Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580027875.01.T01 | XP_013454048.2 | 94.921 | 315 | 16 | 0 | 1 | 315 | 25 | 339 | 0 | 618 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580027875.01.T01 | O82161 | 74.038 | 312 | 71 | 6 | 9 | 315 | 7 | 313 | 6.75E-161 | 454 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580027875.01.T01 | G7KBB9 | 94.921 | 315 | 16 | 0 | 1 | 315 | 1 | 315 | 0.0 | 617 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0480022642.01 | MsG0580027875.01 | 0.806452 | 8.170306e-50 | 4.436346e-47 |
| MsG0380015676.01 | MsG0580027875.01 | 0.818815 | 1.610146e-52 | 1.217813e-49 |
| MsG0380015862.01 | MsG0580027875.01 | 0.833787 | 4.363499e-56 | 5.078176e-53 |
| MsG0580027860.01 | MsG0580027875.01 | 0.907947 | 2.917821e-81 | 5.295148e-77 |
| MsG0580027863.01 | MsG0580027875.01 | 0.850486 | 1.646456e-60 | 3.229789e-57 |
| MsG0580027864.01 | MsG0580027875.01 | 0.839452 | 1.571653e-57 | 2.171397e-54 |
| MsG0580027875.01 | MsG0580027876.01 | 0.909055 | 8.690160e-82 | 1.659917e-77 |
| MsG0580027875.01 | MsG0580027877.01 | 0.800032 | 1.742784e-48 | 8.031729e-46 |
| MsG0580027875.01 | MsG0580028371.01 | 0.893188 | 7.928525e-75 | 7.478881e-71 |
| MsG0580027875.01 | MsG0580028377.01 | 0.867724 | 1.107770e-65 | 3.906771e-62 |
| MsG0580027875.01 | MsG0880047494.01 | 0.805529 | 1.277228e-49 | 6.772902e-47 |
| MsG0580027875.01 | MsG0880047496.01 | 0.813266 | 2.791619e-51 | 1.814477e-48 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580027875.01.T01 | MTR_5g464340 | 94.921 | 315 | 16 | 0 | 1 | 315 | 1 | 315 | 0.0 | 617 |
| MsG0580027875.01.T01 | MTR_5g064340 | 94.921 | 315 | 16 | 0 | 1 | 315 | 1 | 315 | 0.0 | 617 |
| MsG0580027875.01.T01 | MTR_5g064345 | 93.968 | 315 | 19 | 0 | 1 | 315 | 1 | 315 | 0.0 | 609 |
| MsG0580027875.01.T01 | MTR_5g064360 | 93.038 | 316 | 21 | 1 | 1 | 315 | 1 | 316 | 0.0 | 602 |
| MsG0580027875.01.T01 | MTR_3g074860 | 78.571 | 294 | 50 | 3 | 22 | 315 | 24 | 304 | 4.70e-170 | 474 |
| MsG0580027875.01.T01 | MTR_3g074890 | 78.231 | 294 | 51 | 4 | 22 | 315 | 24 | 304 | 2.10e-168 | 470 |
| MsG0580027875.01.T01 | MTR_3g074830 | 71.795 | 312 | 83 | 4 | 8 | 315 | 35 | 345 | 1.08e-153 | 434 |
| MsG0580027875.01.T01 | MTR_4g094240 | 61.053 | 285 | 97 | 3 | 31 | 315 | 30 | 300 | 4.30e-121 | 350 |
| MsG0580027875.01.T01 | MTR_2g009070 | 53.628 | 317 | 131 | 6 | 1 | 315 | 2 | 304 | 7.32e-120 | 347 |
