AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380012782.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380012782.01.T01 MTR_3g030950 89.024 410 12 3 1 407 1 380 0.0 716
MsG0380012782.01.T01 MTR_3g030975 99.048 210 2 0 198 407 3 212 8.32e-150 423
MsG0380012782.01.T01 MTR_8g104810 90.625 64 6 0 99 162 43 106 4.98e-36 128
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380012782.01.T01 AT3G08010 61.594 414 112 5 1 407 1 374 1.38e-175 494

Find 111 sgRNAs with CRISPR-Local

Find 310 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAAATGATGCTTATATTTA+AGG 0.043632 3:-24470910 None:intergenic
CAGAACATGTTTGGAGTTTA+AGG 0.122876 3:-24465819 None:intergenic
GTTCTCCAAGACAGTTTAAA+AGG 0.168663 3:+24466486 MsG0380012782.01.T01:intron
CTGAGGATTGTATTGGCTTC+TGG 0.212413 3:+24470724 MsG0380012782.01.T01:CDS
CTAAAGAAGCGAATGTTTCT+AGG 0.224379 3:-24466150 None:intergenic
ATACTATTAATAACATTATT+AGG 0.258304 3:-24466075 None:intergenic
AATCATACTCACCCGTTTAC+TGG 0.258872 3:-24467755 None:intergenic
GAAAGATTTGGATATGGTTC+TGG 0.270200 3:+24469620 MsG0380012782.01.T01:CDS
TTAAGGGCAGAGGTAGTAAA+AGG 0.279249 3:-24470893 None:intergenic
CTAGAAACATTCGCTTCTTT+AGG 0.283849 3:+24466151 MsG0380012782.01.T01:CDS
AGACCAATTCTTGATGTTAG+AGG 0.286093 3:+24465988 MsG0380012782.01.T01:CDS
TGGGCTAGATCTTGATTTAT+TGG 0.288153 3:+24469640 MsG0380012782.01.T01:CDS
CATGGTTATGGTTATGGTTA+TGG 0.297196 3:-24465665 None:intergenic
AGTAGCCATGGTTATGGTTA+TGG 0.311414 3:-24465671 None:intergenic
GGGCTAGATCTTGATTTATT+GGG 0.315434 3:+24469641 MsG0380012782.01.T01:CDS
ATACTGTCAGGATCAGCTTC+TGG 0.321460 3:-24465937 None:intergenic
TGTTGCTATTTGTGATGAAT+TGG 0.332766 3:+24466116 MsG0380012782.01.T01:CDS
CAAATGATGCTTATATTTAA+GGG 0.347994 3:-24470909 None:intergenic
TTTCTGAAACAGAACATGTT+TGG 0.362241 3:-24465828 None:intergenic
TTTCCTCTAACATCAAGAAT+TGG 0.375878 3:-24465991 None:intergenic
GTCGCAAAAGGATTGTCTAA+TGG 0.378728 3:-24469220 None:intergenic
TCTCGTGCTAAAATATTATC+AGG 0.382198 3:+24469713 MsG0380012782.01.T01:CDS
TAAAATTGAACTTATATTCA+AGG 0.382289 3:-24470949 None:intergenic
TCAGAGGAAAGATTTGGATA+TGG 0.386627 3:+24469614 MsG0380012782.01.T01:CDS
GAAGCAGCTAAGAAAGCTTC+TGG 0.387670 3:+24470663 MsG0380012782.01.T01:CDS
AATAATTTGTACAATTATAC+AGG 0.388555 3:-24470771 None:intergenic
TAAGAGCTCTTCCCAGTAAA+CGG 0.396897 3:+24467743 MsG0380012782.01.T01:CDS
TTAGATTCTGAGGATTGTAT+TGG 0.404887 3:+24470717 MsG0380012782.01.T01:CDS
TCAGCCTCAGAGGAAAGATT+TGG 0.414247 3:+24469608 MsG0380012782.01.T01:CDS
GAAGATGCAACAGCCAATCC+TGG 0.417168 3:-24469692 None:intergenic
GGAGAGTTTGGTGGTGATGA+TGG 0.419570 3:-24465746 None:intergenic
GCTTAGAGTAGCCATGGTTA+TGG 0.422554 3:-24465677 None:intergenic
AGATAACATGTTTCAGCAGT+TGG 0.424045 3:-24465910 None:intergenic
CATTATTACAAAAGCATGTA+AGG 0.428552 3:+24467711 MsG0380012782.01.T01:CDS
TACTGTCAGGATCAGCTTCT+GGG 0.430219 3:-24465936 None:intergenic
AAAGATTTGGATATGGTTCT+GGG 0.430953 3:+24469621 MsG0380012782.01.T01:CDS
GAAACATCCTGGATTTCAAA+AGG 0.431524 3:+24469180 MsG0380012782.01.T01:CDS
CCTCAGAATCTAACTCATCT+TGG 0.433316 3:-24470707 None:intergenic
AACTAAAGAAGCTGAAGCTT+GGG 0.435084 3:+24470641 MsG0380012782.01.T01:CDS
GAGAGTTTGGTGGTGATGAT+GGG 0.439947 3:-24465745 None:intergenic
GATAACATGTTTCAGCAGTT+GGG 0.444982 3:-24465909 None:intergenic
ATGTTAGAGGAAAGAAACTT+TGG 0.447254 3:+24466001 MsG0380012782.01.T01:CDS
ATGTTTGGAGTTTAAGGAAG+TGG 0.452226 3:-24465813 None:intergenic
GCGTGCAGTGTCCGTTTCAA+TGG 0.453511 3:-24470547 None:intergenic
TACAAAAGCATGTAAGGAGC+TGG 0.453660 3:+24467717 MsG0380012782.01.T01:CDS
CTAATGACTTTACCTGAGTA+AGG 0.456324 3:-24469292 None:intergenic
ACTAAAGCTCCCGCATATGC+AGG 0.456880 3:+24466521 MsG0380012782.01.T01:CDS
TGTTAGAGGAAAGAAACTTT+GGG 0.458710 3:+24466002 MsG0380012782.01.T01:CDS
TATGGTTATGGTTATGGCTA+TGG 0.460024 3:-24465659 None:intergenic
CAACTAAAGAAGCTGAAGCT+TGG 0.463491 3:+24470640 MsG0380012782.01.T01:CDS
TTCTCCAAGACAGTTTAAAA+GGG 0.466862 3:+24466487 MsG0380012782.01.T01:intron
ATCCTGACAGTATATTAAGC+TGG 0.466941 3:+24465947 MsG0380012782.01.T01:CDS
TGGTGTCTTTAAGACATGTT+GGG 0.468495 3:+24467522 MsG0380012782.01.T01:CDS
GTCTAATGGCAAAAGAGGCT+TGG 0.468563 3:-24469206 None:intergenic
CTATGTGTGTAACTGATTTG+TGG 0.470243 3:-24465636 None:intergenic
CTAACTCATCTTGGATTGCT+AGG 0.473543 3:-24470698 None:intergenic
TTCCCGAACCCTGCATATGC+GGG 0.475049 3:-24466530 None:intergenic
ATGCGGGAGCTTTAGTGCAC+CGG 0.476226 3:-24466514 None:intergenic
AAGAGCTCTTCCCAGTAAAC+GGG 0.480174 3:+24467744 MsG0380012782.01.T01:CDS
TATGTGTGTAACTGATTTGT+GGG 0.486102 3:-24465635 None:intergenic
