Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0680030476.01.T01 | XP_013450817.1 | 85.987 | 157 | 16 | 3 | 22 | 173 | 15 | 170 | 1.77E-86 | 261 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0680030476.01.T01 | P41210 | 72.611 | 157 | 38 | 3 | 22 | 173 | 11 | 167 | 3.79E-69 | 210 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0680030476.01.T01 | I3SUA4 | 85.987 | 157 | 16 | 3 | 22 | 173 | 15 | 170 | 8.47e-87 | 261 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0180005990.01 | MsG0680030476.01 | 0.804439 | 2.159431e-49 | 1.113394e-46 |
MsG0280011093.01 | MsG0680030476.01 | 0.808127 | 3.608232e-50 | 2.046281e-47 |
MsG0580027031.01 | MsG0680030476.01 | 0.807376 | 5.209629e-50 | 2.897000e-47 |
MsG0680030476.01 | MsG0680035475.01 | 0.800316 | 1.526328e-48 | 7.085196e-46 |
PPI
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0680030476.01.T01 | MTR_6g007613 | 85.987 | 157 | 16 | 3 | 22 | 173 | 15 | 170 | 2.15e-90 | 261 |
MsG0680030476.01.T01 | MTR_7g074020 | 76.023 | 171 | 37 | 2 | 7 | 173 | 1 | 171 | 1.42e-85 | 249 |
MsG0680030476.01.T01 | MTR_6g007613 | 96.552 | 116 | 2 | 1 | 22 | 135 | 15 | 130 | 1.49e-75 | 223 |
MsG0680030476.01.T01 | MTR_7g074020 | 93.103 | 116 | 6 | 1 | 22 | 135 | 16 | 131 | 3.48e-72 | 215 |
MsG0680030476.01.T01 | MTR_5g088320 | 39.161 | 143 | 83 | 2 | 28 | 166 | 4 | 146 | 1.46e-26 | 98.6 |
MsG0680030476.01.T01 | MTR_5g088320 | 43.421 | 76 | 43 | 0 | 25 | 100 | 74 | 149 | 1.20e-12 | 62.4 |
MsG0680030476.01.T01 | MTR_6g025320 | 39.161 | 143 | 83 | 2 | 28 | 166 | 4 | 146 | 3.24e-26 | 97.8 |
MsG0680030476.01.T01 | MTR_6g025320 | 43.421 | 76 | 43 | 0 | 25 | 100 | 74 | 149 | 1.26e-12 | 62.4 |
MsG0680030476.01.T01 | MTR_1g076650 | 38.889 | 144 | 84 | 2 | 27 | 166 | 3 | 146 | 3.29e-26 | 97.8 |
MsG0680030476.01.T01 | MTR_1g076650 | 43.836 | 73 | 41 | 0 | 25 | 97 | 74 | 146 | 4.42e-13 | 63.5 |
MsG0680030476.01.T01 | MTR_7g087610 | 38.462 | 143 | 84 | 2 | 28 | 166 | 4 | 146 | 6.81e-26 | 97.1 |
MsG0680030476.01.T01 | MTR_7g087610 | 44.737 | 76 | 42 | 0 | 25 | 100 | 74 | 149 | 2.48e-13 | 64.3 |
MsG0680030476.01.T01 | MTR_1g041285 | 40.741 | 135 | 76 | 2 | 36 | 166 | 12 | 146 | 1.17e-23 | 91.3 |
MsG0680030476.01.T01 | MTR_1g041285 | 38.202 | 89 | 49 | 1 | 15 | 97 | 58 | 146 | 2.06e-11 | 59.3 |
MsG0680030476.01.T01 | MTR_1g032070 | 33.333 | 144 | 92 | 2 | 32 | 171 | 42 | 185 | 4.59e-16 | 72.8 |
MsG0680030476.01.T01 | MTR_1g071150 | 35.374 | 147 | 88 | 4 | 27 | 167 | 3 | 148 | 1.47e-15 | 70.1 |
MsG0680030476.01.T01 | MTR_1g071150 | 38.961 | 77 | 43 | 1 | 21 | 97 | 73 | 145 | 4.47e-11 | 58.2 |
MsG0680030476.01.T01 | MTR_7g075040 | 33.333 | 159 | 87 | 6 | 24 | 166 | 35 | 190 | 1.59e-15 | 71.2 |
MsG0680030476.01.T01 | MTR_4g067270 | 30.986 | 142 | 92 | 3 | 36 | 171 | 5 | 146 | 2.29e-15 | 69.7 |
MsG0680030476.01.T01 | MTR_8g105230 | 31.469 | 143 | 90 | 3 | 24 | 162 | 28 | 166 | 5.19e-15 | 69.7 |
MsG0680030476.01.T01 | MTR_0168s0120 | 35.455 | 110 | 67 | 2 | 61 | 166 | 1 | 110 | 8.18e-15 | 67.4 |
MsG0680030476.01.T01 | MTR_0168s0120 | 43.421 | 76 | 43 | 0 | 25 | 100 | 38 | 113 | 4.60e-13 | 62.8 |
MsG0680030476.01.T01 | MTR_6g025320 | 35.455 | 110 | 67 | 2 | 61 | 166 | 1 | 110 | 8.18e-15 | 67.4 |
MsG0680030476.01.T01 | MTR_6g025320 | 43.421 | 76 | 43 | 0 | 25 | 100 | 38 | 113 | 4.60e-13 | 62.8 |
MsG0680030476.01.T01 | MTR_3g067610 | 34.286 | 140 | 84 | 4 | 34 | 169 | 3 | 138 | 9.72e-15 | 67.8 |
MsG0680030476.01.T01 | MTR_8g107110 | 33.088 | 136 | 86 | 3 | 36 | 167 | 24 | 158 | 1.69e-14 | 67.8 |
MsG0680030476.01.T01 | MTR_6g079570 | 38.961 | 77 | 47 | 0 | 25 | 101 | 88 | 164 | 3.54e-14 | 67.0 |
MsG0680030476.01.T01 | MTR_7g106710 | 31.944 | 144 | 93 | 4 | 28 | 168 | 432 | 573 | 6.64e-14 | 68.9 |
MsG0680030476.01.T01 | MTR_5g079340 | 33.333 | 135 | 85 | 3 | 36 | 166 | 4 | 137 | 1.83e-13 | 64.3 |
MsG0680030476.01.T01 | MTR_5g079340 | 37.037 | 81 | 48 | 2 | 21 | 98 | 58 | 138 | 8.72e-11 | 57.4 |
MsG0680030476.01.T01 | MTR_8g095440 | 34.559 | 136 | 82 | 4 | 37 | 168 | 336 | 468 | 1.95e-13 | 67.8 |
MsG0680030476.01.T01 | MTR_1g055255 | 33.333 | 135 | 85 | 4 | 37 | 168 | 430 | 562 | 5.34e-13 | 66.2 |
MsG0680030476.01.T01 | MTR_8g099095 | 33.824 | 136 | 84 | 4 | 37 | 168 | 372 | 505 | 6.63e-13 | 66.2 |
MsG0680030476.01.T01 | MTR_5g009830 | 32.609 | 138 | 83 | 4 | 37 | 168 | 372 | 505 | 6.70e-13 | 66.2 |
