AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580028034.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580028034.01.T01 MTR_5g069800 94.059 606 34 1 1 606 1 604 0.0 1180
MsG0580028034.01.T01 MTR_5g069740 89.934 606 47 2 1 606 1 592 0.0 1124
MsG0580028034.01.T01 MTR_3g462820 74.794 607 149 3 1 607 18 620 0.0 949
MsG0580028034.01.T01 MTR_6g028090 55.464 604 254 6 5 603 28 621 0.0 686
MsG0580028034.01.T01 MTR_6g028100 55.721 603 252 6 5 602 28 620 0.0 677
MsG0580028034.01.T01 MTR_6g028110 55.224 603 255 6 5 602 29 621 0.0 676
MsG0580028034.01.T01 MTR_6g028110 55.224 603 255 6 5 602 29 621 0.0 674
MsG0580028034.01.T01 MTR_3g079750 54.651 602 266 5 5 605 28 623 0.0 672
MsG0580028034.01.T01 MTR_2g030000 54.758 599 264 5 5 602 30 622 0.0 664
MsG0580028034.01.T01 MTR_6g028120 54.063 603 262 6 5 602 9 601 0.0 661
MsG0580028034.01.T01 MTR_7g086030 53.333 600 273 5 5 603 4 597 0.0 655
MsG0580028034.01.T01 MTR_7g086030 53.422 599 272 5 5 602 29 621 0.0 654
MsG0580028034.01.T01 MTR_7g086010 50.661 454 211 3 5 449 29 478 1.63e-162 473
MsG0580028034.01.T01 MTR_5g062650 26.021 661 364 27 5 606 50 644 4.74e-38 150
MsG0580028034.01.T01 MTR_5g062370 25.994 654 370 28 5 606 50 641 1.07e-36 146
MsG0580028034.01.T01 MTR_5g062320 25.076 654 376 26 5 606 48 639 3.36e-36 145
MsG0580028034.01.T01 MTR_5g062430 25.727 653 373 26 5 606 50 641 6.76e-36 144
MsG0580028034.01.T01 MTR_3g074060 25.915 656 364 25 5 604 44 633 1.18e-35 143
MsG0580028034.01.T01 MTR_7g109390 25.958 574 331 26 93 606 86 625 2.18e-32 133
MsG0580028034.01.T01 MTR_4g094285 26.741 632 348 29 5 594 54 612 3.54e-32 132
MsG0580028034.01.T01 MTR_5g069850 85.000 60 9 0 531 590 1 60 1.66e-31 116
MsG0580028034.01.T01 MTR_5g062370 25.796 597 346 26 5 565 50 585 4.26e-30 125
MsG0580028034.01.T01 MTR_1g087240 25.521 576 332 25 93 606 81 621 6.61e-30 125
MsG0580028034.01.T01 MTR_2g008240 27.007 548 338 25 85 594 90 613 6.69e-28 119
MsG0580028034.01.T01 MTR_1g106860 25.340 588 349 29 85 610 73 632 7.32e-27 116
MsG0580028034.01.T01 MTR_2g034720 25.132 569 355 23 86 605 77 623 6.29e-26 113
MsG0580028034.01.T01 MTR_5g030860 24.564 631 334 28 5 575 42 590 5.84e-25 110
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580028034.01.T01 AT3G47000 69.167 600 179 4 4 602 9 603 0.0 869
MsG0580028034.01.T01 AT3G47010 66.833 603 194 4 4 605 10 607 0.0 849
MsG0580028034.01.T01 AT3G47040 66.887 604 194 4 4 606 9 607 0.0 848
MsG0580028034.01.T01 AT3G47010 66.667 603 194 5 4 605 10 606 0.0 844
MsG0580028034.01.T01 AT3G47040 64.434 627 196 4 4 606 9 632 0.0 840
MsG0580028034.01.T01 AT3G47050 67.993 603 179 6 4 602 9 601 0.0 834
MsG0580028034.01.T01 AT3G47040 62.205 635 205 6 4 606 9 640 0.0 803
MsG0580028034.01.T01 AT5G04885 54.500 600 265 6 4 602 46 638 0.0 672
MsG0580028034.01.T01 AT5G04885 54.500 600 265 6 4 602 29 621 0.0 672
MsG0580028034.01.T01 AT5G04885 54.500 600 265 6 4 602 29 621 0.0 672
MsG0580028034.01.T01 AT3G47000 70.495 444 128 2 4 447 9 449 0.0 667
MsG0580028034.01.T01 AT3G47010 67.568 444 141 2 4 447 10 450 0.0 642
MsG0580028034.01.T01 AT3G47000 69.860 428 126 2 176 602 1 426 0.0 640
MsG0580028034.01.T01 AT3G47040 67.342 444 142 2 4 447 9 449 0.0 640
MsG0580028034.01.T01 AT5G20950 52.588 599 276 6 5 602 104 695 0.0 628
MsG0580028034.01.T01 AT5G20950 52.588 599 276 6 5 602 26 617 0.0 628
MsG0580028034.01.T01 AT5G20950 52.588 599 276 6 5 602 26 617 0.0 628
MsG0580028034.01.T01 AT3G47010 66.589 431 140 3 176 605 1 428 0.0 619
MsG0580028034.01.T01 AT5G20940 51.410 603 281 7 2 602 29 621 0.0 601
MsG0580028034.01.T01 AT3G47050 67.282 379 115 3 4 379 9 381 0.0 534
MsG0580028034.01.T01 AT3G62710 46.434 631 285 15 5 602 38 648 1.28e-180 526
MsG0580028034.01.T01 AT1G02640 26.897 580 330 25 86 604 80 626 2.68e-31 130
MsG0580028034.01.T01 AT5G64570 25.738 610 343 25 5 575 59 597 3.14e-29 124
MsG0580028034.01.T01 AT5G49360 24.723 631 379 25 12 604 56 628 9.01e-29 122
MsG0580028034.01.T01 AT3G19620 24.316 658 374 31 5 606 41 630 1.17e-28 122
MsG0580028034.01.T01 AT5G09730 24.277 622 365 21 5 589 49 601 1.26e-27 119
MsG0580028034.01.T01 AT1G78060 26.168 535 325 24 86 575 74 583 7.46e-26 113
MsG0580028034.01.T01 AT5G10560 24.881 631 343 28 5 575 42 601 2.05e-25 112
MsG0580028034.01.T01 AT5G64570 25.000 620 355 25 5 585 59 607 2.74e-25 111

Find 146 sgRNAs with CRISPR-Local

Find 262 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCCTTATTCCCTCTTGGTTA+TGG 0.150094 5:+73505320 MsG0580028034.01.T01:CDS
GACATGACTTCTTATGTTTC+AGG 0.158804 5:+73502366 MsG0580028034.01.T01:CDS
TTCTTAGCAGTTGCACTATT+TGG 0.179068 5:-73501689 None:intergenic
GAACTTGTAATCCCATTTAA+TGG 0.213541 5:+73505038 MsG0580028034.01.T01:CDS
CCTTATTCCCTCTTGGTTAT+GGG 0.218882 5:+73505321 MsG0580028034.01.T01:CDS
ACAATTCCAGCTCCATTAAA+TGG 0.228949 5:-73505050 None:intergenic
ATGAATTGTTCATATCTTAA+AGG 0.230899 5:-73503311 None:intergenic
TCATTACGTTCTATGAATTC+TGG 0.242355 5:-73504951 None:intergenic
CCCATAACCAAGAGGGAATA+AGG 0.250774 5:-73505321 None:intergenic