CTACAAAACTTAGTAACCTT+AGG 0.488762 3:-24470855 None:intergenic
TTTGGTGGTGATGATGGGGT+TGG 0.488965 3:-24465740 None:intergenic
AACAGCCAATCCTGGGATCA+AGG 0.490579 3:-24469684 None:intergenic
TCCCAGCTTAATATACTGTC+AGG 0.490831 3:-24465949 None:intergenic
GGAAAATGGGAAATTGATGA+TGG 0.491016 3:-24465779 None:intergenic
AAATCTTTCCTCTGAGGCTG+AGG 0.496486 3:-24469606 None:intergenic
GGAGCTCTGTTCCATTGAAA+CGG 0.498099 3:+24470536 MsG0380012782.01.T01:CDS
TACAATTATACAGGTGGAGG+TGG 0.500673 3:-24470762 None:intergenic
AAATTCCAACTGAAAGAGTC+AGG 0.502775 3:-24470575 None:intergenic
CAGTATATTAAGCTGGGAGT+TGG 0.503857 3:+24465954 MsG0380012782.01.T01:CDS
AGAGTTTGGTGGTGATGATG+GGG 0.504160 3:-24465744 None:intergenic
ATCATACTCACCCGTTTACT+GGG 0.505577 3:-24467754 None:intergenic
TTTGTTCAGTTACCTTACTC+AGG 0.508695 3:+24469280 MsG0380012782.01.T01:CDS
CTTCCCGAACCCTGCATATG+CGG 0.513658 3:-24466531 None:intergenic
GGGTTGGTGTAGTTGAAAGA+TGG 0.516225 3:-24465724 None:intergenic
AGCTTCAGCTTCTTTAGTTG+AGG 0.517831 3:-24470637 None:intergenic
ACTGTATACACGAAACATCC+TGG 0.520597 3:+24469169 MsG0380012782.01.T01:CDS
GGTTGGTGTAGTTGAAAGAT+GGG 0.527581 3:-24465723 None:intergenic
GAAGACCTTGATCCCAGGAT+TGG 0.531133 3:+24469679 MsG0380012782.01.T01:CDS
TTGTACAATTATACAGGTGG+AGG 0.539597 3:-24470765 None:intergenic
AAGCGAATGTTTCTAGGCAC+AGG 0.539819 3:-24466144 None:intergenic
GGATTGTCTAATGGCAAAAG+AGG 0.539986 3:-24469211 None:intergenic
TCCTGACAGTATATTAAGCT+GGG 0.544833 3:+24465948 MsG0380012782.01.T01:CDS
CCAAGATGAGTTAGATTCTG+AGG 0.545325 3:+24470707 MsG0380012782.01.T01:CDS
TATTATAGCCGTTCGAGAGG+AGG 0.550876 3:+24469583 MsG0380012782.01.T01:intron
ATGCTTATATTTAAGGGCAG+AGG 0.551354 3:-24470903 None:intergenic
AAACATCCTGGATTTCAAAA+GGG 0.557929 3:+24469181 MsG0380012782.01.T01:CDS
TGCGGGAGCTTTAGTGCACC+GGG 0.562418 3:-24466513 None:intergenic
GACGAGAAGACCTTGATCCC+AGG 0.562521 3:+24469674 MsG0380012782.01.T01:CDS
TCAGCTTCTTTAGTTGAGGT+AGG 0.564251 3:-24470633 None:intergenic
AGACATGTTGGGATTTCACA+TGG 0.564744 3:+24467533 MsG0380012782.01.T01:CDS
TATTAATAGTATCACTCTCA+AGG 0.566789 3:+24466086 MsG0380012782.01.T01:CDS
GAAAATGGGAAATTGATGAT+GGG 0.567427 3:-24465778 None:intergenic
GACAGTTTAAAAGGGCAACC+CGG 0.577465 3:+24466495 MsG0380012782.01.T01:intron
GTTGAAGCTTAGAGTAGCCA+TGG 0.581076 3:-24465683 None:intergenic
CTTTATTATAGCCGTTCGAG+AGG 0.585820 3:+24469580 MsG0380012782.01.T01:intron
AAGATGCAACAGCCAATCCT+GGG 0.585967 3:-24469691 None:intergenic
GTGGTGTCTTTAAGACATGT+TGG 0.586254 3:+24467521 MsG0380012782.01.T01:CDS
ACAAAAGCATGTAAGGAGCT+GGG 0.589228 3:+24467718 MsG0380012782.01.T01:CDS
GGCTGAGGCCTCCTCTCGAA+CGG 0.600823 3:-24469591 None:intergenic
CTAAAGCTCCCGCATATGCA+GGG 0.608148 3:+24466522 MsG0380012782.01.T01:CDS
GTTGGTGTAGTTGAAAGATG+GGG 0.608423 3:-24465722 None:intergenic
AGAGGAGGCCTCAGCCTCAG+AGG 0.611276 3:+24469598 MsG0380012782.01.T01:CDS
TTTCAGTTGGAATTTCGACT+CGG 0.613028 3:+24470583 MsG0380012782.01.T01:CDS
AATTTGTACAATTATACAGG+TGG 0.621554 3:-24470768 None:intergenic
GACATGTTGGGATTTCACAT+GGG 0.624142 3:+24467534 MsG0380012782.01.T01:CDS
TCTAACCTGACTCTTTCAGT+TGG 0.624714 3:+24470570 MsG0380012782.01.T01:CDS
CATAACCATAACCATAACCA+TGG 0.648409 3:+24465666 MsG0380012782.01.T01:exon
ATATCCAAATCTTTCCTCTG+AGG 0.661900 3:-24469612 None:intergenic
GCAGCTAAGAAAGCTTCTGG+AGG 0.687768 3:+24470666 MsG0380012782.01.T01:CDS
TGAAAAGGCATGTTCATGTG+TGG 0.719760 3:+24467502 MsG0380012782.01.T01:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATACTATTAATAACATTATT+AGG - Chr3:24466078-24466097 None:intergenic 10.0%
!!! CTAATTATTTTTATATACTT+TGG - Chr3:24466953-24466972 None:intergenic 10.0%
!!! TATAAGTTCAATTTTAAATT+TGG + Chr3:24470956-24470975 MsG0380012782.01.T01:three_prime_UTR 10.0%
!! ATATATGTTAGAGATTAAAT+TGG + Chr3:24467132-24467151 MsG0380012782.01.T01:intron 15.0%
!! TAAAATGAAAAAAGAAACAA+GGG - Chr3:24468651-24468670 None:intergenic 15.0%
!! TAAAATTGAACTTATATTCA+AGG - Chr3:24470952-24470971 None:intergenic 15.0%
!! TATAAAAAGAAAAAAAAGGT+TGG + Chr3:24468216-24468235 MsG0380012782.01.T01:intron 15.0%
!! TTAAAATGAAAAAAGAAACA+AGG - Chr3:24468652-24468671 None:intergenic 15.0%
!!! AATAATTTGTACAATTATAC+AGG - Chr3:24470774-24470793 None:intergenic 15.0%
!!! TAAAAGTCATTTTTAAAACA+AGG - Chr3:24469895-24469914 None:intergenic 15.0%
!!! TTAACAACTATTTTTTGTTT+TGG + Chr3:24468382-24468401 MsG0380012782.01.T01:intron 15.0%
!! AAAATGAAAAAAGAAACAAG+GGG - Chr3:24468650-24468669 None:intergenic 20.0%
!! AAAATGTATGATAGCATAAT+AGG - Chr3:24470016-24470035 None:intergenic 20.0%