MsG0680030476.01.T01 | MTR_1g096490 | 32.353 | 136 | 85 | 4 | 37 | 168 | 336 | 468 | 8.11e-13 | 65.9 |
MsG0680030476.01.T01 | MTR_8g036075 | 34.266 | 143 | 82 | 5 | 36 | 166 | 49 | 191 | 8.87e-13 | 63.9 |
MsG0680030476.01.T01 | MTR_7g090450 | 48.529 | 68 | 34 | 1 | 31 | 97 | 145 | 212 | 3.32e-12 | 62.8 |
MsG0680030476.01.T01 | MTR_3g083470 | 44.444 | 63 | 35 | 0 | 35 | 97 | 155 | 217 | 3.93e-12 | 62.8 |
MsG0680030476.01.T01 | MTR_3g098090 | 30.128 | 156 | 98 | 5 | 21 | 168 | 318 | 470 | 8.38e-12 | 62.8 |
MsG0680030476.01.T01 | MTR_5g011850 | 26.761 | 142 | 98 | 3 | 29 | 166 | 5 | 144 | 9.78e-12 | 60.1 |
MsG0680030476.01.T01 | MTR_3g098070 | 31.618 | 136 | 86 | 4 | 37 | 168 | 335 | 467 | 1.08e-11 | 62.4 |
MsG0680030476.01.T01 | MTR_1g046950 | 30.935 | 139 | 90 | 3 | 36 | 168 | 4 | 142 | 1.69e-11 | 59.3 |
MsG0680030476.01.T01 | MTR_1g046950 | 39.394 | 66 | 40 | 0 | 33 | 98 | 76 | 141 | 2.22e-11 | 58.9 |
MsG0680030476.01.T01 | MTR_5g092810 | 39.394 | 99 | 51 | 3 | 28 | 122 | 389 | 482 | 2.40e-11 | 61.6 |
MsG0680030476.01.T01 | MTR_4g132040 | 36.111 | 144 | 79 | 7 | 37 | 173 | 401 | 538 | 2.57e-11 | 61.6 |
MsG0680030476.01.T01 | MTR_0028s0170 | 30.882 | 136 | 88 | 4 | 37 | 168 | 384 | 517 | 4.17e-11 | 60.8 |
MsG0680030476.01.T01 | MTR_7g089760 | 32.394 | 142 | 90 | 3 | 36 | 171 | 5 | 146 | 4.96e-11 | 58.2 |
MsG0680030476.01.T01 | MTR_7g115040 | 34.074 | 135 | 85 | 2 | 36 | 166 | 12 | 146 | 5.05e-11 | 58.2 |
MsG0680030476.01.T01 | MTR_5g089320 | 30.435 | 138 | 86 | 4 | 37 | 168 | 374 | 507 | 7.02e-11 | 60.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0680030476.01.T01 | AT3G50360 | 69.481 | 154 | 43 | 2 | 22 | 171 | 13 | 166 | 1.11e-64 | 196 |
MsG0680030476.01.T01 | AT4G37010 | 54.375 | 160 | 63 | 3 | 16 | 171 | 13 | 166 | 4.15e-48 | 154 |
MsG0680030476.01.T01 | AT4G37010 | 54.375 | 160 | 63 | 3 | 16 | 171 | 17 | 170 | 4.39e-48 | 154 |
MsG0680030476.01.T01 | AT5G37780 | 39.161 | 143 | 83 | 2 | 28 | 166 | 4 | 146 | 6.37e-27 | 99.8 |
MsG0680030476.01.T01 | AT5G37780 | 48.485 | 66 | 34 | 0 | 35 | 100 | 84 | 149 | 1.05e-12 | 62.8 |
MsG0680030476.01.T01 | AT1G66410 | 39.161 | 143 | 83 | 2 | 28 | 166 | 4 | 146 | 6.37e-27 | 99.8 |
MsG0680030476.01.T01 | AT1G66410 | 48.485 | 66 | 34 | 0 | 35 | 100 | 84 | 149 | 1.05e-12 | 62.8 |
MsG0680030476.01.T01 | AT3G56800 | 39.860 | 143 | 82 | 2 | 28 | 166 | 4 | 146 | 1.24e-26 | 99.0 |
MsG0680030476.01.T01 | AT3G56800 | 43.421 | 76 | 43 | 0 | 25 | 100 | 74 | 149 | 9.64e-13 | 62.8 |
MsG0680030476.01.T01 | AT2G27030 | 39.860 | 143 | 82 | 2 | 28 | 166 | 4 | 146 | 1.24e-26 | 99.0 |
MsG0680030476.01.T01 | AT2G27030 | 43.421 | 76 | 43 | 0 | 25 | 100 | 74 | 149 | 9.64e-13 | 62.8 |
MsG0680030476.01.T01 | AT2G41110 | 39.860 | 143 | 82 | 2 | 28 | 166 | 4 | 146 | 1.24e-26 | 99.0 |
MsG0680030476.01.T01 | AT2G41110 | 43.421 | 76 | 43 | 0 | 25 | 100 | 74 | 149 | 9.64e-13 | 62.8 |
MsG0680030476.01.T01 | AT2G27030 | 39.860 | 143 | 82 | 2 | 28 | 166 | 4 | 146 | 1.91e-26 | 99.4 |
MsG0680030476.01.T01 | AT2G27030 | 43.421 | 76 | 43 | 0 | 25 | 100 | 74 | 149 | 9.06e-13 | 63.5 |
MsG0680030476.01.T01 | AT3G43810 | 39.161 | 143 | 83 | 2 | 28 | 166 | 4 | 146 | 3.39e-26 | 97.8 |
MsG0680030476.01.T01 | AT3G43810 | 43.421 | 76 | 43 | 0 | 25 | 100 | 74 | 149 | 1.32e-12 | 62.4 |
MsG0680030476.01.T01 | AT5G21274 | 39.161 | 143 | 83 | 2 | 28 | 166 | 4 | 146 | 5.11e-26 | 97.4 |
MsG0680030476.01.T01 | AT5G21274 | 42.105 | 76 | 44 | 0 | 25 | 100 | 74 | 149 | 4.00e-12 | 61.2 |
MsG0680030476.01.T01 | AT3G43810 | 39.161 | 143 | 83 | 2 | 28 | 166 | 4 | 146 | 7.74e-26 | 98.6 |
MsG0680030476.01.T01 | AT3G43810 | 42.667 | 75 | 43 | 0 | 25 | 99 | 74 | 148 | 9.19e-12 | 61.6 |
MsG0680030476.01.T01 | AT3G22930 | 37.762 | 143 | 85 | 2 | 28 | 166 | 27 | 169 | 6.11e-24 | 92.8 |
MsG0680030476.01.T01 | AT5G37780 | 35.443 | 158 | 83 | 3 | 28 | 166 | 4 | 161 | 4.70e-23 | 90.1 |
MsG0680030476.01.T01 | AT5G37780 | 48.485 | 66 | 34 | 0 | 35 | 100 | 99 | 164 | 1.08e-12 | 63.2 |
MsG0680030476.01.T01 | AT2G41110 | 36.774 | 155 | 82 | 3 | 28 | 166 | 4 | 158 | 5.58e-23 | 89.7 |
MsG0680030476.01.T01 | AT2G41110 | 43.421 | 76 | 43 | 0 | 25 | 100 | 86 | 161 | 1.49e-12 | 62.8 |
MsG0680030476.01.T01 | AT3G22930 | 41.905 | 105 | 59 | 1 | 28 | 130 | 27 | 131 | 5.24e-22 | 86.7 |
MsG0680030476.01.T01 | AT4G14640 | 36.620 | 142 | 86 | 2 | 29 | 166 | 6 | 147 | 5.35e-22 | 87.0 |