AATTTCAGGCACAACTATAT+TGG 0.253170 5:+73504869 MsG0580028034.01.T01:intron
AGCAAAGATCTGTCAGTTAA+AGG 0.273779 5:-73503443 None:intergenic
TAGTAACAGAACGTTCAATT+TGG 0.293059 5:-73501511 None:intergenic
ACCAATGGTGAAATCTTTAA+TGG 0.307869 5:-73501543 None:intergenic
GCATCAGTACAATAAATTAT+TGG 0.314084 5:-73501785 None:intergenic
TTTAAGATATGAACAATTCA+TGG 0.320591 5:+73503313 MsG0580028034.01.T01:CDS
ACAAGCTGTTTCAACCATTA+TGG 0.332210 5:+73502694 MsG0580028034.01.T01:CDS
GGAGATGGAGGTACAGAAAA+AGG 0.336684 5:+73502593 MsG0580028034.01.T01:CDS
TTTAACTGACAGATCTTTGC+TGG 0.339407 5:+73503445 MsG0580028034.01.T01:CDS
ACACTTGTGATTCTAATATC+TGG 0.340592 5:+73505098 MsG0580028034.01.T01:CDS
GATGAATTATGTCAACCTTA+TGG 0.341677 5:+73503145 MsG0580028034.01.T01:CDS
GGATGGACATTTACTAAGTA+TGG 0.343875 5:+73504599 MsG0580028034.01.T01:CDS
CATGTCAATTCCAGCATTAA+TGG 0.351444 5:-73503197 None:intergenic
AGTCATGTCTTGGACAATTT+CGG 0.358561 5:-73502352 None:intergenic
CACGGTAACAATAACGTCTA+TGG 0.361228 5:+73501812 MsG0580028034.01.T01:CDS
GTCATCTGATTGGGCTGATA+TGG 0.362204 5:+73501718 MsG0580028034.01.T01:CDS
GGAACTCATGCTGATGATAT+CGG 0.371576 5:+73504563 MsG0580028034.01.T01:CDS
GCCTACCTCCCAGCCACAAA+TGG 0.372066 5:-73502429 None:intergenic
CTCTTGGCGTTCTTATTCAA+TGG 0.379608 5:-73504527 None:intergenic
AGGGGCTACCCATTTGTGGC+TGG 0.380723 5:+73502420 MsG0580028034.01.T01:CDS
AGGTCTGCAAAGATCCTAGA+TGG 0.390671 5:+73502298 MsG0580028034.01.T01:intron
TCTAATATCTGGAAGACCTT+TGG 0.393745 5:+73505109 MsG0580028034.01.T01:CDS
CCATAACCAAGAGGGAATAA+GGG 0.403111 5:-73505320 None:intergenic
GCCAAGAGAATCCTTGTTGC+TGG 0.408515 5:+73504542 MsG0580028034.01.T01:CDS
ATCTGGAAGACCTTTGGTCT+TGG 0.409437 5:+73505115 MsG0580028034.01.T01:CDS
GGGGCTACCCATTTGTGGCT+GGG 0.413579 5:+73502421 MsG0580028034.01.T01:CDS
CTTGTTGCGGCATGGTTGCC+TGG 0.414148 5:+73505167 MsG0580028034.01.T01:CDS
TTAGCAGTTGCACTATTTGG+TGG 0.417251 5:-73501686 None:intergenic
GAAAGAAAAGCTAGGCTTCA+AGG 0.425811 5:+73502781 MsG0580028034.01.T01:CDS
GGAATCACAGATGTTATCTT+CGG 0.427323 5:+73505203 MsG0580028034.01.T01:CDS
GCATCATCAATCCTGGCTAT+TGG 0.427539 5:-73503371 None:intergenic
CATGAATTCACTCCTTCAAC+AGG 0.428141 5:-73505290 None:intergenic
GCCATTAAAGATTTCACCAT+TGG 0.428169 5:+73501542 MsG0580028034.01.T01:CDS
CTTCGGGGATCATGACTTCA+AGG 0.430718 5:+73505220 MsG0580028034.01.T01:CDS
AGAAGGAAGTGTCATCTGAT+TGG 0.432915 5:+73501708 MsG0580028034.01.T01:CDS
CGAGCTTCAACCGTTTCAGC+AGG 0.434983 5:-73501434 None:intergenic
GTTCTATGAATTCTGGTGTT+GGG 0.439975 5:-73504944 None:intergenic
GTAATCCCATTTAATGGAGC+TGG 0.440659 5:+73505044 MsG0580028034.01.T01:CDS
AGTAACAGAACGTTCAATTT+GGG 0.442472 5:-73501510 None:intergenic
GAATCACAGATGTTATCTTC+GGG 0.443316 5:+73505204 MsG0580028034.01.T01:CDS
GATGACCCCTTATTCCCTCT+TGG 0.445616 5:+73505314 MsG0580028034.01.T01:CDS
CAATTCCAGCTCCATTAAAT+GGG 0.449727 5:-73505049 None:intergenic
ATGACTTTGAAAGAGAAGAT+TGG 0.449827 5:+73501479 MsG0580028034.01.T01:CDS
TCATAGCATCTTCCCCATCT+AGG 0.450563 5:-73502312 None:intergenic
TATTGTACTGATGCTATTCA+CGG 0.453578 5:+73501794 MsG0580028034.01.T01:CDS
AACTATATTGGATGCTGCTA+AGG 0.453736 5:+73504881 MsG0580028034.01.T01:CDS
TTTCCTCACAACGTTGGCCT+CGG 0.456574 5:+73501845 MsG0580028034.01.T01:CDS
GAAGGAAGTGTCATCTGATT+GGG 0.460679 5:+73501709 MsG0580028034.01.T01:CDS
CAGCTTGATCAACCTGTTGA+AGG 0.461725 5:+73505278 MsG0580028034.01.T01:CDS
AATGGAATGAAAGGTTTACT+AGG 0.464263 5:-73504509 None:intergenic
AAATAGTGCAACTGCTAAGA+AGG 0.470452 5:+73501691 MsG0580028034.01.T01:CDS
TCAAAGTCATAAGAGAAAGA+AGG 0.472645 5:-73501466 None:intergenic
TGCTAAGGATGCTGTGGGAC+AGG 0.475726 5:+73504896 MsG0580028034.01.T01:CDS
TGAAGCAGTTCGAAAGTCCT+TGG 0.476629 5:+73504463 MsG0580028034.01.T01:CDS
GATATTAGAATCACAAGTGT+TGG 0.476636 5:-73505095 None:intergenic
GTTGACATCTCTAGTTCAAT+CGG 0.480782 5:+73503340 MsG0580028034.01.T01:CDS
TTCTTATTCAATGGAATGAA+AGG 0.484516 5:-73504518 None:intergenic
GAACTCATGCTGATGATATC+GGG 0.485480 5:+73504564 MsG0580028034.01.T01:CDS
TCCAAGGGGCTACCCATTTG+TGG 0.486656 5:+73502416 MsG0580028034.01.T01:CDS
TCTAGTGGCCAGATCACAAT+TGG 0.486949 5:+73504623 MsG0580028034.01.T01:CDS
GTCTCATATTCCAGCTGGAA+TGG 0.487762 5:+73502716 MsG0580028034.01.T01:CDS
TCACCTCCACACTCAGCATA+GGG 0.490280 5:-73505008 None:intergenic
CGTTCTATGAATTCTGGTGT+TGG 0.490481 5:-73504945 None:intergenic
TTGACATCTCTAGTTCAATC+GGG 0.490633 5:+73503341 MsG0580028034.01.T01:CDS
ATATTAGAATCACAAGTGTT+GGG 0.490789 5:-73505094 None:intergenic
ACTCTTCTAAACCAAGTCAT+TGG 0.496062 5:-73505251 None:intergenic
GCCACAAATGGGTAGCCCCT+TGG 0.496947 5:-73502417 None:intergenic
TCCAGCAACAAGGATTCTCT+TGG 0.497425 5:-73504543 None:intergenic
ATTCCATTTCCTTCACTACC+AGG 0.500207 5:-73505185 None:intergenic
GATCCACATGGCCCCGTATG+TGG 0.501410 5:+73502661 MsG0580028034.01.T01:CDS
AAGGCTAACCAATTGTGATC+TGG 0.501758 5:-73504631 None:intergenic
GATTGGGCTGATATGGTTGA+CGG 0.503500 5:+73501725 MsG0580028034.01.T01:CDS
AAACATAAGAAGTCATGTCT+TGG 0.503886 5:-73502362 None:intergenic
CTCAACGGCATCATCAATCC+TGG 0.505700 5:-73503378 None:intergenic