| MsG0580027875.01.T01 | MTR_4g033790 | 36.082 | 291 | 164 | 8 | 21 | 300 | 50 | 329 | 2.40e-48 | 165 |
| MsG0580027875.01.T01 | MTR_1g076470 | 35.395 | 291 | 167 | 8 | 21 | 300 | 49 | 329 | 2.20e-45 | 157 |
| MsG0580027875.01.T01 | MTR_8g071310 | 69.118 | 68 | 21 | 0 | 248 | 315 | 18 | 85 | 1.13e-25 | 98.2 |
| MsG0580027875.01.T01 | MTR_4g013230 | 73.846 | 65 | 14 | 1 | 251 | 315 | 79 | 140 | 2.22e-24 | 96.7 |
| MsG0580027875.01.T01 | MTR_8g088900 | 73.846 | 65 | 17 | 0 | 251 | 315 | 308 | 372 | 3.36e-24 | 101 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580027875.01.T01 | AT4G08950 | 72.241 | 299 | 73 | 6 | 23 | 315 | 20 | 314 | 4.70e-148 | 419 |
| MsG0580027875.01.T01 | AT1G35140 | 64.013 | 314 | 107 | 2 | 1 | 314 | 1 | 308 | 4.10e-143 | 406 |
| MsG0580027875.01.T01 | AT5G64260 | 58.576 | 309 | 115 | 6 | 10 | 315 | 7 | 305 | 7.16e-122 | 352 |
| MsG0580027875.01.T01 | AT5G09440 | 58.759 | 274 | 84 | 6 | 44 | 315 | 32 | 278 | 8.15e-102 | 300 |
| MsG0580027875.01.T01 | AT5G51550 | 35.974 | 303 | 172 | 8 | 21 | 312 | 40 | 331 | 1.10e-48 | 166 |
| MsG0580027875.01.T01 | AT3G02970 | 31.438 | 299 | 169 | 7 | 46 | 313 | 37 | 330 | 3.30e-45 | 157 |
| MsG0580027875.01.T01 | AT2G35150 | 34.568 | 324 | 183 | 11 | 8 | 311 | 2 | 316 | 2.98e-44 | 154 |
| MsG0580027875.01.T01 | AT2G17230 | 32.680 | 306 | 184 | 9 | 19 | 312 | 62 | 357 | 5.55e-43 | 152 |
Find 63 sgRNAs with CRISPR-Local
Find 83 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAAGACCCACATCGTTATT+TGG | 0.213136 | 5:-70149260 | None:intergenic |
| TCTTATGGTGCACGCGTAAA+TGG | 0.225421 | 5:+70149119 | MsG0580027875.01.T01:CDS |
| GGAACCCATGGTTCTTCTTA+TGG | 0.283880 | 5:+70149104 | MsG0580027875.01.T01:CDS |
| CTTGACGAGAATTACTCTTT+AGG | 0.286620 | 5:+70148960 | MsG0580027875.01.T01:CDS |
| TGGTTATGCTGGGGCCCTTT+TGG | 0.286824 | 5:+70149424 | MsG0580027875.01.T01:CDS |
| GCACTTTGTGGACCATAAAT+TGG | 0.307975 | 5:-70149224 | None:intergenic |
| GCTTCCAAAGGAGCTTCTTT+TGG | 0.308698 | 5:-70149359 | None:intergenic |
| TCCATACCAAATGATGTTTA+CGG | 0.318337 | 5:-70148754 | None:intergenic |
| GAAACAAGTTCGCGTACATT+TGG | 0.347338 | 5:+70149147 | MsG0580027875.01.T01:CDS |
| AAATTTCCGTAAACATCATT+TGG | 0.360811 | 5:+70148748 | MsG0580027875.01.T01:CDS |
| AGCTCCTTTGGAAGCTGCTT+CGG | 0.362716 | 5:+70149367 | MsG0580027875.01.T01:CDS |
| CCATAAATTGGTTGGTGAAA+AGG | 0.364618 | 5:-70149212 | None:intergenic |
| TTGACGCGAGTTTAACGATT+TGG | 0.366058 | 5:-70149001 | None:intergenic |