MsG0680030476.01.T01 | AT5G37780 | 33.136 | 169 | 83 | 3 | 28 | 166 | 4 | 172 | 2.96e-21 | 85.9 |
MsG0680030476.01.T01 | AT5G37780 | 48.485 | 66 | 34 | 0 | 35 | 100 | 110 | 175 | 1.19e-12 | 63.2 |
MsG0680030476.01.T01 | AT1G66410 | 36.601 | 153 | 83 | 3 | 28 | 166 | 4 | 156 | 1.15e-20 | 84.0 |
MsG0680030476.01.T01 | AT1G66410 | 48.485 | 66 | 34 | 0 | 35 | 100 | 94 | 159 | 9.42e-13 | 63.2 |
MsG0680030476.01.T01 | AT1G24620 | 32.759 | 174 | 101 | 4 | 13 | 172 | 6 | 177 | 3.74e-20 | 83.2 |
MsG0680030476.01.T01 | AT4G14640 | 40.777 | 103 | 59 | 1 | 29 | 129 | 6 | 108 | 6.16e-20 | 80.9 |
MsG0680030476.01.T01 | AT5G37780 | 36.066 | 122 | 74 | 2 | 49 | 166 | 12 | 133 | 1.64e-18 | 77.4 |
MsG0680030476.01.T01 | AT5G37780 | 48.485 | 66 | 34 | 0 | 35 | 100 | 71 | 136 | 4.44e-13 | 63.5 |
MsG0680030476.01.T01 | AT1G66410 | 35.455 | 110 | 67 | 2 | 61 | 166 | 1 | 110 | 3.86e-15 | 68.2 |
MsG0680030476.01.T01 | AT1G66410 | 48.485 | 66 | 34 | 0 | 35 | 100 | 48 | 113 | 3.00e-13 | 63.2 |
MsG0680030476.01.T01 | AT1G66410 | 35.455 | 110 | 67 | 2 | 61 | 166 | 1 | 110 | 3.86e-15 | 68.2 |
MsG0680030476.01.T01 | AT1G66410 | 48.485 | 66 | 34 | 0 | 35 | 100 | 48 | 113 | 3.00e-13 | 63.2 |
MsG0680030476.01.T01 | AT2G43290 | 31.973 | 147 | 89 | 5 | 36 | 171 | 65 | 211 | 4.30e-15 | 70.5 |
MsG0680030476.01.T01 | AT1G05990 | 34.266 | 143 | 87 | 4 | 36 | 171 | 5 | 147 | 6.20e-15 | 68.6 |
MsG0680030476.01.T01 | AT3G43810 | 35.455 | 110 | 67 | 2 | 61 | 166 | 1 | 110 | 8.57e-15 | 67.4 |
MsG0680030476.01.T01 | AT3G43810 | 43.421 | 76 | 43 | 0 | 25 | 100 | 38 | 113 | 4.82e-13 | 62.8 |
MsG0680030476.01.T01 | AT3G43810 | 35.455 | 110 | 67 | 2 | 61 | 166 | 1 | 110 | 8.57e-15 | 67.4 |
MsG0680030476.01.T01 | AT3G43810 | 43.421 | 76 | 43 | 0 | 25 | 100 | 38 | 113 | 4.82e-13 | 62.8 |
MsG0680030476.01.T01 | AT4G14640 | 50.000 | 64 | 32 | 0 | 34 | 97 | 66 | 129 | 3.01e-14 | 66.2 |
MsG0680030476.01.T01 | AT4G14640 | 33.058 | 121 | 77 | 2 | 50 | 166 | 9 | 129 | 4.13e-14 | 65.9 |
MsG0680030476.01.T01 | AT5G37770 | 46.875 | 64 | 34 | 0 | 35 | 98 | 93 | 156 | 3.16e-14 | 67.0 |
MsG0680030476.01.T01 | AT5G37770 | 46.875 | 64 | 34 | 0 | 35 | 98 | 93 | 156 | 3.16e-14 | 67.0 |
MsG0680030476.01.T01 | AT1G18210 | 31.618 | 136 | 85 | 3 | 35 | 166 | 22 | 153 | 6.43e-14 | 66.2 |
MsG0680030476.01.T01 | AT1G18210 | 42.857 | 63 | 36 | 0 | 36 | 98 | 92 | 154 | 3.56e-11 | 58.9 |
MsG0680030476.01.T01 | AT1G18210 | 31.618 | 136 | 85 | 3 | 35 | 166 | 22 | 153 | 6.43e-14 | 66.2 |
MsG0680030476.01.T01 | AT1G18210 | 42.857 | 63 | 36 | 0 | 36 | 98 | 92 | 154 | 3.56e-11 | 58.9 |
MsG0680030476.01.T01 | AT5G23580 | 35.294 | 136 | 81 | 4 | 37 | 168 | 328 | 460 | 9.77e-14 | 68.6 |
MsG0680030476.01.T01 | AT1G73630 | 29.787 | 141 | 91 | 3 | 30 | 166 | 14 | 150 | 1.18e-13 | 65.5 |
MsG0680030476.01.T01 | AT1G62820 | 28.082 | 146 | 99 | 3 | 25 | 166 | 2 | 145 | 3.68e-13 | 63.9 |
MsG0680030476.01.T01 | AT2G41100 | 35.000 | 100 | 62 | 1 | 20 | 119 | 50 | 146 | 3.97e-13 | 64.7 |
MsG0680030476.01.T01 | AT2G41100 | 36.264 | 91 | 55 | 1 | 29 | 119 | 5 | 92 | 4.13e-13 | 63.5 |
MsG0680030476.01.T01 | AT1G12310 | 28.082 | 146 | 99 | 3 | 25 | 166 | 2 | 145 | 4.26e-13 | 63.9 |
MsG0680030476.01.T01 | AT3G51920 | 34.043 | 94 | 62 | 0 | 29 | 122 | 5 | 98 | 8.14e-13 | 63.2 |
MsG0680030476.01.T01 | AT2G41090 | 29.167 | 144 | 95 | 3 | 27 | 166 | 3 | 143 | 8.86e-13 | 63.9 |
MsG0680030476.01.T01 | AT2G41100 | 35.000 | 100 | 62 | 1 | 20 | 119 | 140 | 236 | 1.47e-12 | 64.3 |
MsG0680030476.01.T01 | AT2G41100 | 28.931 | 159 | 92 | 4 | 29 | 166 | 59 | 217 | 3.49e-11 | 60.5 |
MsG0680030476.01.T01 | AT2G41100 | 35.000 | 100 | 62 | 1 | 20 | 119 | 140 | 236 | 1.47e-12 | 64.3 |
MsG0680030476.01.T01 | AT2G41100 | 28.931 | 159 | 92 | 4 | 29 | 166 | 59 | 217 | 3.49e-11 | 60.5 |
MsG0680030476.01.T01 | AT2G41100 | 35.000 | 100 | 62 | 1 | 20 | 119 | 140 | 236 | 1.47e-12 | 64.3 |
MsG0680030476.01.T01 | AT2G41100 | 28.931 | 159 | 92 | 4 | 29 | 166 | 59 | 217 | 3.49e-11 | 60.5 |
MsG0680030476.01.T01 | AT3G59440 | 28.472 | 144 | 96 | 4 | 36 | 173 | 51 | 193 | 1.61e-12 | 63.2 |
MsG0680030476.01.T01 | AT2G41100 | 35.000 | 100 | 62 | 1 | 20 | 119 | 175 | 271 | 1.98e-12 | 64.3 |
MsG0680030476.01.T01 | AT2G41100 | 28.931 | 159 | 92 | 4 | 29 | 166 | 94 | 252 | 4.40e-11 | 60.5 |
MsG0680030476.01.T01 | AT2G41100 | 35.000 | 100 | 62 | 1 | 20 | 119 | 175 | 271 | 1.98e-12 | 64.3 |