!! AAATGTTCTTAGAAAGTAAA+TGG - Chr3:24467956-24467975 None:intergenic 20.0%
!! ACAAATTATAAACATGTCAT+AGG - Chr3:24470286-24470305 None:intergenic 20.0%
!! ACACTTTATAAACTCTATTT+AGG - Chr3:24467298-24467317 None:intergenic 20.0%
!! ACTACTTATTGTTTATGTTA+CGG + Chr3:24466190-24466209 MsG0380012782.01.T01:intron 20.0%
!! ACTATATCTTGTGTATTTAT+TGG + Chr3:24467236-24467255 MsG0380012782.01.T01:intron 20.0%
!! CAAATGATGCTTATATTTAA+GGG - Chr3:24470912-24470931 None:intergenic 20.0%
!! TAAAGTGATTAAACTGAATA+TGG - Chr3:24468190-24468209 None:intergenic 20.0%
!! TAATTAAGCACTTATGTATA+AGG - Chr3:24470396-24470415 None:intergenic 20.0%
!! TCAAATGATGCTTATATTTA+AGG - Chr3:24470913-24470932 None:intergenic 20.0%
!! TGAATTATGAAATGTTCATA+AGG + Chr3:24466303-24466322 MsG0380012782.01.T01:intron 20.0%
!!! AATTATTGATTTCAACAAGA+TGG - Chr3:24468742-24468761 None:intergenic 20.0%
!!! AGTTTGTAGCATTTTTTTTT+AGG - Chr3:24467036-24467055 None:intergenic 20.0%
!!! ATACTTTGGGAATTAAATTA+AGG - Chr3:24466939-24466958 None:intergenic 20.0%
!!! ATGAGTTTTCATATACTTTA+GGG + Chr3:24467062-24467081 MsG0380012782.01.T01:intron 20.0%
!!! CAAAAAAATCTGAAACTAAT+GGG + Chr3:24467465-24467484 MsG0380012782.01.T01:intron 20.0%
!!! GTTTGTAGCATTTTTTTTTA+GGG - Chr3:24467035-24467054 None:intergenic 20.0%
!!! TACTTTGGGAATTAAATTAA+GGG - Chr3:24466938-24466957 None:intergenic 20.0%
!!! TCAAAAAAATCTGAAACTAA+TGG + Chr3:24467464-24467483 MsG0380012782.01.T01:intron 20.0%
! AAAAAGAAAAAAAAGGTTGG+AGG + Chr3:24468219-24468238 MsG0380012782.01.T01:intron 25.0%
! AAAAATAGTTGTTAAGCGTT+TGG - Chr3:24468377-24468396 None:intergenic 25.0%
! AAAAGAAAAAAAAGGTTGGA+GGG + Chr3:24468220-24468239 MsG0380012782.01.T01:intron 25.0%
! AAATGAAAAAAGAAACAAGG+GGG - Chr3:24468649-24468668 None:intergenic 25.0%
! AATTTGTACAATTATACAGG+TGG - Chr3:24470771-24470790 None:intergenic 25.0%
! AGAATAAGTAACTACTTGTA+GGG - Chr3:24466867-24466886 None:intergenic 25.0%
! ATAAAAAAACCATTATGCCA+TGG + Chr3:24466809-24466828 MsG0380012782.01.T01:intron 25.0%
! ATAAATGTTGACAAAAAAGC+TGG + Chr3:24470131-24470150 MsG0380012782.01.T01:intron 25.0%
! ATCATTTATTATGCTTACAC+TGG + Chr3:24469404-24469423 MsG0380012782.01.T01:intron 25.0%
! ATTTCTTTCATAAACTGTCT+TGG - Chr3:24466573-24466592 None:intergenic 25.0%
! GCAAACTAATCCATTTATAT+CGG - Chr3:24467842-24467861 None:intergenic 25.0%
! TAACTTATGCATAAACACTT+CGG + Chr3:24470238-24470257 MsG0380012782.01.T01:intron 25.0%
! TAAGGTAATTCTACAATCAA+AGG - Chr3:24470378-24470397 None:intergenic 25.0%
! TAATGTTTCATCCAAGATAT+TGG + Chr3:24468791-24468810 MsG0380012782.01.T01:intron 25.0%
! TATTAATAGTATCACTCTCA+AGG + Chr3:24466086-24466105 MsG0380012782.01.T01:CDS 25.0%
! TGTGATTCTCTGTAATATTA+AGG - Chr3:24466736-24466755 None:intergenic 25.0%
! TGTTACATATTGTTAGTGTA+AGG + Chr3:24467640-24467659 MsG0380012782.01.T01:intron 25.0%
! TTCGATAAACTGATTAACTA+TGG + Chr3:24466341-24466360 MsG0380012782.01.T01:intron 25.0%
! TTTGTCTACAAATTCTATTC+AGG - Chr3:24470165-24470184 None:intergenic 25.0%
!! ACATGGTTTTTCATGTATTT+AGG + Chr3:24469345-24469364 MsG0380012782.01.T01:intron 25.0%
!! ATAAAACACTGTGAATCTTT+TGG + Chr3:24469041-24469060 MsG0380012782.01.T01:intron 25.0%
!! ATAAGTATTGTCAAACTGTT+TGG + Chr3:24466402-24466421 MsG0380012782.01.T01:intron 25.0%
!! CATGGTTTTTCATGTATTTA+GGG + Chr3:24469346-24469365 MsG0380012782.01.T01:intron 25.0%
!! CATTATTACAAAAGCATGTA+AGG + Chr3:24467711-24467730 MsG0380012782.01.T01:CDS 25.0%
!! GATGAGTTTTCATATACTTT+AGG + Chr3:24467061-24467080 MsG0380012782.01.T01:intron 25.0%
!! TAAACTGAATATGGATTTTC+AGG - Chr3:24468181-24468200 None:intergenic 25.0%
!! TAAGTATTGTCAAACTGTTT+GGG + Chr3:24466403-24466422 MsG0380012782.01.T01:intron 25.0%
!!! AACGACTTCATATATTTTAG+CGG + Chr3:24467094-24467113 MsG0380012782.01.T01:intron 25.0%
!!! AATATGGATCTTCTTTGTTT+TGG - Chr3:24468715-24468734 None:intergenic 25.0%
!!! ATATAAATGGATTAGTTTGC+TGG + Chr3:24467842-24467861 MsG0380012782.01.T01:intron 25.0%
!!! ATATGGATCTTCTTTGTTTT+GGG - Chr3:24468714-24468733 None:intergenic 25.0%
!!! CTTTATTTTCTCTGCATTTA+GGG + Chr3:24467406-24467425 MsG0380012782.01.T01:intron 25.0%
!!! CTTTTTGTTAGCTTTTACAT+TGG + Chr3:24466895-24466914 MsG0380012782.01.T01:intron 25.0%
!!! TAGATTTTAGCAAAACTGAT+TGG - Chr3:24467338-24467357 None:intergenic 25.0%
!!! TGTTGGTTTTTATATGACTT+CGG + Chr3:24468833-24468852 MsG0380012782.01.T01:intron 25.0%
!!! TTTTGGCTTGTTCAAAAAAA+AGG + Chr3:24468538-24468557 MsG0380012782.01.T01:intron 25.0%
AAACATCCTGGATTTCAAAA+GGG + Chr3:24469181-24469200 MsG0380012782.01.T01:CDS 30.0%
AAATTTGTGAACAACGGAAA+GGG + Chr3:24468276-24468295 MsG0380012782.01.T01:intron 30.0%