| AGGACCAAAAGAAGCTCCTT+TGG | 0.376105 | 5:+70149355 | MsG0580027875.01.T01:CDS |
| CGGTTAAAAGAGGGCCTTTG+TGG | 0.388607 | 5:-70148722 | None:intergenic |
| AATAACGATGTGGGTCTTGA+TGG | 0.390121 | 5:+70149263 | MsG0580027875.01.T01:CDS |
| GCAGCTGATGTGTTAGTTGA+TGG | 0.407698 | 5:+70149062 | MsG0580027875.01.T01:CDS |
| AAACAAGTTCGCGTACATTT+GGG | 0.409022 | 5:+70149148 | MsG0580027875.01.T01:CDS |
| GGAGCTTATCCTGGTTATGC+TGG | 0.412712 | 5:+70149413 | MsG0580027875.01.T01:CDS |
| ATCGTTAAACTCGCGTCAAA+AGG | 0.419827 | 5:+70149005 | MsG0580027875.01.T01:CDS |
| TACAACGCTAATGGTGATAA+TGG | 0.420824 | 5:+70149470 | MsG0580027875.01.T01:CDS |
| GATGGTTGTGATGTGGTTGT+TGG | 0.425520 | 5:-70148843 | None:intergenic |
| TCCGTAAACATCATTTGGTA+TGG | 0.445565 | 5:+70148753 | MsG0580027875.01.T01:CDS |
| CTAACACATCAGCTGCTGTT+AGG | 0.449185 | 5:-70149055 | None:intergenic |
| GGAACCGTAACCAATCCTTT+TGG | 0.451430 | 5:+70149317 | MsG0580027875.01.T01:CDS |
| TGAAAATATCCATTACCAAA+AGG | 0.461381 | 5:-70149332 | None:intergenic |
| TGCTGTTAGGACAACGTTGA+TGG | 0.463697 | 5:-70149042 | None:intergenic |
| GCAACCAATGGTGCACTTTG+TGG | 0.466845 | 5:-70149236 | None:intergenic |
| GAAGCTGCTTCGGCTTGTAC+CGG | 0.475241 | 5:+70149377 | MsG0580027875.01.T01:CDS |
| TGTACCGGTGTTTATGCTAA+AGG | 0.481549 | 5:+70149392 | MsG0580027875.01.T01:CDS |
| ATATCCATTACCAAAAGGAT+TGG | 0.488324 | 5:-70149327 | None:intergenic |
| TATGCTAAAGGAGCTTATCC+TGG | 0.497752 | 5:+70149404 | MsG0580027875.01.T01:CDS |
| GTTATGATTGCTCTTTGAGA+TGG | 0.502947 | 5:-70148786 | None:intergenic |
| ATTACCAAAAGGATTGGTTA+CGG | 0.504727 | 5:-70149321 | None:intergenic |
| GAGTACCTAGCGAGAGAGCT+AGG | 0.504789 | 5:-70148932 | None:intergenic |
| TGGTCCACAAAGTGCACCAT+TGG | 0.507521 | 5:+70149232 | MsG0580027875.01.T01:CDS |
| GGTGCTAGCTACAACGCTAA+TGG | 0.508260 | 5:+70149461 | MsG0580027875.01.T01:CDS |
| GAGCTTATCCTGGTTATGCT+GGG | 0.517406 | 5:+70149414 | MsG0580027875.01.T01:CDS |
| TCGTTATTTGGTGCAACCAA+TGG | 0.521248 | 5:-70149248 | None:intergenic |
| AATTCTGAAACTCAATGTGC+TGG | 0.549654 | 5:+70149176 | MsG0580027875.01.T01:CDS |
| CGATGTGGGTCTTGATGGAA+TGG | 0.552866 | 5:+70149268 | MsG0580027875.01.T01:CDS |
| AAGTTCGCGTACATTTGGGT+TGG | 0.562836 | 5:+70149152 | MsG0580027875.01.T01:CDS |
| TCAAGTAGGTGTGGAACCCA+TGG | 0.564282 | 5:+70149092 | MsG0580027875.01.T01:CDS |
| AAAAGGGCCCCAGCATAACC+AGG | 0.566264 | 5:-70149422 | None:intergenic |