MsG0680030476.01.T01 | AT2G41100 | 28.931 | 159 | 92 | 4 | 29 | 166 | 94 | 252 | 4.40e-11 | 60.5 |
MsG0680030476.01.T01 | AT5G42380 | 27.206 | 136 | 94 | 3 | 36 | 166 | 49 | 184 | 2.04e-12 | 62.8 |
MsG0680030476.01.T01 | AT4G09570 | 32.593 | 135 | 86 | 4 | 37 | 168 | 331 | 463 | 3.44e-12 | 63.9 |
MsG0680030476.01.T01 | AT2G17290 | 31.852 | 135 | 87 | 3 | 37 | 168 | 391 | 523 | 3.59e-12 | 63.9 |
MsG0680030476.01.T01 | AT2G17290 | 31.852 | 135 | 87 | 3 | 37 | 168 | 391 | 523 | 3.59e-12 | 63.9 |
MsG0680030476.01.T01 | AT4G35310 | 30.769 | 143 | 94 | 3 | 29 | 168 | 395 | 535 | 1.08e-11 | 62.8 |
MsG0680030476.01.T01 | AT4G35310 | 30.769 | 143 | 94 | 3 | 29 | 168 | 395 | 535 | 1.08e-11 | 62.8 |
MsG0680030476.01.T01 | AT1G35670 | 31.852 | 135 | 87 | 4 | 37 | 168 | 332 | 464 | 1.09e-11 | 62.8 |
MsG0680030476.01.T01 | AT1G66400 | 42.857 | 63 | 36 | 0 | 35 | 97 | 89 | 151 | 1.78e-11 | 59.7 |
MsG0680030476.01.T01 | AT1G66400 | 29.936 | 157 | 100 | 5 | 22 | 170 | 3 | 157 | 3.50e-11 | 58.9 |
MsG0680030476.01.T01 | AT5G19360 | 32.609 | 138 | 83 | 4 | 37 | 168 | 374 | 507 | 2.16e-11 | 61.6 |
MsG0680030476.01.T01 | AT3G20410 | 34.058 | 138 | 81 | 5 | 35 | 166 | 395 | 528 | 3.02e-11 | 61.2 |
MsG0680030476.01.T01 | AT3G20410 | 34.058 | 138 | 81 | 5 | 35 | 166 | 395 | 528 | 3.02e-11 | 61.2 |
MsG0680030476.01.T01 | AT5G12180 | 31.884 | 138 | 84 | 4 | 37 | 168 | 379 | 512 | 3.63e-11 | 61.2 |
MsG0680030476.01.T01 | AT3G03000 | 40.000 | 70 | 42 | 0 | 30 | 99 | 88 | 157 | 5.11e-11 | 58.5 |
MsG0680030476.01.T01 | AT4G04710 | 32.680 | 153 | 75 | 5 | 29 | 166 | 330 | 469 | 6.36e-11 | 60.5 |
MsG0680030476.01.T01 | AT4G04710 | 32.680 | 153 | 75 | 5 | 29 | 166 | 343 | 482 | 7.19e-11 | 60.1 |
MsG0680030476.01.T01 | AT4G04710 | 32.680 | 153 | 75 | 5 | 29 | 166 | 316 | 455 | 8.73e-11 | 60.1 |
Find 42 sgRNAs with CRISPR-Local
Find 168 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AGTGTCCCTTTCTCCTATTT+TGG | 0.263316 | 6:-3441023 | None:intergenic |
ACTGTGGTAACTTACTATTT+TGG | 0.296930 | 6:-3441256 | None:intergenic |
TATCAGTCATCTATACTTAG+AGG | 0.369587 | 6:+3440302 | MsG0680030476.01.T01:CDS |
CACATGATGACGGCCAAAAT+AGG | 0.383388 | 6:+3441010 | MsG0680030476.01.T01:CDS |
TCTTATCTTTGCAGGGCCCT+TGG | 0.389631 | 6:+3440636 | MsG0680030476.01.T01:intron |
TAAATTGTGCATTGTTGATT+GGG | 0.392108 | 6:-3442928 | None:intergenic |
ATAAATTGTGCATTGTTGAT+TGG | 0.407288 | 6:-3442929 | None:intergenic |
TTGTGCTATGTGCAAATTGT+AGG | 0.412129 | 6:+3442808 | MsG0680030476.01.T01:three_prime_UTR |
ACTAGTGACGGAAGCTTGTT+CGG | 0.446170 | 6:-3442710 | None:intergenic |
TTTAGGTACTATTGATGCTA+AGG | 0.461188 | 6:+3440520 | MsG0680030476.01.T01:intron |
ATCATCATGACGAATTCCTC+GGG | 0.465354 | 6:-3442684 | None:intergenic |
CTATACTTAGAGGGGAGTCC+AGG | 0.471234 | 6:+3440312 | MsG0680030476.01.T01:CDS |
GACGGCCAAAATAGGAGAAA+GGG | 0.511185 | 6:+3441018 | MsG0680030476.01.T01:CDS |
CATCATCATGACGAATTCCT+CGG | 0.513311 | 6:-3442685 | None:intergenic |
TTTGAATTATTCGATACTGA+TGG | 0.525178 | 6:+3440405 | MsG0680030476.01.T01:CDS |
TTGATCTCTTGTCTCTTCTG+AGG | 0.531717 | 6:-3440375 | None:intergenic |
TTATTCGATACTGATGGCTC+AGG | 0.532150 | 6:+3440411 | MsG0680030476.01.T01:CDS |
TCAGAAGAGACAAGAGATCA+AGG | 0.536774 | 6:+3440377 | MsG0680030476.01.T01:CDS |
TGACGGCCAAAATAGGAGAA+AGG | 0.541025 | 6:+3441017 | MsG0680030476.01.T01:CDS |
ATCAGTCATCTATACTTAGA+GGG | 0.541592 | 6:+3440303 | MsG0680030476.01.T01:CDS |
GTCTCTTCTGAGGCGTCAAG+TGG | 0.545606 | 6:-3440365 | None:intergenic |
CTTCTGTCATCTCAAATCCA+AGG | 0.552042 | 6:-3440653 | None:intergenic |
AGGAGAAAGGGACACTAAAG+AGG | 0.561951 | 6:+3441030 | MsG0680030476.01.T01:CDS |
TGAGCAAATGATAGCAGATG+TGG | 0.566216 | 6:+3440946 | MsG0680030476.01.T01:CDS |
CTAAGTATAGATGACTGATA+CGG | 0.566728 | 6:-3440299 | None:intergenic |
TTCTGTCATCTCAAATCCAA+GGG | 0.567600 | 6:-3440652 | None:intergenic |
TGATAGAGAGATTCAAGAGA+TGG | 0.573307 | 6:+3441225 | MsG0680030476.01.T01:CDS |
ATAGCAGATGTGGACAAGGA+TGG | 0.577884 | 6:+3440956 | MsG0680030476.01.T01:CDS |
ATAACACAATCTCATAACAT+TGG | 0.581534 | 6:-3442874 | None:intergenic |
ACTAGTCAGTCATATGTACA+TGG | 0.592325 | 6:+3442727 | MsG0680030476.01.T01:exon |
TACATATGACTGACTAGTGA+CGG | 0.596575 | 6:-3442722 | None:intergenic |
GATGTGGACAAGGATGGAAG+TGG | 0.608559 | 6:+3440962 | MsG0680030476.01.T01:CDS |
TGGATTTGAGATGACAGAAG+AGG | 0.613258 | 6:+3440656 | MsG0680030476.01.T01:CDS |