AATGAAAAAAGAAACAAGGG+GGG - Chr3:24468648-24468667 None:intergenic 30.0%
ATAAAAGCTGTGACAGTAAA+TGG - Chr3:24470507-24470526 None:intergenic 30.0%
ATGTTAGAGGAAAGAAACTT+TGG + Chr3:24466001-24466020 MsG0380012782.01.T01:CDS 30.0%
CAAGTAGTTACTTATTCTGT+TGG + Chr3:24466869-24466888 MsG0380012782.01.T01:intron 30.0%
CAGAATAAGTAACTACTTGT+AGG - Chr3:24466868-24466887 None:intergenic 30.0%
CATGTAAGTCATGTTATGTT+TGG - Chr3:24467622-24467641 None:intergenic 30.0%
CCTAAATGCAGAGAAAATAA+AGG - Chr3:24467408-24467427 None:intergenic 30.0%
CTAATAATAAGCTAACACAC+TGG + Chr3:24468436-24468455 MsG0380012782.01.T01:intron 30.0%
CTACAAAACTTAGTAACCTT+AGG - Chr3:24470858-24470877 None:intergenic 30.0%
CTGTAGAAATTTGTGAACAA+CGG + Chr3:24468270-24468289 MsG0380012782.01.T01:intron 30.0%
GAAGCGTATAAAATATACAC+CGG - Chr3:24469094-24469113 None:intergenic 30.0%
GTAGATATTTGATTGTGATG+TGG + Chr3:24468242-24468261 MsG0380012782.01.T01:intron 30.0%
GTTAAGAAATATGCATACTC+CGG - Chr3:24470222-24470241 None:intergenic 30.0%
GTTGTTCACAAATTTCTACA+GGG - Chr3:24468271-24468290 None:intergenic 30.0%
TAATTGGCAATAAAACCAAG+TGG + Chr3:24467886-24467905 MsG0380012782.01.T01:intron 30.0%
TCAAACACATTGTTGATATG+TGG + Chr3:24470426-24470445 MsG0380012782.01.T01:intron 30.0%
TCTCGTGCTAAAATATTATC+AGG + Chr3:24469713-24469732 MsG0380012782.01.T01:CDS 30.0%
TGATTAACTATGGATCTGTT+TGG + Chr3:24466351-24466370 MsG0380012782.01.T01:intron 30.0%
TGTTAGAGGAAAGAAACTTT+GGG + Chr3:24466002-24466021 MsG0380012782.01.T01:CDS 30.0%
TTCTCCAAGACAGTTTAAAA+GGG + Chr3:24466487-24466506 MsG0380012782.01.T01:intron 30.0%
TTTCCTCTAACATCAAGAAT+TGG - Chr3:24465994-24466013 None:intergenic 30.0%
TTTGTCAGAAAATGTACTTC+TGG - Chr3:24468897-24468916 None:intergenic 30.0%
! AAACTTCCAGAAGATCTTTT+TGG + Chr3:24469244-24469263 MsG0380012782.01.T01:CDS 30.0%
! AAACTTTAAAAGCTGATGTC+AGG - Chr3:24468990-24469009 None:intergenic 30.0%
! AATTTTACTTTGCATGTGAG+TGG + Chr3:24467991-24468010 MsG0380012782.01.T01:intron 30.0%
! AGTTAGAGCATCCAAAAATT+TGG + Chr3:24468616-24468635 MsG0380012782.01.T01:intron 30.0%
! GAAAATGGGAAATTGATGAT+GGG - Chr3:24465781-24465800 None:intergenic 30.0%
! GATTTCAGAAGTTTTACCTA+AGG + Chr3:24470839-24470858 MsG0380012782.01.T01:three_prime_UTR 30.0%
! GCAATGAAATTTTGAATCCA+CGG - Chr3:24467791-24467810 None:intergenic 30.0%
! GCCTTTTCATAAGAAACTAA+GGG - Chr3:24467491-24467510 None:intergenic 30.0%
! TCTTTAAGAATTGCATGACA+TGG + Chr3:24469328-24469347 MsG0380012782.01.T01:intron 30.0%
! TGCCTTTTCATAAGAAACTA+AGG - Chr3:24467492-24467511 None:intergenic 30.0%
! TTAGATTCTGAGGATTGTAT+TGG + Chr3:24470717-24470736 MsG0380012782.01.T01:CDS 30.0%
! TTTAAGGAAGTGGTTTTTGT+TGG - Chr3:24465806-24465825 None:intergenic 30.0%
!! AAGATCTTTTTGGTGAAAGA+TGG + Chr3:24469254-24469273 MsG0380012782.01.T01:CDS 30.0%
!! AGATCTTTTTGGTGAAAGAT+GGG + Chr3:24469255-24469274 MsG0380012782.01.T01:CDS 30.0%
!! AGTGCTTGTCATTACTTTTA+TGG + Chr3:24469128-24469147 MsG0380012782.01.T01:intron 30.0%
!! GGGTTTGAAATAAAGTTTTG+CGG - Chr3:24466847-24466866 None:intergenic 30.0%
!! GTCATTACTTTTATGGTTAG+AGG + Chr3:24469135-24469154 MsG0380012782.01.T01:CDS 30.0%
!! GTGTAGGTTTTTAGAAATGT+GGG + Chr3:24468946-24468965 MsG0380012782.01.T01:intron 30.0%
!! TATGTGTGTAACTGATTTGT+GGG - Chr3:24465638-24465657 None:intergenic 30.0%
!! TGTAGGTTTTTAGAAATGTG+GGG + Chr3:24468947-24468966 MsG0380012782.01.T01:intron 30.0%
!! TGTTGCTATTTGTGATGAAT+TGG + Chr3:24466116-24466135 MsG0380012782.01.T01:CDS 30.0%
!! TTTCTGAAACAGAACATGTT+TGG - Chr3:24465831-24465850 None:intergenic 30.0%
!!! ATTCCTCTTGTTTTAGTACA+AGG + Chr3:24469495-24469514 MsG0380012782.01.T01:intron 30.0%
!!! CCTTTATTTTCTCTGCATTT+AGG + Chr3:24467405-24467424 MsG0380012782.01.T01:intron 30.0%
!!! TATGGATCTTCTTTGTTTTG+GGG - Chr3:24468713-24468732 None:intergenic 30.0%
!!! TGTTAGCTTTTACATTGGTA+GGG + Chr3:24466900-24466919 MsG0380012782.01.T01:intron 30.0%
!!! TTGTTAGCTTTTACATTGGT+AGG + Chr3:24466899-24466918 MsG0380012782.01.T01:intron 30.0%
AAACCTTGGATCAAAAGCTT+AGG + Chr3:24467927-24467946 MsG0380012782.01.T01:intron 35.0%
AAATTCCAACTGAAAGAGTC+AGG - Chr3:24470578-24470597 None:intergenic 35.0%
AACCTTGGATCAAAAGCTTA+GGG + Chr3:24467928-24467947 MsG0380012782.01.T01:intron 35.0%
AACTAAAGAAGCTGAAGCTT+GGG + Chr3:24470641-24470660 MsG0380012782.01.T01:CDS 35.0%
AATTTGTGAACAACGGAAAG+GGG + Chr3:24468277-24468296 MsG0380012782.01.T01:intron 35.0%
AGACCAATTCTTGATGTTAG+AGG + Chr3:24465988-24466007 MsG0380012782.01.T01:CDS 35.0%
AGATAACATGTTTCAGCAGT+TGG - Chr3:24465913-24465932 None:intergenic 35.0%