| ACGCTAATGGTGATAATGGA+AGG | 0.567526 | 5:+70149474 | MsG0580027875.01.T01:CDS |
| GTTAACCTAGCTCTCTCGCT+AGG | 0.568037 | 5:+70148927 | MsG0580027875.01.T01:CDS |
| AACCTCAGTTTGTTCTACGT+TGG | 0.574270 | 5:+70149529 | MsG0580027875.01.T01:CDS |
| TTCCACCACGTGGCAACTGA+TGG | 0.582258 | 5:-70148861 | None:intergenic |
| AGCTTATCCTGGTTATGCTG+GGG | 0.590478 | 5:+70149415 | MsG0580027875.01.T01:CDS |
| AACCATCAGTTGCCACGTGG+TGG | 0.610757 | 5:+70148859 | MsG0580027875.01.T01:CDS |
| TTTGTGGACCATAAATTGGT+TGG | 0.611426 | 5:-70149220 | None:intergenic |
| CTTAAATTTCAATACCACAA+AGG | 0.623830 | 5:+70148708 | MsG0580027875.01.T01:CDS |
| GTGCACCATAAGAAGAACCA+TGG | 0.625761 | 5:-70149109 | None:intergenic |
| GGTTGCACCAAATAACGATG+TGG | 0.628110 | 5:+70149253 | MsG0580027875.01.T01:CDS |
| CAAGCCGAAGCAGCTTCCAA+AGG | 0.645366 | 5:-70149371 | None:intergenic |
| TACCAACGTAGAACAAACTG+AGG | 0.649916 | 5:-70149531 | None:intergenic |
| TTCGGTTGATTTCCACCACG+TGG | 0.652662 | 5:-70148871 | None:intergenic |
| TGCACCATAAGAAGAACCAT+GGG | 0.655555 | 5:-70149108 | None:intergenic |
| AATGTGCTGGTCAATGCGCG+TGG | 0.660041 | 5:+70149189 | MsG0580027875.01.T01:CDS |
| GTTGCACCAAATAACGATGT+GGG | 0.661869 | 5:+70149254 | MsG0580027875.01.T01:CDS |
| GGCAACTGATGGTTGTGATG+TGG | 0.667076 | 5:-70148850 | None:intergenic |
| AGCTCCTTTAGCATAAACAC+CGG | 0.684494 | 5:-70149396 | None:intergenic |
| CACAACCATCAGTTGCCACG+TGG | 0.702852 | 5:+70148856 | MsG0580027875.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | AAATTTCCGTAAACATCATT+TGG | + | Chr5:70148748-70148767 | MsG0580027875.01.T01:CDS | 25.0% |
| ! | CTTAAATTTCAATACCACAA+AGG | + | Chr5:70148708-70148727 | MsG0580027875.01.T01:CDS | 25.0% |
| ! | TGAAAATATCCATTACCAAA+AGG | - | Chr5:70149335-70149354 | None:intergenic | 25.0% |
| !!! | AAATTTTACCGGTTAAAAGA+GGG | - | Chr5:70148734-70148753 | None:intergenic | 25.0% |
| !!! | AGTGAGTTGATAGTATTTTT+CGG | - | Chr5:70148892-70148911 | None:intergenic | 25.0% |
| !!! | TTTGGTAATGGATATTTTCA+AGG | + | Chr5:70149335-70149354 | MsG0580027875.01.T01:CDS | 25.0% |
| ATATCCATTACCAAAAGGAT+TGG | - | Chr5:70149330-70149349 | None:intergenic | 30.0% | |
| TCCATACCAAATGATGTTTA+CGG | - | Chr5:70148757-70148776 | None:intergenic | 30.0% | |
| ! | GATGTTTACGGAAATTTTAC+CGG | - | Chr5:70148745-70148764 | None:intergenic | 30.0% |
| !! | ATTACCAAAAGGATTGGTTA+CGG | - | Chr5:70149324-70149343 | None:intergenic | 30.0% |