ACAACATGCAGATGATCGTG+AGG | 0.638119 | 6:+3442656 | MsG0680030476.01.T01:intron |
AATGATAGCAGATGTGGACA+AGG | 0.645238 | 6:+3440952 | MsG0680030476.01.T01:CDS |
TGATCGTGAGGTTGACCCCG+AGG | 0.649240 | 6:+3442668 | MsG0680030476.01.T01:CDS |
TACTTAGAGGGGAGTCCAGG+AGG | 0.655241 | 6:+3440315 | MsG0680030476.01.T01:CDS |
TCAGTCATCTATACTTAGAG+GGG | 0.660997 | 6:+3440304 | MsG0680030476.01.T01:CDS |
AAATAGAGTGAAGCAGACAA+AGG | 0.662582 | 6:-3442760 | None:intergenic |
TGAATTTGAGCACATGATGA+CGG | 0.665935 | 6:+3441000 | MsG0680030476.01.T01:CDS |
AGGAGCTGAATGTTGCCATG+AGG | 0.727665 | 6:+3440540 | MsG0680030476.01.T01:CDS |
TCATCATGACGAATTCCTCG+GGG | 0.759865 | 6:-3442683 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTGAAATTATATCTTTTTAT+CGG | + | Chr6:3441588-3441607 | MsG0680030476.01.T01:intron | 10.0% |
!! | AAATTAAAACAATAAAAAGG+AGG | - | Chr6:3440746-3440765 | None:intergenic | 15.0% |
!! | AATTAAAACAATAAAAAGGA+GGG | - | Chr6:3440745-3440764 | None:intergenic | 15.0% |
!!! | ATTATGATTTTCTCATATTT+TGG | + | Chr6:3442560-3442579 | MsG0680030476.01.T01:intron | 15.0% |
!!! | TTAATTTTAACATTTAGCTT+TGG | + | Chr6:3440759-3440778 | MsG0680030476.01.T01:intron | 15.0% |
!! | AATTATCAACAATCAAACAT+AGG | - | Chr6:3442591-3442610 | None:intergenic | 20.0% |
!! | ATTAAAACAATAAAAAGGAG+GGG | - | Chr6:3440744-3440763 | None:intergenic | 20.0% |
!! | CAAAAATTATCCTTAAATGA+GGG | - | Chr6:3441621-3441640 | None:intergenic | 20.0% |
!! | TAAAAATATCTCACATACAT+TGG | - | Chr6:3442618-3442637 | None:intergenic | 20.0% |
!! | TAAAGATTAAAGTGAATAAC+AGG | + | Chr6:3441733-3441752 | MsG0680030476.01.T01:intron | 20.0% |
!! | TATAGAACTATAACAAAGAA+TGG | - | Chr6:3440883-3440902 | None:intergenic | 20.0% |
!!! | AGGTATTGTTTTTATTCATA+AGG | + | Chr6:3440560-3440579 | MsG0680030476.01.T01:intron | 20.0% |
!!! | ATATTTTTACGCAACATTTT+TGG | + | Chr6:3442629-3442648 | MsG0680030476.01.T01:intron | 20.0% |
!!! | TAATTTTTGGTCAATATCTT+TGG | + | Chr6:3441632-3441651 | MsG0680030476.01.T01:intron | 20.0% |
!!! | TTTTAGGTAAAATTTAAGTG+TGG | - | Chr6:3442288-3442307 | None:intergenic | 20.0% |
!!! | TTTTGTCTTGATCAATAATA+TGG | - | Chr6:3441072-3441091 | None:intergenic | 20.0% |
! | ACTAAAAAAAAGAGTTACCA+AGG | - | Chr6:3441287-3441306 | None:intergenic | 25.0% |
! | ATAAATTGTGCATTGTTGAT+TGG | - | Chr6:3442932-3442951 | None:intergenic | 25.0% |
! | ATAACACAATCTCATAACAT+TGG | - | Chr6:3442877-3442896 | None:intergenic | 25.0% |
! | CCAAAAATTATCCTTAAATG+AGG | - | Chr6:3441622-3441641 | None:intergenic | 25.0% |
! | GTTAGTCAATATGTAAAGTA+GGG | + | Chr6:3442050-3442069 | MsG0680030476.01.T01:intron | 25.0% |
! | TGAATAAAAACAATACCTCA+TGG | - | Chr6:3440558-3440577 | None:intergenic | 25.0% |
! | TGTTAGTCAATATGTAAAGT+AGG | + | Chr6:3442049-3442068 | MsG0680030476.01.T01:intron | 25.0% |
! | TTTGAATTATTCGATACTGA+TGG | + | Chr6:3440405-3440424 | MsG0680030476.01.T01:CDS | 25.0% |
!! | AAAGTCGAAGTATTACATAA+AGG | - | Chr6:3440493-3440512 | None:intergenic | 25.0% |
!! | AAGTCGAAGTATTACATAAA+GGG | - | Chr6:3440492-3440511 | None:intergenic | 25.0% |
!! | CCTCATTTAAGGATAATTTT+TGG | + | Chr6:3441619-3441638 | MsG0680030476.01.T01:intron | 25.0% |
!! | TAAATTGTGCATTGTTGATT+GGG | - | Chr6:3442931-3442950 | None:intergenic | 25.0% |
!! | TTTACATATTGACTAACATC+AGG | - | Chr6:3442047-3442066 | None:intergenic | 25.0% |
!!! | GTATTTTTGAATGATTACGT+AGG | + | Chr6:3442000-3442019 | MsG0680030476.01.T01:intron | 25.0% |
AAAGTAGGGTAGGATAATAT+GGG | + | Chr6:3442064-3442083 | MsG0680030476.01.T01:intron | 30.0% | |
AACATACATCTTATCTTTGC+AGG | + | Chr6:3440628-3440647 | MsG0680030476.01.T01:intron | 30.0% | |
AATCATTCAAAAATACCCCT+AGG | - | Chr6:3441996-3442015 | None:intergenic | 30.0% | |
AATTATCCTTAAATGAGGGA+AGG | - | Chr6:3441617-3441636 | None:intergenic | 30.0% | |
AATTTATCGTACAGCAAACA+TGG | - | Chr6:3442472-3442491 | None:intergenic | 30.0% | |
ACATACATCTTATCTTTGCA+GGG | + | Chr6:3440629-3440648 | MsG0680030476.01.T01:intron | 30.0% | |
ATCAGTCATCTATACTTAGA+GGG | + | Chr6:3440303-3440322 | MsG0680030476.01.T01:CDS | 30.0% | |
ATTATCCTTAAATGAGGGAA+GGG | - | Chr6:3441616-3441635 | None:intergenic | 30.0% | |
ATTGCATTATGTAGTGAACT+GGG | + | Chr6:3441338-3441357 | MsG0680030476.01.T01:intron | 30.0% | |
CTAAGTATAGATGACTGATA+CGG | - | Chr6:3440302-3440321 | None:intergenic | 30.0% | |
CTTTCAAAGCAGAAAAATAC+AGG | - | Chr6:3441443-3441462 | None:intergenic | 30.0% | |