ATAGTTGAGTAGATGACGTA+TGG - Chr3:24467221-24467240 None:intergenic 35.0%
ATCCTGACAGTATATTAAGC+TGG + Chr3:24465947-24465966 MsG0380012782.01.T01:CDS 35.0%
ATGCTTATATTTAAGGGCAG+AGG - Chr3:24470906-24470925 None:intergenic 35.0%
CATAAACTGTCTTGGAGAAA+TGG - Chr3:24466565-24466584 None:intergenic 35.0%
CATAACCATAACCATAACCA+TGG + Chr3:24465666-24465685 MsG0380012782.01.T01:exon 35.0%
CATGGTTATGGTTATGGTTA+TGG - Chr3:24465668-24465687 None:intergenic 35.0%
CGTTGTTCACAAATTTCTAC+AGG - Chr3:24468272-24468291 None:intergenic 35.0%
CTAAAGAAGCGAATGTTTCT+AGG - Chr3:24466153-24466172 None:intergenic 35.0%
CTAATCCATTTATATCGGCA+AGG - Chr3:24467837-24467856 None:intergenic 35.0%
CTAATGACTTTACCTGAGTA+AGG - Chr3:24469295-24469314 None:intergenic 35.0%
CTACAATCAAAGGAGGAATT+TGG - Chr3:24470368-24470387 None:intergenic 35.0%
CTAGAAACATTCGCTTCTTT+AGG + Chr3:24466151-24466170 MsG0380012782.01.T01:CDS 35.0%
CTTTCACCAAAAAGATCTTC+TGG - Chr3:24469253-24469272 None:intergenic 35.0%
GAAACATCCTGGATTTCAAA+AGG + Chr3:24469180-24469199 MsG0380012782.01.T01:CDS 35.0%
GAAATTTGTGAACAACGGAA+AGG + Chr3:24468275-24468294 MsG0380012782.01.T01:intron 35.0%
GAGTATGCTTTCCAATATCT+TGG - Chr3:24468805-24468824 None:intergenic 35.0%
GATAACATGTTTCAGCAGTT+GGG - Chr3:24465912-24465931 None:intergenic 35.0%
GCCCTTAGTTTCTTATGAAA+AGG + Chr3:24467487-24467506 MsG0380012782.01.T01:intron 35.0%
GCTAGAGTGACATTTAGTTA+TGG + Chr3:24468013-24468032 MsG0380012782.01.T01:intron 35.0%
GCTATTGTTTACTTACTCAC+TGG + Chr3:24466681-24466700 MsG0380012782.01.T01:intron 35.0%
GGAAAATGGGAAATTGATGA+TGG - Chr3:24465782-24465801 None:intergenic 35.0%
GGGCTAGATCTTGATTTATT+GGG + Chr3:24469641-24469660 MsG0380012782.01.T01:CDS 35.0%
GGTAATTCTACAATCAAAGG+AGG - Chr3:24470375-24470394 None:intergenic 35.0%
GTTCTCCAAGACAGTTTAAA+AGG + Chr3:24466486-24466505 MsG0380012782.01.T01:intron 35.0%
TAGAGTGACAATTACATGCA+TGG + Chr3:24467172-24467191 MsG0380012782.01.T01:intron 35.0%
TATGGTTATGGTTATGGCTA+TGG - Chr3:24465662-24465681 None:intergenic 35.0%
TCAACAAGATGGAGCAAATA+TGG - Chr3:24468731-24468750 None:intergenic 35.0%
TCCTGACAGTATATTAAGCT+GGG + Chr3:24465948-24465967 MsG0380012782.01.T01:CDS 35.0%
TGCTCAGCAGAAAACTATAT+AGG + Chr3:24467808-24467827 MsG0380012782.01.T01:intron 35.0%
TTGTACAATTATACAGGTGG+AGG - Chr3:24470768-24470787 None:intergenic 35.0%
TTTAAAAGCTGATGTCAGGA+AGG - Chr3:24468986-24469005 None:intergenic 35.0%
TTTAGCAAAACTGATTGGCA+AGG - Chr3:24467333-24467352 None:intergenic 35.0%
TTTCAGTTGGAATTTCGACT+CGG + Chr3:24470583-24470602 MsG0380012782.01.T01:CDS 35.0%
TTTGTTCAGTTACCTTACTC+AGG + Chr3:24469280-24469299 MsG0380012782.01.T01:CDS 35.0%
! ACTGTCACAGCTTTTATGAA+TGG + Chr3:24470510-24470529 MsG0380012782.01.T01:intron 35.0%
! ATGTTTGGAGTTTAAGGAAG+TGG - Chr3:24465816-24465835 None:intergenic 35.0%
! CACAGCTTTTATGAATGGAT+TGG + Chr3:24470515-24470534 MsG0380012782.01.T01:intron 35.0%
! CAGAACATGTTTGGAGTTTA+AGG - Chr3:24465822-24465841 None:intergenic 35.0%
! GAGGTCTGCAATTTCAATTT+TGG + Chr3:24468521-24468540 MsG0380012782.01.T01:intron 35.0%
! GGGGGAATAAACCAAATTTT+TGG - Chr3:24468630-24468649 None:intergenic 35.0%
! GGTTTTTGTTGGAGGAAAAT+GGG - Chr3:24465795-24465814 None:intergenic 35.0%
! TAAGCTTTTGATCCAAGGTT+TGG - Chr3:24467928-24467947 None:intergenic 35.0%
! TGACAATCTGAGACACTAAT+TGG + Chr3:24467870-24467889 MsG0380012782.01.T01:intron 35.0%
! TGAGGTAGGACTTTTCTTAT+AGG - Chr3:24470622-24470641 None:intergenic 35.0%
! TGGGCTAGATCTTGATTTAT+TGG + Chr3:24469640-24469659 MsG0380012782.01.T01:CDS 35.0%
! TGGTTTTTGTTGGAGGAAAA+TGG - Chr3:24465796-24465815 None:intergenic 35.0%
! TTCTAAAAACCTACACGTTC+TGG - Chr3:24468942-24468961 None:intergenic 35.0%
!! AGTAATGACAAGCACTGAAA+AGG - Chr3:24469124-24469143 None:intergenic 35.0%
!! ATTGATCAAAGAGAAGTGCT+AGG - Chr3:24470082-24470101 None:intergenic 35.0%
!! CGATGTTAGTTTGTTTGGAT+TGG + Chr3:24468339-24468358 MsG0380012782.01.T01:intron 35.0%
!! CGTGTAGGTTTTTAGAAATG+TGG + Chr3:24468945-24468964 MsG0380012782.01.T01:intron 35.0%
!! CTATGTGTGTAACTGATTTG+TGG - Chr3:24465639-24465658 None:intergenic 35.0%
!! GTAGGTTTTTAGAAATGTGG+GGG + Chr3:24468948-24468967 MsG0380012782.01.T01:intron 35.0%
!! TAGGTCGATGTTAGTTTGTT+TGG + Chr3:24468334-24468353 MsG0380012782.01.T01:intron 35.0%
!! TGGTGTCTTTAAGACATGTT+GGG + Chr3:24467522-24467541 MsG0380012782.01.T01:CDS 35.0%
!! TTTTAGAAATGTGGGGGATT+GGG + Chr3:24468954-24468973 MsG0380012782.01.T01:intron 35.0%
!! TTTTTAGAAATGTGGGGGAT+TGG + Chr3:24468953-24468972 MsG0380012782.01.T01:intron 35.0%
!!! ATGGATCTTCTTTGTTTTGG+GGG - Chr3:24468712-24468731 None:intergenic 35.0%