| !! | GAAATTTTACCGGTTAAAAG+AGG | - | Chr5:70148735-70148754 | None:intergenic | 30.0% |
| !!! | TTGATGGATTTTGTTCAAGT+AGG | + | Chr5:70149078-70149097 | MsG0580027875.01.T01:CDS | 30.0% |
| AAACAAGTTCGCGTACATTT+GGG | + | Chr5:70149148-70149167 | MsG0580027875.01.T01:CDS | 35.0% | |
| CTTGACGAGAATTACTCTTT+AGG | + | Chr5:70148960-70148979 | MsG0580027875.01.T01:CDS | 35.0% | |
| TACAACGCTAATGGTGATAA+TGG | + | Chr5:70149470-70149489 | MsG0580027875.01.T01:CDS | 35.0% | |
| TCCGTAAACATCATTTGGTA+TGG | + | Chr5:70148753-70148772 | MsG0580027875.01.T01:CDS | 35.0% | |
| TTTGTGGACCATAAATTGGT+TGG | - | Chr5:70149223-70149242 | None:intergenic | 35.0% | |
| ! | CCTTTTCACCAACCAATTTA+TGG | + | Chr5:70149212-70149231 | MsG0580027875.01.T01:CDS | 35.0% |
| ! | GTAACCAATCCTTTTGGTAA+TGG | + | Chr5:70149323-70149342 | MsG0580027875.01.T01:CDS | 35.0% |
| ! | GTAGAACAAACTGAGGTTTT+AGG | - | Chr5:70149527-70149546 | None:intergenic | 35.0% |
| ! | GTTATGATTGCTCTTTGAGA+TGG | - | Chr5:70148789-70148808 | None:intergenic | 35.0% |
| !! | AATTCTGAAACTCAATGTGC+TGG | + | Chr5:70149176-70149195 | MsG0580027875.01.T01:CDS | 35.0% |
| !! | CCATAAATTGGTTGGTGAAA+AGG | - | Chr5:70149215-70149234 | None:intergenic | 35.0% |
| !!! | AATGTTGCTAGTCTTTTAGC+TGG | + | Chr5:70149296-70149315 | MsG0580027875.01.T01:CDS | 35.0% |
| !!! | ACTTGTTTTGTCCACCAAAA+GGG | - | Chr5:70149441-70149460 | None:intergenic | 35.0% |
| !!! | GATGTGGTTGTTGGTTTTTT+GGG | - | Chr5:70148837-70148856 | None:intergenic | 35.0% |
| !!! | TGATGTGGTTGTTGGTTTTT+TGG | - | Chr5:70148838-70148857 | None:intergenic | 35.0% |
| !!! | TTTTTTGGGAGAAGAAAGTG+AGG | - | Chr5:70148823-70148842 | None:intergenic | 35.0% |
| AATAACGATGTGGGTCTTGA+TGG | + | Chr5:70149263-70149282 | MsG0580027875.01.T01:CDS | 40.0% | |
| AGCTCCTTTAGCATAAACAC+CGG | - | Chr5:70149399-70149418 | None:intergenic | 40.0% | |
| ATCGTTAAACTCGCGTCAAA+AGG | + | Chr5:70149005-70149024 | MsG0580027875.01.T01:CDS | 40.0% | |
| GAAACAAGTTCGCGTACATT+TGG | + | Chr5:70149147-70149166 | MsG0580027875.01.T01:CDS | 40.0% | |
| GCACTTTGTGGACCATAAAT+TGG | - | Chr5:70149227-70149246 | None:intergenic | 40.0% | |
| GTTGCACCAAATAACGATGT+GGG | + | Chr5:70149254-70149273 | MsG0580027875.01.T01:CDS | 40.0% | |
| TACCAACGTAGAACAAACTG+AGG | - | Chr5:70149534-70149553 | None:intergenic | 40.0% | |
| TATGCTAAAGGAGCTTATCC+TGG | + | Chr5:70149404-70149423 | MsG0580027875.01.T01:CDS | 40.0% | |
| TCAAGACCCACATCGTTATT+TGG | - | Chr5:70149263-70149282 | None:intergenic | 40.0% | |