GAAGCAAACTAATGATGTAT+AGG | - | Chr6:3441112-3441131 | None:intergenic | 30.0% | |
TAAAGTAGGGTAGGATAATA+TGG | + | Chr6:3442063-3442082 | MsG0680030476.01.T01:intron | 30.0% | |
TATCAGTCATCTATACTTAG+AGG | + | Chr6:3440302-3440321 | MsG0680030476.01.T01:CDS | 30.0% | |
TATTGCATTATGTAGTGAAC+TGG | + | Chr6:3441337-3441356 | MsG0680030476.01.T01:intron | 30.0% | |
TGACTATATTGTGACTTTGA+TGG | - | Chr6:3440455-3440474 | None:intergenic | 30.0% | |
TGAGATATAGAGTGATCTAA+GGG | - | Chr6:3442253-3442272 | None:intergenic | 30.0% | |
TTTAGGTACTATTGATGCTA+AGG | + | Chr6:3440520-3440539 | MsG0680030476.01.T01:intron | 30.0% | |
! | ACTGTGGTAACTTACTATTT+TGG | - | Chr6:3441259-3441278 | None:intergenic | 30.0% |
! | AGTCGAAGTATTACATAAAG+GGG | - | Chr6:3440491-3440510 | None:intergenic | 30.0% |
! | CTTCGACTTTGATGAATTTT+AGG | + | Chr6:3440503-3440522 | MsG0680030476.01.T01:intron | 30.0% |
! | TCAAATAAACAAGAGCACAA+AGG | - | Chr6:3441572-3441591 | None:intergenic | 30.0% |
!! | ATTTGCTCAATTTGCTGAAA+TGG | - | Chr6:3440935-3440954 | None:intergenic | 30.0% |
!! | TTCAAACTAAAGTGTTGCAT+CGG | + | Chr6:3442162-3442181 | MsG0680030476.01.T01:intron | 30.0% |
AAAACAATAAAAAGGAGGGG+TGG | - | Chr6:3440741-3440760 | None:intergenic | 35.0% | |
AAACAATAAAAAGGAGGGGT+GGG | - | Chr6:3440740-3440759 | None:intergenic | 35.0% | |
AAATAGAGTGAAGCAGACAA+AGG | - | Chr6:3442763-3442782 | None:intergenic | 35.0% | |
ACTAGTCAGTCATATGTACA+TGG | + | Chr6:3442727-3442746 | MsG0680030476.01.T01:exon | 35.0% | |
AGTTCAACTAAACCTAACAG+TGG | - | Chr6:3442371-3442390 | None:intergenic | 35.0% | |
ATAAACTATGTGAGACGTAC+AGG | - | Chr6:3441314-3441333 | None:intergenic | 35.0% | |
CAGTGGAAAACAAAGGTAAA+TGG | + | Chr6:3441698-3441717 | MsG0680030476.01.T01:intron | 35.0% | |
GGTAAAATTTAAGTGTGGAG+AGG | - | Chr6:3442283-3442302 | None:intergenic | 35.0% | |
GTCAATATGTAAAGTAGGGT+AGG | + | Chr6:3442054-3442073 | MsG0680030476.01.T01:intron | 35.0% | |
GTCTTATAGGTGGTCTATAA+TGG | - | Chr6:3442430-3442449 | None:intergenic | 35.0% | |
GTGAGATATAGAGTGATCTA+AGG | - | Chr6:3442254-3442273 | None:intergenic | 35.0% | |
TACATATGACTGACTAGTGA+CGG | - | Chr6:3442725-3442744 | None:intergenic | 35.0% | |
TCAGTCATCTATACTTAGAG+GGG | + | Chr6:3440304-3440323 | MsG0680030476.01.T01:CDS | 35.0% | |
TGAATTCCTATCTCCGAATA+AGG | - | Chr6:3440795-3440814 | None:intergenic | 35.0% | |
TGAATTTGAGCACATGATGA+CGG | + | Chr6:3441000-3441019 | MsG0680030476.01.T01:CDS | 35.0% | |
TGAGAGTTAGTGTTTAACCA+TGG | + | Chr6:3441906-3441925 | MsG0680030476.01.T01:intron | 35.0% | |
TGATAGAGAGATTCAAGAGA+TGG | + | Chr6:3441225-3441244 | MsG0680030476.01.T01:CDS | 35.0% | |
TGATTCTCACTGCATATTTG+TGG | + | Chr6:3441136-3441155 | MsG0680030476.01.T01:intron | 35.0% | |
TGCTCACATATGTATACACT+TGG | - | Chr6:3441680-3441699 | None:intergenic | 35.0% | |
TGGTTGTTCTTCTCCTTATT+CGG | + | Chr6:3440779-3440798 | MsG0680030476.01.T01:intron | 35.0% | |
TTACTAGTCAAGGCAGAATA+GGG | + | Chr6:3441837-3441856 | MsG0680030476.01.T01:intron | 35.0% | |
TTCTGTCATCTCAAATCCAA+GGG | - | Chr6:3440655-3440674 | None:intergenic | 35.0% | |
TTGTGCTATGTGCAAATTGT+AGG | + | Chr6:3442808-3442827 | MsG0680030476.01.T01:three_prime_UTR | 35.0% | |
! | ACTAAGGTGGAAAGTCTTAT+AGG | - | Chr6:3442443-3442462 | None:intergenic | 35.0% |
! | AGAATAGGGTGCTAATTAGT+TGG | + | Chr6:3441851-3441870 | MsG0680030476.01.T01:intron | 35.0% |
! | GTCGAAGTATTACATAAAGG+GGG | - | Chr6:3440490-3440509 | None:intergenic | 35.0% |
! | GTGGATTATGTATTAGAGAG+AGG | - | Chr6:3440908-3440927 | None:intergenic | 35.0% |
!! | AATTTGCTGAAATGGCATAG+TGG | - | Chr6:3440927-3440946 | None:intergenic | 35.0% |
!! | CATCGGTTTCATAGTTCTTA+CGG | + | Chr6:3442179-3442198 | MsG0680030476.01.T01:intron | 35.0% |
!! | GGTGGAGATATTTTTGCTTT+AGG | + | Chr6:3441359-3441378 | MsG0680030476.01.T01:intron | 35.0% |
!! | TGTTTTATTGTTGAACCTCC+TGG | - | Chr6:3440333-3440352 | None:intergenic | 35.0% |
!!! | ACCTGGCATTTACACTTTTT+TGG | + | Chr6:3441770-3441789 | MsG0680030476.01.T01:intron | 35.0% |
!!! | CCTGGCATTTACACTTTTTT+GGG | + | Chr6:3441771-3441790 | MsG0680030476.01.T01:intron | 35.0% |
AACAATAAAAAGGAGGGGTG+GGG | - | Chr6:3440739-3440758 | None:intergenic | 40.0% | |
AATGATAGCAGATGTGGACA+AGG | + | Chr6:3440952-3440971 | MsG0680030476.01.T01:CDS | 40.0% | |
AGGTTTACAACCATATCACC+TGG | + | Chr6:3441753-3441772 | MsG0680030476.01.T01:intron | 40.0% | |