!!! ATTGATGATGGGTTTTGAAG+AGG - Chr3:24465770-24465789 None:intergenic 35.0%
!!! GTGGTTTTAAATAGTGGTTG+CGG + Chr3:24466709-24466728 MsG0380012782.01.T01:intron 35.0%
AAATCTAGGCCATGGCATAA+TGG - Chr3:24466821-24466840 None:intergenic 40.0%
AATCATACTCACCCGTTTAC+TGG - Chr3:24467758-24467777 None:intergenic 40.0%
ACCTTGGATCAAAAGCTTAG+GGG + Chr3:24467929-24467948 MsG0380012782.01.T01:intron 40.0%
ACTGTATACACGAAACATCC+TGG + Chr3:24469169-24469188 MsG0380012782.01.T01:CDS 40.0%
AGACATGTTGGGATTTCACA+TGG + Chr3:24467533-24467552 MsG0380012782.01.T01:CDS 40.0%
AGCATACTCATCTAGACTGT+TGG + Chr3:24468816-24468835 MsG0380012782.01.T01:intron 40.0%
AGCTTCAGCTTCTTTAGTTG+AGG - Chr3:24470640-24470659 None:intergenic 40.0%
AGTAGCCATGGTTATGGTTA+TGG - Chr3:24465674-24465693 None:intergenic 40.0%
ATCATACTCACCCGTTTACT+GGG - Chr3:24467757-24467776 None:intergenic 40.0%
ATTTGTGAACAACGGAAAGG+GGG + Chr3:24468278-24468297 MsG0380012782.01.T01:intron 40.0%
CAACACTTTGTAGTTAGCAC+CGG - Chr3:24468592-24468611 None:intergenic 40.0%
CAACTAAAGAAGCTGAAGCT+TGG + Chr3:24470640-24470659 MsG0380012782.01.T01:CDS 40.0%
CAGTATATTAAGCTGGGAGT+TGG + Chr3:24465954-24465973 MsG0380012782.01.T01:CDS 40.0%
CCAAGATGAGTTAGATTCTG+AGG + Chr3:24470707-24470726 MsG0380012782.01.T01:CDS 40.0%
CCTCAGAATCTAACTCATCT+TGG - Chr3:24470710-24470729 None:intergenic 40.0%
CTAACTCATCTTGGATTGCT+AGG - Chr3:24470701-24470720 None:intergenic 40.0%
CTCTCGAACGGCTATAATAA+AGG - Chr3:24469582-24469601 None:intergenic 40.0%
CTGCAATTTCAAAGACTGTC+TGG + Chr3:24468562-24468581 MsG0380012782.01.T01:intron 40.0%
CTTTATTATAGCCGTTCGAG+AGG + Chr3:24469580-24469599 MsG0380012782.01.T01:intron 40.0%
GACATGTTGGGATTTCACAT+GGG + Chr3:24467534-24467553 MsG0380012782.01.T01:CDS 40.0%
GGATTGTCTAATGGCAAAAG+AGG - Chr3:24469214-24469233 None:intergenic 40.0%
GGTTTCCTTGCCGATATAAA+TGG + Chr3:24467829-24467848 MsG0380012782.01.T01:intron 40.0%
GTCGCAAAAGGATTGTCTAA+TGG - Chr3:24469223-24469242 None:intergenic 40.0%
GTTGGTGTAGTTGAAAGATG+GGG - Chr3:24465725-24465744 None:intergenic 40.0%
TAAGAGCTCTTCCCAGTAAA+CGG + Chr3:24467743-24467762 MsG0380012782.01.T01:CDS 40.0%
TAAGCAGTGAGACAAGAGTT+TGG + Chr3:24470191-24470210 MsG0380012782.01.T01:intron 40.0%
TACAATTATACAGGTGGAGG+TGG - Chr3:24470765-24470784 None:intergenic 40.0%
TATGATTTCTGATTCTGCCG+TGG + Chr3:24467771-24467790 MsG0380012782.01.T01:intron 40.0%
TCAGCTTCTTTAGTTGAGGT+AGG - Chr3:24470636-24470655 None:intergenic 40.0%
TCCCAGCTTAATATACTGTC+AGG - Chr3:24465952-24465971 None:intergenic 40.0%
TCTAACCTGACTCTTTCAGT+TGG + Chr3:24470570-24470589 MsG0380012782.01.T01:CDS 40.0%
TCTGTAGCATCTCAACAACA+AGG - Chr3:24467008-24467027 None:intergenic 40.0%
TGACTTCGGATGTACACATT+CGG + Chr3:24468847-24468866 MsG0380012782.01.T01:intron 40.0%
TTAAGGGCAGAGGTAGTAAA+AGG - Chr3:24470896-24470915 None:intergenic 40.0%
TTTAGAAATGTGGGGGATTG+GGG + Chr3:24468955-24468974 MsG0380012782.01.T01:intron 40.0%
! AAGGAAGTGGTTTTTGTTGG+AGG - Chr3:24465803-24465822 None:intergenic 40.0%
! AAGTTTTGCGGCCAAAATCT+AGG - Chr3:24466835-24466854 None:intergenic 40.0%
! ACAAAAGCATGTAAGGAGCT+GGG + Chr3:24467718-24467737 MsG0380012782.01.T01:CDS 40.0%
! CAGCCTTGTACTAAAACAAG+AGG - Chr3:24469501-24469520 None:intergenic 40.0%
! GGTTGGTGTAGTTGAAAGAT+GGG - Chr3:24465726-24465745 None:intergenic 40.0%
! GTTGCCCTTTTAAACTGTCT+TGG - Chr3:24466494-24466513 None:intergenic 40.0%
! TACAAAAGCATGTAAGGAGC+TGG + Chr3:24467717-24467736 MsG0380012782.01.T01:CDS 40.0%
! TGAAAAGGCATGTTCATGTG+TGG + Chr3:24467502-24467521 MsG0380012782.01.T01:intron 40.0%
! TGACTCTACTTCCTTTTCAG+AGG + Chr3:24469064-24469083 MsG0380012782.01.T01:intron 40.0%
! TTATGCCATGGCCTAGATTT+TGG + Chr3:24466821-24466840 MsG0380012782.01.T01:intron 40.0%
! TTTTCGTGACTGCTGTATTG+TGG + Chr3:24468485-24468504 MsG0380012782.01.T01:intron 40.0%
!! GTGGTGTCTTTAAGACATGT+TGG + Chr3:24467521-24467540 MsG0380012782.01.T01:CDS 40.0%
!! TAGTTTGTTTGGATTGGCGT+CGG + Chr3:24468345-24468364 MsG0380012782.01.T01:intron 40.0%
!! TCTGGAAGTTTTGTCGCAAA+AGG - Chr3:24469235-24469254 None:intergenic 40.0%
!! TTTTGAAGAGGAGAGTTTGG+TGG - Chr3:24465758-24465777 None:intergenic 40.0%
!!! AGATGGGGTTTTGATTCTTG+TGG - Chr3:24465710-24465729 None:intergenic 40.0%
!!! GCAGTCGTGGTTTTAAATAG+TGG + Chr3:24466703-24466722 MsG0380012782.01.T01:intron 40.0%
!!! TTGGATCCCTTTTGAAATCC+AGG - Chr3:24469190-24469209 None:intergenic 40.0%
AACCACGATTGAGGCTTCAT+CGG - Chr3:24466770-24466789 None:intergenic 45.0%
AAGAGCTCTTCCCAGTAAAC+GGG + Chr3:24467744-24467763 MsG0380012782.01.T01:CDS 45.0%