TTATGGTCTCATATTCCAGC+TGG 0.513411 5:+73502711 MsG0580028034.01.T01:CDS
ATATCTACTTCCATTAATGC+TGG 0.513950 5:+73503187 MsG0580028034.01.T01:CDS
TAACGATAATCTGAACCATA+AGG 0.514827 5:-73503160 None:intergenic
CTGGCGCTTGAATCACGGTT+AGG 0.517230 5:+73501758 MsG0580028034.01.T01:CDS
AGATCTTTGCTGGATACTGT+TGG 0.518240 5:+73503455 MsG0580028034.01.T01:CDS
CCTACCTCCCAGCCACAAAT+GGG 0.519639 5:-73502428 None:intergenic
GCTGGATACTGTTGGTTGCA+AGG 0.519750 5:+73503463 MsG0580028034.01.T01:CDS
GAGTTTGACTCCATTCCAGC+TGG 0.521515 5:-73502726 None:intergenic
TCACTTGAACTTAGAGCAAG+TGG 0.523247 5:+73502127 MsG0580028034.01.T01:CDS
TTTGTGATTTCTGACTGGGA+GGG 0.536472 5:+73503118 MsG0580028034.01.T01:CDS
AGGGTAAACTACCAATGACT+TGG 0.544683 5:+73505240 MsG0580028034.01.T01:CDS
GTTCTATACAATCCACATAC+GGG 0.546133 5:-73502673 None:intergenic
GCTGGAATATGAGACCATAA+TGG 0.546993 5:-73502708 None:intergenic
AACCTCCAGAAAATCATCCA+AGG 0.549496 5:+73502400 MsG0580028034.01.T01:CDS
TGTTCTATACAATCCACATA+CGG 0.551403 5:-73502674 None:intergenic
TCTTATGTTTCAGGTTTGCA+AGG 0.552090 5:+73502375 MsG0580028034.01.T01:CDS
GTGAAATCTTTAATGGCAGA+AGG 0.554246 5:-73501536 None:intergenic
TCGGGTATCAATGTGGAGGA+TGG 0.556709 5:+73504582 MsG0580028034.01.T01:CDS
CATTAATGCTGGAATTGACA+TGG 0.559007 5:+73503198 MsG0580028034.01.T01:CDS
GGATGCTGCTAAGGATGCTG+TGG 0.564728 5:+73504890 MsG0580028034.01.T01:CDS
GTATATGAATCCTGCTGAAA+CGG 0.566527 5:+73501424 MsG0580028034.01.T01:CDS
TTGCCTGGTAGTGAAGGAAA+TGG 0.568579 5:+73505182 MsG0580028034.01.T01:CDS
TCCAACAAAATGTCTAGCAC+AGG 0.571832 5:-73502573 None:intergenic
TAGAAGCTCTTGTTGCGGCA+TGG 0.572751 5:+73505159 MsG0580028034.01.T01:CDS
GGCTTCACCAATAGCAACAA+TGG 0.575663 5:-73504985 None:intergenic
CAAGAACTAAGTCAGTTACA+TGG 0.580003 5:+73501394 MsG0580028034.01.T01:exon
AGAAGCTGGCGCTTGAATCA+CGG 0.580598 5:+73501753 MsG0580028034.01.T01:CDS
CACTCTTAAAATCCGCTCAA+CGG 0.581745 5:-73503393 None:intergenic
GCTACCCATTTGTGGCTGGG+AGG 0.583997 5:+73502424 MsG0580028034.01.T01:CDS
GGTCTGCAAAGATCCTAGAT+GGG 0.587399 5:+73502299 MsG0580028034.01.T01:intron
CAGCATGAGTTCCAGCAACA+AGG 0.588717 5:-73504553 None:intergenic
ACCTCCAGAAAATCATCCAA+GGG 0.588939 5:+73502401 MsG0580028034.01.T01:CDS
GTCACCTCCACACTCAGCAT+AGG 0.590732 5:-73505009 None:intergenic
GCTCCGAGGCCAACGTTGTG+AGG 0.591912 5:-73501848 None:intergenic
ACTATATTTCCTCACAACGT+TGG 0.594556 5:+73501839 MsG0580028034.01.T01:CDS
TTTACTAAGTATGGATCTAG+TGG 0.597699 5:+73504608 MsG0580028034.01.T01:CDS
ACCTCCACACTCAGCATAGG+GGG 0.603901 5:-73505006 None:intergenic
AAACTTTGTTCCAAGACCAA+AGG 0.610030 5:-73505125 None:intergenic
TGGAATGGAGTCAAACTCCA+TGG 0.613942 5:+73502731 MsG0580028034.01.T01:CDS
CATAACCAAGAGGGAATAAG+GGG 0.624050 5:-73505319 None:intergenic
ACGTTGGCCTCGGAGCAACT+AGG 0.636583 5:+73501855 MsG0580028034.01.T01:CDS
AAGCTAGCCCATAACCAAGA+GGG 0.637396 5:-73505328 None:intergenic
GCATGGTTGCCTGGTAGTGA+AGG 0.640507 5:+73505176 MsG0580028034.01.T01:CDS
AATCCACATACGGGGCCATG+TGG 0.640866 5:-73502664 None:intergenic
GGATTGATGATGCCGTTGAG+CGG 0.645720 5:+73503381 MsG0580028034.01.T01:CDS
AGATGCCTTACAGATACACT+AGG 0.649143 5:-73502169 None:intergenic
TGACATCTCTAGTTCAATCG+GGG 0.650471 5:+73503342 MsG0580028034.01.T01:CDS
TAATCAGAAATCGATGACCA+TGG 0.652717 5:-73502748 None:intergenic
CACCTCCACACTCAGCATAG+GGG 0.652884 5:-73505007 None:intergenic
TTCGGGGATCATGACTTCAA+GGG 0.656885 5:+73505221 MsG0580028034.01.T01:CDS
GTCTGCAAAGATCCTAGATG+GGG 0.658282 5:+73502300 MsG0580028034.01.T01:CDS
TTCAGCAGGATTCATATACA+CGG 0.662584 5:-73501420 None:intergenic
AGACTTAGAGCAGATCCACA+TGG 0.673162 5:+73502649 MsG0580028034.01.T01:CDS
GACATCTCTAGTTCAATCGG+GGG 0.673392 5:+73503343 MsG0580028034.01.T01:CDS
GATGCTGCTAAGGATGCTGT+GGG 0.685349 5:+73504891 MsG0580028034.01.T01:CDS
AATCACAGATGTTATCTTCG+GGG 0.692931 5:+73505205 MsG0580028034.01.T01:CDS
TAAGCTAGCCCATAACCAAG+AGG 0.693183 5:-73505329 None:intergenic
TTCTATACAATCCACATACG+GGG 0.694901 5:-73502672 None:intergenic
AAAAGTAGAAGCTCTTGTTG+CGG 0.696874 5:+73505154 MsG0580028034.01.T01:CDS
GATGATATCGGGTATCAATG+TGG 0.699497 5:+73504575 MsG0580028034.01.T01:CDS
CCTCCAGAAAATCATCCAAG+GGG 0.706643 5:+73502402 MsG0580028034.01.T01:CDS
GATATCGGGTATCAATGTGG+AGG 0.736689 5:+73504578 MsG0580028034.01.T01:CDS
ACACAAACCTAGTTGCTCCG+AGG 0.747671 5:-73501862 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAGTATTGATTTTTTTAAAA+CGG - Chr5:73502481-73502500 None:intergenic 10.0%
!!! ATTGATTAATTTGATATTTT+TGG + Chr5:73504075-73504094 MsG0580028034.01.T01:intron 10.0%
!!! TTGATTAATTTGATATTTTT+GGG + Chr5:73504076-73504095 MsG0580028034.01.T01:intron 10.0%
!! AAAAATGGTTTATTAAAACT+TGG + Chr5:73504009-73504028 MsG0580028034.01.T01:intron 15.0%
!! AAAATGGTTTATTAAAACTT+GGG + Chr5:73504010-73504029 MsG0580028034.01.T01:intron 15.0%
!! AAAGATACAAACAAATAAAA+AGG - Chr5:73504653-73504672 None:intergenic 15.0%
!! AATCTATGTTAAAATACTAT+GGG - Chr5:73503239-73503258 None:intergenic 15.0%
!! TACATTAAAAAAAGTTTATG+AGG - Chr5:73503902-73503921 None:intergenic 15.0%