AGTCACTATTTCCTACACGA+TGG | - | Chr6:3441542-3441561 | None:intergenic | 40.0% | |
AGTGTAAATGCCAGGTGATA+TGG | - | Chr6:3441766-3441785 | None:intergenic | 40.0% | |
AGTTACCAAGGATATGACTG+TGG | - | Chr6:3441275-3441294 | None:intergenic | 40.0% | |
AGTTACCACAGTCATATCCT+TGG | + | Chr6:3441267-3441286 | MsG0680030476.01.T01:intron | 40.0% | |
ATACGGAAATTGCACGTCAA+GGG | - | Chr6:3440285-3440304 | None:intergenic | 40.0% | |
ATCATCATGACGAATTCCTC+GGG | - | Chr6:3442687-3442706 | None:intergenic | 40.0% | |
ATGTATACACTTGGCAGTAG+TGG | - | Chr6:3441671-3441690 | None:intergenic | 40.0% | |
ATGTGAGCAGTGGAAAACAA+AGG | + | Chr6:3441691-3441710 | MsG0680030476.01.T01:intron | 40.0% | |
ATTCGGAGATAGGAATTCAG+TGG | + | Chr6:3440796-3440815 | MsG0680030476.01.T01:intron | 40.0% | |
CAAAACACATGATGTGGTGT+TGG | + | Chr6:3441796-3441815 | MsG0680030476.01.T01:intron | 40.0% | |
CACTAGTCAGTTACTAGTCA+AGG | + | Chr6:3441827-3441846 | MsG0680030476.01.T01:intron | 40.0% | |
CATCATCATGACGAATTCCT+CGG | - | Chr6:3442688-3442707 | None:intergenic | 40.0% | |
CTTCTGTCATCTCAAATCCA+AGG | - | Chr6:3440656-3440675 | None:intergenic | 40.0% | |
GTGTATACATATGTGAGCAG+TGG | + | Chr6:3441681-3441700 | MsG0680030476.01.T01:intron | 40.0% | |
GTTACTAGTCAAGGCAGAAT+AGG | + | Chr6:3441836-3441855 | MsG0680030476.01.T01:intron | 40.0% | |
TCAGAAGAGACAAGAGATCA+AGG | + | Chr6:3440377-3440396 | MsG0680030476.01.T01:CDS | 40.0% | |
TCTTCTCCTTATTCGGAGAT+AGG | + | Chr6:3440786-3440805 | MsG0680030476.01.T01:intron | 40.0% | |
TGAGCAAATGATAGCAGATG+TGG | + | Chr6:3440946-3440965 | MsG0680030476.01.T01:CDS | 40.0% | |
TGCATATTTGTGGTCATTGC+AGG | + | Chr6:3441146-3441165 | MsG0680030476.01.T01:intron | 40.0% | |
TGGGTACAAAACACATGATG+TGG | + | Chr6:3441790-3441809 | MsG0680030476.01.T01:intron | 40.0% | |
TGTATACACTTGGCAGTAGT+GGG | - | Chr6:3441670-3441689 | None:intergenic | 40.0% | |
TTATTCGATACTGATGGCTC+AGG | + | Chr6:3440411-3440430 | MsG0680030476.01.T01:CDS | 40.0% | |
TTGATCTCTTGTCTCTTCTG+AGG | - | Chr6:3440378-3440397 | None:intergenic | 40.0% | |
! | AAACAAGAGCACAAAGGCAA+AGG | - | Chr6:3441566-3441585 | None:intergenic | 40.0% |
! | AAGGTGGAAAGTCTTATAGG+TGG | - | Chr6:3442440-3442459 | None:intergenic | 40.0% |
! | AGTGTCCCTTTCTCCTATTT+TGG | - | Chr6:3441026-3441045 | None:intergenic | 40.0% |
! | CCCAAAAAAGTGTAAATGCC+AGG | - | Chr6:3441774-3441793 | None:intergenic | 40.0% |
! | TGGATTTGAGATGACAGAAG+AGG | + | Chr6:3440656-3440675 | MsG0680030476.01.T01:CDS | 40.0% |
ACAACATGCAGATGATCGTG+AGG | + | Chr6:3442656-3442675 | MsG0680030476.01.T01:intron | 45.0% | |
AGGAGAAAGGGACACTAAAG+AGG | + | Chr6:3441030-3441049 | MsG0680030476.01.T01:CDS | 45.0% | |
ATAGCAGATGTGGACAAGGA+TGG | + | Chr6:3440956-3440975 | MsG0680030476.01.T01:CDS | 45.0% | |
CAAGCGCATTGCAAAAAGCT+TGG | + | Chr6:3441190-3441209 | MsG0680030476.01.T01:CDS | 45.0% | |
CTAACAGTGGATGCTCTTCA+TGG | - | Chr6:3442358-3442377 | None:intergenic | 45.0% | |
GACGGCCAAAATAGGAGAAA+GGG | + | Chr6:3441018-3441037 | MsG0680030476.01.T01:CDS | 45.0% | |
GATACGGAAATTGCACGTCA+AGG | - | Chr6:3440286-3440305 | None:intergenic | 45.0% | |
GCATTATGTAGTGAACTGGG+TGG | + | Chr6:3441341-3441360 | MsG0680030476.01.T01:intron | 45.0% | |
GTAGGGTAGGATAATATGGG+TGG | + | Chr6:3442067-3442086 | MsG0680030476.01.T01:intron | 45.0% | |
TCATCATGACGAATTCCTCG+GGG | - | Chr6:3442686-3442705 | None:intergenic | 45.0% | |
TGACGGCCAAAATAGGAGAA+AGG | + | Chr6:3441017-3441036 | MsG0680030476.01.T01:CDS | 45.0% | |
! | AACATGGACTGCAACTAAGG+TGG | - | Chr6:3442456-3442475 | None:intergenic | 45.0% |
! | ACTAGTGACGGAAGCTTGTT+CGG | - | Chr6:3442713-3442732 | None:intergenic | 45.0% |
! | GATTTTCGGTGGTCATTTGG+TGG | - | Chr6:3442311-3442330 | None:intergenic | 45.0% |
! | GCAAACATGGACTGCAACTA+AGG | - | Chr6:3442459-3442478 | None:intergenic | 45.0% |
!! | CACATGATGACGGCCAAAAT+AGG | + | Chr6:3441010-3441029 | MsG0680030476.01.T01:CDS | 45.0% |
!! | CATGAAGAGCATCCACTGTT+AGG | + | Chr6:3442356-3442375 | MsG0680030476.01.T01:intron | 45.0% |
!! | GGTGGTCATTTGGTGGTTTT+AGG | - | Chr6:3442304-3442323 | None:intergenic | 45.0% |
!! | TTAAAATTAAAACAATAAAA+AGG | - | Chr6:3440749-3440768 | None:intergenic | 5.0% |
AACATCGTCACCAGACCCAT+AGG | - | Chr6:3441959-3441978 | None:intergenic | 50.0% | |
AGGAGCTGAATGTTGCCATG+AGG | + | Chr6:3440540-3440559 | MsG0680030476.01.T01:CDS | 50.0% | |