AAGATGCAACAGCCAATCCT+GGG - Chr3:24469694-24469713 None:intergenic 45.0%
AGATGACGTATGGTGTCCTA+TGG - Chr3:24467211-24467230 None:intergenic 45.0%
AGCTGTGACAGTAAATGGTG+AGG - Chr3:24470502-24470521 None:intergenic 45.0%
AGTACACTTCCAGAACGTGT+AGG + Chr3:24468930-24468949 MsG0380012782.01.T01:intron 45.0%
AGTTGCATTGCAGCTGTTGT+AGG + Chr3:24468315-24468334 MsG0380012782.01.T01:intron 45.0%
ATACTGTCAGGATCAGCTTC+TGG - Chr3:24465940-24465959 None:intergenic 45.0%
ATGCACGTTACAAGACCACT+TGG - Chr3:24467904-24467923 None:intergenic 45.0%
CACTCTCTCTAACACTCTAG+TGG - Chr3:24470043-24470062 None:intergenic 45.0%
GAAGCAGCTAAGAAAGCTTC+TGG + Chr3:24470663-24470682 MsG0380012782.01.T01:CDS 45.0%
GACAGTTTAAAAGGGCAACC+CGG + Chr3:24466495-24466514 MsG0380012782.01.T01:intron 45.0%
GCCACATCACTAATCAACAC+GGG - Chr3:24467276-24467295 None:intergenic 45.0%
GCTGTGACAGTAAATGGTGA+GGG - Chr3:24470501-24470520 None:intergenic 45.0%
GCTTAGAGTAGCCATGGTTA+TGG - Chr3:24465680-24465699 None:intergenic 45.0%
GGAGCTCTGTTCCATTGAAA+CGG + Chr3:24470536-24470555 MsG0380012782.01.T01:CDS 45.0%
GGCCACATCACTAATCAACA+CGG - Chr3:24467277-24467296 None:intergenic 45.0%
GTCTAATGGCAAAAGAGGCT+TGG - Chr3:24469209-24469228 None:intergenic 45.0%
GTTGAAGCTTAGAGTAGCCA+TGG - Chr3:24465686-24465705 None:intergenic 45.0%
TACTGTCAGGATCAGCTTCT+GGG - Chr3:24465939-24465958 None:intergenic 45.0%
TATTATAGCCGTTCGAGAGG+AGG + Chr3:24469583-24469602 MsG0380012782.01.T01:intron 45.0%
TCAAAGACTGTCTGGTAGAC+CGG + Chr3:24468570-24468589 MsG0380012782.01.T01:intron 45.0%
TCAGCCTCAGAGGAAAGATT+TGG + Chr3:24469608-24469627 MsG0380012782.01.T01:CDS 45.0%
TGGTACTAAGTCCTCACCAT+AGG + Chr3:24467192-24467211 MsG0380012782.01.T01:intron 45.0%
TTGTGGCTGATCACATTACG+AGG + Chr3:24468502-24468521 MsG0380012782.01.T01:intron 45.0%
! ACCCCTAAGCTTTTGATCCA+AGG - Chr3:24467933-24467952 None:intergenic 45.0%
!! AAATCTTTCCTCTGAGGCTG+AGG - Chr3:24469609-24469628 None:intergenic 45.0%
!! AAGCGAATGTTTCTAGGCAC+AGG - Chr3:24466147-24466166 None:intergenic 45.0%
!! ACGTTCTGGAAGTGTACTTC+TGG - Chr3:24468928-24468947 None:intergenic 45.0%
!! AGACAAGAGTTTGGTCTTGC+CGG + Chr3:24470200-24470219 MsG0380012782.01.T01:intron 45.0%
!! AGAGTTTGGTGGTGATGATG+GGG - Chr3:24465747-24465766 None:intergenic 45.0%
!! CTGAGGATTGTATTGGCTTC+TGG + Chr3:24470724-24470743 MsG0380012782.01.T01:CDS 45.0%
!! GAGAGTTTGGTGGTGATGAT+GGG - Chr3:24465748-24465767 None:intergenic 45.0%
!! GGGTTGGTGTAGTTGAAAGA+TGG - Chr3:24465727-24465746 None:intergenic 45.0%
!! TCCCGTGTTGATTAGTGATG+TGG + Chr3:24467272-24467291 MsG0380012782.01.T01:intron 45.0%
!! TTACGGTGTTACGAGCTGTT+TGG + Chr3:24466207-24466226 MsG0380012782.01.T01:intron 45.0%
!!! GGGTTTTGAAGAGGAGAGTT+TGG - Chr3:24465761-24465780 None:intergenic 45.0%
!!! GTTTTGGCGTTGACATGCTA+TGG + Chr3:24468398-24468417 MsG0380012782.01.T01:intron 45.0%
!! TATTTATAAAAAGAAAAAAA+AGG + Chr3:24468212-24468231 MsG0380012782.01.T01:intron 5.0%
!!! TAATTATTTTTATATACTTT+GGG - Chr3:24466952-24466971 None:intergenic 5.0%
AACAGCCAATCCTGGGATCA+AGG - Chr3:24469687-24469706 None:intergenic 50.0%
ACCACGATTGAGGCTTCATC+GGG - Chr3:24466769-24466788 None:intergenic 50.0%
ACGTATGGTGTCCTATGGTG+AGG - Chr3:24467206-24467225 None:intergenic 50.0%
ACTAAAGCTCCCGCATATGC+AGG + Chr3:24466521-24466540 MsG0380012782.01.T01:CDS 50.0%
CTAAAGCTCCCGCATATGCA+GGG + Chr3:24466522-24466541 MsG0380012782.01.T01:CDS 50.0%
GAAGACCTTGATCCCAGGAT+TGG + Chr3:24469679-24469698 MsG0380012782.01.T01:CDS 50.0%
GAAGATGCAACAGCCAATCC+TGG - Chr3:24469695-24469714 None:intergenic 50.0%
GCAGCTAAGAAAGCTTCTGG+AGG + Chr3:24470666-24470685 MsG0380012782.01.T01:CDS 50.0%
GTAACGTGCATGCCAAACCT+TGG + Chr3:24467913-24467932 MsG0380012782.01.T01:intron 50.0%
TACTTACTCACTGGCAGTCG+TGG + Chr3:24466690-24466709 MsG0380012782.01.T01:intron 50.0%
!! CTTCCTTTTCAGAGGTGCAC+CGG + Chr3:24469072-24469091 MsG0380012782.01.T01:intron 50.0%
!! GGAGAGTTTGGTGGTGATGA+TGG - Chr3:24465749-24465768 None:intergenic 50.0%
!! TTTGGTGGTGATGATGGGGT+TGG - Chr3:24465743-24465762 None:intergenic 50.0%
CATATGCAGGGTTCGGGAAG+GGG + Chr3:24466534-24466553 MsG0380012782.01.T01:intron 55.0%
CTGCAACGCAACCACGATTG+AGG - Chr3:24466779-24466798 None:intergenic 55.0%
CTTCCCGAACCCTGCATATG+CGG - Chr3:24466534-24466553 None:intergenic 55.0%
GAAATGTGGGGGATTGGGGA+AGG + Chr3:24468959-24468978 MsG0380012782.01.T01:intron 55.0%
GACGAGAAGACCTTGATCCC+AGG + Chr3:24469674-24469693 MsG0380012782.01.T01:CDS 55.0%
GCATATGCAGGGTTCGGGAA+GGG + Chr3:24466533-24466552 MsG0380012782.01.T01:intron 55.0%
GCGTGCAGTGTCCGTTTCAA+TGG - Chr3:24470550-24470569 None:intergenic 55.0%