!!! AATTATCAAACGATTTTATA+CGG - Chr5:73503741-73503760 None:intergenic 15.0%
!!! TATAGTTTTTTTTTGTTTGA+AGG + Chr5:73504356-73504375 MsG0580028034.01.T01:intron 15.0%
!!! TCTGTTTTTAATTGTTTATA+TGG - Chr5:73504761-73504780 None:intergenic 15.0%
!!! TTTTAATTGTTTATATGGAT+AGG - Chr5:73504756-73504775 None:intergenic 15.0%
!! AAATGGTTTATTAAAACTTG+GGG + Chr5:73504011-73504030 MsG0580028034.01.T01:intron 20.0%
!! ATACATATAATTAGTACTTC+AGG + Chr5:73502537-73502556 MsG0580028034.01.T01:intron 20.0%
!! ATCATATCAAGTAACAAAAA+TGG + Chr5:73503994-73504013 MsG0580028034.01.T01:intron 20.0%
!! ATCTATGTTAAAATACTATG+GGG - Chr5:73503238-73503257 None:intergenic 20.0%
!! ATGAATTGTTCATATCTTAA+AGG - Chr5:73503314-73503333 None:intergenic 20.0%
!! CAATCTATGTTAAAATACTA+TGG - Chr5:73503240-73503259 None:intergenic 20.0%
!! TAAGAAATGAAAGTAGTATA+AGG - Chr5:73501602-73501621 None:intergenic 20.0%
!! TAATTGCATAACATTAGAAA+TGG - Chr5:73504698-73504717 None:intergenic 20.0%
!! TCAATAACAAATTCAAAAGT+TGG - Chr5:73502198-73502217 None:intergenic 20.0%
!!! AAGCTTTGATTTTTCATTAT+TGG + Chr5:73502052-73502071 MsG0580028034.01.T01:intron 20.0%
!!! ATCAAAACAATTTTCATTGA+GGG + Chr5:73504788-73504807 MsG0580028034.01.T01:intron 20.0%
!!! GTAGATATATTTTTTCTTTC+TGG + Chr5:73502803-73502822 MsG0580028034.01.T01:intron 20.0%
!!! TATTGATTTTTTTAAAACGG+TGG - Chr5:73502478-73502497 None:intergenic 20.0%
!!! TCAAATAAAGCATTTTGTTA+AGG + Chr5:73503075-73503094 MsG0580028034.01.T01:intron 20.0%
!!! TTTAAGATATGAACAATTCA+TGG + Chr5:73503313-73503332 MsG0580028034.01.T01:CDS 20.0%
! AACATTCATTCTCTTCATAT+AGG - Chr5:73502921-73502940 None:intergenic 25.0%
! ACACTTATGTTCTAACATAT+TGG + Chr5:73504412-73504431 MsG0580028034.01.T01:intron 25.0%
! ACGAAATTCATATCAAAAAC+AGG - Chr5:73504201-73504220 None:intergenic 25.0%
! ACTACTTTCATTTCTTAGTA+TGG + Chr5:73501605-73501624 MsG0580028034.01.T01:intron 25.0%
! ATATTAGAATCACAAGTGTT+GGG - Chr5:73505097-73505116 None:intergenic 25.0%
! ATTGGAAAGATGCAAATTAA+AGG - Chr5:73501917-73501936 None:intergenic 25.0%
! CAAAAAACAACACAATTTGA+TGG - Chr5:73503626-73503645 None:intergenic 25.0%
! GCATCAGTACAATAAATTAT+TGG - Chr5:73501788-73501807 None:intergenic 25.0%
! TAAGTGTAGCAATTGAAATT+TGG - Chr5:73504399-73504418 None:intergenic 25.0%
! TTCTTATTCAATGGAATGAA+AGG - Chr5:73504521-73504540 None:intergenic 25.0%
! TTGAAAAAAATATCCCACAT+TGG - Chr5:73504320-73504339 None:intergenic 25.0%
!! AAACAGGATTTTAAGCATTT+TGG - Chr5:73504185-73504204 None:intergenic 25.0%
!! AACAGGATTTTAAGCATTTT+GGG - Chr5:73504184-73504203 None:intergenic 25.0%
!! GATCAAAACAATTTTCATTG+AGG + Chr5:73504787-73504806 MsG0580028034.01.T01:intron 25.0%
!!! GATATTTTGAAAGAAAAGCT+AGG + Chr5:73502773-73502792 MsG0580028034.01.T01:CDS 25.0%
!!! TATTGCGCTTTTAAAATTTC+AGG + Chr5:73504855-73504874 MsG0580028034.01.T01:intron 25.0%
!!! TTTATTTTCGTGAATACTCA+CGG + Chr5:73504146-73504165 MsG0580028034.01.T01:intron 25.0%
AAACATAAGAAGTCATGTCT+TGG - Chr5:73502365-73502384 None:intergenic 30.0%
AAATCTAAGAGAACTAGATC+AGG + Chr5:73502942-73502961 MsG0580028034.01.T01:intron 30.0%
AATGGAATGAAAGGTTTACT+AGG - Chr5:73504512-73504531 None:intergenic 30.0%
AATTGATCCATGAGAAACTT+GGG + Chr5:73503955-73503974 MsG0580028034.01.T01:intron 30.0%
AATTTCAGGCACAACTATAT+TGG + Chr5:73504869-73504888 MsG0580028034.01.T01:intron 30.0%
ACACTTGTGATTCTAATATC+TGG + Chr5:73505098-73505117 MsG0580028034.01.T01:CDS 30.0%
ACCAATGGTGAAATCTTTAA+TGG - Chr5:73501546-73501565 None:intergenic 30.0%
ACTCTCAACTATAGCTATTA+CGG + Chr5:73503763-73503782 MsG0580028034.01.T01:intron 30.0%
ACTTGCATATGTGAATGAAT+AGG + Chr5:73502278-73502297 MsG0580028034.01.T01:intron 30.0%
AGAATACTATCAAATTTGCG+TGG - Chr5:73503789-73503808 None:intergenic 30.0%
AGTAACAGAACGTTCAATTT+GGG - Chr5:73501513-73501532 None:intergenic 30.0%
AGTTCATTAACACAAGTCAA+AGG + Chr5:73503851-73503870 MsG0580028034.01.T01:intron 30.0%
ATATATTCGTGAACATATGC+AGG + Chr5:73503280-73503299 MsG0580028034.01.T01:intron 30.0%
ATATCTACTTCCATTAATGC+TGG + Chr5:73503187-73503206 MsG0580028034.01.T01:CDS 30.0%
ATTCGACAAAAATGTATGCA+TGG - Chr5:73502509-73502528 None:intergenic 30.0%
CATCTAGTACTCACTTTAAA+TGG + Chr5:73503587-73503606 MsG0580028034.01.T01:intron 30.0%
GAACTTGTAATCCCATTTAA+TGG + Chr5:73505038-73505057 MsG0580028034.01.T01:CDS 30.0%
GATATTAGAATCACAAGTGT+TGG - Chr5:73505098-73505117 None:intergenic 30.0%
GATGAATTATGTCAACCTTA+TGG + Chr5:73503145-73503164 MsG0580028034.01.T01:CDS 30.0%
GTTCATTAACACAAGTCAAA+GGG + Chr5:73503852-73503871 MsG0580028034.01.T01:intron 30.0%
TAACGATAATCTGAACCATA+AGG - Chr5:73503163-73503182 None:intergenic 30.0%
TAGTAACAGAACGTTCAATT+TGG - Chr5:73501514-73501533 None:intergenic 30.0%
TATTCTACTCGAAACTGAAA+TGG + Chr5:73503803-73503822 MsG0580028034.01.T01:intron 30.0%
TCAAAGTCATAAGAGAAAGA+AGG - Chr5:73501469-73501488 None:intergenic 30.0%
TCATTACGTTCTATGAATTC+TGG - Chr5:73504954-73504973 None:intergenic 30.0%
TGTTCTATACAATCCACATA+CGG - Chr5:73502677-73502696 None:intergenic 30.0%
TTTACTAAGTATGGATCTAG+TGG + Chr5:73504608-73504627 MsG0580028034.01.T01:CDS 30.0%