| TGCACCATAAGAAGAACCAT+GGG | - | Chr5:70149111-70149130 | None:intergenic | 40.0% | |
| TTGACGCGAGTTTAACGATT+TGG | - | Chr5:70149004-70149023 | None:intergenic | 40.0% | |
| ! | AACCTCAGTTTGTTCTACGT+TGG | + | Chr5:70149529-70149548 | MsG0580027875.01.T01:CDS | 40.0% |
| ! | GGATTTTGTTCAAGTAGGTG+TGG | + | Chr5:70149083-70149102 | MsG0580027875.01.T01:CDS | 40.0% |
| ! | TGTACCGGTGTTTATGCTAA+AGG | + | Chr5:70149392-70149411 | MsG0580027875.01.T01:CDS | 40.0% |
| !! | ACGCTAATGGTGATAATGGA+AGG | + | Chr5:70149474-70149493 | MsG0580027875.01.T01:CDS | 40.0% |
| !! | CTTTTGGTGGACAAAACAAG+TGG | + | Chr5:70149440-70149459 | MsG0580027875.01.T01:CDS | 40.0% |
| !! | TCGTTATTTGGTGCAACCAA+TGG | - | Chr5:70149251-70149270 | None:intergenic | 40.0% |
| !!! | CACTTGTTTTGTCCACCAAA+AGG | - | Chr5:70149442-70149461 | None:intergenic | 40.0% |
| !!! | GTTTTAGGATCAACAATCGC+AGG | - | Chr5:70149512-70149531 | None:intergenic | 40.0% |
| AAGTTCGCGTACATTTGGGT+TGG | + | Chr5:70149152-70149171 | MsG0580027875.01.T01:CDS | 45.0% | |
| AGCTTATCCTGGTTATGCTG+GGG | + | Chr5:70149415-70149434 | MsG0580027875.01.T01:CDS | 45.0% | |
| AGGACCAAAAGAAGCTCCTT+TGG | + | Chr5:70149355-70149374 | MsG0580027875.01.T01:CDS | 45.0% | |
| CTAACACATCAGCTGCTGTT+AGG | - | Chr5:70149058-70149077 | None:intergenic | 45.0% | |
| GAGCTTATCCTGGTTATGCT+GGG | + | Chr5:70149414-70149433 | MsG0580027875.01.T01:CDS | 45.0% | |
| GATGGTTGTGATGTGGTTGT+TGG | - | Chr5:70148846-70148865 | None:intergenic | 45.0% | |
| GCAGCTGATGTGTTAGTTGA+TGG | + | Chr5:70149062-70149081 | MsG0580027875.01.T01:CDS | 45.0% | |
| GGAACCCATGGTTCTTCTTA+TGG | + | Chr5:70149104-70149123 | MsG0580027875.01.T01:CDS | 45.0% | |
| GGTTGCACCAAATAACGATG+TGG | + | Chr5:70149253-70149272 | MsG0580027875.01.T01:CDS | 45.0% | |
| GTGCACCATAAGAAGAACCA+TGG | - | Chr5:70149112-70149131 | None:intergenic | 45.0% | |
| TCTTATGGTGCACGCGTAAA+TGG | + | Chr5:70149119-70149138 | MsG0580027875.01.T01:CDS | 45.0% | |
| TGCTGTTAGGACAACGTTGA+TGG | - | Chr5:70149045-70149064 | None:intergenic | 45.0% | |
| ! | CACAAAGGCCCTCTTTTAAC+CGG | + | Chr5:70148723-70148742 | MsG0580027875.01.T01:CDS | 45.0% |
| ! | GCTTCCAAAGGAGCTTCTTT+TGG | - | Chr5:70149362-70149381 | None:intergenic | 45.0% |
| ! | GGAACCGTAACCAATCCTTT+TGG | + | Chr5:70149317-70149336 | MsG0580027875.01.T01:CDS | 45.0% |
| CGATGTGGGTCTTGATGGAA+TGG | + | Chr5:70149268-70149287 | MsG0580027875.01.T01:CDS | 50.0% | |