GTGTATGTCTGCTGCGTTGC+AGG + Chr3:24467675-24467694 MsG0380012782.01.T01:intron 55.0%
TGCGGCCAAAATCTAGGCCA+TGG - Chr3:24466829-24466848 None:intergenic 55.0%
TTCCCGAACCCTGCATATGC+GGG - Chr3:24466533-24466552 None:intergenic 55.0%
! ACACCGGTGCACCTCTGAAA+AGG - Chr3:24469078-24469097 None:intergenic 55.0%
! ATGCGGGAGCTTTAGTGCAC+CGG - Chr3:24466517-24466536 None:intergenic 55.0%
CGCATATGCAGGGTTCGGGA+AGG + Chr3:24466532-24466551 MsG0380012782.01.T01:intron 60.0%
CTCCCGCATATGCAGGGTTC+GGG + Chr3:24466528-24466547 MsG0380012782.01.T01:intron 60.0%
GCCCGATGAAGCCTCAATCG+TGG + Chr3:24466765-24466784 MsG0380012782.01.T01:intron 60.0%
GCTCCCGCATATGCAGGGTT+CGG + Chr3:24466527-24466546 MsG0380012782.01.T01:intron 60.0%
! TGCGGGAGCTTTAGTGCACC+GGG - Chr3:24466516-24466535 None:intergenic 60.0%
AGAGGAGGCCTCAGCCTCAG+AGG + Chr3:24469598-24469617 MsG0380012782.01.T01:CDS 65.0%
GGCTGAGGCCTCCTCTCGAA+CGG - Chr3:24469594-24469613 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr3 gene 24465634 24470975 24465634 ID=MsG0380012782.01;Name=MsG0380012782.01
Chr3 mRNA 24465634 24470975 24465634 ID=MsG0380012782.01.T01;Parent=MsG0380012782.01;Name=MsG0380012782.01.T01;_AED=0.50;_eAED=0.53;_QI=51|0.5|0.71|1|1|1|7|196|407
Chr3 exon 24465634 24466172 24465634 ID=MsG0380012782.01.T01:exon:4737;Parent=MsG0380012782.01.T01
Chr3 exon 24466500 24466543 24466500 ID=MsG0380012782.01.T01:exon:4738;Parent=MsG0380012782.01.T01
Chr3 exon 24467509 24467555 24467509 ID=MsG0380012782.01.T01:exon:4739;Parent=MsG0380012782.01.T01
Chr3 exon 24467697 24467765 24467697 ID=MsG0380012782.01.T01:exon:4740;Parent=MsG0380012782.01.T01
Chr3 exon 24469130 24469301 24469130 ID=MsG0380012782.01.T01:exon:4741;Parent=MsG0380012782.01.T01
Chr3 exon 24469591 24469734 24469591 ID=MsG0380012782.01.T01:exon:4742;Parent=MsG0380012782.01.T01
Chr3 exon 24470520 24470975 24470520 ID=MsG0380012782.01.T01:exon:4743;Parent=MsG0380012782.01.T01
Chr3 five_prime_UTR 24465634 24465684 24465634 ID=MsG0380012782.01.T01:five_prime_utr;Parent=MsG0380012782.01.T01
Chr3 CDS 24465685 24466172 24465685 ID=MsG0380012782.01.T01:cds;Parent=MsG0380012782.01.T01
Chr3 CDS 24466500 24466543 24466500 ID=MsG0380012782.01.T01:cds;Parent=MsG0380012782.01.T01
Chr3 CDS 24467509 24467555 24467509 ID=MsG0380012782.01.T01:cds;Parent=MsG0380012782.01.T01
Chr3 CDS 24467697 24467765 24467697 ID=MsG0380012782.01.T01:cds;Parent=MsG0380012782.01.T01
Chr3 CDS 24469130 24469301 24469130 ID=MsG0380012782.01.T01:cds;Parent=MsG0380012782.01.T01
Chr3 CDS 24469591 24469734 24469591 ID=MsG0380012782.01.T01:cds;Parent=MsG0380012782.01.T01
Chr3 CDS 24470520 24470779 24470520 ID=MsG0380012782.01.T01:cds;Parent=MsG0380012782.01.T01
Chr3 three_prime_UTR 24470780 24470975 24470780 ID=MsG0380012782.01.T01:three_prime_utr;Parent=MsG0380012782.01.T01
Gene Sequence

>MsG0380012782.01.T01

ATGGCTACTCTAAGCTTCAACTCCACAAGAATCAAAACCCCATCTTTCAACTACACCAACCCCATCATCACCACCAAACTCTCCTCTTCAAAACCCATCATCAATTTCCCATTTTCCTCCAACAAAAACCACTTCCTTAAACTCCAAACATGTTCTGTTTCAGAAACATCAGCAACAACAACACAGAAAGACATTGAAGAAGAAGAAGAAGAAGAGAAAGAAGACCCAACTGCTGAAACATGTTATCTTGACCCAGAAGCTGATCCTGACAGTATATTAAGCTGGGAGTTGGATTTTTGTTCTAGACCAATTCTTGATGTTAGAGGAAAGAAACTTTGGGAGCTTGTTGTTTGTGATAAATCTCTTTCACTTCAATATACTAAGTATTTTCCTAATAATGTTATTAATAGTATCACTCTCAAGGATTCTATTGTTGCTATTTGTGATGAATTGGATTTACCTGTGCCTAGAAACATTCGCTTCTTTAGTTTAAAAGGGCAACCCGGTGCACTAAAGCTCCCGCATATGCAGGGCATGTTCATGTGTGGTGTCTTTAAGACATGTTGGGATTTCACATGGGTCACAGATGCAAACATTATTACAAAAGCATGTAAGGAGCTGGGCATAAGAGCTCTTCCCAGTAAACGGTGCTTGTCATTACTTTTATGGTTAGAGGAACGCTATGAGACTGTATACACGAAACATCCTGGATTTCAAAAGGGATCCAAGCCTCTTTTGCCATTAGACAATCCTTTTGCGACAAAACTTCCAGAAGATCTTTTTGGTGAAAGATGGGCTTTTGTTCAGTTACCTTACTCAGCCGTTCGAGAGGAGGCCTCAGCCTCAGAGGAAAGATTTGGATATGGTTCTGGGCTAGATCTTGATTTATTGGGTATTGAAATCGACGAGAAGACCTTGATCCCAGGATTGGCTGTTGCATCTTCTCGTGCTAAAATATTATCAGCTTTTATGAATGGATTGGAGCTCTGTTCCATTGAAACGGACACTGCACGCTCTAACCTGACTCTTTCAGTTGGAATTTCGACTCGGTATGTATATGCGACCTATAAGAAAAGTCCTACCTCAACTAAAGAAGCTGAAGCTTGGGAAGCAGCTAAGAAAGCTTCTGGAGGTTTGCATTTCCTAGCAATCCAAGATGAGTTAGATTCTGAGGATTGTATTGGCTTCTGGCTTTTGCTAGACTTGCCACCTCCACCTGTATAA

Protein sequence

>MsG0380012782.01.T01

MATLSFNSTRIKTPSFNYTNPIITTKLSSSKPIINFPFSSNKNHFLKLQTCSVSETSATTTQKDIEEEEEEEKEDPTAETCYLDPEADPDSILSWELDFCSRPILDVRGKKLWELVVCDKSLSLQYTKYFPNNVINSITLKDSIVAICDELDLPVPRNIRFFSLKGQPGALKLPHMQGMFMCGVFKTCWDFTWVTDANIITKACKELGIRALPSKRCLSLLLWLEERYETVYTKHPGFQKGSKPLLPLDNPFATKLPEDLFGERWAFVQLPYSAVREEASASEERFGYGSGLDLDLLGIEIDEKTLIPGLAVASSRAKILSAFMNGLELCSIETDTARSNLTLSVGISTRYVYATYKKSPTSTKEAEAWEAAKKASGGLHFLAIQDELDSEDCIGFWLLLDLPPPPV*