! AAGGTCAATTTTACACTGTA+GGG + Chr5:73503094-73503113 MsG0580028034.01.T01:intron 30.0%
! ACAGAAAAAGGTGTAAATGA+GGG + Chr5:73502605-73502624 MsG0580028034.01.T01:CDS 30.0%
! AGATAGTAATAGAGTACCAA+TGG - Chr5:73501561-73501580 None:intergenic 30.0%
! ATGACTTTGAAAGAGAAGAT+TGG + Chr5:73501479-73501498 MsG0580028034.01.T01:CDS 30.0%
! ATTATTTAGCTCAAGCTTGT+CGG + Chr5:73504110-73504129 MsG0580028034.01.T01:intron 30.0%
! TAAGGTCAATTTTACACTGT+AGG + Chr5:73503093-73503112 MsG0580028034.01.T01:intron 30.0%
! TACAGAAAAAGGTGTAAATG+AGG + Chr5:73502604-73502623 MsG0580028034.01.T01:CDS 30.0%
! TATTGTACTGATGCTATTCA+CGG + Chr5:73501794-73501813 MsG0580028034.01.T01:CDS 30.0%
! TCCTTGTATTTTGCAACTAA+GGG + Chr5:73501648-73501667 MsG0580028034.01.T01:intron 30.0%
! TTCTGGAAATTGATCGTTTA+TGG + Chr5:73502820-73502839 MsG0580028034.01.T01:intron 30.0%
!! GATTTTAAGCATTTTGGGAA+TGG - Chr5:73504179-73504198 None:intergenic 30.0%
!! GCATGTTTGTATTGACTTAT+AGG + Chr5:73501954-73501973 MsG0580028034.01.T01:intron 30.0%
!! TACATTGATAGCGTTTGTAT+AGG - Chr5:73504287-73504306 None:intergenic 30.0%
!!! CATCTTTCCAATTTTAGCTA+TGG + Chr5:73501925-73501944 MsG0580028034.01.T01:intron 30.0%
!!! TCCTTGGTTTTGTTGAAAAA+CGG + Chr5:73504479-73504498 MsG0580028034.01.T01:CDS 30.0%
AAAAGTAGAAGCTCTTGTTG+CGG + Chr5:73505154-73505173 MsG0580028034.01.T01:CDS 35.0%
AAAATGCATAATCACCTGTG+AGG + Chr5:73502000-73502019 MsG0580028034.01.T01:intron 35.0%
AAACTTTGTTCCAAGACCAA+AGG - Chr5:73505128-73505147 None:intergenic 35.0%
AAAGGGAGAAAGGAAGAAAA+AGG + Chr5:73503869-73503888 MsG0580028034.01.T01:intron 35.0%
AAATAGTGCAACTGCTAAGA+AGG + Chr5:73501691-73501710 MsG0580028034.01.T01:CDS 35.0%
AAATGCATAATCACCTGTGA+GGG + Chr5:73502001-73502020 MsG0580028034.01.T01:intron 35.0%
AACTATATTGGATGCTGCTA+AGG + Chr5:73504881-73504900 MsG0580028034.01.T01:CDS 35.0%
AATCACAGATGTTATCTTCG+GGG + Chr5:73505205-73505224 MsG0580028034.01.T01:CDS 35.0%
ACAATTCCAGCTCCATTAAA+TGG - Chr5:73505053-73505072 None:intergenic 35.0%
ACTAAACCCGATAATCTCTT+CGG - Chr5:73503678-73503697 None:intergenic 35.0%
ACTATATTTCCTCACAACGT+TGG + Chr5:73501839-73501858 MsG0580028034.01.T01:CDS 35.0%
ACTCTTCTAAACCAAGTCAT+TGG - Chr5:73505254-73505273 None:intergenic 35.0%
AGCAAAGATCTGTCAGTTAA+AGG - Chr5:73503446-73503465 None:intergenic 35.0%
AGTCATGTCTTGGACAATTT+CGG - Chr5:73502355-73502374 None:intergenic 35.0%
ATTACCACCGAAGAGATTAT+CGG + Chr5:73503668-73503687 MsG0580028034.01.T01:intron 35.0%
CAAGAACTAAGTCAGTTACA+TGG + Chr5:73501394-73501413 MsG0580028034.01.T01:exon 35.0%
CAATTCCAGCTCCATTAAAT+GGG - Chr5:73505052-73505071 None:intergenic 35.0%
CAATTGATCCATGAGAAACT+TGG + Chr5:73503954-73503973 MsG0580028034.01.T01:intron 35.0%
CATGTCAATTCCAGCATTAA+TGG - Chr5:73503200-73503219 None:intergenic 35.0%
CATTAATGCTGGAATTGACA+TGG + Chr5:73503198-73503217 MsG0580028034.01.T01:CDS 35.0%
CCTTTGTCCATAGCTAAAAT+TGG - Chr5:73501935-73501954 None:intergenic 35.0%
GAATCACAGATGTTATCTTC+GGG + Chr5:73505204-73505223 MsG0580028034.01.T01:CDS 35.0%
GACATGACTTCTTATGTTTC+AGG + Chr5:73502366-73502385 MsG0580028034.01.T01:CDS 35.0%
GCCATTAAAGATTTCACCAT+TGG + Chr5:73501542-73501561 MsG0580028034.01.T01:CDS 35.0%
GGAAATTGATCGTTTATGGA+TGG + Chr5:73502824-73502843 MsG0580028034.01.T01:intron 35.0%
GGAATCACAGATGTTATCTT+CGG + Chr5:73505203-73505222 MsG0580028034.01.T01:CDS 35.0%
GGATGGACATTTACTAAGTA+TGG + Chr5:73504599-73504618 MsG0580028034.01.T01:CDS 35.0%
GTAACAGTGAACTAACGAAT+TGG - Chr5:73503706-73503725 None:intergenic 35.0%
GTATATGAATCCTGCTGAAA+CGG + Chr5:73501424-73501443 MsG0580028034.01.T01:CDS 35.0%
GTATGTGATCTATCCAATGT+GGG + Chr5:73504304-73504323 MsG0580028034.01.T01:intron 35.0%
GTGAAATCTTTAATGGCAGA+AGG - Chr5:73501539-73501558 None:intergenic 35.0%
GTTCTATACAATCCACATAC+GGG - Chr5:73502676-73502695 None:intergenic 35.0%
GTTCTATGAATTCTGGTGTT+GGG - Chr5:73504947-73504966 None:intergenic 35.0%
TAATCAGAAATCGATGACCA+TGG - Chr5:73502751-73502770 None:intergenic 35.0%
TCACAAAATCAGCACTCTAA+AGG + Chr5:73504239-73504258 MsG0580028034.01.T01:intron 35.0%
TCCCTTAGTTGCAAAATACA+AGG - Chr5:73501652-73501671 None:intergenic 35.0%
TCTAATATCTGGAAGACCTT+TGG + Chr5:73505109-73505128 MsG0580028034.01.T01:CDS 35.0%
TGTATGTGATCTATCCAATG+TGG + Chr5:73504303-73504322 MsG0580028034.01.T01:intron 35.0%
TTCAGCAGGATTCATATACA+CGG - Chr5:73501423-73501442 None:intergenic 35.0%
TTCTATACAATCCACATACG+GGG - Chr5:73502675-73502694 None:intergenic 35.0%
TTCTTAGCAGTTGCACTATT+TGG - Chr5:73501692-73501711 None:intergenic 35.0%
TTTAACTGACAGATCTTTGC+TGG + Chr5:73503445-73503464 MsG0580028034.01.T01:CDS 35.0%
! AAAATCAGCACTCTAAAGGA+TGG + Chr5:73504243-73504262 MsG0580028034.01.T01:intron 35.0%
! ACAAGCTGTTTCAACCATTA+TGG + Chr5:73502694-73502713 MsG0580028034.01.T01:CDS 35.0%
! CAGAAAAAGGTGTAAATGAG+GGG + Chr5:73502606-73502625 MsG0580028034.01.T01:CDS 35.0%
! CTCCTTGTATTTTGCAACTA+AGG + Chr5:73501647-73501666 MsG0580028034.01.T01:intron 35.0%
! GTTGACATCTCTAGTTCAAT+CGG + Chr5:73503340-73503359 MsG0580028034.01.T01:CDS 35.0%
! TCTTCGGTGGTAATTTTTCA+AGG - Chr5:73503662-73503681 None:intergenic 35.0%
