTAGCTATAACGCAAA+TGG | + | Chr5:69815228-69815247 | MsG0580027860.01.T01:CDS | 45.0% | |
| GGTTGCACCAAATAACGATG+TGG | + | Chr5:69815020-69815039 | MsG0580027860.01.T01:CDS | 45.0% | |
| GTGCTCCATAAGAAGAACCA+TGG | - | Chr5:69814879-69814898 | None:intergenic | 45.0% | |
| GTTATGATCGCTCGTTGAGA+TGG | - | Chr5:69814556-69814575 | None:intergenic | 45.0% | |
| TCTTATGGAGCACGCGTAAA+TGG | + | Chr5:69814886-69814905 | MsG0580027860.01.T01:CDS | 45.0% | |
| ! | GCTTCCAAAGGAGCTTCTTT+TGG | - | Chr5:69815129-69815148 | None:intergenic | 45.0% |
| ! | GTTAACCTAGCTCTCTCACT+AGG | + | Chr5:69814694-69814713 | MsG0580027860.01.T01:CDS | 45.0% |
| !!! | GTTTTAGGATCAGCAATCGC+AGG | - | Chr5:69815279-69815298 | None:intergenic | 45.0% |
| AAAAGGTCCCCAGCATAACC+AGG | - | Chr5:69815192-69815211 | None:intergenic | 50.0% | |
| CGATGTGGGTCTTGATGGAA+TGG | + | Chr5:69815035-69815054 | MsG0580027860.01.T01:CDS | 50.0% | |
| CGGTTAGAAGAGGACCTTTG+TGG | - | Chr5:69814492-69814511 | None:intergenic | 50.0% | |
| GAGTACCTAGTGAGAGAGCT+AGG | - | Chr5:69814702-69814721 | None:intergenic | 50.0% | |
| GCAACCAATGGTGCACTTTG+TGG | - | Chr5:69815006-69815025 | None:intergenic | 50.0% | |
| GGAGCTTATCCTGGTTATGC+TGG | + | Chr5:69815180-69815199 | MsG0580027860.01.T01:CDS | 50.0% | |
| GGCAACTGATGGTTGTGATG+TGG | - | Chr5:69814620-69814639 | None:intergenic | 50.0% | |
| TCAAGTAGGTGTGGAACCCA+TGG | + | Chr5:69814859-69814878 | MsG0580027860.01.T01:CDS | 50.0% | |
| TGGTCCACAAAGTGCACCAT+TGG | + | Chr5:69814999-69815018 | MsG0580027860.01.T01:CDS | 50.0% | |
| ! | AATGTGCTGGTCAATGCGCA+TGG | + | Chr5:69814956-69814975 | MsG0580027860.01.T01:CDS | 50.0% |
| ! | AGCTCCTTTGGAAGCTGCTT+CGG | + | Chr5:69815134-69815153 | MsG0580027860.01.T01:CDS | 50.0% |
| ! | GGAACCGTGACCAATCCTTT+TGG | + | Chr5:69815084-69815103 | MsG0580027860.01.T01:CDS | 50.0% |
| ! | TGGTTATGCTGGGGACCTTT+TGG | + | Chr5:69815191-69815210 | MsG0580027860.01.T01:CDS | 50.0% |
| ! | TTATGCTGGGGACCTTTTGG+TGG | + | Chr5:69815194-69815213 | MsG0580027860.01.T01:CDS | 50.0% |
| ! | TTCGGTTGATTTCCACCACG+TGG | - | Chr5:69814641-69814660 | None:intergenic | 50.0% |
| AACCATCAGTTGCCACGTGG+TGG | + | Chr5:69814626-69814645 | MsG0580027860.01.T01:CDS | 55.0% | |
| CAAGCCGAAGCAGCTTCCAA+AGG | - | Chr5:69815141-69815160 | None:intergenic | 55.0% | |
| CACAACCATCAGTTGCCACG+TGG | + | Chr5:69814623-69814642 | MsG0580027860.01.T01:CDS | 55.0% | |
| TTCCACCACGTGGCAACTGA+TGG | - | Chr5:69814631-69814650 | None:intergenic | 55.0% | |
| ! | GAAGCTGCTTCGGCTTGTAC+CGG | + | Chr5:69815144-69815163 | MsG0580027860.01.T01:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr5 | gene | 69814376 | 69815323 | 69814376 | ID=MsG0580027860.01;Name=MsG0580027860.01 |
| Chr5 | mRNA | 69814376 | 69815323 | 69814376 | ID=MsG0580027860.01.T01;Parent=MsG0580027860.01;Name=MsG0580027860.01.T01;_AED=0.50;_eAED=0.50;_QI=0|-1|0|1|-1|1|1|0|315 |
| Chr5 | exon | 69814376 | 69815323 | 69814376 | ID=MsG0580027860.01.T01:exon:25468;Parent=MsG0580027860.01.T01 |
| Chr5 | CDS | 69814376 | 69815323 | 69814376 | ID=MsG0580027860.01.T01:cds;Parent=MsG0580027860.01.T01 |
| Gene Sequence |
| Protein sequence |