ATGACCACCGAAAATCGCCA+TGG | + | Chr6:3442315-3442334 | MsG0680030476.01.T01:intron | 50.0% | |
CTATACTTAGAGGGGAGTCC+AGG | + | Chr6:3440312-3440331 | MsG0680030476.01.T01:CDS | 50.0% | |
GATGTGGACAAGGATGGAAG+TGG | + | Chr6:3440962-3440981 | MsG0680030476.01.T01:CDS | 50.0% | |
TCTTATCTTTGCAGGGCCCT+TGG | + | Chr6:3440636-3440655 | MsG0680030476.01.T01:intron | 50.0% | |
TGCGCGAGTATTCACATCCA+TGG | - | Chr6:3441926-3441945 | None:intergenic | 50.0% | |
TGTTAGCAGAGCCATCGTGT+AGG | + | Chr6:3441528-3441547 | MsG0680030476.01.T01:intron | 50.0% | |
! | GGAAAGGCCATGGCGATTTT+CGG | - | Chr6:3442325-3442344 | None:intergenic | 50.0% |
! | GGCGATTTTCGGTGGTCATT+TGG | - | Chr6:3442314-3442333 | None:intergenic | 50.0% |
CGGCTCCCTTCCCTCATTTA+AGG | + | Chr6:3441608-3441627 | MsG0680030476.01.T01:intron | 55.0% | |
CTGGTCTCATCCTATGGGTC+TGG | + | Chr6:3441946-3441965 | MsG0680030476.01.T01:intron | 55.0% | |
GGATGTGAATACTCGCGCAC+TGG | + | Chr6:3441927-3441946 | MsG0680030476.01.T01:intron | 55.0% | |
GTGGATGCTCTTCATGGTGC+CGG | - | Chr6:3442352-3442371 | None:intergenic | 55.0% | |
TACTTAGAGGGGAGTCCAGG+AGG | + | Chr6:3440315-3440334 | MsG0680030476.01.T01:CDS | 55.0% | |
TGACGATGTTCCGGCAATGG+CGG | + | Chr6:3441969-3441988 | MsG0680030476.01.T01:intron | 55.0% | |
! | AAGGCCATGGCGATTTTCGG+TGG | - | Chr6:3442322-3442341 | None:intergenic | 55.0% |
! | GCGCACTGGTCTCATCCTAT+GGG | + | Chr6:3441941-3441960 | MsG0680030476.01.T01:intron | 55.0% |
! | TGGGTCTGGTGACGATGTTC+CGG | + | Chr6:3441960-3441979 | MsG0680030476.01.T01:intron | 55.0% |
! | TGGTGACGATGTTCCGGCAA+TGG | + | Chr6:3441966-3441985 | MsG0680030476.01.T01:intron | 55.0% |
!! | GTCTCTTCTGAGGCGTCAAG+TGG | - | Chr6:3440368-3440387 | None:intergenic | 55.0% |
TGATCGTGAGGTTGACCCCG+AGG | + | Chr6:3442668-3442687 | MsG0680030476.01.T01:CDS | 60.0% | |
! | CGCGCACTGGTCTCATCCTA+TGG | + | Chr6:3441940-3441959 | MsG0680030476.01.T01:intron | 60.0% |
!! | TCATGGTGCCGGCAGAGGAA+AGG | - | Chr6:3442341-3442360 | None:intergenic | 60.0% |
!! | TTCCGGCAATGGCGGACCTA+GGG | + | Chr6:3441977-3441996 | MsG0680030476.01.T01:intron | 60.0% |
ACCCCTAGGTCCGCCATTGC+CGG | - | Chr6:3441982-3442001 | None:intergenic | 65.0% | |
CGCCATGGCCTTTCCTCTGC+CGG | + | Chr6:3442330-3442349 | MsG0680030476.01.T01:intron | 65.0% | |
TGCCGGCAGAGGAAAGGCCA+TGG | - | Chr6:3442335-3442354 | None:intergenic | 65.0% | |
!! | GCTCTTCATGGTGCCGGCAG+AGG | - | Chr6:3442346-3442365 | None:intergenic | 65.0% |
!! | GTTCCGGCAATGGCGGACCT+AGG | + | Chr6:3441976-3441995 | MsG0680030476.01.T01:intron | 65.0% |
!! | TCCGGCAATGGCGGACCTAG+GGG | + | Chr6:3441978-3441997 | MsG0680030476.01.T01:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr6 | gene | 3440285 | 3442955 | 3440285 | ID=MsG0680030476.01;Name=MsG0680030476.01 |
Chr6 | mRNA | 3440285 | 3442955 | 3440285 | ID=MsG0680030476.01.T01;Parent=MsG0680030476.01;Name=MsG0680030476.01.T01;_AED=0.50;_eAED=0.51;_QI=0|0.8|0.66|1|0.6|0.5|6|224|173 |
Chr6 | exon | 3440285 | 3440432 | 3440285 | ID=MsG0680030476.01.T01:exon:3316;Parent=MsG0680030476.01.T01 |
Chr6 | exon | 3440525 | 3440561 | 3440525 | ID=MsG0680030476.01.T01:exon:3317;Parent=MsG0680030476.01.T01 |
Chr6 | exon | 3440650 | 3440677 | 3440650 | ID=MsG0680030476.01.T01:exon:3318;Parent=MsG0680030476.01.T01 |
Chr6 | exon | 3440941 | 3441093 | 3440941 | ID=MsG0680030476.01.T01:exon:3319;Parent=MsG0680030476.01.T01 |
Chr6 | exon | 3441173 | 3441263 | 3441173 | ID=MsG0680030476.01.T01:exon:3320;Parent=MsG0680030476.01.T01 |
Chr6 | exon | 3442667 | 3442955 | 3442667 | ID=MsG0680030476.01.T01:exon:3321;Parent=MsG0680030476.01.T01 |
Chr6 | CDS | 3440285 | 3440432 | 3440285 | ID=MsG0680030476.01.T01:cds;Parent=MsG0680030476.01.T01 |
Chr6 | CDS | 3440525 | 3440561 | 3440525 | ID=MsG0680030476.01.T01:cds;Parent=MsG0680030476.01.T01 |
Chr6 | CDS | 3440650 | 3440677 | 3440650 | ID=MsG0680030476.01.T01:cds;Parent=MsG0680030476.01.T01 |
Chr6 | CDS | 3440941 | 3441093 | 3440941 | ID=MsG0680030476.01.T01:cds;Parent=MsG0680030476.01.T01 |
Chr6 | CDS | 3441173 | 3441263 | 3441173 | ID=MsG0680030476.01.T01:cds;Parent=MsG0680030476.01.T01 |
Chr6 | CDS | 3442667 | 3442731 | 3442667 | ID=MsG0680030476.01.T01:cds;Parent=MsG0680030476.01.T01 |
Chr6 | three_prime_UTR | 3442732 | 3442955 | 3442732 | ID=MsG0680030476.01.T01:three_prime_utr;Parent=MsG0680030476.01.T01 |
Gene Sequence |
Protein sequence |