! TCTTTTGCCATTGTTGCTAT+TGG + Chr5:73504978-73504997 MsG0580028034.01.T01:CDS 35.0%
! TTGACATCTCTAGTTCAATC+GGG + Chr5:73503341-73503360 MsG0580028034.01.T01:CDS 35.0%
!! ATTGATAGCGTTTGTATAGG+AGG - Chr5:73504284-73504303 None:intergenic 35.0%
!! TCCGTTTTTCAACAAAACCA+AGG - Chr5:73504483-73504502 None:intergenic 35.0%
!! TCTTATGTTTCAGGTTTGCA+AGG + Chr5:73502375-73502394 MsG0580028034.01.T01:CDS 35.0%
!!! AGTGCTGATTTTGTGATGAT+CGG - Chr5:73504235-73504254 None:intergenic 35.0%
!!! CCAATTTTAGCTATGGACAA+AGG + Chr5:73501932-73501951 MsG0580028034.01.T01:intron 35.0%
!!! GGTTTTGTTGAAAAACGGAA+AGG + Chr5:73504484-73504503 MsG0580028034.01.T01:CDS 35.0%
AACACAAGTCAAAGGGAGAA+AGG + Chr5:73503859-73503878 MsG0580028034.01.T01:intron 40.0%
AACCTCCAGAAAATCATCCA+AGG + Chr5:73502400-73502419 MsG0580028034.01.T01:CDS 40.0%
AAGGCTAACCAATTGTGATC+TGG - Chr5:73504634-73504653 None:intergenic 40.0%
AATGCATAATCACCTGTGAG+GGG + Chr5:73502002-73502021 MsG0580028034.01.T01:intron 40.0%
ACCTCCAGAAAATCATCCAA+GGG + Chr5:73502401-73502420 MsG0580028034.01.T01:CDS 40.0%
ACTTGGGAACAAGGATAACA+CGG + Chr5:73503971-73503990 MsG0580028034.01.T01:intron 40.0%
AGATCTTTGCTGGATACTGT+TGG + Chr5:73503455-73503474 MsG0580028034.01.T01:CDS 40.0%
AGATGCCTTACAGATACACT+AGG - Chr5:73502172-73502191 None:intergenic 40.0%
AGGGTAAACTACCAATGACT+TGG + Chr5:73505240-73505259 MsG0580028034.01.T01:CDS 40.0%
ATTCCATTTCCTTCACTACC+AGG - Chr5:73505188-73505207 None:intergenic 40.0%
CAAGGTAAGTGAAGTTTAGC+TGG + Chr5:73503481-73503500 MsG0580028034.01.T01:intron 40.0%
CACGGTAACAATAACGTCTA+TGG + Chr5:73501812-73501831 MsG0580028034.01.T01:CDS 40.0%
CACTCTTAAAATCCGCTCAA+CGG - Chr5:73503396-73503415 None:intergenic 40.0%
CATAACCAAGAGGGAATAAG+GGG - Chr5:73505322-73505341 None:intergenic 40.0%
CATGAATTCACTCCTTCAAC+AGG - Chr5:73505293-73505312 None:intergenic 40.0%
CCATAACCAAGAGGGAATAA+GGG - Chr5:73505323-73505342 None:intergenic 40.0%
CCTTATTCCCTCTTGGTTAT+GGG + Chr5:73505321-73505340 MsG0580028034.01.T01:CDS 40.0%
CGTTCTATGAATTCTGGTGT+TGG - Chr5:73504948-73504967 None:intergenic 40.0%
CTCTTGGCGTTCTTATTCAA+TGG - Chr5:73504530-73504549 None:intergenic 40.0%
GAAAGAAAAGCTAGGCTTCA+AGG + Chr5:73502781-73502800 MsG0580028034.01.T01:CDS 40.0%
GAACTCATGCTGATGATATC+GGG + Chr5:73504564-73504583 MsG0580028034.01.T01:CDS 40.0%
GATGATATCGGGTATCAATG+TGG + Chr5:73504575-73504594 MsG0580028034.01.T01:CDS 40.0%
GCTGGAATATGAGACCATAA+TGG - Chr5:73502711-73502730 None:intergenic 40.0%
GGAACTCATGCTGATGATAT+CGG + Chr5:73504563-73504582 MsG0580028034.01.T01:CDS 40.0%
GTAATCCCATTTAATGGAGC+TGG + Chr5:73505044-73505063 MsG0580028034.01.T01:CDS 40.0%
TAGCTCCTAGTGTATCTGTA+AGG + Chr5:73502164-73502183 MsG0580028034.01.T01:intron 40.0%
TCACTTGAACTTAGAGCAAG+TGG + Chr5:73502127-73502146 MsG0580028034.01.T01:CDS 40.0%
TCCAACAAAATGTCTAGCAC+AGG - Chr5:73502576-73502595 None:intergenic 40.0%
TTAAAACTTGGGGAGCAAGT+TGG + Chr5:73504021-73504040 MsG0580028034.01.T01:intron 40.0%
TTACCACCGAAGAGATTATC+GGG + Chr5:73503669-73503688 MsG0580028034.01.T01:intron 40.0%
TTAGCAGTTGCACTATTTGG+TGG - Chr5:73501689-73501708 None:intergenic 40.0%
TTATGGTCTCATATTCCAGC+TGG + Chr5:73502711-73502730 MsG0580028034.01.T01:CDS 40.0%
TTTGTGATTTCTGACTGGGA+GGG + Chr5:73503118-73503137 MsG0580028034.01.T01:CDS 40.0%
! AGACATTTTGTTGGAGATGG+AGG + Chr5:73502581-73502600 MsG0580028034.01.T01:CDS 40.0%
! CTGATTTTGTGATGATCGGA+TGG - Chr5:73504231-73504250 None:intergenic 40.0%
! GCTAGACATTTTGTTGGAGA+TGG + Chr5:73502578-73502597 MsG0580028034.01.T01:CDS 40.0%
! TGACATCTCTAGTTCAATCG+GGG + Chr5:73503342-73503361 MsG0580028034.01.T01:CDS 40.0%
! TTTTGTGATTTCTGACTGGG+AGG + Chr5:73503117-73503136 MsG0580028034.01.T01:CDS 40.0%
!! AGAAGGAAGTGTCATCTGAT+TGG + Chr5:73501708-73501727 MsG0580028034.01.T01:CDS 40.0%
!! AGGGTTTTGTGATTTCTGAC+TGG + Chr5:73503113-73503132 MsG0580028034.01.T01:intron 40.0%
!! GAAGGAAGTGTCATCTGATT+GGG + Chr5:73501709-73501728 MsG0580028034.01.T01:CDS 40.0%
!! GGGTTTTGTGATTTCTGACT+GGG + Chr5:73503114-73503133 MsG0580028034.01.T01:intron 40.0%
!! TTGGATGATTTTCTGGAGGT+TGG - Chr5:73502401-73502420 None:intergenic 40.0%
AAACCCGATAATCTCTTCGG+TGG - Chr5:73503675-73503694 None:intergenic 45.0%
AAGCTAGCCCATAACCAAGA+GGG - Chr5:73505331-73505350 None:intergenic 45.0%
AGACTTAGAGCAGATCCACA+TGG + Chr5:73502649-73502668 MsG0580028034.01.T01:CDS 45.0%
AGGTCTGCAAAGATCCTAGA+TGG + Chr5:73502298-73502317 MsG0580028034.01.T01:intron 45.0%
ATAGGAGGAGAGGAGTCTTA+AGG - Chr5:73504269-73504288 None:intergenic 45.0%
ATCTGGAAGACCTTTGGTCT+TGG + Chr5:73505115-73505134 MsG0580028034.01.T01:CDS 45.0%
CAGCTTGATCAACCTGTTGA+AGG + Chr5:73505278-73505297 MsG0580028034.01.T01:CDS 45.0%
CCATGAGAAACTTGGGAACA+AGG + Chr5:73503962-73503981 MsG0580028034.01.T01:intron 45.0%
CCCATAACCAAGAGGGAATA+AGG - Chr5:73505324-73505343 None:intergenic 45.0%
CCCTTATTCCCTCTTGGTTA+TGG + Chr5:73505320-73505339 MsG0580028034.01.T01:CDS 45.0%
CCTCCAGAAAATCATCCAAG+GGG + Chr5:73502402-73502421 MsG0580028034.01.T01:CDS 45.0%