| CGGTTAAAAGAGGGCCTTTG+TGG | - | Chr5:70148725-70148744 | None:intergenic | 50.0% | |
| GCAACCAATGGTGCACTTTG+TGG | - | Chr5:70149239-70149258 | None:intergenic | 50.0% | |
| GGAGCTTATCCTGGTTATGC+TGG | + | Chr5:70149413-70149432 | MsG0580027875.01.T01:CDS | 50.0% | |
| GGCAACTGATGGTTGTGATG+TGG | - | Chr5:70148853-70148872 | None:intergenic | 50.0% | |
| GGTGCTAGCTACAACGCTAA+TGG | + | Chr5:70149461-70149480 | MsG0580027875.01.T01:CDS | 50.0% | |
| TCAAGTAGGTGTGGAACCCA+TGG | + | Chr5:70149092-70149111 | MsG0580027875.01.T01:CDS | 50.0% | |
| TGGTCCACAAAGTGCACCAT+TGG | + | Chr5:70149232-70149251 | MsG0580027875.01.T01:CDS | 50.0% | |
| ! | AGCTCCTTTGGAAGCTGCTT+CGG | + | Chr5:70149367-70149386 | MsG0580027875.01.T01:CDS | 50.0% |
| ! | GTTAACCTAGCTCTCTCGCT+AGG | + | Chr5:70148927-70148946 | MsG0580027875.01.T01:CDS | 50.0% |
| ! | TTCGGTTGATTTCCACCACG+TGG | - | Chr5:70148874-70148893 | None:intergenic | 50.0% |
| AAAAGGGCCCCAGCATAACC+AGG | - | Chr5:70149425-70149444 | None:intergenic | 55.0% | |
| AACCATCAGTTGCCACGTGG+TGG | + | Chr5:70148859-70148878 | MsG0580027875.01.T01:CDS | 55.0% | |
| CAAGCCGAAGCAGCTTCCAA+AGG | - | Chr5:70149374-70149393 | None:intergenic | 55.0% | |
| CACAACCATCAGTTGCCACG+TGG | + | Chr5:70148856-70148875 | MsG0580027875.01.T01:CDS | 55.0% | |
| GAGTACCTAGCGAGAGAGCT+AGG | - | Chr5:70148935-70148954 | None:intergenic | 55.0% | |
| TTCCACCACGTGGCAACTGA+TGG | - | Chr5:70148864-70148883 | None:intergenic | 55.0% | |
| ! | AATGTGCTGGTCAATGCGCG+TGG | + | Chr5:70149189-70149208 | MsG0580027875.01.T01:CDS | 55.0% |
| ! | GAAGCTGCTTCGGCTTGTAC+CGG | + | Chr5:70149377-70149396 | MsG0580027875.01.T01:CDS | 55.0% |
| ! | TGGTTATGCTGGGGCCCTTT+TGG | + | Chr5:70149424-70149443 | MsG0580027875.01.T01:CDS | 55.0% |
| ! | TTATGCTGGGGCCCTTTTGG+TGG | + | Chr5:70149427-70149446 | MsG0580027875.01.T01:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr5 | gene | 70148609 | 70149556 | 70148609 | ID=MsG0580027875.01;Name=MsG0580027875.01 |
| Chr5 | mRNA | 70148609 | 70149556 | 70148609 | ID=MsG0580027875.01.T01;Parent=MsG0580027875.01;Name=MsG0580027875.01.T01;_AED=0.50;_eAED=0.50;_QI=0|-1|0|1|-1|1|1|0|315 |
| Chr5 | exon | 70148609 | 70149556 | 70148609 | ID=MsG0580027875.01.T01:exon:25520;Parent=MsG0580027875.01.T01 |
| Chr5 | CDS | 70148609 | 70149556 | 70148609 | ID=MsG0580027875.01.T01:cds;Parent=MsG0580027875.01.T01 |
| Gene Sequence |
| Protein sequence |