CCTTGTTCCCAAGTTTCTCA+TGG - Chr5:73503965-73503984 None:intergenic 45.0%
GATATCGGGTATCAATGTGG+AGG + Chr5:73504578-73504597 MsG0580028034.01.T01:CDS 45.0%
GATTGGGCTGATATGGTTGA+CGG + Chr5:73501725-73501744 MsG0580028034.01.T01:CDS 45.0%
GCATCATCAATCCTGGCTAT+TGG - Chr5:73503374-73503393 None:intergenic 45.0%
GGCTTCACCAATAGCAACAA+TGG - Chr5:73504988-73505007 None:intergenic 45.0%
GGTCTGCAAAGATCCTAGAT+GGG + Chr5:73502299-73502318 MsG0580028034.01.T01:intron 45.0%
GTCATCTGATTGGGCTGATA+TGG + Chr5:73501718-73501737 MsG0580028034.01.T01:CDS 45.0%
GTCTCATATTCCAGCTGGAA+TGG + Chr5:73502716-73502735 MsG0580028034.01.T01:CDS 45.0%
GTCTGCAAAGATCCTAGATG+GGG + Chr5:73502300-73502319 MsG0580028034.01.T01:CDS 45.0%
TAAGCTAGCCCATAACCAAG+AGG - Chr5:73505332-73505351 None:intergenic 45.0%
TAGCGTTTGTATAGGAGGAG+AGG - Chr5:73504279-73504298 None:intergenic 45.0%
TCATAGCATCTTCCCCATCT+AGG - Chr5:73502315-73502334 None:intergenic 45.0%
TCCAGCAACAAGGATTCTCT+TGG - Chr5:73504546-73504565 None:intergenic 45.0%
TCGTGAACATATGCAGGTGA+TGG + Chr5:73503286-73503305 MsG0580028034.01.T01:intron 45.0%
TCTAGTGGCCAGATCACAAT+TGG + Chr5:73504623-73504642 MsG0580028034.01.T01:CDS 45.0%
TGAAGCAGTTCGAAAGTCCT+TGG + Chr5:73504463-73504482 MsG0580028034.01.T01:CDS 45.0%
TGGAATGGAGTCAAACTCCA+TGG + Chr5:73502731-73502750 MsG0580028034.01.T01:CDS 45.0%
TTCGGGGATCATGACTTCAA+GGG + Chr5:73505221-73505240 MsG0580028034.01.T01:CDS 45.0%
! GACATCTCTAGTTCAATCGG+GGG + Chr5:73503343-73503362 MsG0580028034.01.T01:CDS 45.0%
! GCCTGTGCTAGACATTTTGT+TGG + Chr5:73502572-73502591 MsG0580028034.01.T01:CDS 45.0%
! GGAGATGGAGGTACAGAAAA+AGG + Chr5:73502593-73502612 MsG0580028034.01.T01:CDS 45.0%
! TAGCCCCTTGGATGATTTTC+TGG - Chr5:73502408-73502427 None:intergenic 45.0%
! TTGCCTGGTAGTGAAGGAAA+TGG + Chr5:73505182-73505201 MsG0580028034.01.T01:CDS 45.0%
AAATGCACATGACCCCTCAC+AGG - Chr5:73502017-73502036 None:intergenic 50.0%
ACACAAACCTAGTTGCTCCG+AGG - Chr5:73501865-73501884 None:intergenic 50.0%
AGAAGCTGGCGCTTGAATCA+CGG + Chr5:73501753-73501772 MsG0580028034.01.T01:CDS 50.0%
CAGCATGAGTTCCAGCAACA+AGG - Chr5:73504556-73504575 None:intergenic 50.0%
CTCAACGGCATCATCAATCC+TGG - Chr5:73503381-73503400 None:intergenic 50.0%
CTTCGGGGATCATGACTTCA+AGG + Chr5:73505220-73505239 MsG0580028034.01.T01:CDS 50.0%
GAGTTTGACTCCATTCCAGC+TGG - Chr5:73502729-73502748 None:intergenic 50.0%
GATGACCCCTTATTCCCTCT+TGG + Chr5:73505314-73505333 MsG0580028034.01.T01:CDS 50.0%
GATGCTGCTAAGGATGCTGT+GGG + Chr5:73504891-73504910 MsG0580028034.01.T01:CDS 50.0%
GCCAAGAGAATCCTTGTTGC+TGG + Chr5:73504542-73504561 MsG0580028034.01.T01:CDS 50.0%
TAGAAGCTCTTGTTGCGGCA+TGG + Chr5:73505159-73505178 MsG0580028034.01.T01:CDS 50.0%
TCACCTCCACACTCAGCATA+GGG - Chr5:73505011-73505030 None:intergenic 50.0%
TCGGGTATCAATGTGGAGGA+TGG + Chr5:73504582-73504601 MsG0580028034.01.T01:CDS 50.0%
! CCCCTTGGATGATTTTCTGG+AGG - Chr5:73502405-73502424 None:intergenic 50.0%
! GCTGGATACTGTTGGTTGCA+AGG + Chr5:73503463-73503482 MsG0580028034.01.T01:CDS 50.0%
! GGTTGACGGTTTTCAGAAGC+TGG + Chr5:73501739-73501758 MsG0580028034.01.T01:CDS 50.0%
! TTTCCTCACAACGTTGGCCT+CGG + Chr5:73501845-73501864 MsG0580028034.01.T01:CDS 50.0%
!! GGATTGATGATGCCGTTGAG+CGG + Chr5:73503381-73503400 MsG0580028034.01.T01:CDS 50.0%
AATCCACATACGGGGCCATG+TGG - Chr5:73502667-73502686 None:intergenic 55.0%
ACCTCCACACTCAGCATAGG+GGG - Chr5:73505009-73505028 None:intergenic 55.0%
CACCTCCACACTCAGCATAG+GGG - Chr5:73505010-73505029 None:intergenic 55.0%
CCTACCTCCCAGCCACAAAT+GGG - Chr5:73502431-73502450 None:intergenic 55.0%
CGAGCTTCAACCGTTTCAGC+AGG - Chr5:73501437-73501456 None:intergenic 55.0%
CTGGCGCTTGAATCACGGTT+AGG + Chr5:73501758-73501777 MsG0580028034.01.T01:CDS 55.0%
GGATGCTGCTAAGGATGCTG+TGG + Chr5:73504890-73504909 MsG0580028034.01.T01:CDS 55.0%
GTCACCTCCACACTCAGCAT+AGG - Chr5:73505012-73505031 None:intergenic 55.0%
TCCAAGGGGCTACCCATTTG+TGG + Chr5:73502416-73502435 MsG0580028034.01.T01:CDS 55.0%
TGCTAAGGATGCTGTGGGAC+AGG + Chr5:73504896-73504915 MsG0580028034.01.T01:CDS 55.0%
! GCATGGTTGCCTGGTAGTGA+AGG + Chr5:73505176-73505195 MsG0580028034.01.T01:CDS 55.0%
AGGGGCTACCCATTTGTGGC+TGG + Chr5:73502420-73502439 MsG0580028034.01.T01:CDS 60.0%
CCCATTTGTGGCTGGGAGGT+AGG + Chr5:73502428-73502447 MsG0580028034.01.T01:intron 60.0%
CTTGTTGCGGCATGGTTGCC+TGG + Chr5:73505167-73505186 MsG0580028034.01.T01:CDS 60.0%
GAAGCCCCCTATGCTGAGTG+TGG + Chr5:73505002-73505021 MsG0580028034.01.T01:CDS 60.0%
GATCCACATGGCCCCGTATG+TGG + Chr5:73502661-73502680 MsG0580028034.01.T01:CDS 60.0%
GCCACAAATGGGTAGCCCCT+TGG - Chr5:73502420-73502439 None:intergenic 60.0%
GCCTACCTCCCAGCCACAAA+TGG - Chr5:73502432-73502451 None:intergenic 60.0%
GCTACCCATTTGTGGCTGGG+AGG + Chr5:73502424-73502443 MsG0580028034.01.T01:CDS 60.0%
GGGGCTACCCATTTGTGGCT+GGG + Chr5:73502421-73502440 MsG0580028034.01.T01:CDS 60.0%
TGGCTGGGAGGTAGGCAGAT+AGG + Chr5:73502436-73502455 MsG0580028034.01.T01:intron 60.0%
! ACGTTGGCCTCGGAGCAACT+AGG + Chr5:73501855-73501874 MsG0580028034.01.T01:CDS 60.0%
!! CGGGGGAAGTACCAATAGCC+AGG + Chr5:73503360-73503379 MsG0580028034.01.T01:CDS 60.0%
GCCCCCTATGCTGAGTGTGG+AGG + Chr5:73505005-73505024 MsG0580028034.01.T01:CDS 65.0%
GCTCCGAGGCCAACGTTGTG+AGG - Chr5:73501851-73501870 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr5 gene 73501353 73505389 73501353 ID=MsG0580028034.01;Name=MsG0580028034.01
Chr5 mRNA 73501353 73505389 73501353 ID=MsG0580028034.01.T01;Parent=MsG0580028034.01;Name=MsG0580028034.01.T01;_AED=0.46;_eAED=0.46;_QI=60|0.87|0.88|1|0.87|0.77|9|13|611
Chr5 exon 73501353 73501563 73501353 ID=MsG0580028034.01.T01:exon:45383;Parent=MsG0580028034.01.T01
Chr5 exon 73501669 73501882 73501669 ID=MsG0580028034.01.T01:exon:45384;Parent=MsG0580028034.01.T01
Chr5 exon 73502090 73502180 73502090 ID=MsG0580028034.01.T01:exon:45385;Parent=MsG0580028034.01.T01
Chr5 exon 73502300 73502445 73502300 ID=MsG0580028034.01.T01:exon:45386;Parent=MsG0580028034.01.T01
Chr5 exon 73502559 73502802 73502559 ID=MsG0580028034.01.T01:exon:45387;Parent=MsG0580028034.01.T01
Chr5 exon 73503115 73503219 73503115 ID=MsG0580028034.01.T01:exon:45388;Parent=MsG0580028034.01.T01
Chr5 exon 73503302 73503484 73503302 ID=MsG0580028034.01.T01:exon:45389;Parent=MsG0580028034.01.T01
Chr5 exon 73504443 73504644 73504443 ID=MsG0580028034.01.T01:exon:45390;Parent=MsG0580028034.01.T01
Chr5 exon 73504877 73505389 73504877 ID=MsG0580028034.01.T01:exon:45391;Parent=MsG0580028034.01.T01
Chr5 five_prime_UTR 73501353 73501412 73501353 ID=MsG0580028034.01.T01:five_prime_utr;Parent=MsG0580028034.01.T01
Chr5 CDS 73501413 73501563 73501413 ID=MsG0580028034.01.T01:cds;Parent=MsG0580028034.01.T01
Chr5 CDS 73501669 73501882 73501669 ID=MsG0580028034.01.T01:cds;Parent=MsG0580028034.01.T01
Chr5 CDS 73502090 73502180 73502090 ID=MsG0580028034.01.T01:cds;Parent=MsG0580028034.01.T01
Chr5 CDS 73502300 73502445 73502300 ID=MsG0580028034.01.T01:cds;Parent=MsG0580028034.01.T01
Chr5 CDS 73502559 73502802 73502559 ID=MsG0580028034.01.T01:cds;Parent=MsG0580028034.01.T01
Chr5 CDS 73503115 73503219 73503115 ID=MsG0580028034.01.T01:cds;Parent=MsG0580028034.01.T01
Chr5 CDS 73503302 73503484 73503302 ID=MsG0580028034.01.T01:cds;Parent=MsG0580028034.01.T01
Chr5 CDS 73504443 73504644 73504443 ID=MsG0580028034.01.T01:cds;Parent=MsG0580028034.01.T01
Chr5 CDS 73504877 73505376 73504877 ID=MsG0580028034.01.T01:cds;Parent=MsG0580028034.01.T01
Chr5 three_prime_UTR 73505377 73505389 73505377 ID=MsG0580028034.01.T01:three_prime_utr;Parent=MsG0580028034.01.T01
Gene Sequence

>MsG0580028034.01.T01

ATGGATTCCGTGTATATGAATCCTGCTGAAACGGTTGAAGCTCGCATCAAAAACCTTCTTTCTCTTATGACTTTGAAAGAGAAGATTGGTCAGATGACCCAAATTGAACGTTCTGTTACTACTCCTTCTGCCATTAAAGATTTCACCATTGGGAGTGTATACTGTGCTCCACCAAATAGTGCAACTGCTAAGAAGGAAGTGTCATCTGATTGGGCTGATATGGTTGACGGTTTTCAGAAGCTGGCGCTTGAATCACGGTTAGGCATACCAATAATTTATTGTACTGATGCTATTCACGGTAACAATAACGTCTATGGTACTACTATATTTCCTCACAACGTTGGCCTCGGAGCAACTAGGTTTGTAGATGCAGATTTAGTTCAAAGAATTGCAGCTGCAACATCACTTGAACTTAGAGCAAGTGGAACTCACTATACTTTAGCTCCTAGTGTATCTGTCTGCAAAGATCCTAGATGGGGAAGATGCTATGAGAGTTACAGCGAAGACACCGAAATTGTCCAAGACATGACTTCTTATGTTTCAGGTTTGCAAGGCCAACCTCCAGAAAATCATCCAAGGGGCTACCCATTTGTGGCTGGGAGGAACAAAGCTATTGCCTGTGCTAGACATTTTGTTGGAGATGGAGGTACAGAAAAAGGTGTAAATGAGGGGAATACAATATTATCATATGAAGACTTAGAGCAGATCCACATGGCCCCGTATGTGGATTGTATAGAACAAGCTGTTTCAACCATTATGGTCTCATATTCCAGCTGGAATGGAGTCAAACTCCATGGTCATCGATTTCTGATTAATGATATTTTGAAAGAAAAGCTAGGCTTCAAGGGTTTTGTGATTTCTGACTGGGAGGGAATCGATGAATTATGTCAACCTTATGGTTCAGATTATCGTTATTGCATATCTACTTCCATTAATGCTGGAATTGACATGGTGATGGTTCCTTTAAGATATGAACAATTCATGGAAGAGTTGACATCTCTAGTTCAATCGGGGGAAGTACCAATAGCCAGGATTGATGATGCCGTTGAGCGGATTTTAAGAGTGAAGTTTATTGCTGAACTTTTTGAATTTCCTTTAACTGACAGATCTTTGCTGGATACTGTTGGTTGCAAGATACATAGAGATCTAGCACGTGAAGCAGTTCGAAAGTCCTTGGTTTTGTTGAAAAACGGAAAGGAGCCTAGTAAACCTTTCATTCCATTGAATAAGAACGCCAAGAGAATCCTTGTTGCTGGAACTCATGCTGATGATATCGGGTATCAATGTGGAGGATGGACATTTACTAAGTATGGATCTAGTGGCCAGATCACAATTGGCACAACTATATTGGATGCTGCTAAGGATGCTGTGGGACAGGAAACTGAAGTTATATATGAGAAGTGCCCAACACCAGAATTCATAGAACGTAATGAATTTTCTTTTGCCATTGTTGCTATTGGTGAAGCCCCCTATGCTGAGTGTGGAGGTGACAATAAAGAACTTGTAATCCCATTTAATGGAGCTGGAATTGTCGACATAGTTGCTGATAAAATCCCAACACTTGTGATTCTAATATCTGGAAGACCTTTGGTCTTGGAACAAAGTTTGCTCGAAAAAGTAGAAGCTCTTGTTGCGGCATGGTTGCCTGGTAGTGAAGGAAATGGAATCACAGATGTTATCTTCGGGGATCATGACTTCAAGGGTAAACTACCAATGACTTGGTTTAGAAGAGTTGATCAGCTTGATCAACCTGTTGAAGGAGTGAATTCATGTGATGACCCCTTATTCCCTCTTGGTTATGGGCTAGCTTATAATAACGAGAATTCACATGAATAA
Protein sequence

>MsG0580028034.01.T01

MDSVYMNPAETVEARIKNLLSLMTLKEKIGQMTQIERSVTTPSAIKDFTIGSVYCAPPNSATAKKEVSSDWADMVDGFQKLALESRLGIPIIYCTDAIHGNNNVYGTTIFPHNVGLGATRFVDADLVQRIAAATSLELRASGTHYTLAPSVSVCKDPRWGRCYESYSEDTEIVQDMTSYVSGLQGQPPENHPRGYPFVAGRNKAIACARHFVGDGGTEKGVNEGNTILSYEDLEQIHMAPYVDCIEQAVSTIMVSYSSWNGVKLHGHRFLINDILKEKLGFKGFVISDWEGIDELCQPYGSDYRYCISTSINAGIDMVMVPLRYEQFMEELTSLVQSGEVPIARIDDAVERILRVKFIAELFEFPLTDRSLLDTVGCKIHRDLAREAVRKSLVLLKNGKEPSKPFIPLNKNAKRILVAGTHADDIGYQCGGWTFTKYGSSGQITIGTTILDAAKDAVGQETEVIYEKCPTPEFIERNEFSFAIVAIGEAPYAECGGDNKELVIPFNGAGIVDIVADKIPTLVILISGRPLVLEQSLLEKVEALVAAWLPGSEGNGITDVIFGDHDFKGKLPMTWFRRVDQLDQPVEGVNSCDDPLFPLGYGLAYNNENSHE*